Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0008749

Physical Location & Seq

Genomic Coordinates Forward (+)

1711346 .. 1718761

Gene Structure 7416 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00334400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2145 bp

ATGGGAGCGGTGCCGTCGACGCCGCGCTGGGGGAGTAGCTCCGCGGCGCGTCCGCTGGAAACGGCGGAGTATCTGATCGGGACCTTCGTAGGCGACGAGTCGTTTCCTTTGTCCTCTGATTACTGGCAGAAATTGCTTGACCTCCCTCTCAGTCTCCAATGGCCTCCTGACCGCGTTCAACAAGCTTGCGAGGCTCTTGGGGTATCCAATGATTCCTCACAAAACAACTACAAAACCAGGCATCTTGCAAAGCTTCTGATCCATCTGGCATGGTGTTTACAAGAAGCTATTTCAACTTCTGGTGGCCCTTCTCTTGTTTATGGGAAGGCTGTTAATGCAGTGTACATCTCATCTGTCTTTTTAAAGTACTTAATTGAAAATCCAAAAAGCGACAAGATTGAAGAGTTGTACTTATCTCTAGATGAAAGTGAGCCAATGCCTACTGATATTACAAGAGATCTAAACATCGAGGATTTTGTAATGTGTAGTGTGCTTACCTTTATTGGATCAATAGATGTAAGTCCTGGTACATACCTCCTTCATTTGGAACTGCTTAACTTCATGCTGATTGCAATGTCAACTCAGCTTCTTTCTGGGCCTTCCCCAGGACCAGAAGATGTGAACCCATTTCTTGATGCAGCAATGTCTCAGGAAAGCTCATTGGTTATCTCGGTTGTTCGTAGACTGCTACTCAATTACATCACTGGACCTTCGATACCCCTGAATAGTGCATCTTATTCTATATTTTCTGAAGGAAGCCAGCCTGGTGTTATACAAAGAGTTAGTTCTGCAGCAGCAAATTTGATGTTATTACCATTCAACTTTCTCGTCAGTTCAAGTGGTGAAGGCTCAAGAAGTCTTTTGGCCGACTGCAGTCTCCATGTGCTACTTATTCTCACTCATTATCACAAATGTGTTGTGGGCAACGAGCCAATAACAGATACAAGTATTGACACCACCACTTCAAATTCACTTTTGAAAGGGAGTAGATATTTTTCTGACAACCCTTACTGCAAGGCCTTGGAACATGCAACAGATGTTGAATTTGATCGTGTAGATACTGAGGGTAATGCACATGGTGGCCCAGTTTTGAGGCTACCTTTTGCTTCCCTGTTCGATACCCTTGGAATGTACTTGTCTGATGAGGCTGCTGCAGTTTTGCTTTACTCTTTATTGCAAGGAAATGCTGACTTTCTGGAGTATGTCTTGGTGCGAACTGATTTGGATACGCTGTTGATGCCCATCCTGGAAGCGCTATATGATGCTCCAAAAAGGACATCTAATCAAATCTACATGTTGCTGATCATACTTCTCATACTTAGTCAGGATTCATCTTTTAATGCAAGCATTCACAAATTGATACTTCCTACTGTTCCCTGGTACAAAGAACGTCTCCTCCACCAGACATCTCTTGGTTCATTAATGGTCATTACGCTGATAAGGACAGTGCAGTATAACCTATCTAAGTTGCGGGATGTTTATCTCCATACAACTTGTCTAGCAACTTTGGCAAACATGGCACCTCATGTCCACCGTTTGAGTGCATATGCATCCCAGAGATTGGTCAGCCTATTTGATATGCTCTCTCGGAAGTATAACAAACTAGCAGAGTCAACGGAGATGCATATATATACCGACTTCTTGAGACTTGTCCTTGAAATATTAAATGCAATTTTGACATATGCTCTGCCACGGAATCCTGAGGTTATATATGCGATAATGCACAGGCAGGAAGTATTTCAGCCTTTCAGGAATCATCCACGTTTCAATGAGCTGCTTGAAAACATTTATACAGTATTAGATTTTTTCAATAGTCGTGTGGATGCACAAAGAACAGATGGAGAATGGTCAGTAGAAAAAGTACTTCAAGTCATAATCATTAATTGTAGATCATGGCGTGGTGAAGGGATGAAGATGTTCACCCAGTTGCGCTTCACGTATGAACAAGAGAGTCATCCAGAGGAGTTCTTTATTCCATACTTGTGGCAGCTAGTACTATCCCGCTGTGGAATCAGTTTCAATCGTCGAGCCATAAATTTGTTTCCAATTGATCAACCTTCCGAGAAACAGAGTGATTATGAAGTGGCGTCCGACAATCATGTAAATGGAGAGGTGGCCAAGCATGCAGTCTTTCTTGATCCGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Dymeclin

Protein Analysis

714

Amino Acids

80.3

Weight (kDa)

5.2

Isoelectric Point (pI)

48.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Dymeclin	PF09742	1 - 664	4.6e-187	Dyggve-Melchior-Clausen syndrome protein
Hid1	PF12722	385 - 585	1.5e-17	High-temperature-induced dauer-formation protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008749)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04200 AT1G04200 AT1G04200
fragaria_vesca	FvH4_4g01230 FvH4_4g01230 FvH4_4g01230
malus_domestica	MD13G1199900.v1.1 MD16G1199900.v1.1
prunus_persica	Prupe.1G021300_v2.0.a1
pyrus_communis	pycom13g17340 pycom16g16850
rosa_chinensis	RchiOBHm_Chr4g0387781
rosa_laevigata	RLG00000010096
rosa_multiflora	Rmu_sc0008916.1_g000003 Rmu_sc0013958.1_g000003
rosa_roxburghii	Rroxscaffold_5G00334400
rosa_rugosa	Rorug03G0313100 Rorug03G0313200 Rorug03G0313300
rosa_samantha	Rh4AG018300 Rh4CG019500 Rh4DG014100
rosa_wichuraiana	Rw4G001200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	10, 1519
AccB7I	CCANNNNNTGG	1 cut(s)	1561
AccBSI	CCGCTC	1 cut(s)	8
AccI	GTMKAC	2 cut(s)	17, 682
AccII	CGCG	4 cut(s)	25, 44, 49, 174
AciI	CCGC	9 cut(s)	8, 23, 42, 44, 53, 65, 172, 1471, 2002
AclWI	GGATC	3 cut(s)	253, 514, 2132
AcoI	YGGCCR	2 cut(s)	864, 2115
AcsI	RAATTY	4 cut(s)	799, 967, 1043, 2035
AcuI	CTGAAG	1 cut(s)	771
AcyI	GRCGYC	2 cut(s)	20, 2087
AdeI	CACNNNGTG	1 cut(s)	1079
AfaI	GTAC	8 cut(s)	344, 368, 410, 529, 1133, 1382, 1863, 1995
AfeI	AGCGCT	1 cut(s)	1254
AfiI	CCNNNNNNNGG	4 cut(s)	29, 544, 605, 1561
AflIII	ACRYGT	1 cut(s)	1293
AjnI	CCWGG	6 cut(s)	236, 523, 604, 763, 1245, 1376
AleI	CACNNNNGTG	1 cut(s)	912
AloI	GAACNNNNNNTCC	2 cut(s)	1380, 1412
AluBI	AGCT	8 cut(s)	39, 185, 253, 287, 586, 657, 1774, 1990
