Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0013958.1

Orthogroup ID

OG0008749

Physical Location & Seq

Genomic Coordinates Reverse (-)

12851 .. 19840

Gene Structure 6990 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0013958.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2412 bp

atggtcagaggaaaaagattaactggagaattaacgcaatgtcgttttggatccacaaccgaaaaaattctgcaaagtcgcgtgtctcaatctccaccgtcaccttccgatccagacctctccggtaatgccgttggcgccaacaaccgtcgagatcgctcaccgagtcctctaaatcttcgtcgtcgttgtcgtcgtggtcttctgcttgccgctgcattttttctccgaatgggagcggtgccgtcgacgccgcgctgggggagtagctccgcggcgcgtccgctggaaacggcggagtatctgatcgggaccttcgtcggcgacgagtcgtttcctttgtcctctgattactggcagaaattgcttgacctccctctcagtctccaatggcctcctgaccgcgttcaacaagcttgcgaggctcttgcacaaaacaactacaaaaccaggcatctcgcaaagcttctgatccatctggcatggtgtttacaagaagctatttcaacttctggtggcccttctcttgtttatgggaaggctgttaatgcagtgtacatctcatctgtctttttaaagtacctaattgaaaatccaaaaagcgacaagattgaagagttgtacttatctctagatgaaagtgagccaatgccaactgatattacaagagatctaaacatcgaggattttgtaatgtgtagtgtgcttacctttattggatcaatagatgtaagtcctggtacatacctccttcatttggaactgcttaacttcgtgctgattgcaatgtcaactcagcttctttctgggccatccccaggaccagaagatgtgaacccatttcttgatgcagcaatgtctcaggaaagctcgttggttatctcggttgttcgtagactgctactcaactacatcactggaccttcgatacccctgaatagtgcatcttattctatattttctgaaggaagccagcctggtgttatacaaagagttagttctgcagcagcaaatttgatgttattaccattcaactttctcgtcagttcaagtggtgaaggctcaagaagtcttttggccgactgcagtctccatgtgctacttattctcactcattatcataaatgtgttgtgggcaacgagccaataacagattcaagtactgacaccactacttcaaattcacttttgaaagggagtagatatttttctgacaacccttactgcaaggccttggaacatgcaacagatgttgaatttgatcgtgtagatactgagggtaacgcacatagtggtccagttttgaggttaccttttgcttccctgttcgatacccttggaatgtacttgtctgatgaggctgctgcacttttgctttactctttattgcaaggaaatgctgactttctggagtatgtcttggtgcgaactgatttggatacgctgttgatgcccatcctggaagcgttatatgatgctccaaaaaggacatctaatcaaatctacatgttgctgatcatacttctcatacttagtcaggattcatcttttaatgcaagcattcacaaattgatacttcctactgttccctggtacaaagaacgtctcctccaccagacatctcttggttcattaatggtcattacgctgataaggacagtgcagtataacctatctaagttgcgggatgtttatctccatacaacttgtctagcaactttggcaaacatggcacctcatgtccaccgtttgagtgcatatgcatctcagagattggtcagcctatttgatatgctgtctcggaagtataacaaactagcagaggtgcgtaataatcagatgacattagccaaaggcaactcaatagaagacgatacttcaacggagatgcatatatataccgacttcttgagacttgtccttgaaatattaaatgcaattttgacatatgctctgccacggaatcctgaggttatatatgcgataatgcacaggcaggaagtatttcagcctttcaggaatcatccacgtttcaatgagctgcttgaaaacatttatacagtattagattttttcaatagtcgtgtggatgcacaaagaacagatggagaatggtcagtagaaaaagtacttcaagtcattatcattaattgtagatcatggcgtggtgaagggatgaagatgttcacccagttgcgcttcacatatgaacaagagagtcatccagaggagttctttattccatacttgtggcagctagtactgtcccgctgtggaatcagtttcaatcctcgagccataaatttgtttccaattgatcaaccttccgagaaacaaagtgattatgaagtggcgtctgacaatcatgtaaatggagaggtggctaagcgtgcagtctttcttgatccatag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Dymeclin

