Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0006556

Physical Location & Seq

Genomic Coordinates Forward (+)

18859205 .. 18864548

Gene Structure 5344 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1206700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2685 bp

ATGACTCTCGTACCCAGTCTTCAACTTTACCCGACGAACTTGTTCGACTCGTTCCAGAGATCCTTGTCGAAATTCAATGGCCCTCACATCCAGTTCTTTAGGTACGGCCACGGCTCCTCAACTCCTTTCAATAAGCACACTTTCTATGCCACCCACTCCATTATCAGCTCTCCTGACCAAAACCCAGTAAGGAAATCGAATTTTGTTGGGAGAAATCGATCCATTTATCAGTATAAACCGAGGAGGAATTTGTGTACGAGTAGTTGGATTGATAAATGGAATGAATCCCACAAGCGTAATCGCCTGAAACCGCCTCAGGCTGTGTTGGATTATCAGAGTAGTGAAAGTGGGAATTTGAGTGGTTCGGGAAATGGCGGTGGTAGTACAATGCAGAAGATTGTGGAGAAATTGACGAAATTCGGGTACGTTGACGATAGTAATGAGGGTAAAGGGGAAGCGAGGGAGAGAGTGATTGAGAAGGGTTCTGTGGAGGATATATTTTATGTTGAGGAAGGAATGCTGCCAAATTCGCGAGGTGGGTTCTCGGCGGAATCACCATTAGGGATAGAGAATGTGTTTGGAAGTGATGGTAAGGTGAGGTTTCCGTGGGAAAAGCCGGCAGAGGAAGAGAAGCAAGATCAGGGTTCGGTGAGGAGGAAGAGTAGGACTTCAGTGGCGGAATTGACTCTTCCGGAATCAGAGTTGAGGAGGCTGAGGAATTTGACATTTCAGAAGAAGCACAAGACTAAGATTGGAGGTGCGGGTGTTACTCAAGCCGTGGTGGACATGATCCACGAGAGATGGAAGACTTCAGAGATTGTGAGGCTGAAAGTTGAAGGTCCACCTGCTCTTAACATGAAGAGAATGCATGAGATATTGGAGCGAAAAACTGGTGGTTTGGTGGTCTGGAGGTCTGGTACTTCTCTTTCTTTGTACAGAGGTGTGAGCTATGAAGTTCCTTCAGTGCAACTAAACAAGCGCATTTACAAAAAAAAAGAAATTTCTTCTTCTACATCTTTTCCGAACGTTGCTGATAAATCTTTGGGAGACTTTGTTGAGCTTGCTTCTTATGGTAATGTAAATACACCCCAAGAAAAGCCGGAGAGTACTTCCCTGGAGAAGAAAGACACAGACCAATTGCCAGAAGTGAAGTATGAAGATGAAGTAGACAAACTTTTAGATAGTTTAGGTCCTAGATTCAAAGATTGGCCTGGATGTGATCCATTACCTGTAGATGCAGATATGCTTCCAGGGTTAGTTCCTGGTTATGAACAACCCTTCAGAGTACTTCCGTATGGTGTCCGATCTTCCCTTGGTTTACAGGAGGCAACATCTTTGAGAAGACTGGCTAGGGTTCTTCCACCACATTTTGCTTTAGGTCGAAGCAGACAGCTCCAGGGTCTGGCAGTGGCCATGGCTAAATTATGGGAACGAAGTTTGATAGCAAAGATTGCACTGAAACGTGGTGTTCAGCTGACTACTAGTGAGCGAATGGCTGAAGACATCAAGAGATTGACTGGGGGTGTGCTGCTATCTCGAAACAAGGACTTCTTGGTCTTCTATAGGGGGAAGAATTTTTTGTCTCCAGAAGTCACTGAAGCGTTACTGGAAAGGGAGAGATTGGCGAAATCCCTTCAAGATGAAGAGGAGCAGGCAAGGTTGAGAGCGTCAGCTATGGTTATACCAAATGTTGAACAAGCTCAACACTTTGGTACAGCTGGTACACTTGCAGAGACTTTGGATGCAGATGCTAAGTGGGGAAAGATGATGGATAATCATCATAAGAAAAAAGTGATGCAAGAAGCAGACATATTAAGGCATGCCAATCTTGTCAGAAAGCTTGAACGAAAGCTTGCCTTTGCTGAAAGAAAGTTAATGAAAGCTGAACAAGCCTTATCTAAGGTAGAGGAGTGTTTGAAACCATCTACGCTACAAGCTGACCCAGACAGCATTACTGATGAAGAGAGGTTTATGTTTCGTAAGCTTGGTTTACGGATGAAGGCTTTCTTACTTCTTGGTAGACGTGGAGTGTTTGATGGTACAGTGGAGAATATGCATTTGCACTGGAAATACCGGGAATTGGTCAAGATAATGGTGAATGCTAAAAGTTTTGAGCAGGTGAAAAAAATTGCATTGGCACTTGAAGCTGAGAGCGGTGGTGTCTTAGTTTCAGTGGACAAAGTTTCCAAAAAGTTTGCTATAATTGTGTACCGGGGAAAGGACTATCACCGACCTTCTACATTGAGGCCAAAGAATCTCTTGACAAAAAGGAAAGCGTTGGCACGCTCTATTGAGATCCAACGACAGGAGGCTCTTCTAAAACATATTTCAGTGGTGCAGAGTAAGGTGGACACACTTCGATCCGAAATAGAACAAATGGATGTTGTGAAAGAGCGTGGAGATGAAGTATTGTACAACAAATTAGATTCTTCTTATCCTACTGATGATGACGATGATTCCGAGGAAGAAGATGTTTATCTTGAAACGTACAGCGCAGAAGATAATGGTGAAGATGAAGGCAATTACTCAACTCATGATCCTCACCTGGAAACGAATTTTCCTTATCATATCCAGAATCAGGCTTCTCAAACAGAATTGGAAGTTCCTCAACAATATGTGCATGCAAGGCCCGAGGGCTCACTAGACGATGATTACCAAGATGAAGAAGATAACTCCCTACAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000373 GO:0000375 GO:0000377 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008380 GO:0009507 GO:0009536 GO:0009791 GO:0009987 GO:0010154 GO:0010467 GO:0016070 GO:0022414 GO:0032501 GO:0032502 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0071704 GO:0090304 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CRS1_YhbY

Protein Analysis

895

Amino Acids

101.54

Weight (kDa)

8.25

Isoelectric Point (pI)

51.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CRS1_YhbY	PF01985	230 - 313	1e-19	CRS1 / YhbY (CRM) domain
CRS1_YhbY	PF01985	441 - 522	5.8e-13	CRS1 / YhbY (CRM) domain
CRS1_YhbY	PF01985	651 - 738	1.4e-18	CRS1 / YhbY (CRM) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006556)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G23070
fragaria_vesca	FvH4_3g28120 FvH4_3g28120 FvH4_3g28120 FvH4_3g28120 FvH4_3g28120 FvH4_3g28120
malus_domestica	MD13G1206700.v1.1 MD16G1208000.v1.1
prunus_persica	Prupe.1G030300_v2.0.a1
pyrus_communis	pycom13g17910 pycom16g17530
rosa_chinensis	RchiOBHm_Chr5g0050811
rosa_laevigata	RLG00000034737 RLG00000034740
rosa_multiflora	Rmu_co8235889.1_g000001 Rmu_sc0004083.1_g000002 Rmu_sc0007394.1_g000006
rosa_roxburghii	Rroxscaffold_1G00029900 Rroxscaffold_1G00029910
rosa_rugosa	Rorug05G0264200.1
rosa_samantha	Rh5AG336200 Rh5BG345800 Rh5CG373500 Rh5DG358800