AluI	AGCT	8 cut(s)	39, 185, 253, 287, 586, 657, 1774, 1990
Alw26I	GTCTC	5 cut(s)	158, 651, 881, 1397, 1639
AlwI	GGATC	3 cut(s)	253, 514, 2132
Aor51HI	AGCGCT	1 cut(s)	1254
AoxI	GGCC	7 cut(s)	161, 304, 596, 864, 1017, 1081, 2115
ApeKI	GCWGC	7 cut(s)	638, 791, 794, 1148, 1151, 1774, 1987
ApoI	RAATTY	4 cut(s)	799, 967, 1043, 2035
AseI	ATTAAT	2 cut(s)	1421, 1881
Asp700I	GAANNNNTTC	2 cut(s)	1737, 1916
AspLEI	GCGC	4 cut(s)	27, 49, 1255, 1932
AspS9I	GGNCC	6 cut(s)	81, 305, 596, 608, 707, 1082
AsuHPI	GGTGA	3 cut(s)	854, 1912, 1913
AvaII	GGWCC	3 cut(s)	81, 608, 707
AxyI	CCTNAGG	1 cut(s)	1701
BalI	TGGCCA	1 cut(s)	2117
BanI	GGYRCC	2 cut(s)	10, 1519
BbvI	GCAGC	7 cut(s)	650, 803, 806, 1135, 1138, 1761, 1999
BccI	CCATC	3 cut(s)	270, 1250, 1832
BceAI	ACGGC	1 cut(s)	78
BciT130I	CCWGG	6 cut(s)	238, 525, 606, 765, 1247, 1378
BciVI	GTATCC	2 cut(s)	214, 1219
BclI	TGATCA	2 cut(s)	1302, 2050
BcoDI	GTCTC	5 cut(s)	158, 651, 881, 1397, 1639
BfaI	CTAG	4 cut(s)	419, 1499, 1604, 1991
BfmI	CTRYAG	3 cut(s)	789, 871, 1152
BfoI	RGCGCY	1 cut(s)	1256
BfuI	GTATCC	2 cut(s)	214, 1219
BglII	AGATCT	1 cut(s)	457
BisI	GCNGC	9 cut(s)	23, 45, 639, 792, 795, 1149, 1152, 1775, 1988
BlsI	GCNGC	9 cut(s)	24, 46, 640, 793, 796, 1150, 1153, 1776, 1989
BmcAI	AGTACT	3 cut(s)	368, 1863, 1995
Bme1390I	CCNGG	6 cut(s)	238, 525, 606, 765, 1247, 1378
Bme18I	GGWCC	3 cut(s)	81, 608, 707
BmgT120I	GGNCC	6 cut(s)	81, 305, 596, 608, 707, 1082
BmiI	GGNNCC	3 cut(s)	12, 82, 1521
BmrFI	CCNGG	6 cut(s)	238, 525, 606, 765, 1247, 1378
BmrI	ACTGGG	2 cut(s)	1079, 1918
BmsI	GCATC	8 cut(s)	250, 625, 740, 1227, 1252, 1559, 1611, 1813
BmuI	ACTGGG	2 cut(s)	1079, 1918
BoxI	GACNNNNGTC	1 cut(s)	873
BpmI	CTGGAG	1 cut(s)	1217
BpuEI	CTTGAG	2 cut(s)	835, 1663
BsaAI	YACGTR	1 cut(s)	1938
BsaBI	GATNNNNATC	2 cut(s)	1241, 1479
BsaHI	GRCGYC	2 cut(s)	20, 2087
BsaJI	CCNNGG	6 cut(s)	42, 604, 1020, 1123, 1376, 1691
BsaXI	ACNNNNNCTCC	2 cut(s)	1380, 1410
Bsc4I	CCNNNNNNNGG	4 cut(s)	29, 544, 605, 1561
Bse1I	ACTGG	4 cut(s)	128, 709, 1085, 1924
Bse21I	CCTNAGG	1 cut(s)	1701
Bse3DI	GCAATG	2 cut(s)	579, 648
Bse8I	GATNNNNATC	2 cut(s)	1241, 1479
BseBI	CCWGG	6 cut(s)	238, 525, 606, 765, 1247, 1378
