Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0008749

Physical Location & Seq

Genomic Coordinates Forward (+)

2249319 .. 2255948

Gene Structure 6630 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G001200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2184 bp

ATGGGAGCGGTGCCGTCGACGCCGCGCTGGGGGAGTAGCTCCGCGGCGCGTCCGCTGGAAACGGCGGAGTATCTGATCGGGACCTTCGTCGGCGACGAGTCGTTTCCTTTGTCCTCTGATTACTGGCAGAAATTGCTCGACCTCCCTCTCAGTCTCCAATGGCCTCCTGACCGCGTTCAACAAGCTTGCGAGGCTCTTGCACAAAACAACTACAAAACTAGGCATCTCGCAAAGCTTCTGATCCATCTGGCATGGTGTTTACAAGAAGCTATTTCAACTTCTGGTGGCCCTTCTCTTGTTTATGGGAAGGCTGTTAATGCAGTGTACATCTCATCTGTCTTTTTAAAGTACCTAATTGAAAATCCAAAAAGCGACAAGATTGAAGAGTTGTACTTATCTCTAGATGAAAGTGAGCCAATGCCAACTGATATTACAAGAGATCTAAACATCGAGGATTTTGTAATGTGTAGTGTGCTTACCTTTATTGGATCAATAGATGTAAGTCCTGGTACATACCTCCTTCATTTGGAACTGCTTAACTTCATGCTGATTGCAATGTCAACTCAGCTTCTTTCTGGGCCATCCCCGGGACCAGAAGATGTGAACCCATTTCTTGATGCAGCAATGTCTCAGGAAAGCTCGTTGGTTATCTCGGTTGTTCGTAGACTGCTACTCAACTACATCACTGGACCTTCGATACCCCTGAATAGTGCATCTTATTCCATATTTTCTGAAGGAAGCCAGCCTGGTGTTATACAAAGAGTTAGTTCTGCAGCAGCAAATTTGATGTTATTACCATTCAACTTTCTCGTCAGTTCAAGTGGTGAAGGCTCAAGAAGTCTTTTGGCCAACTGCAGTCTCCATGTGCTACTTATTCTCACTCATTATCATAAATGTGTTGTGGGCAACGAGCCAATAACAGATTCAAGTACTGACACCACTACTTCAAATTCACTTTTGAAAGGGAGTAGATATTTTTCTGACAACCCTTACTGCAAGGCCTTGGAACATGCAACAGATGTTGAATTTGATCGTGTAGATACTGAGGGTAACGCACATAGTGGTCCAGTTTTGAGGTTACCTTTTGCTTCCCTGTTCGATACCCTTGGAATGTACTTGTCTGATGAGGCTGCTGCACTTTTGCTTTACTCTTTATTGCAAGGAAATGCTGACTTTTGGAGTATGTCTTGGTGCGAACTGATTTGGATACGCTGGTATTTGATGCCCATCCTGGAAGCGTTATATGATGCTCCAAAAAGGACATCTAATCAAATCTACATGTTGCTGATCATACTTCTCATACTTAGTCAGGATTCATCTTTTAATGCAAGCATTCACAAATTGATACTTCCTACTGTTCCCTGGTACAAAGAACGCCTCCTCCACCAGACATCTCTTGGTTCATTAATGGTCATTACGCTGATAAGGACAGTGCAGTATAACCTATCTAAGTTGCGGGATGTTTATCTCCATACAACTTGTCTAGCAACTTTGGCAAACATGGCACCTCATGTCCACCGTTTGAGTGCATATGCATCCCAGAGATTGGTCAGCCTATTTGATATGCTGTCTCGGAAGTATAACAAACTAGCAGAGGTGCGTAATAATCAGATGACATTAGCCAAAGGCAACTCAATAGAAGGCGATACTTCAACGGAGATGCATATATATACTGACTTCTTGAGACTTGTCCTTGAAATATTAAATGCAATTTTGACATATGCTCTGCCACGGAATCCTGAGGTTATATATGCGATAATGCACAGGCAGGAAGTATTTCAGCCTTTCAGGAATCATCCACGTTTCAATGAGCTGCTTGAAAACATTTATACAGTATTAGATTTTTTCAATAGTCGTGTGGATGCACAAAGAACAGATGGAGAATGGTCAGTAGAAAAAGTACTTCAAGTCATTATCATTAATTGTAGATCATGGCGTGGTGAAGGGATGAAGATGTTCACCCAGTTGCGCTTCACATATGAACAAGAGAGTCATCCAGAGGAGTTCTTTATTCCATACTTGTGGCAGCTAGTACTGTCCCGCTGTGGAATCAGTTTCAATCCTCGAGCCATAAATTTGTTTCCAATTGATCAACCTTCCGAGAAACAAAGTGATTATGAAGTGGCGTCCGACAATCGTGTAAATGGAGAGGTGGCTAAGCGTGCAGTCTTTGTTGATCCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Dymeclin

Protein Analysis

727

Amino Acids

82.05

Weight (kDa)

5.35

Isoelectric Point (pI)

48.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Dymeclin	PF09742	1 - 677	6.9e-184	Dyggve-Melchior-Clausen syndrome protein
Hid1	PF12722	416 - 538	1e-06	High-temperature-induced dauer-formation protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008749)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04200 AT1G04200 AT1G04200
fragaria_vesca	FvH4_4g01230 FvH4_4g01230 FvH4_4g01230
malus_domestica	MD13G1199900.v1.1 MD16G1199900.v1.1
prunus_persica	Prupe.1G021300_v2.0.a1
pyrus_communis	pycom13g17340 pycom16g16850
rosa_chinensis	RchiOBHm_Chr4g0387781
rosa_laevigata	RLG00000010096
rosa_multiflora	Rmu_sc0008916.1_g000003 Rmu_sc0013958.1_g000003
rosa_roxburghii	Rroxscaffold_5G00334400
rosa_rugosa	Rorug03G0313100 Rorug03G0313200 Rorug03G0313300
rosa_samantha	Rh4AG018300 Rh4CG019500 Rh4DG014100
rosa_wichuraiana	Rw4G001200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	10, 1504
AccB7I	CCANNNNNTGG	1 cut(s)	1546
AccBSI	CCGCTC	1 cut(s)	8
AccI	GTMKAC	2 cut(s)	17, 664
AccII	CGCG	4 cut(s)	25, 44, 49, 174
AciI	CCGC	9 cut(s)	8, 23, 42, 44, 53, 65, 172, 1456, 2041
AclWI	GGATC	3 cut(s)	235, 496, 2171
AcoI	YGGCCR	1 cut(s)	846
AcsI	RAATTY	4 cut(s)	781, 949, 1025, 2074
AcuI	CTGAAG	1 cut(s)	753
AcyI	GRCGYC	2 cut(s)	20, 2126
AdeI	CACNNNGTG	1 cut(s)	1061
AfaI	GTAC	9 cut(s)	326, 350, 392, 511, 931, 1115, 1367, 1902, 2034
AfiI	CCNNNNNNNGG	4 cut(s)	29, 526, 587, 1546
AflIII	ACRYGT	1 cut(s)	1278
AjnI	CCWGG	4 cut(s)	505, 745, 1230, 1361
AjuI	GAANNNNNNNTTGG	2 cut(s)	907, 939
AloI	GAACNNNNNNTCC	2 cut(s)	1365, 1397
AluBI	AGCT	8 cut(s)	39, 185, 235, 269, 568, 639, 1813, 2029
AluI	AGCT	8 cut(s)	39, 185, 235, 269, 568, 639, 1813, 2029
Alw26I	GTCTC	5 cut(s)	158, 633, 863, 1575, 1678
AlwI	GGATC	3 cut(s)	235, 496, 2171
Ama87I	CYCGRG	2 cut(s)	586, 2064
