Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0008749

Physical Location & Seq

Genomic Coordinates Forward (+)

3787193 .. 3794514

Gene Structure 7322 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG019500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2199 bp

ATGGGAGCGGTGCCGTCGACGCCGCGCTGGGGGAGTAGCTCCGCGGCGCGTCCGCTGGAAACGGCGGAGTATCTGATCGGGACCTTCGTCGGCGACGAGTCGTTTCCTTTGTCCTCTGATTACTGGCAGAAATTGCTCGACCTCCCTCTCAGTCTCCAATGGCCTCCTGACCGCGTTCAACAAGCTTGCGAGGCTCTTGCACAAAACAACTACAAAACCAGGCATCTCGCAAAGCTTCTGATCCATCTGGCATGGTGTTTACAAGAAGCTATTTCAACTTCTGGTGGCCCTTCTCTTGTTTATGGGAAGGCTGTTAATGCAGTGTACATCTCATCTGTCTTTTTAAAGTACCTAATTGAAAATCCAAAAAGTGACAAGATTGAAGAGTTGTACTTATCTCTAGATGAAAGTGAGCCAATGCCAACTGATATTACAAGAGATCTAAACATCGAGGATTTTGTAATGTGTAGTGTGCTTACCTTTATTGGATCAATAGATGTAAGTCCTGGTACATACCTCCTTCATTTGGAACTGCTTAACTTCATGCTGATTGCAATGTCAACTCAGCTTCTTTCTGGGCCATCCCCAGGACCAGAAGATGTGAACCCATTTCTTGATGCAGCAATGTCTCAGGAAAGCTCGTTGGTTATCTCGGTTGTTCGTAGACTGCTACTCAACTACATCACTGGACCTTCGATACCCCTGAATAGTGCATCTTATTCTATATTTTCTGAAGGAAGCCAGCCTGGTGTTATACAAAGAGTTAGTTCTGCAGCAGCAAATTTGATGTTATTACCATTCAACTTTCTCGTCAGTTCAAGTGGTGAAGGCTCAAGAAGTCTTTTGGCCGACTGCAGTCTCCATGTGCTACTTATTCTCACTCATTATCATAAATGTGTTGTGGGCAACGAGCCAATAACAGATTCAAGTACTGACACCACTACTTCAAATTCACTTTTGAAAGGGAGTAGATATTTTTCTGACAACCCTTACTGCAAGGCCTTGGAACATGCAACAGATGTTGAATTTGATCGTGTAGATACTGAGGGTAACGCACATAGTGGTCCAGTTTTGAGGTTACCTTTTGCTTCCCTGTTCGATACCCTTGGAATGTACTTGTCTGATGAGGCTGCTGCACTTTTGCTTTACTCTTTATTGCAAGGAAATGCTGACTTTCTGGAGTATGTCTTGGTGCGAACTGATTTGGATACGCTGTTGATGCCCATCCTGGAAGCGTTATATGATGCTCCAAAAAGGACATCTAATCAAATCTACATGTTGCTGATCATACTCCTCATACTTAGTCAGGATTCATCTTTTAATGCAAGCATTCACAAATTGATACTTCCTACTGTTCCCTGGTACAAAGAACGTCTCCTCCACCAGACATCTCTTGGTTCATTAATGGTCATTACGCTGATAAGGACAGTGCAGTATAACCTATCTAAGTTGCGGGATGTTTATCTCCATACAACTTGTCTAGCAACTTTGGCAAACATGGCACCTCATGTCCACCGTTTGAGTGCATATGCATCCCAGAGATTGGTCAGCCTATTTGATATGCTGTCTCGGAAGTATGCCCTTTTCTGTCTGCCTTGTTTTCTCTTGTCCATTAGCTTTACTCCATACTTTTCTATTTGTTTGGGAATTCATATTTTTATAGTGCCTTGCTTACACTTATTAGTGAATTGGTTAACATGTTGCTCTTGTCGTAATCTTTGGTTCAGGTATAACAAACTAGCAGAGGTGCGTAATAATCAGATGACATTAGCCAAAGGCAACTCAATAGAAGATGATACTTCAACGGAGATGCATATATATACCGACTTCTTGAGACTTGTCCTTGAAATATTAAATGCAATTTTGACATATGCTCTGCCACGGAATCCTGAGGTTATATATGCGATAATGCACAGGCAGGAAGTATTTCAGCCTTTCAGGAATCATCCACGTTTCAATGAGCTGCTTGAAAACATTTATACAGTATTAGATTTTTTCAATAGTCGTGTGGATGCACAAAGAACAGATGGGGAATGGTCAGTAGAAAAAGTACTTCAAGTCATTATCATTAATTGTAGATCATGGCGTGGTGAAGGGATGAAGATGTTCACCCAGTTGCGCTTCACATATGAACAAGAGAGTCATCCAGAGGAGTTCTTTATTCCATACTTGTGGCAGCTAGTACTGTCCCGCTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Dymeclin

Protein Analysis

732

Amino Acids

82.79

Weight (kDa)

5.42

Isoelectric Point (pI)

48.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Dymeclin	PF09742	1 - 727	1.4e-189	Dyggve-Melchior-Clausen syndrome protein
Hid1	PF12722	380 - 529	6e-09	High-temperature-induced dauer-formation protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008749)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04200 AT1G04200 AT1G04200
fragaria_vesca	FvH4_4g01230 FvH4_4g01230 FvH4_4g01230
malus_domestica	MD13G1199900.v1.1 MD16G1199900.v1.1
prunus_persica	Prupe.1G021300_v2.0.a1
pyrus_communis	pycom13g17340 pycom16g16850
rosa_chinensis	RchiOBHm_Chr4g0387781
rosa_laevigata	RLG00000010096
rosa_multiflora	Rmu_sc0008916.1_g000003 Rmu_sc0013958.1_g000003
rosa_roxburghii	Rroxscaffold_5G00334400
rosa_rugosa	Rorug03G0313100 Rorug03G0313200 Rorug03G0313300
rosa_samantha	Rh4AG018300 Rh4CG019500 Rh4DG014100
rosa_wichuraiana	Rw4G001200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	10, 1501
AccB7I	CCANNNNNTGG	1 cut(s)	1543
AccBSI	CCGCTC	1 cut(s)	8
AccI	GTMKAC	2 cut(s)	17, 664
AccII	CGCG	4 cut(s)	25, 44, 49, 174
AciI	CCGC	9 cut(s)	8, 23, 42, 44, 53, 65, 172, 1453, 2191
AclWI	GGATC	2 cut(s)	235, 496
AcoI	YGGCCR	1 cut(s)	846
AcsI	RAATTY	4 cut(s)	781, 949, 1025, 1647
AcuI	CTGAAG	1 cut(s)	753
AcyI	GRCGYC	1 cut(s)	20
AdeI	CACNNNGTG	1 cut(s)	1061
AfaI	GTAC	9 cut(s)	326, 350, 392, 511, 931, 1115, 1364, 2052, 2184
AfiI	CCNNNNNNNGG	4 cut(s)	29, 526, 587, 1543
AflIII	ACRYGT	2 cut(s)	1275, 1697
AjnI	CCWGG	6 cut(s)	218, 505, 586, 745, 1227, 1358
AjuI	GAANNNNNNNTTGG	2 cut(s)	907, 939
AloI	GAACNNNNNNTCC	2 cut(s)	1362, 1394
AluBI	AGCT	9 cut(s)	39, 185, 235, 269, 568, 639, 1617, 1963, 2179