BseDI	CCNNGG	6 cut(s)	42, 604, 1020, 1123, 1376, 1691
BseGI	GGATG	7 cut(s)	1242, 1480, 1550, 1756, 1828, 1914, 1954
BseJI	GATNNNNATC	2 cut(s)	1241, 1479
BseLI	CCNNNNNNNGG	4 cut(s)	29, 544, 605, 1561
BseMI	GCAATG	2 cut(s)	579, 648
BseMII	CTCAG	5 cut(s)	163, 596, 662, 1053, 1692
BseNI	ACTGG	4 cut(s)	128, 709, 1085, 1924
BseRI	GAGGAG	2 cut(s)	1385, 1976
BseXI	GCAGC	7 cut(s)	650, 803, 806, 1135, 1138, 1761, 1999
BseYI	CCCAGC	1 cut(s)	27
BsgI	GTGCAG	1 cut(s)	1469
Bsh1236I	CGCG	4 cut(s)	25, 44, 49, 174
BshFI	GGCC	7 cut(s)	163, 306, 598, 866, 1019, 1083, 2117
BshNI	GGYRCC	2 cut(s)	10, 1519
BslFI	GGGAC	1 cut(s)	94
BslI	CCNNNNNNNGG	4 cut(s)	29, 544, 605, 1561
BsmAI	GTCTC	5 cut(s)	158, 651, 881, 1397, 1639
BsmBI	CGTCTC	1 cut(s)	1397
BsmFI	GGGAC	1 cut(s)	94
BsmI	GAATGC	1 cut(s)	1347
BsnI	GGCC	7 cut(s)	163, 306, 598, 866, 1019, 1083, 2117
Bsp1407I	TGTACA	1 cut(s)	342
Bsp143I	GATC	9 cut(s)	75, 258, 457, 506, 1048, 1302, 1889, 2050, 2137
BspACI	CCGC	9 cut(s)	8, 23, 42, 44, 53, 65, 172, 1471, 2002
BspANI	GGCC	7 cut(s)	163, 306, 598, 866, 1019, 1083, 2117
BspCNI	CTCAG	5 cut(s)	162, 595, 661, 1054, 1693
BspFNI	CGCG	4 cut(s)	25, 44, 49, 174
BspLI	GGNNCC	3 cut(s)	12, 82, 1521
BspMAI	CTGCAG	3 cut(s)	793, 875, 1156
BspPI	GGATC	3 cut(s)	253, 514, 2132
BspT107I	GGYRCC	2 cut(s)	10, 1519
BsrBI	CCGCTC	1 cut(s)	8
BsrDI	GCAATG	2 cut(s)	579, 648
BsrGI	TGTACA	1 cut(s)	342
BsrI	ACTGG	4 cut(s)	128, 709, 1085, 1924
BssECI	CCNNGG	6 cut(s)	42, 604, 1020, 1123, 1376, 1691
BssMI	GATC	9 cut(s)	75, 258, 457, 506, 1048, 1302, 1889, 2050, 2137
BssNI	GRCGYC	2 cut(s)	20, 2087
BssT1I	CCWWGG	2 cut(s)	1020, 1123
Bst2UI	CCWGG	6 cut(s)	238, 525, 606, 765, 1247, 1378
Bst4CI	ACNGT	4 cut(s)	1372, 1447, 1535, 1795
Bst6I	CTCTTC	1 cut(s)	396
BstACI	GRCGYC	2 cut(s)	20, 2087
BstAPI	GCANNNNNTGC	1 cut(s)	133
BstAUI	TGTACA	1 cut(s)	342
BstBAI	YACGTR	1 cut(s)	1938
BstC8I	GCNNGC	4 cut(s)	187, 761, 1345, 2124
BstDEI	CTNAG	7 cut(s)	149, 582, 648, 1062, 1319, 1464, 1701
BstDSI	CCRYGG	2 cut(s)	42, 1691
BstENI	CCTNNNNNAGG	1 cut(s)	603
BstF5I	GGATG	7 cut(s)	1242, 1480, 1550, 1756, 1828, 1914, 1954
BstFNI	CGCG	4 cut(s)	25, 44, 49, 174