Protein Analysis

803

Amino Acids

90.18

Weight (kDa)

5.7

Isoelectric Point (pI)

52.28

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008749)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04200 AT1G04200 AT1G04200
fragaria_vesca	FvH4_4g01230 FvH4_4g01230 FvH4_4g01230
malus_domestica	MD13G1199900.v1.1 MD16G1199900.v1.1
prunus_persica	Prupe.1G021300_v2.0.a1
pyrus_communis	pycom13g17340 pycom16g16850
rosa_chinensis	RchiOBHm_Chr4g0387781
rosa_laevigata	RLG00000010096
rosa_multiflora	Rmu_sc0008916.1_g000003 Rmu_sc0013958.1_g000003
rosa_roxburghii	Rroxscaffold_5G00334400
rosa_rugosa	Rorug03G0313100 Rorug03G0313200 Rorug03G0313300
rosa_samantha	Rh4AG018300 Rh4CG019500 Rh4DG014100
rosa_wichuraiana	Rw4G001200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	137, 241, 1732
AccBSI	CCGCTC	1 cut(s)	239
AccI	GTMKAC	2 cut(s)	248, 895
AccII	CGCG	5 cut(s)	81, 256, 275, 280, 405
AclWI	GGATC	6 cut(s)	45, 58, 104, 466, 727, 2399
AcoI	YGGCCR	1 cut(s)	1077
AcsI	RAATTY	5 cut(s)	66, 1012, 1180, 1256, 2302
AcuI	CTGAAG	1 cut(s)	984
AcyI	GRCGYC	3 cut(s)	138, 251, 2354
AdeI	CACNNNGTG	1 cut(s)	1292
AfaI	GTAC	9 cut(s)	557, 581, 623, 742, 1162, 1346, 1595, 2130, 2262
AfiI	CCNNNNNNNGG	3 cut(s)	260, 757, 818
AflIII	ACRYGT	1 cut(s)	1506
AjnI	CCWGG	6 cut(s)	449, 736, 817, 976, 1458, 1589
AjuI	GAANNNNNNNTTGG	2 cut(s)	1138, 1170
AloI	GAACNNNNNNTCC	2 cut(s)	1593, 1625
AluBI	AGCT	8 cut(s)	270, 416, 466, 500, 799, 870, 2041, 2257
AluI	AGCT	8 cut(s)	270, 416, 466, 500, 799, 870, 2041, 2257
Alw26I	GTCTC	7 cut(s)	90, 389, 864, 1094, 1610, 1803, 1906
AlwI	GGATC	6 cut(s)	45, 58, 104, 466, 727, 2399
Ama87I	CYCGRG	1 cut(s)	2292
AoxI	GGCC	5 cut(s)	392, 517, 809, 1077, 1230
ApeKI	GCWGC	8 cut(s)	215, 851, 1004, 1007, 1361, 1364, 2041, 2254
ApoI	RAATTY	5 cut(s)	66, 1012, 1180, 1256, 2302
AseI	ATTAAT	2 cut(s)	1634, 2148
Asp700I	GAANNNNTTC	3 cut(s)	66, 2004, 2183
AspLEI	GCGC	4 cut(s)	140, 258, 280, 2199
AspS9I	GGNCC	6 cut(s)	312, 518, 809, 821, 920, 1295
AsuHPI	GGTGA	5 cut(s)	93, 153, 1067, 2179, 2180
AvaI	CYCGRG	1 cut(s)	2292