rosa_wichuraiana	Rw5G031710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	853, 2107
AasI	GACNNNNNNGTC	1 cut(s)	1553
Acc36I	ACCTGC	2 cut(s)	853, 2107
AccB7I	CCANNNNNTGG	1 cut(s)	1402
AccBSI	CCGCTC	1 cut(s)	2154
AccI	GTMKAC	2 cut(s)	1167, 2020
AccII	CGCG	1 cut(s)	532
AccIII	TCCGGA	1 cut(s)	691
AciI	CCGC	6 cut(s)	311, 375, 548, 677, 761, 2154
AclI	AACGTT	1 cut(s)	1026
AclWI	GGATC	7 cut(s)	54, 213, 784, 1214, 2290, 2355, 2531
AcoI	YGGCCR	2 cut(s)	106, 1410
AcuI	CTGAAG	6 cut(s)	654, 795, 945, 1264, 1518, 1617
AfiI	CCNNNNNNNGG	5 cut(s)	1402, 2080, 2218, 2305, 2578
AhlI	ACTAGT	1 cut(s)	1481
AjiI	CACGTC	1 cut(s)	2024
AjnI	CCWGG	6 cut(s)	1113, 1210, 1249, 1261, 1395, 2544
Alw26I	GTCTC	3 cut(s)	1041, 1587, 1727
AlwI	GGATC	7 cut(s)	54, 213, 784, 1214, 2290, 2355, 2531
AlwNI	CAGNNNCTG	1 cut(s)	1402
Ama87I	CYCGRG	1 cut(s)	2630
Aor13HI	TCCGGA	1 cut(s)	691
AoxI	GGCC	6 cut(s)	79, 106, 1208, 1410, 2246, 2627
ApeKI	GCWGC	2 cut(s)	520, 1528
Asp700I	GAANNNNTTC	2 cut(s)	41, 2003
AspLEI	GCGC	2 cut(s)	981, 2495
AspS9I	GGNCC	4 cut(s)	80, 839, 1190, 2628
AsuC2I	CCSGG	2 cut(s)	2075, 2213
AsuHPI	GGTGA	8 cut(s)	546, 607, 661, 2107, 2131, 2219, 2519, 2534
AvaI	CYCGRG	1 cut(s)	2630
AvaII	GGWCC	2 cut(s)	839, 1190
AxyI	CCTNAGG	1 cut(s)	315
BaeI	ACNNNNGTAYC	1 cut(s)	27
BalI	TGGCCA	1 cut(s)	1412
BanII	GRGCYC	1 cut(s)	2639
BarI	GAAGNNNNNNTAC	1 cut(s)	35
BauI	CACGAG	1 cut(s)	794
BbsI	GAAGAC	5 cut(s)	11, 812, 1348, 1506, 1549
BbvCI	CCTCAGC	1 cut(s)	713
BbvI	GCAGC	2 cut(s)	507, 1515
BccI	CCATC	5 cut(s)	581, 795, 1762, 1930, 2030
BceAI	ACGGC	3 cut(s)	121, 127, 761
BciT130I	CCWGG	6 cut(s)	1115, 1212, 1251, 1263, 1397, 2546
BcnI	CCSGG	2 cut(s)	2075, 2213
BcoDI	GTCTC	3 cut(s)	1041, 1587, 1727
BcuI	ACTAGT	1 cut(s)	1481
BfaI	CTAG	4 cut(s)	1194, 1350, 1482, 2642
BfmI	CTRYAG	2 cut(s)	1230, 1561
BfuAI	ACCTGC	2 cut(s)	853, 2107
BisI	GCNGC	2 cut(s)	521, 1529
BlsI	GCNGC	2 cut(s)	522, 1530
BmcAI	AGTACT	2 cut(s)	1108, 1287
Bme1390I	CCNGG	8 cut(s)	1115, 1212, 1251, 1263, 1397, 2075, 2213, 2546
Bme18I	GGWCC	2 cut(s)	839, 1190
BmeT110I	CYCGRG	1 cut(s)	2630
BmgBI	CACGTC	1 cut(s)	2024
BmgT120I	GGNCC	4 cut(s)	80, 839, 1190, 2628
BmiI	GGNNCC	1 cut(s)	115