AluI	AGCT	9 cut(s)	39, 185, 235, 269, 568, 639, 1617, 1963, 2179
Alw26I	GTCTC	6 cut(s)	158, 633, 863, 1379, 1572, 1828
AlwI	GGATC	2 cut(s)	235, 496
AoxI	GGCC	5 cut(s)	161, 286, 578, 846, 999
ApeKI	GCWGC	7 cut(s)	620, 773, 776, 1130, 1133, 1963, 2176
ApoI	RAATTY	4 cut(s)	781, 949, 1025, 1647
AseI	ATTAAT	2 cut(s)	1403, 2070
Asp700I	GAANNNNTTC	2 cut(s)	1926, 2105
AspLEI	GCGC	3 cut(s)	27, 49, 2121
AspS9I	GGNCC	6 cut(s)	81, 287, 578, 590, 689, 1064
AsuHPI	GGTGA	3 cut(s)	836, 2101, 2102
AvaII	GGWCC	4 cut(s)	81, 590, 689, 1064
AxyI	CCTNAGG	1 cut(s)	1890
BanI	GGYRCC	2 cut(s)	10, 1501
BbvI	GCAGC	7 cut(s)	632, 785, 788, 1117, 1120, 1950, 2188
BccI	CCATC	4 cut(s)	252, 589, 1232, 2021
BceAI	ACGGC	1 cut(s)	78
BcgI	CGANNNNNNTGC	2 cut(s)	179, 213
BciT130I	CCWGG	6 cut(s)	220, 507, 588, 747, 1229, 1360
BciVI	GTATCC	1 cut(s)	1201
BclI	TGATCA	1 cut(s)	1284
BcoDI	GTCTC	6 cut(s)	158, 633, 863, 1379, 1572, 1828
BfaI	CTAG	4 cut(s)	401, 1481, 1739, 2180
BfmI	CTRYAG	2 cut(s)	771, 853
BfuI	GTATCC	1 cut(s)	1201
BglII	AGATCT	1 cut(s)	439
BisI	GCNGC	9 cut(s)	23, 45, 621, 774, 777, 1131, 1134, 1964, 2177
BlsI	GCNGC	9 cut(s)	24, 46, 622, 775, 778, 1132, 1135, 1965, 2178
BmcAI	AGTACT	3 cut(s)	931, 2052, 2184
Bme1390I	CCNGG	6 cut(s)	220, 507, 588, 747, 1229, 1360
Bme18I	GGWCC	4 cut(s)	81, 590, 689, 1064
BmgT120I	GGNCC	6 cut(s)	81, 287, 578, 590, 689, 1064
BmiI	GGNNCC	3 cut(s)	12, 82, 1503
BmrFI	CCNGG	6 cut(s)	220, 507, 588, 747, 1229, 1360
BmrI	ACTGGG	1 cut(s)	2107
BmsI	GCATC	8 cut(s)	232, 607, 722, 1209, 1234, 1541, 1800, 2002
BmuI	ACTGGG	1 cut(s)	2107
BoxI	GACNNNNGTC	2 cut(s)	86, 855
BpmI	CTGGAG	1 cut(s)	1199
BpuEI	CTTGAG	2 cut(s)	817, 1852
BsaBI	GATNNNNATC	2 cut(s)	1223, 1461
BsaHI	GRCGYC	1 cut(s)	20
BsaJI	CCNNGG	6 cut(s)	42, 586, 1002, 1105, 1358, 1880
BsaXI	ACNNNNNCTCC	2 cut(s)	1362, 1392
Bsc4I	CCNNNNNNNGG	4 cut(s)	29, 526, 587, 1543
Bse1I	ACTGG	4 cut(s)	128, 691, 1067, 2113
Bse21I	CCTNAGG	1 cut(s)	1890
Bse3DI	GCAATG	2 cut(s)	561, 630
Bse8I	GATNNNNATC	2 cut(s)	1223, 1461
BseBI	CCWGG	6 cut(s)	220, 507, 588, 747, 1229, 1360
BseDI	CCNNGG	6 cut(s)	42, 586, 1002, 1105, 1358, 1880