AvaII	GGWCC	4 cut(s)	312, 821, 920, 1295
AxyI	CCTNAGG	1 cut(s)	1968
BamHI	GGATCC	1 cut(s)	50
BanI	GGYRCC	3 cut(s)	137, 241, 1732
BbsI	GAAGAC	2 cut(s)	194, 1875
BbvI	GCAGC	8 cut(s)	202, 863, 1016, 1019, 1348, 1351, 2028, 2266
BccI	CCATC	4 cut(s)	483, 820, 1463, 2099
BceAI	ACGGC	3 cut(s)	116, 229, 309
BcgI	CGANNNNNNTGC	2 cut(s)	410, 444
BciT130I	CCWGG	6 cut(s)	451, 738, 819, 978, 1460, 1591
BciVI	GTATCC	1 cut(s)	1432
BclI	TGATCA	2 cut(s)	1515, 2317
BcoDI	GTCTC	7 cut(s)	90, 389, 864, 1094, 1610, 1803, 1906
BfaI	CTAG	4 cut(s)	632, 1712, 1817, 2258
BfmI	CTRYAG	2 cut(s)	1002, 1084
BfoI	RGCGCY	1 cut(s)	141
BfuI	GTATCC	1 cut(s)	1432
BglII	AGATCT	1 cut(s)	670
BlpI	GCTNAGC	1 cut(s)	2385
BmcAI	AGTACT	3 cut(s)	1162, 2130, 2262
Bme1390I	CCNGG	6 cut(s)	451, 738, 819, 978, 1460, 1591
Bme18I	GGWCC	4 cut(s)	312, 821, 920, 1295
BmeT110I	CYCGRG	1 cut(s)	2292
BmgT120I	GGNCC	6 cut(s)	312, 518, 809, 821, 920, 1295
BmiI	GGNNCC	5 cut(s)	52, 139, 243, 313, 1734
BmrFI	CCNGG	6 cut(s)	451, 738, 819, 978, 1460, 1591
BmrI	ACTGGG	1 cut(s)	2185
BmsI	GCATC	8 cut(s)	463, 838, 953, 1440, 1465, 1772, 1878, 2080
BmuI	ACTGGG	1 cut(s)	2185
BoxI	GACNNNNGTC	2 cut(s)	317, 1086
BpiI	GAAGAC	2 cut(s)	194, 1875
BpmI	CTGGAG	2 cut(s)	45, 1430
Bpu1102I	GCTNAGC	1 cut(s)	2385
BpuEI	CTTGAG	2 cut(s)	1048, 1930
BsaBI	GATNNNNATC	2 cut(s)	1454, 1692
BsaHI	GRCGYC	3 cut(s)	138, 251, 2354
BsaJI	CCNNGG	6 cut(s)	273, 817, 1233, 1336, 1589, 1958
BsaWI	WCCGGW	1 cut(s)	122
BsaXI	ACNNNNNCTCC	2 cut(s)	1593, 1623
Bsc4I	CCNNNNNNNGG	3 cut(s)	260, 757, 818
Bse1I	ACTGG	5 cut(s)	28, 359, 922, 1298, 2191
Bse21I	CCTNAGG	1 cut(s)	1968
Bse3DI	GCAATG	3 cut(s)	44, 792, 861
Bse8I	GATNNNNATC	2 cut(s)	1454, 1692
BseBI	CCWGG	6 cut(s)	451, 738, 819, 978, 1460, 1591
BseDI	CCNNGG	6 cut(s)	273, 817, 1233, 1336, 1589, 1958
BseGI	GGATG	7 cut(s)	812, 1455, 1693, 2023, 2095, 2181, 2221
BseJI	GATNNNNATC	2 cut(s)	1454, 1692
BseLI	CCNNNNNNNGG	3 cut(s)	260, 757, 818
BseMI	GCAATG	3 cut(s)	44, 792, 861
BseMII	CTCAG	6 cut(s)	394, 809, 875, 1266, 1781, 1959
BseNI	ACTGG	5 cut(s)	28, 359, 922, 1298, 2191