BmrFI	CCNGG	8 cut(s)	1115, 1212, 1251, 1263, 1397, 2075, 2213, 2546
BmrI	ACTGGG	3 cut(s)	9, 179, 1527
BmsI	GCATC	4 cut(s)	1225, 1732, 1738, 1785
BmuI	ACTGGG	3 cut(s)	9, 179, 1527
BpiI	GAAGAC	5 cut(s)	11, 812, 1348, 1506, 1549
BpmI	CTGGAG	4 cut(s)	928, 1136, 1379, 1569
Bpu10I	CCTNAGC	1 cut(s)	713
BpuEI	CTTGAG	1 cut(s)	756
BpuMI	CCSGG	2 cut(s)	2075, 2213
Bsa29I	ATCGAT	1 cut(s)	217
BsaBI	GATNNNNATC	2 cut(s)	1776, 2475
BsaWI	WCCGGW	1 cut(s)	691
BsaXI	ACNNNNNCTCC	8 cut(s)	646, 676, 901, 931, 1038, 1068, 2391, 2421
Bsc4I	CCNNNNNNNGG	5 cut(s)	1402, 2080, 2218, 2305, 2578
Bse118I	RCCGGY	1 cut(s)	616
Bse1I	ACTGG	8 cut(s)	15, 91, 185, 895, 1350, 1522, 1611, 2069
Bse21I	CCTNAGG	1 cut(s)	315
Bse8I	GATNNNNATC	2 cut(s)	1776, 2475
BseAI	TCCGGA	1 cut(s)	691
BseBI	CCWGG	6 cut(s)	1115, 1212, 1251, 1263, 1397, 2546
BseCI	ATCGAT	1 cut(s)	217
BseGI	GGATG	5 cut(s)	87, 1220, 1747, 2001, 2386
BseJI	GATNNNNATC	2 cut(s)	1776, 2475
BseLI	CCNNNNNNNGG	5 cut(s)	1402, 2080, 2218, 2305, 2578
BseMII	CTCAG	3 cut(s)	329, 704, 2139
BseNI	ACTGG	8 cut(s)	15, 91, 185, 895, 1350, 1522, 1611, 2069
BseRI	GAGGAG	6 cut(s)	106, 256, 667, 721, 1661, 1922
BseXI	GCAGC	2 cut(s)	507, 1515
BsgI	GTGCAG	1 cut(s)	2357
Bsh1236I	CGCG	1 cut(s)	532
BshFI	GGCC	6 cut(s)	81, 108, 1210, 1412, 2248, 2629
BshVI	ATCGAT	1 cut(s)	217
BsiHKCI	CYCGRG	1 cut(s)	2630
BsiSI	CCGG	5 cut(s)	617, 692, 1100, 2074, 2212
BslI	CCNNNNNNNGG	5 cut(s)	1402, 2080, 2218, 2305, 2578
BsmAI	GTCTC	3 cut(s)	1041, 1587, 1727
BsmI	GAATGC	3 cut(s)	522, 870, 2104
BsnI	GGCC	6 cut(s)	81, 108, 1210, 1412, 2248, 2629
BsoBI	CYCGRG	1 cut(s)	2630
Bsp1286I	GDGCHC	1 cut(s)	2639
Bsp13I	TCCGGA	1 cut(s)	691
Bsp1407I	TGTACA	2 cut(s)	933, 2412
Bsp143I	GATC	9 cut(s)	59, 218, 637, 789, 1219, 1304, 2295, 2360, 2536
Bsp19I	CCATGG	1 cut(s)	1413
Bsp68I	TCGCGA	1 cut(s)	532
BspACI	CCGC	6 cut(s)	311, 375, 548, 677, 761, 2154
BspANI	GGCC	6 cut(s)	81, 108, 1210, 1412, 2248, 2629
BspCNI	CTCAG	3 cut(s)	328, 705, 2140
BspDI	ATCGAT	1 cut(s)	217
BspEI	TCCGGA	1 cut(s)	691
BspFNI	CGCG	1 cut(s)	532
BspHI	TCATGA	1 cut(s)	2533
BspLI	GGNNCC	1 cut(s)	115
BspMI	ACCTGC	2 cut(s)	853, 2107
BspPI	GGATC	7 cut(s)	54, 213, 784, 1214, 2290, 2355, 2531
BspQI	GCTCTTC	1 cut(s)	2319
BsrBI	CCGCTC	1 cut(s)	2154
