Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0006556

Physical Location & Seq

Genomic Coordinates Forward (+)

48108899 .. 48114408

Gene Structure 5510 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG373500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2565 bp

ATGACTCTTGTGCCCAGTCGCCAACTTTACCCAACGAGCTCCTTGTCAAAGTTCCATGGCACCCACATCCACTTGTTCAGGTATGGCTCCTCAATTCCTTACAAGAAGCAGAAATTCCATGCAACCCACTACTTTATCAGCTCTGGTGAGCAAAACCCACCCAGGAAATCAAGTTTGTTGATTTCTCAATACAAACCCACCAAGAATTTATCTAGTTGTAGTTGGATTGATAGATGGAATGAATCCCGGAAACAAAATGGGCCCAGGGCGCCGCGGGCCGTGTTGGACTATCAGAGCAATGAAAGTGGGAATTTGAGTAGTTCAGGCAATGATGGGGGTAGTACAATGGACAAAATTGTGGAGAAATTAAAGAAATTTGGGTACATTGCGGCGGATAAGAATGAGGGTGAAGGTCAAGGGAGGGAGAGAGTGATCGAAAAAGGTTCTGTGGAGGATATATTTTATGTTGAGGAAGGAATGTTGCCGAATTCTAGAGGTGGGTTCTCGGCGGAATCGCCATTAGGGGTGGAGAATGTGTTTGGAGATGATGATGGTGGTGAGGTGAGGTTTCCATGGGAAAAGCCCAGGGAGAAAGAGAAGCAAGAAGACGGTTCGGTCAGGAGGAGGAGTAGGACTTCATTGGCAGAATTGACTCTTCCTGAGTCAGAGCTGAGGAGGCTAAGGAATATGACATTTCAGAAGAAGCACAAGACTAGGATTGGAGCTGCTGGTGTTACTCAAGCAGTAGTGGAGATGATTCATGAGAGATGGAAGACGTCCGAGATTGTGAGATTGAAAATCGAAGGTCCACCTGCACTCAACATGAAGAGAATGCATGAGATATTGGAGCGGAAAACTGGTGGTTTGGTGATCTGGAGGTCTGGCACATCGCTTTCTTTGTACAGAGGTGTGAGCTATGAAGTTCCTTCCTTGCAACTAAGCAAGCGGATATTCAAGAGAAATGAAATTTCTTCTTCATCTTCACCAACTGTAGCTGATAAGTCAGTGGGGGAACCTTCTGTGCTTGCTTCTTATAGTATTGTAAAGACACCCTCAGAAGTGTCAGAGAATACATCCCAGGAGAAGGAAGAGACAGAACAGTTGCCAGAAGTGAAGTATGAAGATGAAGTAGACCAACTTTTAGATAGCATAGGCCCTCGATTCAAGGATTGGCCAGGATGTGACCCATTACCTGTAGATGCAGACATGCTCCCAGGGATAGTTCCTGGTTTCCAACCGCCATTCAGAATACTTCCTTATGGAGTGCGATCAACTCTTGGTTTAAAGGAGGCAACATCTTTAAGAAGGCTTGCTAGGGTTCTTCCACCACATTTTGCTTTAGGTCGAAATAGGCAGCTGCAGGGCTTAGCAGTGGCTATGAGTAAACTATGGGAAAGAAGTTTGATTGCAAAGATTGCACTGAAACGTGGTGTTCAGTTGACTACTAGTGAGAGAATGGCTGAAGACATCAAGAAATTGACAGGGGGTGTGCTGCTATCTCGAAACAAGGACTTCTTGGTCTTCTATAGGGGAAAGAATTTTTTGTCTGCAGAAGTCACTGAAGCATTAGTGGAAAGGGAGAGATTGGCAAAATCCCTTCAAGATGAAGAGGAACAGGCCAGGTTGAGAGCATCAGCGATGGTTATGCCAAGTGTTGAACCAGCTCAACATTTTGGTACAGCTGGTACACTTGGGGAGACTCTGGATGCAGATGCTAAGTGGGGAAAGAGGTTGGATGTTCATCATAAGGAGAAGGTGACGCAAGAAGCAGGAATATTGAGGCATGCCAATCTGGTTAGAAAGCTTGAACAGAAGCTTGCCTTTGCTGAACGAAAGCTCATGAGAGCTGAACAAGCCTTATCTAAGGTAGAGGAGTCATTGAAACCATCGAAGCAGCAAGCAGACCCAGAAAGCATTACTGATGAGGAGAGGTTTATGTTTCGTAAGCTTGGTTTGAAGATGAAAGCTTTCCTACTACTTGGTAGACGTGGAGTTTTTGATGGTACAGTGGAGAACATGCATTTGCACTGGAAGTACCGTGAATTGGTCAAGATAATGGTGAATGCTAAAACTTTTGATCAAGTAAAAAAAATTGCATTAGCACTTGAAGCTGAAAGTGGAGGTGTCTTGGTTTCAGTAGACAAAGTCTCCAAAAAATATGCTATAATTGTGTACCGGGGAAATGACTATCAGCGACCTTCTATGTTGAGACCAAAGAATCTTTTGACCAAAAGGAAAGCTTTGGCACGTTCTATTGAGCTTCAAAGGCAGGAGGCTCTTCTGAAACATATTGCAGCTGTGCAGAGTAGGGTGGATAGACTGAGATCTGAAATTGAACAAATGGATACTGTGAAACATCATGGAGATGAAGCATTGTACAACAAATTAGATTCTTCTTATCCTACTGATGATGAGGATACAGAGGAAGAAGGCGACGATGCTTATCTTGAAACATATAACAGCGAGAATGATGGTGAAGAAGAAAGCAGTTTCTCAGTTCACAATACTTGCACGGAAACCAATTTTCCTTATCATCTCCAGAATGAGGACTCTCTAGCAGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000373 GO:0000375 GO:0000377 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008380 GO:0009507 GO:0009536 GO:0009791 GO:0009987 GO:0010154 GO:0010467 GO:0016070 GO:0022414 GO:0032501 GO:0032502 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0071704 GO:0090304 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CRS1_YhbY

