Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0006556

Physical Location & Seq

Genomic Coordinates Forward (+)

54072990 .. 54078133

Gene Structure 5144 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG336200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2298 bp

ATGACTCTTGTGCCCGGTCGCCAACTTTACCCAACGAGCTTATTGGAGAGCTCCTTGTCAAAGTTCCATGGCACCCACATCCACTTGTTCAGGTATGGCTCCTCAATTCCTTACAAGAAGCAGAAATTCCATGCAACCCACTACTTTATCAGCTCTGGTGAGCAAAACCCACCCAGGAAATCAAGTTTGTTGACTTCTCAATACAAACCCACCAAGAATTTGTCTAGTTGTAGTTGGATTGATAGATGGAATGAATCCCGGAAACAAAATGGTCCCAGGGCGCCGCGGGCCGTGTTGGACTATCAGAGCAATGAAAGTGGGAATTTGAGTAGTTCAGGCAATGATGGGGGTAGTACAATGGACAAAATTGTGGAGAAATTAAAGAAATTTGGGTACATTGCGGCGGATAAGAATGAGGGTAAAGGTCAAGGGAGGGAGAGAGTGATCGAAAAAGGTTCTGTGGAGGATATATTTTATGTTGAGGAAGGAATGTTGCCGAATTCTAGAGGTGGGTTCTCGGCAGAGTCGCCATTAGGGGTGGAGAATGTGTTTGGAGATGATGGTGAGGTGAGGTTTCCATGGGAAAAGCCCAGGGAGAAAGAGAAGCAAGAAGACGGTTCGGTCAGGAGGAGGAGTAGGACTTCACTGGCAGAATTGACTCTTCCTGAGTCAGAGCTGAGGAGGCTAAGGAATATGACATTTCAGAAGAAGCACAAGACTAGGATTGGAGGTGCTGGTGTTACTCAAGCAGTAGTGGAGATGATTCATGAGAGATGGAAGACGTCCGAGATTGTGAGATTGAAAATCGAAGGTCCACCTGCACTCAACATGAAGAGAATGCATGAGATATTGGAGCGGAAAACTGGTGGTTTGGTGATCTGGAGGTCTGGCACATCGCTTTCTTTGTACAGAGGTGTGAGCTATGAAGTTCCTTCCGTGCAACTAAACAAGCGGATATTCAAGAGAAATGAAATTTCTTCTTCATCTTCACCAACTGTAGCTGATAAGTCAGTGGGGGAACCTTCTGTGCTTGCTTCTTATAGTATTGTAAAGACACCCTCACAAGTGTCAGAGAATACATCCCAGGAGAAGGAAGAGACAGAACAGTTGCCAGAAGTGAAGTATGAAGATGAAGTAGACCAACTTTTAGATAGCATAGGCCCTCGATTCAAGGATTGGCCAGGATGTGACCCATTACCTGTAGATGCAGACATGCTCCCAGGGATAGTTCCTGGTTTCCAACCGCCATTCAGAATACTTCCTTATGGAGTGCGATCAACTCTTGGTTTAAAGGAGGCAACATCTTTAAGAAGGCTTGCTAGGGTTCTTCCACCACATTTTGCTTTAGGTCGAAATAGGCAGCTGCAGGGCTTAGCAGTGGCTATGAGTAAACTATGGGAAAGAAGTTTGATTGCAAAGATTGCACTGAAACGTGGTGTTCAGTTGACTACTAGTGAGAGAATGGCTGAAGACATCAAGAAATTGACAGGGGGTGTGCTGCTATCTCGAAACAAGGACTTCTTGGTCTTCTATAGGGGAAAGAATTTTTTGTCTGCAGAAGTCACTGAAGCATTAGTGGAAAGGGAGAGATTGGCAAAATCCCTTCAAGATGAAGAGGAACAGGCCAGGTTGAGAGCATCAGCGATGGTTATGCCAAGTGTTGAACCAGCTCAACATTTTGGTACAGCTGGTACACTTGGGGAGACTCTGGATGCAGATGCTAAGTGGGGAAAGAGGTTGGATGTTCATCATAAGGAGAAGGTGACGCAAGAAGCAGGAATATTAAGGCATGCCAATCTGGTTAGAAAGCTTGAACAGAAGCTTGCCTTTGCTGAACGAAAGCTCATGAGAGCTGAACAAGCCTTATCTAAGGTAGAGGAGTCATTGAAACCATCGAAGCAGCAAGCAGACCCAGAAAGCATTACTGATGAGGAGAGGTTTATGTTTCGTAAGCTTGGTTTGAAGATGAAAGCTTTCCTACTACTTGGTAGACGTGGAGTTTTTGATGGTACAGTGGAGAACATGCATTTGCACTGGAAGTACCGTGAATTGGTCAAGATAATGGTGAATGCTAAAACTTTTGATCAAGTAAAAAAAATTGCACTAGCACTTGAAGCTGAAAGTGGAGGTGTCTTGGTTTCAGTAGACAAAGTCTCCAAAAAATATGCTATAATTGTGTACCGGGGAAATGACTATCAGCGACCTTCTACATTGAGACCAAAGAATCTTTTGACAAAAAGGAAAGCTTTGGCACGTTCTATTGAGCTTCAAAGGCAGGAGGTATCACTAGAAATTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000373 GO:0000375 GO:0000377 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008380 GO:0009507 GO:0009536 GO:0009791 GO:0009987 GO:0010154 GO:0010467 GO:0016070 GO:0022414 GO:0032501 GO:0032502 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0071704 GO:0090304 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CRS1_YhbY

Protein Analysis

765

Amino Acids

86.39

Weight (kDa)

9.66

Isoelectric Point (pI)

51.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CRS1_YhbY	PF01985	221 - 304	9.4e-20	CRS1 / YhbY (CRM) domain
CRS1_YhbY	PF01985	431 - 512	7.1e-14	CRS1 / YhbY (CRM) domain
CRS1_YhbY	PF01985	641 - 728	1e-18	CRS1 / YhbY (CRM) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0006556)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G23070
fragaria_vesca	FvH4_3g28120 FvH4_3g28120 FvH4_3g28120 FvH4_3g28120 FvH4_3g28120 FvH4_3g28120
malus_domestica	MD13G1206700.v1.1 MD16G1208000.v1.1
prunus_persica	Prupe.1G030300_v2.0.a1
pyrus_communis	pycom13g17910 pycom16g17530
rosa_chinensis	RchiOBHm_Chr5g0050811
rosa_laevigata	RLG00000034737 RLG00000034740
rosa_multiflora	Rmu_co8235889.1_g000001 Rmu_sc0004083.1_g000002 Rmu_sc0007394.1_g000006
rosa_roxburghii	Rroxscaffold_1G00029900 Rroxscaffold_1G00029910
rosa_rugosa	Rorug05G0264200.1
rosa_samantha	Rh5AG336200 Rh5BG345800 Rh5CG373500 Rh5DG358800
rosa_wichuraiana	Rw5G031710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	826
AasI	GACNNNNNNGTC	2 cut(s)	620, 1523
AatII	GACGTC	1 cut(s)	785
Acc36I	ACCTGC	1 cut(s)	826
AccB1I	GGYRCC	2 cut(s)	71, 280
AccBSI	CCGCTC	1 cut(s)	856
AccI	GTMKAC	3 cut(s)	1137, 1990, 2145
AccII	CGCG	1 cut(s)	286
AciI	CCGC	7 cut(s)	284, 286, 401, 404, 856, 952, 1244
AcoI	YGGCCR	1 cut(s)	1178
AcsI	RAATTY	8 cut(s)	125, 217, 322, 386, 499, 972, 1543, 2292
AcuI	CTGAAG	2 cut(s)	1488, 1587
AcyI	GRCGYC	2 cut(s)	281, 782
AfaI	GTAC	8 cut(s)	355, 395, 908, 1684, 1693, 2011, 2042, 2180
AfiI	CCNNNNNNNGG	2 cut(s)	1090, 2050
AhlI	ACTAGT	1 cut(s)	1451
AjiI	CACGTC	1 cut(s)	1994
AjnI	CCWGG	8 cut(s)	173, 275, 590, 1083, 1180, 1219, 1231, 1625
Alw21I	GWGCWC	1 cut(s)	53
Alw26I	GTCTC	4 cut(s)	1091, 1697, 2158, 2209
AoxI	GGCC	4 cut(s)	288, 1159, 1178, 1623
ApeKI	GCWGC	4 cut(s)	1360, 1363, 1498, 1900
ApoI	RAATTY	8 cut(s)	125, 217, 322, 386, 499, 972, 1543, 2292
Asp700I	GAANNNNTTC	1 cut(s)	1973
AspLEI	GCGC	1 cut(s)	283
AspS9I	GGNCC	4 cut(s)	272, 288, 812, 1160
AsuC2I	CCSGG	3 cut(s)	15, 259, 2183
AsuHPI	GGTGA	7 cut(s)	170, 575, 580, 886, 981, 1774, 2077
AvaII	GGWCC	2 cut(s)	272, 812
BaeGI	GKGCMC	1 cut(s)	15
BalI	TGGCCA	1 cut(s)	1180
BanI	GGYRCC	2 cut(s)	71, 280
BanII	GRGCYC	1 cut(s)	53
BbsI	GAAGAC	4 cut(s)	618, 785, 1476, 1519
Bbv12I	GWGCWC	1 cut(s)	53
BbvCI	CCTCAGC	1 cut(s)	677
BbvI	GCAGC	4 cut(s)	1350, 1372, 1485, 1912
BccI	CCATC	7 cut(s)	240, 338, 554, 768, 1639, 1900, 2000
BceAI	ACGGC	1 cut(s)	275
BcgI	CGANNNNNNTGC	2 cut(s)	1633, 1667
BciT130I	CCWGG	8 cut(s)	175, 277, 592, 1085, 1182, 1221, 1233, 1627
BclI	TGATCA	1 cut(s)	2083
BcnI	CCSGG	3 cut(s)	15, 259, 2183
BcoDI	GTCTC	4 cut(s)	1091, 1697, 2158, 2209
BcuI	ACTAGT	1 cut(s)	1451
BfaI	CTAG	7 cut(s)	225, 504, 720, 1320, 1452, 2105, 2288
BfmI	CTRYAG	5 cut(s)	996, 1200, 1364, 1531, 1554
BfoI	RGCGCY	1 cut(s)	284
BfuAI	ACCTGC	1 cut(s)	826
BisI	GCNGC	6 cut(s)	284, 402, 1361, 1364, 1499, 1901
BlpI	GCTNAGC	1 cut(s)	1372
BlsI	GCNGC	6 cut(s)	285, 403, 1362, 1365, 1500, 1902
Bme18I	GGWCC	2 cut(s)	272, 812
BmgBI	CACGTC	1 cut(s)	1994
BmgT120I	GGNCC	4 cut(s)	272, 288, 812, 1160
BmiI	GGNNCC	5 cut(s)	73, 100, 274, 282, 1020
BmsI	GCATC	4 cut(s)	1195, 1646, 1702, 1708
BpiI	GAAGAC	4 cut(s)	618, 785, 1476, 1519
BpmI	CTGGAG	1 cut(s)	901
Bpu10I	CCTNAGC	2 cut(s)	677, 686