AoxI	GGCC	5 cut(s)	161, 286, 578, 846, 999
ApeKI	GCWGC	7 cut(s)	620, 773, 776, 1130, 1133, 1813, 2026
ApoI	RAATTY	4 cut(s)	781, 949, 1025, 2074
AseI	ATTAAT	2 cut(s)	1406, 1920
Asp700I	GAANNNNTTC	2 cut(s)	1776, 1955
AspLEI	GCGC	3 cut(s)	27, 49, 1971
AspS9I	GGNCC	6 cut(s)	81, 287, 578, 590, 689, 1064
AsuC2I	CCSGG	2 cut(s)	587, 588
AsuHPI	GGTGA	3 cut(s)	836, 1951, 1952
AvaI	CYCGRG	2 cut(s)	586, 2064
AvaII	GGWCC	4 cut(s)	81, 590, 689, 1064
AxyI	CCTNAGG	1 cut(s)	1740
BaeI	ACNNNNGTAYC	2 cut(s)	1199, 1232
BalI	TGGCCA	1 cut(s)	848
BanI	GGYRCC	2 cut(s)	10, 1504
BbvI	GCAGC	7 cut(s)	632, 785, 788, 1117, 1120, 1800, 2038
BccI	CCATC	4 cut(s)	252, 589, 1235, 1871
BceAI	ACGGC	1 cut(s)	78
BcgI	CGANNNNNNTGC	2 cut(s)	179, 213
BciT130I	CCWGG	4 cut(s)	507, 747, 1232, 1363
BciVI	GTATCC	1 cut(s)	1200
BclI	TGATCA	2 cut(s)	1287, 2089
BcnI	CCSGG	2 cut(s)	587, 588
BcoDI	GTCTC	5 cut(s)	158, 633, 863, 1575, 1678
BfaI	CTAG	5 cut(s)	219, 401, 1484, 1589, 2030
BfmI	CTRYAG	2 cut(s)	771, 853
BfuI	GTATCC	1 cut(s)	1200
BglII	AGATCT	1 cut(s)	439
BisI	GCNGC	9 cut(s)	23, 45, 621, 774, 777, 1131, 1134, 1814, 2027
BlpI	GCTNAGC	1 cut(s)	2157
BlsI	GCNGC	9 cut(s)	24, 46, 622, 775, 778, 1132, 1135, 1815, 2028
BmcAI	AGTACT	3 cut(s)	931, 1902, 2034
Bme1390I	CCNGG	6 cut(s)	507, 587, 588, 747, 1232, 1363
Bme18I	GGWCC	4 cut(s)	81, 590, 689, 1064
BmeT110I	CYCGRG	2 cut(s)	586, 2064
BmgT120I	GGNCC	6 cut(s)	81, 287, 578, 590, 689, 1064
BmiI	GGNNCC	4 cut(s)	12, 82, 591, 1506
BmrFI	CCNGG	6 cut(s)	507, 587, 588, 747, 1232, 1363
BmrI	ACTGGG	1 cut(s)	1957
BmsI	GCATC	8 cut(s)	232, 607, 722, 1212, 1237, 1544, 1650, 1852
BmuI	ACTGGG	1 cut(s)	1957
BoxI	GACNNNNGTC	1 cut(s)	86
Bpu1102I	GCTNAGC	1 cut(s)	2157
BpuEI	CTTGAG	2 cut(s)	817, 1702
BpuMI	CCSGG	2 cut(s)	587, 588
BsaBI	GATNNNNATC	2 cut(s)	1226, 1464
BsaHI	GRCGYC	2 cut(s)	20, 2126
BsaJI	CCNNGG	7 cut(s)	42, 585, 586, 1002, 1105, 1361, 1730
BsaXI	ACNNNNNCTCC	2 cut(s)	1365, 1395
Bsc4I	CCNNNNNNNGG	4 cut(s)	29, 526, 587, 1546
Bse1I	ACTGG	4 cut(s)	128, 691, 1067, 1963
Bse21I	CCTNAGG	1 cut(s)	1740
Bse3DI	GCAATG	2 cut(s)	561, 630
Bse8I	GATNNNNATC	2 cut(s)	1226, 1464
BseBI	CCWGG	4 cut(s)	507, 747, 1232, 1363
BseDI	CCNNGG	7 cut(s)	42, 585, 586, 1002, 1105, 1361, 1730