BsrFI	RCCGGY	1 cut(s)	616
BsrGI	TGTACA	2 cut(s)	933, 2412
BsrI	ACTGG	8 cut(s)	15, 91, 185, 895, 1350, 1522, 1611, 2069
BssAI	RCCGGY	1 cut(s)	616
BssMI	GATC	9 cut(s)	59, 218, 637, 789, 1219, 1304, 2295, 2360, 2536
BssSI	CACGAG	1 cut(s)	794
BssT1I	CCWWGG	2 cut(s)	1312, 1413
Bst2BI	CACGAG	1 cut(s)	794
Bst2UI	CCWGG	6 cut(s)	1115, 1212, 1251, 1263, 1397, 2546
Bst4CI	ACNGT	1 cut(s)	2044
Bst6I	CTCTTC	7 cut(s)	621, 653, 693, 854, 1638, 1956, 2319
BstAPI	GCANNNNNTGC	1 cut(s)	1451
BstAUI	TGTACA	2 cut(s)	933, 2412
BstC8I	GCNNGC	7 cut(s)	618, 1062, 1653, 1821, 1854, 2284, 2622
BstDEI	CTNAG	7 cut(s)	315, 713, 747, 1752, 1899, 2148, 2164
BstDSI	CCRYGG	4 cut(s)	109, 605, 777, 1413
BstF5I	GGATG	5 cut(s)	87, 1220, 1747, 2001, 2386
BstFNI	CGCG	1 cut(s)	532
BstHHI	GCGC	2 cut(s)	981, 2495
BstKTI	GATC	9 cut(s)	62, 221, 640, 792, 1222, 1307, 2298, 2363, 2539
BstMAI	GTCTC	3 cut(s)	1041, 1587, 1727
BstMBI	GATC	9 cut(s)	59, 218, 637, 789, 1219, 1304, 2295, 2360, 2536
BstMWI	GCNNNNNNNGC	5 cut(s)	529, 1451, 1889, 2144, 2626
BstNI	CCWGG	6 cut(s)	1115, 1212, 1251, 1263, 1397, 2546
BstNSI	RCATGY	2 cut(s)	1823, 2624
BstSCI	CCNGG	8 cut(s)	1113, 1210, 1249, 1261, 1395, 2073, 2211, 2544
BstSFI	CTRYAG	2 cut(s)	1230, 1561
BstUI	CGCG	1 cut(s)	532
BstV1I	GCAGC	2 cut(s)	507, 1515
BstV2I	GAAGAC	5 cut(s)	11, 812, 1348, 1506, 1549
BstX2I	RGATCY	2 cut(s)	59, 2295
BstYI	RGATCY	2 cut(s)	59, 2295
Bsu15I	ATCGAT	1 cut(s)	217
Bsu36I	CCTNAGG	1 cut(s)	315
BsuRI	GGCC	6 cut(s)	81, 108, 1210, 1412, 2248, 2629
BsuTUI	ATCGAT	1 cut(s)	217
BtgI	CCRYGG	4 cut(s)	109, 605, 777, 1413
BtrI	CACGTC	1 cut(s)	2024
BtsCI	GGATG	5 cut(s)	87, 1220, 1747, 2001, 2386
BtsI	GCAGTG	1 cut(s)	1413
BtsIMutI	CAGTG	9 cut(s)	678, 969, 1413, 1454, 1593, 2049, 2062, 2178, 2337
BtuMI	TCGCGA	1 cut(s)	532
BveI	ACCTGC	2 cut(s)	853, 2107
Cac8I	GCNNGC	7 cut(s)	618, 1062, 1653, 1821, 1854, 2284, 2622
CaiI	CAGNNNCTG	1 cut(s)	1402
CciI	TCATGA	1 cut(s)	2533
CfoI	GCGC	2 cut(s)	981, 2495
Cfr10I	RCCGGY	1 cut(s)	616
Cfr13I	GGNCC	4 cut(s)	80, 839, 1190, 2628
ClaI	ATCGAT	1 cut(s)	217
CseI	GACGC	1 cut(s)	1656
CviAII	CATG	7 cut(s)	787, 856, 869, 1414, 1820, 2534, 2621
DdeI	CTNAG	7 cut(s)	315, 713, 747, 1752, 1899, 2148, 2164