BseGI	GGATG	8 cut(s)	581, 1224, 1462, 1532, 1945, 2017, 2103, 2143
BseJI	GATNNNNATC	2 cut(s)	1223, 1461
BseLI	CCNNNNNNNGG	4 cut(s)	29, 526, 587, 1543
BseMI	GCAATG	2 cut(s)	561, 630
BseMII	CTCAG	5 cut(s)	163, 578, 644, 1035, 1881
BseNI	ACTGG	4 cut(s)	128, 691, 1067, 2113
BseRI	GAGGAG	3 cut(s)	1283, 1367, 2165
BseXI	GCAGC	7 cut(s)	632, 785, 788, 1117, 1120, 1950, 2188
BseYI	CCCAGC	1 cut(s)	27
BsgI	GTGCAG	2 cut(s)	1119, 1451
Bsh1236I	CGCG	4 cut(s)	25, 44, 49, 174
BshFI	GGCC	5 cut(s)	163, 288, 580, 848, 1001
BshNI	GGYRCC	2 cut(s)	10, 1501
BslFI	GGGAC	2 cut(s)	94, 2173
BslI	CCNNNNNNNGG	4 cut(s)	29, 526, 587, 1543
BsmAI	GTCTC	6 cut(s)	158, 633, 863, 1379, 1572, 1828
BsmBI	CGTCTC	1 cut(s)	1379
BsmFI	GGGAC	2 cut(s)	94, 2173
BsmI	GAATGC	1 cut(s)	1329
BsnI	GGCC	5 cut(s)	163, 288, 580, 848, 1001
Bsp1407I	TGTACA	1 cut(s)	324
Bsp143I	GATC	7 cut(s)	75, 240, 439, 488, 1030, 1284, 2078
BspACI	CCGC	9 cut(s)	8, 23, 42, 44, 53, 65, 172, 1453, 2191
BspANI	GGCC	5 cut(s)	163, 288, 580, 848, 1001
BspCNI	CTCAG	5 cut(s)	162, 577, 643, 1036, 1882
BspFNI	CGCG	4 cut(s)	25, 44, 49, 174
BspLI	GGNNCC	3 cut(s)	12, 82, 1503
BspMAI	CTGCAG	2 cut(s)	775, 857
BspPI	GGATC	2 cut(s)	235, 496
BspT107I	GGYRCC	2 cut(s)	10, 1501
BsrBI	CCGCTC	1 cut(s)	8
BsrDI	GCAATG	2 cut(s)	561, 630
BsrGI	TGTACA	1 cut(s)	324
BsrI	ACTGG	4 cut(s)	128, 691, 1067, 2113
BssECI	CCNNGG	6 cut(s)	42, 586, 1002, 1105, 1358, 1880
BssMI	GATC	7 cut(s)	75, 240, 439, 488, 1030, 1284, 2078
BssNI	GRCGYC	1 cut(s)	20
BssT1I	CCWWGG	2 cut(s)	1002, 1105
Bst2UI	CCWGG	6 cut(s)	220, 507, 588, 747, 1229, 1360
Bst4CI	ACNGT	5 cut(s)	1354, 1429, 1517, 1984, 2187
Bst6I	CTCTTC	1 cut(s)	378
BstACI	GRCGYC	1 cut(s)	20
BstAPI	GCANNNNNTGC	1 cut(s)	133
BstAUI	TGTACA	1 cut(s)	324
BstC8I	GCNNGC	3 cut(s)	187, 743, 1327
BstDEI	CTNAG	7 cut(s)	149, 564, 630, 1044, 1301, 1446, 1890
BstDSI	CCRYGG	2 cut(s)	42, 1880
BstEII	GGTNACC	1 cut(s)	1077
BstF5I	GGATG	8 cut(s)	581, 1224, 1462, 1532, 1945, 2017, 2103, 2143
BstFNI	CGCG	4 cut(s)	25, 44, 49, 174
BstHHI	GCGC	3 cut(s)	27, 49, 2121
BstKTI	GATC	7 cut(s)	78, 243, 442, 491, 1033, 1287, 2081