BseGI	GGATG	8 cut(s)	581, 1227, 1465, 1535, 1795, 1867, 1953, 1993
BseJI	GATNNNNATC	2 cut(s)	1226, 1464
BseLI	CCNNNNNNNGG	4 cut(s)	29, 526, 587, 1546
BseMI	GCAATG	2 cut(s)	561, 630
BseMII	CTCAG	5 cut(s)	163, 578, 644, 1035, 1731
BseNI	ACTGG	4 cut(s)	128, 691, 1067, 1963
BseRI	GAGGAG	2 cut(s)	1370, 2015
BseXI	GCAGC	7 cut(s)	632, 785, 788, 1117, 1120, 1800, 2038
BseYI	CCCAGC	1 cut(s)	27
BsgI	GTGCAG	3 cut(s)	1119, 1454, 2184
Bsh1236I	CGCG	4 cut(s)	25, 44, 49, 174
BshFI	GGCC	5 cut(s)	163, 288, 580, 848, 1001
BshNI	GGYRCC	2 cut(s)	10, 1504
BsiHKCI	CYCGRG	2 cut(s)	586, 2064
BsiSI	CCGG	1 cut(s)	587
BslFI	GGGAC	3 cut(s)	94, 603, 2023
BslI	CCNNNNNNNGG	4 cut(s)	29, 526, 587, 1546
BsmAI	GTCTC	5 cut(s)	158, 633, 863, 1575, 1678
BsmFI	GGGAC	3 cut(s)	94, 603, 2023
BsmI	GAATGC	1 cut(s)	1332
BsnI	GGCC	5 cut(s)	163, 288, 580, 848, 1001
BsoBI	CYCGRG	2 cut(s)	586, 2064
Bsp1407I	TGTACA	1 cut(s)	324
Bsp143I	GATC	9 cut(s)	75, 240, 439, 488, 1030, 1287, 1928, 2089, 2176
Bsp1720I	GCTNAGC	1 cut(s)	2157
BspACI	CCGC	9 cut(s)	8, 23, 42, 44, 53, 65, 172, 1456, 2041
BspANI	GGCC	5 cut(s)	163, 288, 580, 848, 1001
BspCNI	CTCAG	5 cut(s)	162, 577, 643, 1036, 1732
BspFNI	CGCG	4 cut(s)	25, 44, 49, 174
BspLI	GGNNCC	4 cut(s)	12, 82, 591, 1506
BspMAI	CTGCAG	2 cut(s)	775, 857
BspPI	GGATC	3 cut(s)	235, 496, 2171
BspT107I	GGYRCC	2 cut(s)	10, 1504
BsrBI	CCGCTC	1 cut(s)	8
BsrDI	GCAATG	2 cut(s)	561, 630
BsrGI	TGTACA	1 cut(s)	324
BsrI	ACTGG	4 cut(s)	128, 691, 1067, 1963
BssECI	CCNNGG	7 cut(s)	42, 585, 586, 1002, 1105, 1361, 1730
BssMI	GATC	9 cut(s)	75, 240, 439, 488, 1030, 1287, 1928, 2089, 2176
BssNI	GRCGYC	2 cut(s)	20, 2126
BssT1I	CCWWGG	2 cut(s)	1002, 1105
Bst2UI	CCWGG	4 cut(s)	507, 747, 1232, 1363
Bst4CI	ACNGT	5 cut(s)	1357, 1432, 1520, 1834, 2037
Bst6I	CTCTTC	1 cut(s)	378
BstACI	GRCGYC	2 cut(s)	20, 2126
BstAPI	GCANNNNNTGC	1 cut(s)	133
BstAUI	TGTACA	1 cut(s)	324
BstC8I	GCNNGC	4 cut(s)	187, 743, 1330, 2163
BstDEI	CTNAG	8 cut(s)	149, 564, 630, 1044, 1304, 1449, 1740, 2157
BstDSI	CCRYGG	2 cut(s)	42, 1730
BstEII	GGTNACC	1 cut(s)	1077
BstF5I	GGATG	8 cut(s)	581, 1227, 1465, 1535, 1795, 1867, 1953, 1993
BstFNI	CGCG	4 cut(s)	25, 44, 49, 174
BstHHI	GCGC	3 cut(s)	27, 49, 1971