BstH2I	RGCGCY	1 cut(s)	1256
BstHHI	GCGC	4 cut(s)	27, 49, 1255, 1932
BstKTI	GATC	9 cut(s)	78, 261, 460, 509, 1051, 1305, 1892, 2053, 2140
BstMAI	GTCTC	5 cut(s)	158, 651, 881, 1397, 1639
BstMBI	GATC	9 cut(s)	75, 258, 457, 506, 1048, 1302, 1889, 2050, 2137
BstMWI	GCNNNNNNNGC	8 cut(s)	19, 133, 191, 335, 1237, 1508, 1517, 2123
BstNI	CCWGG	6 cut(s)	238, 525, 606, 765, 1247, 1378
BstNSI	RCATGY	3 cut(s)	1031, 1297, 2126
BstPAI	GACNNNNGTC	1 cut(s)	873
BstSCI	CCNGG	6 cut(s)	236, 523, 604, 763, 1245, 1376
BstSFI	CTRYAG	3 cut(s)	789, 871, 1152
BstUI	CGCG	4 cut(s)	25, 44, 49, 174
BstV1I	GCAGC	7 cut(s)	650, 803, 806, 1135, 1138, 1761, 1999
BstX2I	RGATCY	1 cut(s)	457
BstXI	CCANNNNNNTGG	1 cut(s)	1983
BstYI	RGATCY	1 cut(s)	457
Bsu36I	CCTNAGG	1 cut(s)	1701
BsuI	GTATCC	2 cut(s)	214, 1219
BsuRI	GGCC	7 cut(s)	163, 306, 598, 866, 1019, 1083, 2117
BtgI	CCRYGG	2 cut(s)	42, 1691
BtsCI	GGATG	7 cut(s)	1242, 1480, 1550, 1756, 1828, 1914, 1954
BtsI	GCAGTG	1 cut(s)	345
BtsIMutI	CAGTG	3 cut(s)	345, 702, 1452
Cac8I	GCNNGC	4 cut(s)	187, 761, 1345, 2124
CfoI	GCGC	4 cut(s)	27, 49, 1255, 1932
Cfr13I	GGNCC	6 cut(s)	81, 305, 596, 608, 707, 1082
Cfr42I	CCGCGG	1 cut(s)	45
CseI	GACGC	3 cut(s)	28, 38, 2076
Csp6I	GTAC	8 cut(s)	343, 367, 409, 528, 1132, 1381, 1862, 1994
CviQI	GTAC	8 cut(s)	343, 367, 409, 528, 1132, 1381, 1862, 1994
DdeI	CTNAG	7 cut(s)	149, 582, 648, 1062, 1319, 1464, 1701
DpnI	GATC	9 cut(s)	77, 260, 459, 508, 1050, 1304, 1891, 2052, 2139
DpnII	GATC	9 cut(s)	75, 258, 457, 506, 1048, 1302, 1889, 2050, 2137
DraI	TTTAAA	1 cut(s)	363
DraIII	CACNNNGTG	1 cut(s)	1079
EaeI	YGGCCR	2 cut(s)	864, 2115
Eam1104I	CTCTTC	1 cut(s)	396
EarI	CTCTTC	1 cut(s)	396
EciI	GGCGGA	1 cut(s)	80
Eco130I	CCWWGG	2 cut(s)	1020, 1123
Eco147I	AGGCCT	1 cut(s)	1019
Eco47I	GGWCC	3 cut(s)	81, 608, 707
Eco47III	AGCGCT	1 cut(s)	1254
Eco57I	CTGAAG	1 cut(s)	771
Eco81I	CCTNAGG	1 cut(s)	1701
EcoNI	CCTNNNNNAGG	1 cut(s)	603
EcoO109I	RGGNCCY	1 cut(s)	81
EcoRII	CCWGG	6 cut(s)	236, 523, 604, 763, 1245, 1376
EcoT14I	CCWWGG	2 cut(s)	1020, 1123
EcoT22I	ATGCAT	2 cut(s)	1552, 1626
ErhI	CCWWGG	2 cut(s)	1020, 1123
Esp3I	CGTCTC	1 cut(s)	1397
FaqI	GGGAC	1 cut(s)	94