Protein Analysis

854

Amino Acids

96.62

Weight (kDa)

8.76

Isoelectric Point (pI)

54.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CRS1_YhbY	PF01985	219 - 302	9.6e-20	CRS1 / YhbY (CRM) domain
CRS1_YhbY	PF01985	429 - 510	8.3e-14	CRS1 / YhbY (CRM) domain
CRS1_YhbY	PF01985	639 - 726	1.2e-18	CRS1 / YhbY (CRM) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006556)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G23070
fragaria_vesca	FvH4_3g28120 FvH4_3g28120 FvH4_3g28120 FvH4_3g28120 FvH4_3g28120 FvH4_3g28120
malus_domestica	MD13G1206700.v1.1 MD16G1208000.v1.1
prunus_persica	Prupe.1G030300_v2.0.a1
pyrus_communis	pycom13g17910 pycom16g17530
rosa_chinensis	RchiOBHm_Chr5g0050811
rosa_laevigata	RLG00000034737 RLG00000034740
rosa_multiflora	Rmu_co8235889.1_g000001 Rmu_sc0004083.1_g000002 Rmu_sc0007394.1_g000006
rosa_roxburghii	Rroxscaffold_1G00029900 Rroxscaffold_1G00029910
rosa_rugosa	Rorug05G0264200.1
rosa_samantha	Rh5AG336200 Rh5BG345800 Rh5CG373500 Rh5DG358800
rosa_wichuraiana	Rw5G031710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	820
AasI	GACNNNNNNGTC	2 cut(s)	614, 1517
AatII	GACGTC	1 cut(s)	779
Acc36I	ACCTGC	1 cut(s)	820
AccB1I	GGYRCC	2 cut(s)	59, 268
AccBSI	CCGCTC	1 cut(s)	850
AccI	GTMKAC	3 cut(s)	1131, 1984, 2139
AccII	CGCG	1 cut(s)	274
AciI	CCGC	8 cut(s)	272, 274, 389, 392, 509, 850, 946, 1238
AcoI	YGGCCR	1 cut(s)	1172
AcsI	RAATTY	7 cut(s)	113, 205, 310, 374, 487, 966, 1537
AcuI	CTGAAG	2 cut(s)	1482, 1581
AcyI	GRCGYC	2 cut(s)	269, 776
AfaI	GTAC	9 cut(s)	343, 383, 902, 1678, 1687, 2005, 2036, 2174, 2378
AfiI	CCNNNNNNNGG	3 cut(s)	1084, 2044, 2545
AhlI	ACTAGT	1 cut(s)	1445
AjiI	CACGTC	1 cut(s)	1988
AjnI	CCWGG	8 cut(s)	161, 263, 584, 1077, 1174, 1213, 1225, 1619
Alw21I	GWGCWC	1 cut(s)	41
Alw26I	GTCTC	4 cut(s)	1085, 1691, 2152, 2203
AoxI	GGCC	5 cut(s)	260, 276, 1153, 1172, 1617
ApaI	GGGCCC	1 cut(s)	264
ApeKI	GCWGC	6 cut(s)	725, 1354, 1357, 1492, 1894, 2294