BstKTI	GATC	9 cut(s)	78, 243, 442, 491, 1033, 1290, 1931, 2092, 2179
BstMAI	GTCTC	5 cut(s)	158, 633, 863, 1575, 1678
BstMBI	GATC	9 cut(s)	75, 240, 439, 488, 1030, 1287, 1928, 2089, 2176
BstMWI	GCNNNNNNNGC	7 cut(s)	19, 133, 191, 317, 1493, 1502, 2162
BstNI	CCWGG	4 cut(s)	507, 747, 1232, 1363
BstNSI	RCATGY	2 cut(s)	1013, 1282
BstPAI	GACNNNNGTC	1 cut(s)	86
BstPI	GGTNACC	1 cut(s)	1077
BstSCI	CCNGG	6 cut(s)	505, 585, 586, 745, 1230, 1361
BstSFI	CTRYAG	2 cut(s)	771, 853
BstUI	CGCG	4 cut(s)	25, 44, 49, 174
BstV1I	GCAGC	7 cut(s)	632, 785, 788, 1117, 1120, 1800, 2038
BstX2I	RGATCY	1 cut(s)	439
BstXI	CCANNNNNNTGG	1 cut(s)	2022
BstYI	RGATCY	1 cut(s)	439
Bsu36I	CCTNAGG	1 cut(s)	1740
BsuI	GTATCC	1 cut(s)	1200
BsuRI	GGCC	5 cut(s)	163, 288, 580, 848, 1001
BtgI	CCRYGG	2 cut(s)	42, 1730
BtsCI	GGATG	8 cut(s)	581, 1227, 1465, 1535, 1795, 1867, 1953, 1993
BtsI	GCAGTG	1 cut(s)	327
BtsIMutI	CAGTG	3 cut(s)	327, 684, 1437
Cac8I	GCNNGC	4 cut(s)	187, 743, 1330, 2163
CfoI	GCGC	3 cut(s)	27, 49, 1971
Cfr13I	GGNCC	6 cut(s)	81, 287, 578, 590, 689, 1064
Cfr42I	CCGCGG	1 cut(s)	45
Cfr9I	CCCGGG	1 cut(s)	586
CseI	GACGC	3 cut(s)	28, 38, 2115
Csp6I	GTAC	9 cut(s)	325, 349, 391, 510, 930, 1114, 1366, 1901, 2033
CviAII	CATG	8 cut(s)	252, 544, 863, 1010, 1279, 1501, 1511, 1932
CviQI	GTAC	9 cut(s)	325, 349, 391, 510, 930, 1114, 1366, 1901, 2033
DdeI	CTNAG	8 cut(s)	149, 564, 630, 1044, 1304, 1449, 1740, 2157
DpnI	GATC	9 cut(s)	77, 242, 441, 490, 1032, 1289, 1930, 2091, 2178
DpnII	GATC	9 cut(s)	75, 240, 439, 488, 1030, 1287, 1928, 2089, 2176
DraI	TTTAAA	1 cut(s)	345
DraIII	CACNNNGTG	1 cut(s)	1061
EaeI	YGGCCR	1 cut(s)	846
Eam1104I	CTCTTC	1 cut(s)	378
EarI	CTCTTC	1 cut(s)	378
EciI	GGCGGA	1 cut(s)	80
Eco130I	CCWWGG	2 cut(s)	1002, 1105
Eco147I	AGGCCT	1 cut(s)	1001
Eco47I	GGWCC	4 cut(s)	81, 590, 689, 1064
Eco57I	CTGAAG	1 cut(s)	753
Eco81I	CCTNAGG	1 cut(s)	1740
Eco88I	CYCGRG	2 cut(s)	586, 2064
Eco91I	GGTNACC	1 cut(s)	1077
EcoO109I	RGGNCCY	1 cut(s)	81
EcoO65I	GGTNACC	1 cut(s)	1077
EcoRII	CCWGG	4 cut(s)	505, 745, 1230, 1361
EcoT14I	CCWWGG	2 cut(s)	1002, 1105
EcoT22I	ATGCAT	2 cut(s)	1537, 1665
ErhI	CCWWGG	2 cut(s)	1002, 1105
FaeI	CATG	8 cut(s)	255, 547, 866, 1013, 1282, 1504, 1514, 1935