BstMAI	GTCTC	6 cut(s)	158, 633, 863, 1379, 1572, 1828
BstMBI	GATC	7 cut(s)	75, 240, 439, 488, 1030, 1284, 2078
BstMWI	GCNNNNNNNGC	7 cut(s)	19, 133, 191, 317, 1219, 1490, 1499
BstNI	CCWGG	6 cut(s)	220, 507, 588, 747, 1229, 1360
BstNSI	RCATGY	3 cut(s)	1013, 1279, 1701
BstPAI	GACNNNNGTC	2 cut(s)	86, 855
BstPI	GGTNACC	1 cut(s)	1077
BstSCI	CCNGG	6 cut(s)	218, 505, 586, 745, 1227, 1358
BstSFI	CTRYAG	2 cut(s)	771, 853
BstUI	CGCG	4 cut(s)	25, 44, 49, 174
BstV1I	GCAGC	7 cut(s)	632, 785, 788, 1117, 1120, 1950, 2188
BstX2I	RGATCY	1 cut(s)	439
BstXI	CCANNNNNNTGG	1 cut(s)	2172
BstYI	RGATCY	1 cut(s)	439
Bsu36I	CCTNAGG	1 cut(s)	1890
BsuI	GTATCC	1 cut(s)	1201
BsuRI	GGCC	5 cut(s)	163, 288, 580, 848, 1001
BtgI	CCRYGG	2 cut(s)	42, 1880
BtsCI	GGATG	8 cut(s)	581, 1224, 1462, 1532, 1945, 2017, 2103, 2143
BtsI	GCAGTG	1 cut(s)	327
BtsIMutI	CAGTG	3 cut(s)	327, 684, 1434
Cac8I	GCNNGC	3 cut(s)	187, 743, 1327
CfoI	GCGC	3 cut(s)	27, 49, 2121
Cfr13I	GGNCC	6 cut(s)	81, 287, 578, 590, 689, 1064
Cfr42I	CCGCGG	1 cut(s)	45
CseI	GACGC	2 cut(s)	28, 38
Csp6I	GTAC	9 cut(s)	325, 349, 391, 510, 930, 1114, 1363, 2051, 2183
CviAII	CATG	9 cut(s)	252, 544, 863, 1010, 1276, 1498, 1508, 1698, 2082
CviQI	GTAC	9 cut(s)	325, 349, 391, 510, 930, 1114, 1363, 2051, 2183
DdeI	CTNAG	7 cut(s)	149, 564, 630, 1044, 1301, 1446, 1890
DpnI	GATC	7 cut(s)	77, 242, 441, 490, 1032, 1286, 2080
DpnII	GATC	7 cut(s)	75, 240, 439, 488, 1030, 1284, 2078
DraI	TTTAAA	1 cut(s)	345
DraIII	CACNNNGTG	1 cut(s)	1061
EaeI	YGGCCR	1 cut(s)	846
Eam1104I	CTCTTC	1 cut(s)	378
EarI	CTCTTC	1 cut(s)	378
EciI	GGCGGA	1 cut(s)	80
Eco130I	CCWWGG	2 cut(s)	1002, 1105
Eco147I	AGGCCT	1 cut(s)	1001
Eco47I	GGWCC	4 cut(s)	81, 590, 689, 1064
Eco57I	CTGAAG	1 cut(s)	753
Eco81I	CCTNAGG	1 cut(s)	1890
Eco91I	GGTNACC	1 cut(s)	1077
EcoO109I	RGGNCCY	1 cut(s)	81
EcoO65I	GGTNACC	1 cut(s)	1077
EcoRI	GAATTC	1 cut(s)	1647
EcoRII	CCWGG	6 cut(s)	218, 505, 586, 745, 1227, 1358
EcoT14I	CCWWGG	2 cut(s)	1002, 1105
EcoT22I	ATGCAT	2 cut(s)	1534, 1815
ErhI	CCWWGG	2 cut(s)	1002, 1105
Esp3I	CGTCTC	1 cut(s)	1379
FaeI	CATG	9 cut(s)	255, 547, 866, 1013, 1279, 1501, 1511, 1701, 2085
FaqI	GGGAC	2 cut(s)	94, 2173