Bpu1102I	GCTNAGC	1 cut(s)	1372
BpuEI	CTTGAG	1 cut(s)	729
BpuMI	CCSGG	3 cut(s)	15, 259, 2183
BsaBI	GATNNNNATC	1 cut(s)	1746
BsaHI	GRCGYC	2 cut(s)	281, 782
BsaI	GGTCTC	1 cut(s)	2209
BsaXI	ACNNNNNCTCC	6 cut(s)	533, 563, 619, 649, 2138, 2168
Bsc4I	CCNNNNNNNGG	2 cut(s)	1090, 2050
Bse1I	ACTGG	3 cut(s)	651, 868, 2039
Bse3DI	GCAATG	3 cut(s)	316, 346, 396
Bse8I	GATNNNNATC	1 cut(s)	1746
BseBI	CCWGG	8 cut(s)	175, 277, 592, 1085, 1182, 1221, 1233, 1627
BseGI	GGATG	5 cut(s)	78, 1079, 1190, 1717, 1747
BseJI	GATNNNNATC	1 cut(s)	1746
BseLI	CCNNNNNNNGG	2 cut(s)	1090, 2050
BseMI	GCAATG	3 cut(s)	316, 346, 396
BseMII	CTCAG	2 cut(s)	657, 668
BseNI	ACTGG	3 cut(s)	651, 868, 2039
BseRI	GAGGAG	6 cut(s)	91, 643, 646, 694, 1892, 1946
BseSI	GKGCMC	1 cut(s)	15
BseXI	GCAGC	4 cut(s)	1350, 1372, 1485, 1912
BsgI	GTGCAG	1 cut(s)	804
Bsh1236I	CGCG	1 cut(s)	286
Bsh1285I	CGRYCG	1 cut(s)	19
BshFI	GGCC	4 cut(s)	290, 1161, 1180, 1625
BshNI	GGYRCC	2 cut(s)	71, 280
BsiEI	CGRYCG	1 cut(s)	19
BsiHKAI	GWGCWC	1 cut(s)	53
BsiSI	CCGG	3 cut(s)	15, 259, 2182
BslFI	GGGAC	1 cut(s)	258
BslI	CCNNNNNNNGG	2 cut(s)	1090, 2050
BsmAI	GTCTC	4 cut(s)	1091, 1697, 2158, 2209
BsmFI	GGGAC	1 cut(s)	258
BsmI	GAATGC	2 cut(s)	843, 2074
BsnI	GGCC	4 cut(s)	290, 1161, 1180, 1625
Bso31I	GGTCTC	1 cut(s)	2209
Bsp1286I	GDGCHC	2 cut(s)	15, 53
Bsp1407I	TGTACA	1 cut(s)	906
Bsp143I	GATC	4 cut(s)	444, 876, 1274, 2083
Bsp1720I	GCTNAGC	1 cut(s)	1372
Bsp19I	CCATGG	2 cut(s)	67, 578
BspACI	CCGC	7 cut(s)	284, 286, 401, 404, 856, 952, 1244
BspANI	GGCC	4 cut(s)	290, 1161, 1180, 1625
BspCNI	CTCAG	2 cut(s)	658, 669
BspFNI	CGCG	1 cut(s)	286
BspHI	TCATGA	2 cut(s)	766, 1845
BspLI	GGNNCC	5 cut(s)	73, 100, 274, 282, 1020
BspMAI	CTGCAG	2 cut(s)	1368, 1558
BspMI	ACCTGC	1 cut(s)	826
BspT107I	GGYRCC	2 cut(s)	71, 280
BspTNI	GGTCTC	1 cut(s)	2209
BsrBI	CCGCTC	1 cut(s)	856
BsrDI	GCAATG	3 cut(s)	316, 346, 396
BsrGI	TGTACA	1 cut(s)	906
BsrI	ACTGG	3 cut(s)	651, 868, 2039
BssMI	GATC	4 cut(s)	444, 876, 1274, 2083
BssNI	GRCGYC	2 cut(s)	281, 782
BssT1I	CCWWGG	2 cut(s)	67, 578
Bst2UI	CCWGG	8 cut(s)	175, 277, 592, 1085, 1182, 1221, 1233, 1627