FaqI	GGGAC	3 cut(s)	94, 603, 2023
FatI	CATG	8 cut(s)	251, 543, 862, 1009, 1278, 1500, 1510, 1931
FauI	CCCGC	2 cut(s)	1449, 2048
FauNDI	CATATG	3 cut(s)	1531, 1720, 1978
FbaI	TGATCA	2 cut(s)	1287, 2089
FblI	GTMKAC	2 cut(s)	17, 664
Fnu4HI	GCNGC	9 cut(s)	23, 45, 621, 774, 777, 1131, 1134, 1814, 2027
FokI	GGATG	8 cut(s)	568, 1214, 1472, 1522, 1782, 1874, 1960, 1980
Fsp4HI	GCNGC	9 cut(s)	23, 45, 621, 774, 777, 1131, 1134, 1814, 2027
FspBI	CTAG	5 cut(s)	219, 401, 1484, 1589, 2030
GlaI	GCGC	3 cut(s)	26, 48, 1970
GluI	GCNGC	9 cut(s)	23, 45, 621, 774, 777, 1131, 1134, 1814, 2027
GsaI	CCCAGC	1 cut(s)	31
HaeIII	GGCC	5 cut(s)	163, 288, 580, 848, 1001
HapII	CCGG	1 cut(s)	587
HgaI	GACGC	3 cut(s)	28, 38, 2115
HhaI	GCGC	3 cut(s)	27, 49, 1971
Hin1I	GRCGYC	2 cut(s)	20, 2126
Hin1II	CATG	8 cut(s)	255, 547, 866, 1013, 1282, 1504, 1514, 1935
Hin6I	GCGC	3 cut(s)	25, 47, 1969
HinP1I	GCGC	3 cut(s)	25, 47, 1969
HincII	GTYRAC	2 cut(s)	18, 561
HindII	GTYRAC	2 cut(s)	18, 561
HindIII	AAGCTT	2 cut(s)	183, 233
HinfI	GANTC	7 cut(s)	98, 923, 1313, 1735, 1792, 1990, 2049
HpaII	CCGG	1 cut(s)	587
HphI	GGTGA	3 cut(s)	836, 1951, 1952
Hpy166II	GTNNAC	8 cut(s)	18, 260, 325, 561, 604, 665, 1516, 1959
Hpy8I	GTNNAC	8 cut(s)	18, 260, 325, 561, 604, 665, 1516, 1959
Hpy99I	CGWCG	4 cut(s)	19, 22, 92, 98
HpyCH4III	ACNGT	5 cut(s)	1357, 1432, 1520, 1834, 2037
HpyCH4IV	ACGT	1 cut(s)	1801
HpyF10VI	GCNNNNNNNGC	7 cut(s)	19, 133, 191, 317, 1493, 1502, 2162
HpyF3I	CTNAG	8 cut(s)	149, 564, 630, 1044, 1304, 1449, 1740, 2157
HpySE526I	ACGT	1 cut(s)	1801
Hsp92I	GRCGYC	2 cut(s)	20, 2126
Hsp92II	CATG	8 cut(s)	255, 547, 866, 1013, 1282, 1504, 1514, 1935
HspAI	GCGC	3 cut(s)	25, 47, 1969
Ksp22I	TGATCA	2 cut(s)	1287, 2089
KspI	CCGCGG	1 cut(s)	45
Kzo9I	GATC	9 cut(s)	75, 240, 439, 488, 1030, 1287, 1928, 2089, 2176
LmnI	GCTCC	3 cut(s)	5, 44, 1255
Lsp1109I	GCAGC	7 cut(s)	632, 785, 788, 1117, 1120, 1800, 2038
LweI	GCATC	8 cut(s)	232, 607, 722, 1212, 1237, 1544, 1650, 1852
MaeI	CTAG	5 cut(s)	219, 401, 1484, 1589, 2030
MaeII	ACGT	1 cut(s)	1801
MaeIII	GTNAC	2 cut(s)	1049, 1077
MalI	GATC	9 cut(s)	77, 242, 441, 490, 1032, 1289, 1930, 2091, 2178
MbiI	CCGCTC	1 cut(s)	8
MboI	GATC	9 cut(s)	75, 240, 439, 488, 1030, 1287, 1928, 2089, 2176