FauI	CCCGC	2 cut(s)	1464, 2009
FauNDI	CATATG	2 cut(s)	1546, 1681
FbaI	TGATCA	2 cut(s)	1302, 2050
FblI	GTMKAC	2 cut(s)	17, 682
Fnu4HI	GCNGC	9 cut(s)	23, 45, 639, 792, 795, 1149, 1152, 1775, 1988
FokI	GGATG	7 cut(s)	1229, 1487, 1537, 1743, 1835, 1921, 1941
Fsp4HI	GCNGC	9 cut(s)	23, 45, 639, 792, 795, 1149, 1152, 1775, 1988
FspBI	CTAG	4 cut(s)	419, 1499, 1604, 1991
GlaI	GCGC	4 cut(s)	26, 48, 1254, 1931
GluI	GCNGC	9 cut(s)	23, 45, 639, 792, 795, 1149, 1152, 1775, 1988
GsaI	CCCAGC	1 cut(s)	31
GsuI	CTGGAG	1 cut(s)	1217
HaeII	RGCGCY	1 cut(s)	1256
HaeIII	GGCC	7 cut(s)	163, 306, 598, 866, 1019, 1083, 2117
HgaI	GACGC	3 cut(s)	28, 38, 2076
HhaI	GCGC	4 cut(s)	27, 49, 1255, 1932
Hin1I	GRCGYC	2 cut(s)	20, 2087
Hin6I	GCGC	4 cut(s)	25, 47, 1253, 1930
HinP1I	GCGC	4 cut(s)	25, 47, 1253, 1930
HincII	GTYRAC	3 cut(s)	18, 579, 1614
HindII	GTYRAC	3 cut(s)	18, 579, 1614
HindIII	AAGCTT	2 cut(s)	183, 251
HinfI	GANTC	8 cut(s)	98, 212, 1328, 1610, 1696, 1753, 1951, 2010
HphI	GGTGA	3 cut(s)	854, 1912, 1913
Hpy166II	GTNNAC	9 cut(s)	18, 278, 343, 579, 622, 683, 1531, 1614, 1920
Hpy188I	TCNGA	9 cut(s)	75, 118, 258, 751, 1000, 1141, 1590, 2062, 2092
Hpy8I	GTNNAC	9 cut(s)	18, 278, 343, 579, 622, 683, 1531, 1614, 1920
Hpy99I	CGWCG	4 cut(s)	19, 22, 98, 2028
HpyCH4III	ACNGT	4 cut(s)	1372, 1447, 1535, 1795
HpyCH4IV	ACGT	3 cut(s)	1390, 1762, 1937
HpyF10VI	GCNNNNNNNGC	8 cut(s)	19, 133, 191, 335, 1237, 1508, 1517, 2123
HpyF3I	CTNAG	7 cut(s)	149, 582, 648, 1062, 1319, 1464, 1701
HpySE526I	ACGT	3 cut(s)	1390, 1762, 1937
Hsp92I	GRCGYC	2 cut(s)	20, 2087
HspAI	GCGC	4 cut(s)	25, 47, 1253, 1930
Ksp22I	TGATCA	2 cut(s)	1302, 2050
KspI	CCGCGG	1 cut(s)	45
Kzo9I	GATC	9 cut(s)	75, 258, 457, 506, 1048, 1302, 1889, 2050, 2137
LmnI	GCTCC	3 cut(s)	5, 44, 1270
Lsp1109I	GCAGC	7 cut(s)	650, 803, 806, 1135, 1138, 1761, 1999
LweI	GCATC	8 cut(s)	250, 625, 740, 1227, 1252, 1559, 1611, 1813
MaeI	CTAG	4 cut(s)	419, 1499, 1604, 1991
MaeII	ACGT	3 cut(s)	1390, 1762, 1937
MalI	GATC	9 cut(s)	77, 260, 459, 508, 1050, 1304, 1891, 2052, 2139
MbiI	CCGCTC	1 cut(s)	8
MboI	GATC	9 cut(s)	75, 258, 457, 506, 1048, 1302, 1889, 2050, 2137