Bst4CI	ACNGT	5 cut(s)	617, 997, 1107, 2014, 2045
Bst6I	CTCTTC	4 cut(s)	666, 827, 1089, 1608
BstACI	GRCGYC	2 cut(s)	281, 782
BstAPI	GCANNNNNTGC	1 cut(s)	1421
BstAUI	TGTACA	1 cut(s)	906
BstC8I	GCNNGC	6 cut(s)	288, 1032, 1317, 1791, 1824, 1905
BstDEI	CTNAG	6 cut(s)	666, 677, 686, 1372, 1722, 1869
BstDSI	CCRYGG	3 cut(s)	67, 284, 578
BstF5I	GGATG	5 cut(s)	78, 1079, 1190, 1717, 1747
BstFNI	CGCG	1 cut(s)	286
BstH2I	RGCGCY	1 cut(s)	284
BstHHI	GCGC	1 cut(s)	283
BstKTI	GATC	4 cut(s)	447, 879, 1277, 2086
BstMAI	GTCTC	4 cut(s)	1091, 1697, 2158, 2209
BstMBI	GATC	4 cut(s)	444, 876, 1274, 2083
BstMCI	CGRYCG	1 cut(s)	19
BstMWI	GCNNNNNNNGC	6 cut(s)	287, 682, 1421, 1859, 2114, 2272
BstNI	CCWGG	8 cut(s)	175, 277, 592, 1085, 1182, 1221, 1233, 1627
BstNSI	RCATGY	3 cut(s)	1216, 1793, 2026
BstSFI	CTRYAG	5 cut(s)	996, 1200, 1364, 1531, 1554
BstSLI	GKGCMC	1 cut(s)	15
BstUI	CGCG	1 cut(s)	286
BstV1I	GCAGC	4 cut(s)	1350, 1372, 1485, 1912
BstV2I	GAAGAC	4 cut(s)	618, 785, 1476, 1519
BsuRI	GGCC	4 cut(s)	290, 1161, 1180, 1625
BtgI	CCRYGG	3 cut(s)	67, 284, 578
BtgZI	GCGATG	2 cut(s)	879, 1658
BtrI	CACGTC	1 cut(s)	1994
BtsCI	GGATG	5 cut(s)	78, 1079, 1190, 1717, 1747
BtsI	GCAGTG	1 cut(s)	1383
BtsIMutI	CAGTG	7 cut(s)	644, 1017, 1383, 1424, 1563, 2019, 2032
BveI	ACCTGC	1 cut(s)	826
Cac8I	GCNNGC	6 cut(s)	288, 1032, 1317, 1791, 1824, 1905
CciI	TCATGA	2 cut(s)	766, 1845
CfoI	GCGC	1 cut(s)	283
Cfr13I	GGNCC	4 cut(s)	272, 288, 812, 1160
Cfr42I	CCGCGG	1 cut(s)	287
CseI	GACGC	1 cut(s)	1774
Csp6I	GTAC	8 cut(s)	354, 394, 907, 1683, 1692, 2010, 2041, 2179
CspCI	CAANNNNNGTGG	2 cut(s)	298, 333
CviQI	GTAC	8 cut(s)	354, 394, 907, 1683, 1692, 2010, 2041, 2179
DdeI	CTNAG	6 cut(s)	666, 677, 686, 1372, 1722, 1869
DinI	GGCGCC	1 cut(s)	282
DpnI	GATC	4 cut(s)	446, 878, 1276, 2085
DpnII	GATC	4 cut(s)	444, 876, 1274, 2083
DraI	TTTAAA	1 cut(s)	1290
DrdI	GACNNNNNNGTC	2 cut(s)	620, 1523
DseDI	GACNNNNNNGTC	2 cut(s)	620, 1523
EaeI	YGGCCR	1 cut(s)	1178
Eam1104I	CTCTTC	4 cut(s)	666, 827, 1089, 1608
EarI	CTCTTC	4 cut(s)	666, 827, 1089, 1608
EciI	GGCGGA	1 cut(s)	419
Ecl136II	GAGCTC	1 cut(s)	51
Eco130I	CCWWGG	2 cut(s)	67, 578