FatI	CATG	9 cut(s)	251, 543, 862, 1009, 1275, 1497, 1507, 1697, 2081
FauI	CCCGC	1 cut(s)	1446
FauNDI	CATATG	3 cut(s)	1528, 1870, 2128
FbaI	TGATCA	1 cut(s)	1284
FblI	GTMKAC	2 cut(s)	17, 664
Fnu4HI	GCNGC	9 cut(s)	23, 45, 621, 774, 777, 1131, 1134, 1964, 2177
FokI	GGATG	8 cut(s)	568, 1211, 1469, 1519, 1932, 2024, 2110, 2130
Fsp4HI	GCNGC	9 cut(s)	23, 45, 621, 774, 777, 1131, 1134, 1964, 2177
FspBI	CTAG	4 cut(s)	401, 1481, 1739, 2180
GlaI	GCGC	3 cut(s)	26, 48, 2120
GluI	GCNGC	9 cut(s)	23, 45, 621, 774, 777, 1131, 1134, 1964, 2177
GsaI	CCCAGC	1 cut(s)	31
GsuI	CTGGAG	1 cut(s)	1199
HaeIII	GGCC	5 cut(s)	163, 288, 580, 848, 1001
HgaI	GACGC	2 cut(s)	28, 38
HhaI	GCGC	3 cut(s)	27, 49, 2121
Hin1I	GRCGYC	1 cut(s)	20
Hin1II	CATG	9 cut(s)	255, 547, 866, 1013, 1279, 1501, 1511, 1701, 2085
Hin6I	GCGC	3 cut(s)	25, 47, 2119
HinP1I	GCGC	3 cut(s)	25, 47, 2119
HincII	GTYRAC	3 cut(s)	18, 561, 1695
HindII	GTYRAC	3 cut(s)	18, 561, 1695
HindIII	AAGCTT	2 cut(s)	183, 233
HinfI	GANTC	6 cut(s)	98, 923, 1310, 1885, 1942, 2140
HpaI	GTTAAC	1 cut(s)	1695
HphI	GGTGA	3 cut(s)	836, 2101, 2102
Hpy166II	GTNNAC	9 cut(s)	18, 260, 325, 561, 604, 665, 1513, 1695, 2109
Hpy188I	TCNGA	8 cut(s)	75, 118, 240, 733, 982, 1123, 1572, 1761
Hpy8I	GTNNAC	9 cut(s)	18, 260, 325, 561, 604, 665, 1513, 1695, 2109
Hpy99I	CGWCG	4 cut(s)	19, 22, 92, 98
HpyAV	CCTTC	8 cut(s)	94, 300, 301, 530, 702, 728, 821, 2087
HpyCH4III	ACNGT	5 cut(s)	1354, 1429, 1517, 1984, 2187
HpyCH4IV	ACGT	2 cut(s)	1372, 1951
HpyF10VI	GCNNNNNNNGC	7 cut(s)	19, 133, 191, 317, 1219, 1490, 1499
HpyF3I	CTNAG	7 cut(s)	149, 564, 630, 1044, 1301, 1446, 1890
HpySE526I	ACGT	2 cut(s)	1372, 1951
Hsp92I	GRCGYC	1 cut(s)	20
Hsp92II	CATG	9 cut(s)	255, 547, 866, 1013, 1279, 1501, 1511, 1701, 2085
HspAI	GCGC	3 cut(s)	25, 47, 2119
Ksp22I	TGATCA	1 cut(s)	1284
KspAI	GTTAAC	1 cut(s)	1695
KspI	CCGCGG	1 cut(s)	45
Kzo9I	GATC	7 cut(s)	75, 240, 439, 488, 1030, 1284, 2078
LmnI	GCTCC	3 cut(s)	5, 44, 1252
Lsp1109I	GCAGC	7 cut(s)	632, 785, 788, 1117, 1120, 1950, 2188
LweI	GCATC	8 cut(s)	232, 607, 722, 1209, 1234, 1541, 1800, 2002
MaeI	CTAG	4 cut(s)	401, 1481, 1739, 2180