MboII	GAAGA	3 cut(s)	413, 626, 1924
MfeI	CAATTG	1 cut(s)	2046
MflI	RGATCY	1 cut(s)	457
MlsI	TGGCCA	1 cut(s)	2117
MluNI	TGGCCA	1 cut(s)	2117
MlyI	GAGTC	3 cut(s)	107, 1619, 1960
MmeI	TCCRAC	1 cut(s)	2115
Mox20I	TGGCCA	1 cut(s)	2117
Mph1103I	ATGCAT	2 cut(s)	1552, 1626
MroXI	GAANNNNTTC	2 cut(s)	1737, 1916
MscI	TGGCCA	1 cut(s)	2117
MseI	TTAA	8 cut(s)	333, 362, 371, 555, 1338, 1421, 1664, 1881
MslI	CAYNNNNRTG	3 cut(s)	912, 1981, 2103
Msp20I	TGGCCA	1 cut(s)	2117
MspA1I	CMGCKG	3 cut(s)	44, 55, 2004
MspR9I	CCNGG	6 cut(s)	238, 525, 606, 765, 1247, 1378
MunI	CAATTG	1 cut(s)	2046
Mva1269I	GAATGC	1 cut(s)	1347
MvaI	CCWGG	6 cut(s)	238, 525, 606, 765, 1247, 1378
MvnI	CGCG	4 cut(s)	25, 44, 49, 174
MwoI	GCNNNNNNNGC	8 cut(s)	19, 133, 191, 335, 1237, 1508, 1517, 2123
NdeI	CATATG	2 cut(s)	1546, 1681
NdeII	GATC	9 cut(s)	75, 258, 457, 506, 1048, 1302, 1889, 2050, 2137
NlaIV	GGNNCC	3 cut(s)	12, 82, 1521
NsiI	ATGCAT	2 cut(s)	1552, 1626
NspI	RCATGY	3 cut(s)	1031, 1297, 2126
OliI	CACNNNNGTG	1 cut(s)	912
PaeI	GCATGC	1 cut(s)	2126
PceI	AGGCCT	1 cut(s)	1019
PciI	ACATGT	1 cut(s)	1293
PcsI	WCGNNNNNNNCGW	2 cut(s)	84, 93
PctI	GAATGC	1 cut(s)	1347
PdmI	GAANNNNTTC	2 cut(s)	1737, 1916
PfeI	GAWTC	5 cut(s)	212, 1328, 1696, 1753, 2010
PflMI	CCANNNNNTGG	1 cut(s)	1561
PfoI	TCCNGGA	1 cut(s)	1245
PkrI	GCNGC	9 cut(s)	24, 46, 640, 793, 796, 1150, 1153, 1776, 1989
PleI	GAGTC	3 cut(s)	106, 1618, 1959
PpsI	GAGTC	3 cut(s)	106, 1618, 1959
Ppu21I	YACGTR	1 cut(s)	1938
PpuMI	RGGWCCY	1 cut(s)	81
PscI	ACATGT	1 cut(s)	1293
PshAI	GACNNNNGTC	1 cut(s)	873
PshBI	ATTAAT	2 cut(s)	1421, 1881
Psp5II	RGGWCCY	1 cut(s)	81
Psp6I	CCWGG	6 cut(s)	236, 523, 604, 763, 1245, 1376
PspFI	CCCAGC	1 cut(s)	27
PspGI	CCWGG	6 cut(s)	236, 523, 604, 763, 1245, 1376
PspN4I	GGNNCC	3 cut(s)	12, 82, 1521
PspPI	GGNCC	6 cut(s)	81, 305, 596, 608, 707, 1082
PspPPI	RGGWCCY	1 cut(s)	81
PstI	CTGCAG	3 cut(s)	793, 875, 1156
PsuI	RGATCY	1 cut(s)	457
RsaI	GTAC	8 cut(s)	344, 368, 410, 529, 1133, 1382, 1863, 1995
RsaNI	GTAC	8 cut(s)	343, 367, 409, 528, 1132, 1381, 1862, 1994
RseI	CAYNNNNRTG	3 cut(s)	912, 1981, 2103
SacII	CCGCGG	1 cut(s)	45
SalI	GTCGAC	1 cut(s)	16