BseRI	GAGGAG	2 cut(s)	1598, 2243
BseXI	GCAGC	8 cut(s)	202, 863, 1016, 1019, 1348, 1351, 2028, 2266
BseYI	CCCAGC	1 cut(s)	258
BsgI	GTGCAG	3 cut(s)	1350, 1682, 2412
Bsh1236I	CGCG	5 cut(s)	81, 256, 275, 280, 405
BshFI	GGCC	5 cut(s)	394, 519, 811, 1079, 1232
BshNI	GGYRCC	3 cut(s)	137, 241, 1732
BsiHKCI	CYCGRG	1 cut(s)	2292
BsiSI	CCGG	1 cut(s)	123
BslFI	GGGAC	2 cut(s)	325, 2251
BslI	CCNNNNNNNGG	3 cut(s)	260, 757, 818
BsmAI	GTCTC	7 cut(s)	90, 389, 864, 1094, 1610, 1803, 1906
BsmBI	CGTCTC	1 cut(s)	1610
BsmFI	GGGAC	2 cut(s)	325, 2251
BsmI	GAATGC	1 cut(s)	1560
BsnI	GGCC	5 cut(s)	394, 519, 811, 1079, 1232
BsoBI	CYCGRG	1 cut(s)	2292
Bsp1407I	TGTACA	1 cut(s)	555
Bsp1720I	GCTNAGC	1 cut(s)	2385
BspANI	GGCC	5 cut(s)	394, 519, 811, 1079, 1232
BspCNI	CTCAG	6 cut(s)	393, 808, 874, 1267, 1780, 1960
BspFNI	CGCG	5 cut(s)	81, 256, 275, 280, 405
BspLI	GGNNCC	5 cut(s)	52, 139, 243, 313, 1734
BspMAI	CTGCAG	2 cut(s)	1006, 1088
BspPI	GGATC	6 cut(s)	45, 58, 104, 466, 727, 2399
BspT107I	GGYRCC	3 cut(s)	137, 241, 1732
BsrBI	CCGCTC	1 cut(s)	239
BsrDI	GCAATG	3 cut(s)	44, 792, 861
BsrGI	TGTACA	1 cut(s)	555
BsrI	ACTGG	5 cut(s)	28, 359, 922, 1298, 2191
BssECI	CCNNGG	6 cut(s)	273, 817, 1233, 1336, 1589, 1958
BssNI	GRCGYC	3 cut(s)	138, 251, 2354
BssT1I	CCWWGG	2 cut(s)	1233, 1336
Bst2UI	CCWGG	6 cut(s)	451, 738, 819, 978, 1460, 1591
Bst4CI	ACNGT	7 cut(s)	99, 149, 1585, 1660, 1748, 2062, 2265
Bst6I	CTCTTC	1 cut(s)	609
BstACI	GRCGYC	3 cut(s)	138, 251, 2354
BstAPI	GCANNNNNTGC	1 cut(s)	364
BstAUI	TGTACA	1 cut(s)	555
BstC8I	GCNNGC	5 cut(s)	210, 418, 974, 1558, 2391
BstDEI	CTNAG	9 cut(s)	380, 795, 861, 1275, 1532, 1677, 1767, 1968, 2385
BstDSI	CCRYGG	2 cut(s)	273, 1958
BstEII	GGTNACC	1 cut(s)	1308
BstF5I	GGATG	7 cut(s)	812, 1455, 1693, 2023, 2095, 2181, 2221
BstFNI	CGCG	5 cut(s)	81, 256, 275, 280, 405
BstH2I	RGCGCY	1 cut(s)	141
BstHHI	GCGC	4 cut(s)	140, 258, 280, 2199
BstMAI	GTCTC	7 cut(s)	90, 389, 864, 1094, 1610, 1803, 1906
BstMWI	GCNNNNNNNGC	9 cut(s)	137, 250, 364, 422, 548, 1450, 1721, 1730, 2390
BstNI	CCWGG	6 cut(s)	451, 738, 819, 978, 1460, 1591