Eco24I	GRGCYC	1 cut(s)	53
Eco31I	GGTCTC	1 cut(s)	2209
Eco47I	GGWCC	2 cut(s)	272, 812
Eco53kI	GAGCTC	1 cut(s)	51
Eco57I	CTGAAG	2 cut(s)	1488, 1587
EcoICRI	GAGCTC	1 cut(s)	51
EcoO109I	RGGNCCY	1 cut(s)	1160
EcoRI	GAATTC	1 cut(s)	499
EcoRII	CCWGG	8 cut(s)	173, 275, 590, 1083, 1180, 1219, 1231, 1625
EcoT14I	CCWWGG	2 cut(s)	67, 578
EcoT22I	ATGCAT	2 cut(s)	843, 2028
EcoT38I	GRGCYC	1 cut(s)	53
EgeI	GGCGCC	1 cut(s)	282
EheI	GGCGCC	1 cut(s)	282
ErhI	CCWWGG	2 cut(s)	67, 578
FalI	AAGNNNNNCTT	6 cut(s)	1505, 1537, 1811, 1843, 2230, 2262
FaqI	GGGAC	1 cut(s)	258
FauI	CCCGC	1 cut(s)	279
FbaI	TGATCA	1 cut(s)	2083
FblI	GTMKAC	3 cut(s)	1137, 1990, 2145
Fnu4HI	GCNGC	6 cut(s)	284, 402, 1361, 1364, 1499, 1901
FokI	GGATG	5 cut(s)	65, 1066, 1197, 1724, 1754
FriOI	GRGCYC	1 cut(s)	53
Fsp4HI	GCNGC	6 cut(s)	284, 402, 1361, 1364, 1499, 1901
FspBI	CTAG	7 cut(s)	225, 504, 720, 1320, 1452, 2105, 2288
GlaI	GCGC	1 cut(s)	282
GluI	GCNGC	6 cut(s)	284, 402, 1361, 1364, 1499, 1901
GsuI	CTGGAG	1 cut(s)	901
HaeII	RGCGCY	1 cut(s)	284
HaeIII	GGCC	4 cut(s)	290, 1161, 1180, 1625
HapII	CCGG	3 cut(s)	15, 259, 2182
HgaI	GACGC	1 cut(s)	1774
HhaI	GCGC	1 cut(s)	283
Hin1I	GRCGYC	2 cut(s)	281, 782
Hin6I	GCGC	1 cut(s)	281
HinP1I	GCGC	1 cut(s)	281
HincII	GTYRAC	2 cut(s)	192, 1446
HindII	GTYRAC	2 cut(s)	192, 1446
HindIII	AAGCTT	5 cut(s)	1808, 1820, 1952, 1971, 2244
HpaII	CCGG	3 cut(s)	15, 259, 2182
HphI	GGTGA	7 cut(s)	170, 575, 580, 886, 981, 1774, 2077
Hpy166II	GTNNAC	9 cut(s)	192, 815, 1138, 1391, 1446, 1694, 1991, 2146, 2179
Hpy188I	TCNGA	6 cut(s)	306, 673, 705, 787, 1072, 1253
Hpy8I	GTNNAC	9 cut(s)	192, 815, 1138, 1391, 1446, 1694, 1991, 2146, 2179
HpyAV	CCTTC	9 cut(s)	479, 803, 942, 1032, 1084, 1305, 1613, 1753, 2214
HpyCH4III	ACNGT	5 cut(s)	617, 997, 1107, 2014, 2045
HpyCH4IV	ACGT	4 cut(s)	782, 1432, 1993, 2254
HpyF10VI	GCNNNNNNNGC	6 cut(s)	287, 682, 1421, 1859, 2114, 2272
HpyF3I	CTNAG	6 cut(s)	666, 677, 686, 1372, 1722, 1869
HpySE526I	ACGT	4 cut(s)	782, 1432, 1993, 2254
Hsp92I	GRCGYC	2 cut(s)	281, 782
HspAI	GCGC	1 cut(s)	281
KasI	GGCGCC	1 cut(s)	280
Ksp22I	TGATCA	1 cut(s)	2083
KspI	CCGCGG	1 cut(s)	287