DpnI	GATC	9 cut(s)	61, 220, 639, 791, 1221, 1306, 2297, 2362, 2538
DpnII	GATC	9 cut(s)	59, 218, 637, 789, 1219, 1304, 2295, 2360, 2536
DrdI	GACNNNNNNGTC	1 cut(s)	1553
DseDI	GACNNNNNNGTC	1 cut(s)	1553
EaeI	YGGCCR	2 cut(s)	106, 1410
Eam1104I	CTCTTC	7 cut(s)	621, 653, 693, 854, 1638, 1956, 2319
EarI	CTCTTC	7 cut(s)	621, 653, 693, 854, 1638, 1956, 2319
EciI	GGCGGA	2 cut(s)	563, 692
Eco130I	CCWWGG	2 cut(s)	1312, 1413
Eco24I	GRGCYC	1 cut(s)	2639
Eco47I	GGWCC	2 cut(s)	839, 1190
Eco57I	CTGAAG	6 cut(s)	654, 795, 945, 1264, 1518, 1617
Eco81I	CCTNAGG	1 cut(s)	315
Eco88I	CYCGRG	1 cut(s)	2630
EcoO109I	RGGNCCY	1 cut(s)	1190
EcoRII	CCWGG	6 cut(s)	1113, 1210, 1249, 1261, 1395, 2544
EcoT14I	CCWWGG	2 cut(s)	1312, 1413
EcoT22I	ATGCAT	2 cut(s)	870, 2058
EcoT38I	GRGCYC	1 cut(s)	2639
ErhI	CCWWGG	2 cut(s)	1312, 1413
FaeI	CATG	7 cut(s)	790, 859, 872, 1417, 1823, 2537, 2624
FalI	AAGNNNNNCTT	8 cut(s)	1535, 1567, 1841, 1873, 1991, 2023, 2243, 2275
FatI	CATG	7 cut(s)	786, 855, 868, 1413, 1819, 2533, 2620
FauI	CCCGC	1 cut(s)	754
FblI	GTMKAC	2 cut(s)	1167, 2020
Fnu4HI	GCNGC	2 cut(s)	521, 1529
FokI	GGATG	5 cut(s)	74, 1227, 1754, 2008, 2393
FriOI	GRGCYC	1 cut(s)	2639
Fsp4HI	GCNGC	2 cut(s)	521, 1529
FspBI	CTAG	4 cut(s)	1194, 1350, 1482, 2642
GlaI	GCGC	2 cut(s)	980, 2494
GluI	GCNGC	2 cut(s)	521, 1529
GsuI	CTGGAG	4 cut(s)	928, 1136, 1379, 1569
HaeIII	GGCC	6 cut(s)	81, 108, 1210, 1412, 2248, 2629
HapII	CCGG	5 cut(s)	617, 692, 1100, 2074, 2212
HgaI	GACGC	1 cut(s)	1656
HhaI	GCGC	2 cut(s)	981, 2495
Hin1II	CATG	7 cut(s)	790, 859, 872, 1417, 1823, 2537, 2624
Hin6I	GCGC	2 cut(s)	979, 2493
HinP1I	GCGC	2 cut(s)	979, 2493
HincII	GTYRAC	1 cut(s)	430
HindII	GTYRAC	1 cut(s)	430
HindIII	AAGCTT	3 cut(s)	1838, 1850, 1982
HpaII	CCGG	5 cut(s)	617, 692, 1100, 2074, 2212
HphI	GGTGA	8 cut(s)	546, 607, 661, 2107, 2131, 2219, 2519, 2534
Hpy99I	CGWCG	1 cut(s)	37
HpyAV	CCTTC	9 cut(s)	472, 506, 830, 969, 1288, 1643, 1993, 2244, 2510
HpyCH4III	ACNGT	1 cut(s)	2044
HpyCH4IV	ACGT	5 cut(s)	426, 1026, 1462, 2023, 2486
HpyF10VI	GCNNNNNNNGC	5 cut(s)	529, 1451, 1889, 2144, 2626
HpyF3I	CTNAG	7 cut(s)	315, 713, 747, 1752, 1899, 2148, 2164
HpySE526I	ACGT	5 cut(s)	426, 1026, 1462, 2023, 2486