MaeII	ACGT	2 cut(s)	1372, 1951
MaeIII	GTNAC	3 cut(s)	371, 1049, 1077
MalI	GATC	7 cut(s)	77, 242, 441, 490, 1032, 1286, 2080
MbiI	CCGCTC	1 cut(s)	8
MboI	GATC	7 cut(s)	75, 240, 439, 488, 1030, 1284, 2078
MboII	GAAGA	4 cut(s)	395, 608, 1802, 2113
MflI	RGATCY	1 cut(s)	439
MlyI	GAGTC	2 cut(s)	107, 2149
Mph1103I	ATGCAT	2 cut(s)	1534, 1815
MroXI	GAANNNNTTC	2 cut(s)	1926, 2105
MseI	TTAA	8 cut(s)	315, 344, 537, 1320, 1403, 1694, 1853, 2070
MslI	CAYNNNNRTG	2 cut(s)	894, 2170
MspA1I	CMGCKG	3 cut(s)	44, 55, 2193
MspR9I	CCNGG	6 cut(s)	220, 507, 588, 747, 1229, 1360
Mva1269I	GAATGC	1 cut(s)	1329
MvaI	CCWGG	6 cut(s)	220, 507, 588, 747, 1229, 1360
MvnI	CGCG	4 cut(s)	25, 44, 49, 174
MwoI	GCNNNNNNNGC	7 cut(s)	19, 133, 191, 317, 1219, 1490, 1499
NdeI	CATATG	3 cut(s)	1528, 1870, 2128
NdeII	GATC	7 cut(s)	75, 240, 439, 488, 1030, 1284, 2078
NlaIII	CATG	9 cut(s)	255, 547, 866, 1013, 1279, 1501, 1511, 1701, 2085
NlaIV	GGNNCC	3 cut(s)	12, 82, 1503
NmuCI	GTSAC	1 cut(s)	371
NsiI	ATGCAT	2 cut(s)	1534, 1815
NspI	RCATGY	3 cut(s)	1013, 1279, 1701
PceI	AGGCCT	1 cut(s)	1001
PciI	ACATGT	2 cut(s)	1275, 1697
PcsI	WCGNNNNNNNCGW	2 cut(s)	84, 93
PctI	GAATGC	1 cut(s)	1329
PdmI	GAANNNNTTC	2 cut(s)	1926, 2105
PfeI	GAWTC	4 cut(s)	923, 1310, 1885, 1942
PflMI	CCANNNNNTGG	1 cut(s)	1543
PfoI	TCCNGGA	1 cut(s)	1227
PkrI	GCNGC	9 cut(s)	24, 46, 622, 775, 778, 1132, 1135, 1965, 2178
PleI	GAGTC	2 cut(s)	106, 2148
PpsI	GAGTC	2 cut(s)	106, 2148
PpuMI	RGGWCCY	1 cut(s)	81
PscI	ACATGT	2 cut(s)	1275, 1697
PshAI	GACNNNNGTC	2 cut(s)	86, 855
PshBI	ATTAAT	2 cut(s)	1403, 2070
Psp5II	RGGWCCY	1 cut(s)	81
Psp6I	CCWGG	6 cut(s)	218, 505, 586, 745, 1227, 1358
PspEI	GGTNACC	1 cut(s)	1077
PspFI	CCCAGC	1 cut(s)	27
PspGI	CCWGG	6 cut(s)	218, 505, 586, 745, 1227, 1358
PspN4I	GGNNCC	3 cut(s)	12, 82, 1503
PspPI	GGNCC	6 cut(s)	81, 287, 578, 590, 689, 1064
PspPPI	RGGWCCY	1 cut(s)	81
PstI	CTGCAG	2 cut(s)	775, 857
PsuI	RGATCY	1 cut(s)	439
RsaI	GTAC	9 cut(s)	326, 350, 392, 511, 931, 1115, 1364, 2052, 2184
RsaNI	GTAC	9 cut(s)	325, 349, 391, 510, 930, 1114, 1363, 2051, 2183
RseI	CAYNNNNRTG	2 cut(s)	894, 2170
SacII	CCGCGG	1 cut(s)	45
SalI	GTCGAC	1 cut(s)	16