Kzo9I	GATC	4 cut(s)	444, 876, 1274, 2083
LmnI	GCTCC	4 cut(s)	56, 104, 853, 1221
Lsp1109I	GCAGC	4 cut(s)	1350, 1372, 1485, 1912
LweI	GCATC	4 cut(s)	1195, 1646, 1702, 1708
MaeI	CTAG	7 cut(s)	225, 504, 720, 1320, 1452, 2105, 2288
MaeII	ACGT	4 cut(s)	782, 1432, 1993, 2254
MaeIII	GTNAC	4 cut(s)	739, 1187, 1561, 1762
MalI	GATC	4 cut(s)	446, 878, 1276, 2085
MbiI	CCGCTC	1 cut(s)	856
MboI	GATC	4 cut(s)	444, 876, 1274, 2083
MhlI	GDGCHC	2 cut(s)	15, 53
MlsI	TGGCCA	1 cut(s)	1180
MluNI	TGGCCA	1 cut(s)	1180
Mly113I	GGCGCC	1 cut(s)	281
MlyI	GAGTC	5 cut(s)	533, 652, 677, 1699, 1889
MmeI	TCCRAC	4 cut(s)	215, 276, 1264, 1719
Mox20I	TGGCCA	1 cut(s)	1180
Mph1103I	ATGCAT	2 cut(s)	843, 2028
MroXI	GAANNNNTTC	1 cut(s)	1973
MscI	TGGCCA	1 cut(s)	1180
MseI	TTAA	5 cut(s)	380, 1289, 1307, 1784, 2296
Msp20I	TGGCCA	1 cut(s)	1180
MspA1I	CMGCKG	3 cut(s)	286, 1363, 1688
MspI	CCGG	3 cut(s)	15, 259, 2182
Mva1269I	GAATGC	2 cut(s)	843, 2074
MvaI	CCWGG	8 cut(s)	175, 277, 592, 1085, 1182, 1221, 1233, 1627
MvnI	CGCG	1 cut(s)	286
MwoI	GCNNNNNNNGC	6 cut(s)	287, 682, 1421, 1859, 2114, 2272
NarI	GGCGCC	1 cut(s)	281
NciI	CCSGG	3 cut(s)	15, 259, 2183
NcoI	CCATGG	2 cut(s)	67, 578
NdeII	GATC	4 cut(s)	444, 876, 1274, 2083
NlaIV	GGNNCC	5 cut(s)	73, 100, 274, 282, 1020
NmeAIII	GCCGAG	1 cut(s)	497
NmuCI	GTSAC	3 cut(s)	1187, 1561, 1762
NsiI	ATGCAT	2 cut(s)	843, 2028
NspI	RCATGY	3 cut(s)	1216, 1793, 2026
PaeI	GCATGC	1 cut(s)	1793
PagI	TCATGA	2 cut(s)	766, 1845
PaqCI	CACCTGC	1 cut(s)	826
PasI	CCCWGGG	3 cut(s)	276, 591, 1220
PctI	GAATGC	2 cut(s)	843, 2074
PdmI	GAANNNNTTC	1 cut(s)	1973
PfeI	GAWTC	4 cut(s)	254, 763, 1167, 2224
PflFI	GACNNNGTC	1 cut(s)	2150
PfoI	TCCNGGA	1 cut(s)	257
PkrI	GCNGC	6 cut(s)	285, 403, 1362, 1365, 1500, 1902
PleI	GAGTC	5 cut(s)	532, 652, 676, 1699, 1888
PluTI	GGCGCC	1 cut(s)	284
PpsI	GAGTC	5 cut(s)	532, 652, 676, 1699, 1888
Psp124BI	GAGCTC	1 cut(s)	53
Psp6I	CCWGG	8 cut(s)	173, 275, 590, 1083, 1180, 1219, 1231, 1625
PspGI	CCWGG	8 cut(s)	173, 275, 590, 1083, 1180, 1219, 1231, 1625
PspN4I	GGNNCC	5 cut(s)	73, 100, 274, 282, 1020
PspPI	GGNCC	4 cut(s)	272, 288, 812, 1160
PstI	CTGCAG	2 cut(s)	1368, 1558