SaqAI	TTAA	8 cut(s)	333, 362, 371, 555, 1338, 1421, 1664, 1881
SatI	GCNGC	9 cut(s)	23, 45, 639, 792, 795, 1149, 1152, 1775, 1988
Sau3AI	GATC	9 cut(s)	75, 258, 457, 506, 1048, 1302, 1889, 2050, 2137
Sau96I	GGNCC	6 cut(s)	81, 305, 596, 608, 707, 1082
ScaI	AGTACT	3 cut(s)	368, 1863, 1995
SchI	GAGTC	3 cut(s)	107, 1619, 1960
ScrFI	CCNGG	6 cut(s)	238, 525, 606, 765, 1247, 1378
SfaNI	GCATC	8 cut(s)	250, 625, 740, 1227, 1252, 1559, 1611, 1813
SfcI	CTRYAG	3 cut(s)	789, 871, 1152
Sfr303I	CCGCGG	1 cut(s)	45
SgrBI	CCGCGG	1 cut(s)	45
SgrDI	CGTCGACG	1 cut(s)	16
SinI	GGWCC	3 cut(s)	81, 608, 707
SmiMI	CAYNNNNRTG	3 cut(s)	912, 1981, 2103
SmlI	CTYRAG	2 cut(s)	850, 1642
SmoI	CTYRAG	2 cut(s)	850, 1642
SphI	GCATGC	1 cut(s)	2126
SseBI	AGGCCT	1 cut(s)	1019
SsiI	CCGC	9 cut(s)	8, 23, 42, 44, 53, 65, 172, 1471, 2002
SspI	AATATT	1 cut(s)	1662
SspMI	CTAG	4 cut(s)	419, 1499, 1604, 1991
StuI	AGGCCT	1 cut(s)	1019
StyD4I	CCNGG	6 cut(s)	236, 523, 604, 763, 1245, 1376
StyI	CCWWGG	2 cut(s)	1020, 1123
TaaI	ACNGT	4 cut(s)	1372, 1447, 1535, 1795
TaiI	ACGT	3 cut(s)	1393, 1765, 1940
TaqI	TCGA	5 cut(s)	17, 468, 713, 1116, 2026
TatI	WGTACW	6 cut(s)	342, 366, 408, 1131, 1861, 1993
TauI	GCSGC	2 cut(s)	25, 47
TfiI	GAWTC	5 cut(s)	212, 1328, 1696, 1753, 2010
Tru1I	TTAA	8 cut(s)	333, 362, 371, 555, 1338, 1421, 1664, 1881
Tru9I	TTAA	8 cut(s)	333, 362, 371, 555, 1338, 1421, 1664, 1881
TscAI	CASTG	3 cut(s)	345, 709, 1452
TseI	GCWGC	7 cut(s)	638, 791, 794, 1148, 1151, 1774, 1987
TspDTI	ATGAA	8 cut(s)	438, 530, 550, 1320, 1407, 1925, 1956, 2094
TspGWI	ACGGA	3 cut(s)	1631, 1708, 2130
TspRI	CASTG	3 cut(s)	345, 709, 1452
Van91I	CCANNNNNTGG	1 cut(s)	1561
VpaK11BI	GGWCC	3 cut(s)	81, 608, 707
VspI	ATTAAT	2 cut(s)	1421, 1881
XagI	CCTNNNNNAGG	1 cut(s)	603
XapI	RAATTY	4 cut(s)	799, 967, 1043, 2035
XbaI	TCTAGA	1 cut(s)	418
XceI	RCATGY	3 cut(s)	1031, 1297, 2126
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1409
XmiI	GTMKAC	2 cut(s)	17, 682
XmnI	GAANNNNTTC	2 cut(s)	1737, 1916
XspI	CTAG	4 cut(s)	419, 1499, 1604, 1991
ZrmI	AGTACT	3 cut(s)	368, 1863, 1995
Zsp2I	ATGCAT	2 cut(s)	1552, 1626

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.