Hsp92II	CATG	7 cut(s)	790, 859, 872, 1417, 1823, 2537, 2624
HspAI	GCGC	2 cut(s)	979, 2493
Kpn2I	TCCGGA	1 cut(s)	691
KroI	GCCGGC	1 cut(s)	616
KroNI	GCCGGC	1 cut(s)	618
Kzo9I	GATC	9 cut(s)	59, 218, 637, 789, 1219, 1304, 2295, 2360, 2536
LguI	GCTCTTC	1 cut(s)	2319
LmnI	GCTCC	4 cut(s)	119, 880, 1398, 1648
Lsp1109I	GCAGC	2 cut(s)	507, 1515
LweI	GCATC	4 cut(s)	1225, 1732, 1738, 1785
MaeI	CTAG	4 cut(s)	1194, 1350, 1482, 2642
MaeII	ACGT	5 cut(s)	426, 1026, 1462, 2023, 2486
MaeIII	GTNAC	3 cut(s)	766, 1591, 1602
MalI	GATC	9 cut(s)	61, 220, 639, 791, 1221, 1306, 2297, 2362, 2538
MbiI	CCGCTC	1 cut(s)	2154
MboI	GATC	9 cut(s)	59, 218, 637, 789, 1219, 1304, 2295, 2360, 2536
MfeI	CAATTG	1 cut(s)	1136
MflI	RGATCY	2 cut(s)	59, 2295
MhlI	GDGCHC	1 cut(s)	2639
MlsI	TGGCCA	1 cut(s)	1412
MluNI	TGGCCA	1 cut(s)	1412
MlyI	GAGTC	2 cut(s)	41, 679
MmeI	TCCRAC	3 cut(s)	245, 306, 2323
Mox20I	TGGCCA	1 cut(s)	1412
Mph1103I	ATGCAT	2 cut(s)	870, 2058
MroI	TCCGGA	1 cut(s)	691
MroNI	GCCGGC	1 cut(s)	616
MroXI	GAANNNNTTC	2 cut(s)	41, 2003
MscI	TGGCCA	1 cut(s)	1412
MseI	TTAA	3 cut(s)	852, 1814, 1874
Msp20I	TGGCCA	1 cut(s)	1412
MspA1I	CMGCKG	2 cut(s)	1474, 1718
MspI	CCGG	5 cut(s)	617, 692, 1100, 2074, 2212
MspR9I	CCNGG	8 cut(s)	1115, 1212, 1251, 1263, 1397, 2075, 2213, 2546
MunI	CAATTG	1 cut(s)	1136
Mva1269I	GAATGC	3 cut(s)	522, 870, 2104
MvaI	CCWGG	6 cut(s)	1115, 1212, 1251, 1263, 1397, 2546
MvnI	CGCG	1 cut(s)	532
MwoI	GCNNNNNNNGC	5 cut(s)	529, 1451, 1889, 2144, 2626
NaeI	GCCGGC	1 cut(s)	618
NciI	CCSGG	2 cut(s)	2075, 2213
NcoI	CCATGG	1 cut(s)	1413
NdeII	GATC	9 cut(s)	59, 218, 637, 789, 1219, 1304, 2295, 2360, 2536
NgoMIV	GCCGGC	1 cut(s)	616
NlaIII	CATG	7 cut(s)	790, 859, 872, 1417, 1823, 2537, 2624
NlaIV	GGNNCC	1 cut(s)	115
NmeAIII	GCCGAG	1 cut(s)	524
NmuCI	GTSAC	1 cut(s)	1591
NruI	TCGCGA	1 cut(s)	532
NsiI	ATGCAT	2 cut(s)	870, 2058
NspI	RCATGY	2 cut(s)	1823, 2624
PaeI	GCATGC	2 cut(s)	1823, 2624
PagI	TCATGA	1 cut(s)	2533
PaqCI	CACCTGC	2 cut(s)	853, 2107
PciSI	GCTCTTC	1 cut(s)	2319
PcsI	WCGNNNNNNNCGW	1 cut(s)	2457
PctI	GAATGC	3 cut(s)	522, 870, 2104
PdiI	GCCGGC	1 cut(s)	618
PdmI	GAANNNNTTC	2 cut(s)	41, 2003
PfeI	GAWTC	8 cut(s)	284, 551, 695, 1197, 2254, 2426, 2456, 2575
PflMI	CCANNNNNTGG	1 cut(s)	1402