PsyI	GACNNNGTC	1 cut(s)	2150
PvuII	CAGCTG	2 cut(s)	1363, 1688
RsaI	GTAC	8 cut(s)	355, 395, 908, 1684, 1693, 2011, 2042, 2180
RsaNI	GTAC	8 cut(s)	354, 394, 907, 1683, 1692, 2010, 2041, 2179
SacI	GAGCTC	1 cut(s)	53
SacII	CCGCGG	1 cut(s)	287
SaqAI	TTAA	5 cut(s)	380, 1289, 1307, 1784, 2296
SatI	GCNGC	6 cut(s)	284, 402, 1361, 1364, 1499, 1901
Sau3AI	GATC	4 cut(s)	444, 876, 1274, 2083
Sau96I	GGNCC	4 cut(s)	272, 288, 812, 1160
SchI	GAGTC	5 cut(s)	533, 652, 677, 1699, 1889
SduI	GDGCHC	2 cut(s)	15, 53
SfaNI	GCATC	4 cut(s)	1195, 1646, 1702, 1708
SfcI	CTRYAG	5 cut(s)	996, 1200, 1364, 1531, 1554
SfoI	GGCGCC	1 cut(s)	282
Sfr303I	CCGCGG	1 cut(s)	287
SgrBI	CCGCGG	1 cut(s)	287
SinI	GGWCC	2 cut(s)	272, 812
SmlI	CTYRAG	1 cut(s)	744
SmoI	CTYRAG	1 cut(s)	744
SpeI	ACTAGT	1 cut(s)	1451
SphI	GCATGC	1 cut(s)	1793
SsiI	CCGC	7 cut(s)	284, 286, 401, 404, 856, 952, 1244
SspDI	GGCGCC	1 cut(s)	280
SspI	AATATT	1 cut(s)	1782
SspMI	CTAG	7 cut(s)	225, 504, 720, 1320, 1452, 2105, 2288
SstI	GAGCTC	1 cut(s)	53
StyI	CCWWGG	2 cut(s)	67, 578
TaaI	ACNGT	5 cut(s)	617, 997, 1107, 2014, 2045
TaiI	ACGT	4 cut(s)	785, 1435, 1996, 2257
TaqI	TCGA	6 cut(s)	447, 807, 1165, 1351, 1507, 1895
TaqII	GACCGA	1 cut(s)	610
TatI	WGTACW	2 cut(s)	353, 906
TauI	GCSGC	2 cut(s)	286, 404
TfiI	GAWTC	4 cut(s)	254, 763, 1167, 2224
Tru1I	TTAA	5 cut(s)	380, 1289, 1307, 1784, 2296
Tru9I	TTAA	5 cut(s)	380, 1289, 1307, 1784, 2296
TscAI	CASTG	7 cut(s)	651, 1017, 1383, 1431, 1570, 2019, 2039
TseFI	GTSAC	3 cut(s)	1187, 1561, 1762
TseI	GCWGC	4 cut(s)	1360, 1363, 1498, 1900
Tsp45I	GTSAC	3 cut(s)	1187, 1561, 1762
TspGWI	ACGGA	1 cut(s)	925
TspRI	CASTG	7 cut(s)	651, 1017, 1383, 1431, 1570, 2019, 2039
Tth111I	GACNNNGTC	1 cut(s)	2150
VpaK11BI	GGWCC	2 cut(s)	272, 812
XapI	RAATTY	8 cut(s)	125, 217, 322, 386, 499, 972, 1543, 2292
XbaI	TCTAGA	1 cut(s)	503
XceI	RCATGY	3 cut(s)	1216, 1793, 2026
XmiI	GTMKAC	3 cut(s)	1137, 1990, 2145
XmnI	GAANNNNTTC	1 cut(s)	1973
XspI	CTAG	7 cut(s)	225, 504, 720, 1320, 1452, 2105, 2288
ZraI	GACGTC	1 cut(s)	783
Zsp2I	ATGCAT	2 cut(s)	843, 2028

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.