SaqAI	TTAA	8 cut(s)	315, 344, 537, 1320, 1403, 1694, 1853, 2070
SatI	GCNGC	9 cut(s)	23, 45, 621, 774, 777, 1131, 1134, 1964, 2177
Sau3AI	GATC	7 cut(s)	75, 240, 439, 488, 1030, 1284, 2078
Sau96I	GGNCC	6 cut(s)	81, 287, 578, 590, 689, 1064
ScaI	AGTACT	3 cut(s)	931, 2052, 2184
SchI	GAGTC	2 cut(s)	107, 2149
ScrFI	CCNGG	6 cut(s)	220, 507, 588, 747, 1229, 1360
SfaNI	GCATC	8 cut(s)	232, 607, 722, 1209, 1234, 1541, 1800, 2002
SfcI	CTRYAG	2 cut(s)	771, 853
Sfr303I	CCGCGG	1 cut(s)	45
SgrBI	CCGCGG	1 cut(s)	45
SgrDI	CGTCGACG	1 cut(s)	16
SinI	GGWCC	4 cut(s)	81, 590, 689, 1064
SmiMI	CAYNNNNRTG	2 cut(s)	894, 2170
SmlI	CTYRAG	2 cut(s)	832, 1831
SmoI	CTYRAG	2 cut(s)	832, 1831
SseBI	AGGCCT	1 cut(s)	1001
SsiI	CCGC	9 cut(s)	8, 23, 42, 44, 53, 65, 172, 1453, 2191
SspI	AATATT	1 cut(s)	1851
SspMI	CTAG	4 cut(s)	401, 1481, 1739, 2180
StuI	AGGCCT	1 cut(s)	1001
StyD4I	CCNGG	6 cut(s)	218, 505, 586, 745, 1227, 1358
StyI	CCWWGG	2 cut(s)	1002, 1105
TaaI	ACNGT	5 cut(s)	1354, 1429, 1517, 1984, 2187
TaiI	ACGT	2 cut(s)	1375, 1954
TaqI	TCGA	5 cut(s)	17, 138, 450, 695, 1098
TatI	WGTACW	6 cut(s)	324, 390, 929, 1113, 2050, 2182
TauI	GCSGC	2 cut(s)	25, 47
TfiI	GAWTC	4 cut(s)	923, 1310, 1885, 1942
Tru1I	TTAA	8 cut(s)	315, 344, 537, 1320, 1403, 1694, 1853, 2070
Tru9I	TTAA	8 cut(s)	315, 344, 537, 1320, 1403, 1694, 1853, 2070
TscAI	CASTG	3 cut(s)	327, 691, 1434
TseFI	GTSAC	1 cut(s)	371
TseI	GCWGC	7 cut(s)	620, 773, 776, 1130, 1133, 1963, 2176
Tsp45I	GTSAC	1 cut(s)	371
TspDTI	ATGAA	8 cut(s)	420, 512, 532, 1302, 1389, 1640, 2114, 2145
TspGWI	ACGGA	2 cut(s)	1820, 1897
TspRI	CASTG	3 cut(s)	327, 691, 1434
Van91I	CCANNNNNTGG	1 cut(s)	1543
VpaK11BI	GGWCC	4 cut(s)	81, 590, 689, 1064
VspI	ATTAAT	2 cut(s)	1403, 2070
XapI	RAATTY	4 cut(s)	781, 949, 1025, 1647
XbaI	TCTAGA	1 cut(s)	400
XceI	RCATGY	3 cut(s)	1013, 1279, 1701
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1391
XmiI	GTMKAC	2 cut(s)	17, 664
XmnI	GAANNNNTTC	2 cut(s)	1926, 2105
XspI	CTAG	4 cut(s)	401, 1481, 1739, 2180
ZrmI	AGTACT	3 cut(s)	931, 2052, 2184
Zsp2I	ATGCAT	2 cut(s)	1534, 1815

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.