MboII	GAAGA	3 cut(s)	395, 608, 1963
MfeI	CAATTG	1 cut(s)	2085
MflI	RGATCY	1 cut(s)	439
MlsI	TGGCCA	1 cut(s)	848
MluNI	TGGCCA	1 cut(s)	848
MlyI	GAGTC	2 cut(s)	107, 1999
MmeI	TCCRAC	1 cut(s)	2154
Mox20I	TGGCCA	1 cut(s)	848
Mph1103I	ATGCAT	2 cut(s)	1537, 1665
MroXI	GAANNNNTTC	2 cut(s)	1776, 1955
MscI	TGGCCA	1 cut(s)	848
MseI	TTAA	7 cut(s)	315, 344, 537, 1323, 1406, 1703, 1920
MslI	CAYNNNNRTG	2 cut(s)	894, 2020
Msp20I	TGGCCA	1 cut(s)	848
MspA1I	CMGCKG	3 cut(s)	44, 55, 2043
MspI	CCGG	1 cut(s)	587
MspR9I	CCNGG	6 cut(s)	507, 587, 588, 747, 1232, 1363
MunI	CAATTG	1 cut(s)	2085
Mva1269I	GAATGC	1 cut(s)	1332
MvaI	CCWGG	4 cut(s)	507, 747, 1232, 1363
MvnI	CGCG	4 cut(s)	25, 44, 49, 174
MwoI	GCNNNNNNNGC	7 cut(s)	19, 133, 191, 317, 1493, 1502, 2162
NciI	CCSGG	2 cut(s)	587, 588
NdeI	CATATG	3 cut(s)	1531, 1720, 1978
NdeII	GATC	9 cut(s)	75, 240, 439, 488, 1030, 1287, 1928, 2089, 2176
NlaIII	CATG	8 cut(s)	255, 547, 866, 1013, 1282, 1504, 1514, 1935
NlaIV	GGNNCC	4 cut(s)	12, 82, 591, 1506
NsiI	ATGCAT	2 cut(s)	1537, 1665
NspI	RCATGY	2 cut(s)	1013, 1282
PaeR7I	CTCGAG	1 cut(s)	2064
PceI	AGGCCT	1 cut(s)	1001
PciI	ACATGT	1 cut(s)	1278
PcsI	WCGNNNNNNNCGW	2 cut(s)	84, 93
PctI	GAATGC	1 cut(s)	1332
PdmI	GAANNNNTTC	2 cut(s)	1776, 1955
PfeI	GAWTC	5 cut(s)	923, 1313, 1735, 1792, 2049
PflMI	CCANNNNNTGG	1 cut(s)	1546
PfoI	TCCNGGA	1 cut(s)	1230
PkrI	GCNGC	9 cut(s)	24, 46, 622, 775, 778, 1132, 1135, 1815, 2028
PleI	GAGTC	2 cut(s)	106, 1998
PpsI	GAGTC	2 cut(s)	106, 1998
PpuMI	RGGWCCY	1 cut(s)	81
PscI	ACATGT	1 cut(s)	1278
PshAI	GACNNNNGTC	1 cut(s)	86
PshBI	ATTAAT	2 cut(s)	1406, 1920
Psp5II	RGGWCCY	1 cut(s)	81
Psp6I	CCWGG	4 cut(s)	505, 745, 1230, 1361
PspEI	GGTNACC	1 cut(s)	1077
PspFI	CCCAGC	1 cut(s)	27
PspGI	CCWGG	4 cut(s)	505, 745, 1230, 1361
PspN4I	GGNNCC	4 cut(s)	12, 82, 591, 1506
PspPI	GGNCC	6 cut(s)	81, 287, 578, 590, 689, 1064
PspPPI	RGGWCCY	1 cut(s)	81
PspXI	VCTCGAGB	1 cut(s)	2064
PstI	CTGCAG	2 cut(s)	775, 857
PsuI	RGATCY	1 cut(s)	439
RsaI	GTAC	9 cut(s)	326, 350, 392, 511, 931, 1115, 1367, 1902, 2034
RsaNI	GTAC	9 cut(s)	325, 349, 391, 510, 930, 1114, 1366, 1901, 2033
RseI	CAYNNNNRTG	2 cut(s)	894, 2020
SacII	CCGCGG	1 cut(s)	45
SalI	GTCGAC	1 cut(s)	16