BstNSI	RCATGY	2 cut(s)	1244, 1510
BstPAI	GACNNNNGTC	2 cut(s)	317, 1086
BstPI	GGTNACC	1 cut(s)	1308
BstSCI	CCNGG	6 cut(s)	449, 736, 817, 976, 1458, 1589
BstSFI	CTRYAG	2 cut(s)	1002, 1084
BstUI	CGCG	5 cut(s)	81, 256, 275, 280, 405
BstV1I	GCAGC	8 cut(s)	202, 863, 1016, 1019, 1348, 1351, 2028, 2266
BstV2I	GAAGAC	2 cut(s)	194, 1875
BstX2I	RGATCY	2 cut(s)	50, 670
BstXI	CCANNNNNNTGG	1 cut(s)	2250
BstYI	RGATCY	2 cut(s)	50, 670
Bsu36I	CCTNAGG	1 cut(s)	1968
BsuI	GTATCC	1 cut(s)	1432
BsuRI	GGCC	5 cut(s)	394, 519, 811, 1079, 1232
BtgI	CCRYGG	2 cut(s)	273, 1958
BtsCI	GGATG	7 cut(s)	812, 1455, 1693, 2023, 2095, 2181, 2221
BtsI	GCAGTG	1 cut(s)	558
BtsIMutI	CAGTG	3 cut(s)	558, 915, 1665
Cac8I	GCNNGC	5 cut(s)	210, 418, 974, 1558, 2391
CfoI	GCGC	4 cut(s)	140, 258, 280, 2199
Cfr13I	GGNCC	6 cut(s)	312, 518, 809, 821, 920, 1295
Cfr42I	CCGCGG	1 cut(s)	276
CseI	GACGC	3 cut(s)	259, 269, 2343
Csp6I	GTAC	9 cut(s)	556, 580, 622, 741, 1161, 1345, 1594, 2129, 2261
CviAII	CATG	8 cut(s)	483, 1094, 1241, 1507, 1729, 1739, 2160, 2366
CviQI	GTAC	9 cut(s)	556, 580, 622, 741, 1161, 1345, 1594, 2129, 2261
DdeI	CTNAG	9 cut(s)	380, 795, 861, 1275, 1532, 1677, 1767, 1968, 2385
DinI	GGCGCC	1 cut(s)	139
DraI	TTTAAA	1 cut(s)	576
DraIII	CACNNNGTG	1 cut(s)	1292
EaeI	YGGCCR	1 cut(s)	1077
Eam1104I	CTCTTC	1 cut(s)	609
EarI	CTCTTC	1 cut(s)	609
EciI	GGCGGA	1 cut(s)	311
Eco130I	CCWWGG	2 cut(s)	1233, 1336
Eco147I	AGGCCT	1 cut(s)	1232
Eco47I	GGWCC	4 cut(s)	312, 821, 920, 1295
Eco57I	CTGAAG	1 cut(s)	984
Eco81I	CCTNAGG	1 cut(s)	1968
Eco88I	CYCGRG	1 cut(s)	2292
Eco91I	GGTNACC	1 cut(s)	1308
EcoO109I	RGGNCCY	1 cut(s)	312
EcoO65I	GGTNACC	1 cut(s)	1308
EcoRII	CCWGG	6 cut(s)	449, 736, 817, 976, 1458, 1589
EcoT14I	CCWWGG	2 cut(s)	1233, 1336
EcoT22I	ATGCAT	2 cut(s)	1765, 1893
EgeI	GGCGCC	1 cut(s)	139
EheI	GGCGCC	1 cut(s)	139
ErhI	CCWWGG	2 cut(s)	1233, 1336
Esp3I	CGTCTC	1 cut(s)	1610
FaeI	CATG	8 cut(s)	486, 1097, 1244, 1510, 1732, 1742, 2163, 2369
FaqI	GGGAC	2 cut(s)	325, 2251
FatI	CATG	8 cut(s)	482, 1093, 1240, 1506, 1728, 1738, 2159, 2365