PkrI	GCNGC	2 cut(s)	522, 1530
PleI	GAGTC	2 cut(s)	41, 679
PpsI	GAGTC	2 cut(s)	41, 679
PpuMI	RGGWCCY	1 cut(s)	1190
Psp1406I	AACGTT	1 cut(s)	1026
Psp5II	RGGWCCY	1 cut(s)	1190
Psp6I	CCWGG	6 cut(s)	1113, 1210, 1249, 1261, 1395, 2544
PspGI	CCWGG	6 cut(s)	1113, 1210, 1249, 1261, 1395, 2544
PspN4I	GGNNCC	1 cut(s)	115
PspPI	GGNCC	4 cut(s)	80, 839, 1190, 2628
PspPPI	RGGWCCY	1 cut(s)	1190
PstNI	CAGNNNCTG	1 cut(s)	1402
PsuI	RGATCY	2 cut(s)	59, 2295
PvuII	CAGCTG	2 cut(s)	1474, 1718
RruI	TCGCGA	1 cut(s)	532
SapI	GCTCTTC	1 cut(s)	2319
SaqAI	TTAA	3 cut(s)	852, 1814, 1874
SatI	GCNGC	2 cut(s)	521, 1529
Sau3AI	GATC	9 cut(s)	59, 218, 637, 789, 1219, 1304, 2295, 2360, 2536
Sau96I	GGNCC	4 cut(s)	80, 839, 1190, 2628
ScaI	AGTACT	2 cut(s)	1108, 1287
SchI	GAGTC	2 cut(s)	41, 679
ScrFI	CCNGG	8 cut(s)	1115, 1212, 1251, 1263, 1397, 2075, 2213, 2546
SduI	GDGCHC	1 cut(s)	2639
SfaNI	GCATC	4 cut(s)	1225, 1732, 1738, 1785
SfcI	CTRYAG	2 cut(s)	1230, 1561
SinI	GGWCC	2 cut(s)	839, 1190
SmlI	CTYRAG	1 cut(s)	771
SmoI	CTYRAG	1 cut(s)	771
SpeI	ACTAGT	1 cut(s)	1481
SphI	GCATGC	2 cut(s)	1823, 2624
SsiI	CCGC	6 cut(s)	311, 375, 548, 677, 761, 2154
SspMI	CTAG	4 cut(s)	1194, 1350, 1482, 2642
StyD4I	CCNGG	8 cut(s)	1113, 1210, 1249, 1261, 1395, 2073, 2211, 2544
StyI	CCWWGG	2 cut(s)	1312, 1413
TaaI	ACNGT	1 cut(s)	2044
TaiI	ACGT	5 cut(s)	429, 1029, 1465, 2026, 2489
TaqI	TCGA	7 cut(s)	45, 68, 197, 217, 1381, 1537, 2359
TatI	WGTACW	5 cut(s)	383, 933, 1106, 1285, 2412
TfiI	GAWTC	8 cut(s)	284, 551, 695, 1197, 2254, 2426, 2456, 2575
Tru1I	TTAA	3 cut(s)	852, 1814, 1874
Tru9I	TTAA	3 cut(s)	852, 1814, 1874
TscAI	CASTG	9 cut(s)	678, 969, 1413, 1461, 1600, 2049, 2069, 2178, 2337
TseFI	GTSAC	1 cut(s)	1591
TseI	GCWGC	2 cut(s)	520, 1528
Tsp45I	GTSAC	1 cut(s)	1591
TspGWI	ACGGA	3 cut(s)	594, 1281, 2008
TspRI	CASTG	9 cut(s)	678, 969, 1413, 1461, 1600, 2049, 2069, 2178, 2337
Van91I	CCANNNNNTGG	1 cut(s)	1402
VpaK11BI	GGWCC	2 cut(s)	839, 1190
XceI	RCATGY	2 cut(s)	1823, 2624
XmiI	GTMKAC	2 cut(s)	1167, 2020
XmnI	GAANNNNTTC	2 cut(s)	41, 2003
XspI	CTAG	4 cut(s)	1194, 1350, 1482, 2642
ZrmI	AGTACT	2 cut(s)	1108, 1287
Zsp2I	ATGCAT	2 cut(s)	870, 2058

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.