SaqAI	TTAA	7 cut(s)	315, 344, 537, 1323, 1406, 1703, 1920
SatI	GCNGC	9 cut(s)	23, 45, 621, 774, 777, 1131, 1134, 1814, 2027
Sau3AI	GATC	9 cut(s)	75, 240, 439, 488, 1030, 1287, 1928, 2089, 2176
Sau96I	GGNCC	6 cut(s)	81, 287, 578, 590, 689, 1064
ScaI	AGTACT	3 cut(s)	931, 1902, 2034
SchI	GAGTC	2 cut(s)	107, 1999
ScrFI	CCNGG	6 cut(s)	507, 587, 588, 747, 1232, 1363
SfaNI	GCATC	8 cut(s)	232, 607, 722, 1212, 1237, 1544, 1650, 1852
SfcI	CTRYAG	2 cut(s)	771, 853
Sfr274I	CTCGAG	1 cut(s)	2064
Sfr303I	CCGCGG	1 cut(s)	45
SgrBI	CCGCGG	1 cut(s)	45
SgrDI	CGTCGACG	1 cut(s)	16
SinI	GGWCC	4 cut(s)	81, 590, 689, 1064
SlaI	CTCGAG	1 cut(s)	2064
SmaI	CCCGGG	1 cut(s)	588
SmiMI	CAYNNNNRTG	2 cut(s)	894, 2020
SmlI	CTYRAG	3 cut(s)	832, 1681, 2064
SmoI	CTYRAG	3 cut(s)	832, 1681, 2064
SseBI	AGGCCT	1 cut(s)	1001
SsiI	CCGC	9 cut(s)	8, 23, 42, 44, 53, 65, 172, 1456, 2041
SspI	AATATT	1 cut(s)	1701
SspMI	CTAG	5 cut(s)	219, 401, 1484, 1589, 2030
StuI	AGGCCT	1 cut(s)	1001
StyD4I	CCNGG	6 cut(s)	505, 585, 586, 745, 1230, 1361
StyI	CCWWGG	2 cut(s)	1002, 1105
TaaI	ACNGT	5 cut(s)	1357, 1432, 1520, 1834, 2037
TaiI	ACGT	1 cut(s)	1804
TaqI	TCGA	6 cut(s)	17, 138, 450, 695, 1098, 2065
TatI	WGTACW	6 cut(s)	324, 390, 929, 1113, 1900, 2032
TauI	GCSGC	2 cut(s)	25, 47
TfiI	GAWTC	5 cut(s)	923, 1313, 1735, 1792, 2049
Tru1I	TTAA	7 cut(s)	315, 344, 537, 1323, 1406, 1703, 1920
Tru9I	TTAA	7 cut(s)	315, 344, 537, 1323, 1406, 1703, 1920
TscAI	CASTG	3 cut(s)	327, 691, 1437
TseI	GCWGC	7 cut(s)	620, 773, 776, 1130, 1133, 1813, 2026
TspDTI	ATGAA	8 cut(s)	420, 512, 532, 1305, 1392, 1964, 1995, 2133
TspGWI	ACGGA	2 cut(s)	1670, 1747
TspMI	CCCGGG	1 cut(s)	586
TspRI	CASTG	3 cut(s)	327, 691, 1437
Van91I	CCANNNNNTGG	1 cut(s)	1546
VpaK11BI	GGWCC	4 cut(s)	81, 590, 689, 1064
VspI	ATTAAT	2 cut(s)	1406, 1920
XapI	RAATTY	4 cut(s)	781, 949, 1025, 2074
XbaI	TCTAGA	1 cut(s)	400
XceI	RCATGY	2 cut(s)	1013, 1282
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1394
XhoI	CTCGAG	1 cut(s)	2064
XmaI	CCCGGG	1 cut(s)	586
XmiI	GTMKAC	2 cut(s)	17, 664
XmnI	GAANNNNTTC	2 cut(s)	1776, 1955
XspI	CTAG	5 cut(s)	219, 401, 1484, 1589, 2030
ZrmI	AGTACT	3 cut(s)	931, 1902, 2034
Zsp2I	ATGCAT	2 cut(s)	1537, 1665

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.