FauI	CCCGC	2 cut(s)	1677, 2276
FauNDI	CATATG	3 cut(s)	1759, 1948, 2206
FbaI	TGATCA	2 cut(s)	1515, 2317
FblI	GTMKAC	2 cut(s)	248, 895
FokI	GGATG	7 cut(s)	799, 1442, 1700, 2010, 2102, 2188, 2208
FspBI	CTAG	4 cut(s)	632, 1712, 1817, 2258
GlaI	GCGC	4 cut(s)	139, 257, 279, 2198
GsaI	CCCAGC	1 cut(s)	262
GsuI	CTGGAG	2 cut(s)	45, 1430
HaeII	RGCGCY	1 cut(s)	141
HaeIII	GGCC	5 cut(s)	394, 519, 811, 1079, 1232
HapII	CCGG	1 cut(s)	123
HgaI	GACGC	3 cut(s)	259, 269, 2343
HhaI	GCGC	4 cut(s)	140, 258, 280, 2199
Hin1I	GRCGYC	3 cut(s)	138, 251, 2354
Hin1II	CATG	8 cut(s)	486, 1097, 1244, 1510, 1732, 1742, 2163, 2369
Hin6I	GCGC	4 cut(s)	138, 256, 278, 2197
HinP1I	GCGC	4 cut(s)	138, 256, 278, 2197
HincII	GTYRAC	2 cut(s)	249, 792
HindII	GTYRAC	2 cut(s)	249, 792
HindIII	AAGCTT	2 cut(s)	414, 464
HinfI	GANTC	8 cut(s)	166, 329, 1154, 1541, 1963, 2020, 2218, 2277
HpaII	CCGG	1 cut(s)	123
HphI	GGTGA	5 cut(s)	93, 153, 1067, 2179, 2180
Hpy166II	GTNNAC	8 cut(s)	249, 491, 556, 792, 835, 896, 1744, 2187
Hpy8I	GTNNAC	8 cut(s)	249, 491, 556, 792, 835, 896, 1744, 2187
Hpy99I	CGWCG	8 cut(s)	153, 186, 189, 198, 250, 253, 323, 329
HpyCH4III	ACNGT	7 cut(s)	99, 149, 1585, 1660, 1748, 2062, 2265
HpyCH4IV	ACGT	2 cut(s)	1603, 2029
HpyF10VI	GCNNNNNNNGC	9 cut(s)	137, 250, 364, 422, 548, 1450, 1721, 1730, 2390
HpyF3I	CTNAG	9 cut(s)	380, 795, 861, 1275, 1532, 1677, 1767, 1968, 2385
HpySE526I	ACGT	2 cut(s)	1603, 2029
Hsp92I	GRCGYC	3 cut(s)	138, 251, 2354
Hsp92II	CATG	8 cut(s)	486, 1097, 1244, 1510, 1732, 1742, 2163, 2369
HspAI	GCGC	4 cut(s)	138, 256, 278, 2197
KasI	GGCGCC	1 cut(s)	137
Ksp22I	TGATCA	2 cut(s)	1515, 2317
KspI	CCGCGG	1 cut(s)	276
LmnI	GCTCC	3 cut(s)	236, 275, 1483
Lsp1109I	GCAGC	8 cut(s)	202, 863, 1016, 1019, 1348, 1351, 2028, 2266
LweI	GCATC	8 cut(s)	463, 838, 953, 1440, 1465, 1772, 1878, 2080
MaeI	CTAG	4 cut(s)	632, 1712, 1817, 2258
MaeII	ACGT	2 cut(s)	1603, 2029
MaeIII	GTNAC	3 cut(s)	99, 1280, 1308
MbiI	CCGCTC	1 cut(s)	239
MboII	GAAGA	6 cut(s)	170, 194, 626, 839, 1880, 2191
MfeI	CAATTG	1 cut(s)	2313
MflI	RGATCY	2 cut(s)	50, 670
Mly113I	GGCGCC	1 cut(s)	138
MlyI	GAGTC	3 cut(s)	175, 338, 2227
Mph1103I	ATGCAT	2 cut(s)	1765, 1893
MroXI	GAANNNNTTC	3 cut(s)	66, 2004, 2183
MseI	TTAA	9 cut(s)	20, 32, 546, 575, 768, 1551, 1634, 1931, 2148
MslI	CAYNNNNRTG	3 cut(s)	1125, 2248, 2370
MspA1I	CMGCKG	4 cut(s)	215, 275, 286, 2271
MspI	CCGG	1 cut(s)	123
MspR9I	CCNGG	6 cut(s)	451, 738, 819, 978, 1460, 1591
MunI	CAATTG	1 cut(s)	2313
Mva1269I	GAATGC	1 cut(s)	1560
MvaI	CCWGG	6 cut(s)	451, 738, 819, 978, 1460, 1591
MvnI	CGCG	5 cut(s)	81, 256, 275, 280, 405
MwoI	GCNNNNNNNGC	9 cut(s)	137, 250, 364, 422, 548, 1450, 1721, 1730, 2390
NarI	GGCGCC	1 cut(s)	138
NdeI	CATATG	3 cut(s)	1759, 1948, 2206
NlaIII	CATG	8 cut(s)	486, 1097, 1244, 1510, 1732, 1742, 2163, 2369
NlaIV	GGNNCC	5 cut(s)	52, 139, 243, 313, 1734
NmuCI	GTSAC	1 cut(s)	99
NsiI	ATGCAT	2 cut(s)	1765, 1893
NspI	RCATGY	2 cut(s)	1244, 1510
PaeR7I	CTCGAG	1 cut(s)	2292
PceI	AGGCCT	1 cut(s)	1232
PciI	ACATGT	1 cut(s)	1506
PcsI	WCGNNNNNNNCGW	4 cut(s)	190, 193, 315, 324
PctI	GAATGC	1 cut(s)	1560
PdmI	GAANNNNTTC	3 cut(s)	66, 2004, 2183
PfeI	GAWTC	5 cut(s)	1154, 1541, 1963, 2020, 2277
PfoI	TCCNGGA	1 cut(s)	1458
PleI	GAGTC	3 cut(s)	174, 337, 2226
PluTI	GGCGCC	1 cut(s)	141
PpsI	GAGTC	3 cut(s)	174, 337, 2226
PpuMI	RGGWCCY	1 cut(s)	312
PscI	ACATGT	1 cut(s)	1506
PshAI	GACNNNNGTC	2 cut(s)	317, 1086
PshBI	ATTAAT	2 cut(s)	1634, 2148
Psp5II	RGGWCCY	1 cut(s)	312
Psp6I	CCWGG	6 cut(s)	449, 736, 817, 976, 1458, 1589
PspEI	GGTNACC	1 cut(s)	1308
PspFI	CCCAGC	1 cut(s)	258
PspGI	CCWGG	6 cut(s)	449, 736, 817, 976, 1458, 1589
PspN4I	GGNNCC	5 cut(s)	52, 139, 243, 313, 1734
PspPI	GGNCC	6 cut(s)	312, 518, 809, 821, 920, 1295
PspPPI	RGGWCCY	1 cut(s)	312
PspXI	VCTCGAGB	1 cut(s)	2292
PstI	CTGCAG	2 cut(s)	1006, 1088
PsuI	RGATCY	2 cut(s)	50, 670
RsaI	GTAC	9 cut(s)	557, 581, 623, 742, 1162, 1346, 1595, 2130, 2262
RsaNI	GTAC	9 cut(s)	556, 580, 622, 741, 1161, 1345, 1594, 2129, 2261
RseI	CAYNNNNRTG	3 cut(s)	1125, 2248, 2370
SacII	CCGCGG	1 cut(s)	276
SalI	GTCGAC	1 cut(s)	247
SaqAI	TTAA	9 cut(s)	20, 32, 546, 575, 768, 1551, 1634, 1931, 2148
Sau96I	GGNCC	6 cut(s)	312, 518, 809, 821, 920, 1295
ScaI	AGTACT	3 cut(s)	1162, 2130, 2262
SchI	GAGTC	3 cut(s)	175, 338, 2227
ScrFI	CCNGG	6 cut(s)	451, 738, 819, 978, 1460, 1591
SfaNI	GCATC	8 cut(s)	463, 838, 953, 1440, 1465, 1772, 1878, 2080
SfcI	CTRYAG	2 cut(s)	1002, 1084
SfoI	GGCGCC	1 cut(s)	139
Sfr274I	CTCGAG	1 cut(s)	2292
Sfr303I	CCGCGG	1 cut(s)	276
SgrBI	CCGCGG	1 cut(s)	276
SgrDI	CGTCGACG	1 cut(s)	247
SinI	GGWCC	4 cut(s)	312, 821, 920, 1295
SlaI	CTCGAG	1 cut(s)	2292
SmiMI	CAYNNNNRTG	3 cut(s)	1125, 2248, 2370
SmlI	CTYRAG	3 cut(s)	1063, 1909, 2292
SmoI	CTYRAG	3 cut(s)	1063, 1909, 2292
SseBI	AGGCCT	1 cut(s)	1232
SspDI	GGCGCC	1 cut(s)	137
SspI	AATATT	1 cut(s)	1929
SspMI	CTAG	4 cut(s)	632, 1712, 1817, 2258
StuI	AGGCCT	1 cut(s)	1232
StyD4I	CCNGG	6 cut(s)	449, 736, 817, 976, 1458, 1589
StyI	CCWWGG	2 cut(s)	1233, 1336
TaaI	ACNGT	7 cut(s)	99, 149, 1585, 1660, 1748, 2062, 2265
TaiI	ACGT	2 cut(s)	1606, 2032
TaqI	TCGA	6 cut(s)	151, 248, 681, 926, 1329, 2293
TatI	WGTACW	6 cut(s)	555, 621, 1160, 1344, 2128, 2260
TauI	GCSGC	3 cut(s)	215, 256, 278
TfiI	GAWTC	5 cut(s)	1154, 1541, 1963, 2020, 2277
Tru1I	TTAA	9 cut(s)	20, 32, 546, 575, 768, 1551, 1634, 1931, 2148
Tru9I	TTAA	9 cut(s)	20, 32, 546, 575, 768, 1551, 1634, 1931, 2148
TscAI	CASTG	3 cut(s)	558, 922, 1665
TseFI	GTSAC	1 cut(s)	99
TseI	GCWGC	8 cut(s)	215, 851, 1004, 1007, 1361, 1364, 2041, 2254
Tsp45I	GTSAC	1 cut(s)	99
TspDTI	ATGAA	7 cut(s)	651, 743, 1533, 1620, 2192, 2223, 2361
TspGWI	ACGGA	2 cut(s)	1898, 1975
TspRI	CASTG	3 cut(s)	558, 922, 1665
VpaK11BI	GGWCC	4 cut(s)	312, 821, 920, 1295
VspI	ATTAAT	2 cut(s)	1634, 2148
XapI	RAATTY	5 cut(s)	66, 1012, 1180, 1256, 2302
XbaI	TCTAGA	1 cut(s)	631
XceI	RCATGY	2 cut(s)	1244, 1510
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1622
XhoI	CTCGAG	1 cut(s)	2292
XmiI	GTMKAC	2 cut(s)	248, 895
XmnI	GAANNNNTTC	3 cut(s)	66, 2004, 2183
XspI	CTAG	4 cut(s)	632, 1712, 1817, 2258
ZrmI	AGTACT	3 cut(s)	1162, 2130, 2262
Zsp2I	ATGCAT	2 cut(s)	1765, 1893

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.