ApoI	RAATTY	7 cut(s)	113, 205, 310, 374, 487, 966, 1537
Asp700I	GAANNNNTTC	1 cut(s)	1967
AspLEI	GCGC	1 cut(s)	271
AspS9I	GGNCC	5 cut(s)	260, 261, 276, 806, 1154
AsuC2I	CCSGG	2 cut(s)	247, 2177
AsuHPI	GGTGA	9 cut(s)	158, 419, 569, 574, 880, 975, 1768, 2071, 2486
AvaII	GGWCC	1 cut(s)	806
BaeGI	GKGCMC	2 cut(s)	15, 264
BalI	TGGCCA	1 cut(s)	1174
BanI	GGYRCC	2 cut(s)	59, 268
BanII	GRGCYC	2 cut(s)	41, 264
BbsI	GAAGAC	4 cut(s)	612, 779, 1470, 1513
Bbv12I	GWGCWC	1 cut(s)	41
BbvCI	CCTCAGC	1 cut(s)	671
BbvI	GCAGC	6 cut(s)	712, 1344, 1366, 1479, 1906, 2306
BccI	CCATC	8 cut(s)	228, 326, 545, 762, 1633, 1894, 1994, 2465
BceAI	ACGGC	1 cut(s)	263
BcgI	CGANNNNNNTGC	2 cut(s)	1627, 1661
BciT130I	CCWGG	8 cut(s)	163, 265, 586, 1079, 1176, 1215, 1227, 1621
BciVI	GTATCC	2 cut(s)	2338, 2410
BclI	TGATCA	1 cut(s)	2077
BcnI	CCSGG	2 cut(s)	247, 2177
BcoDI	GTCTC	4 cut(s)	1085, 1691, 2152, 2203
BcuI	ACTAGT	1 cut(s)	1445
BfaI	CTAG	6 cut(s)	213, 492, 714, 1314, 1446, 2555
BfmI	CTRYAG	5 cut(s)	990, 1194, 1358, 1525, 1548
BfoI	RGCGCY	1 cut(s)	272
BfuAI	ACCTGC	1 cut(s)	820
BfuI	GTATCC	2 cut(s)	2338, 2410
BglII	AGATCT	1 cut(s)	2324
BisI	GCNGC	8 cut(s)	272, 390, 726, 1355, 1358, 1493, 1895, 2295
BlpI	GCTNAGC	1 cut(s)	1366
BlsI	GCNGC	8 cut(s)	273, 391, 727, 1356, 1359, 1494, 1896, 2296
Bme18I	GGWCC	1 cut(s)	806
BmgBI	CACGTC	1 cut(s)	1988
BmgT120I	GGNCC	5 cut(s)	260, 261, 276, 806, 1154
BmiI	GGNNCC	5 cut(s)	61, 88, 262, 270, 1014
BmrI	ACTGGG	1 cut(s)	9
BmsI	GCATC	5 cut(s)	1189, 1640, 1696, 1702, 2428
BmuI	ACTGGG	1 cut(s)	9
BpiI	GAAGAC	4 cut(s)	612, 779, 1470, 1513
BpmI	CTGGAG	2 cut(s)	895, 2522
Bpu10I	CCTNAGC	2 cut(s)	671, 680
Bpu1102I	GCTNAGC	1 cut(s)	1366
BpuEI	CTTGAG	1 cut(s)	723
BpuMI	CCSGG	2 cut(s)	247, 2177
BsaBI	GATNNNNATC	2 cut(s)	1740, 2442
BsaHI	GRCGYC	2 cut(s)	269, 776
BsaI	GGTCTC	1 cut(s)	2203
BsaXI	ACNNNNNCTCC	6 cut(s)	521, 551, 613, 643, 2132, 2162
Bsc4I	CCNNNNNNNGG	3 cut(s)	1084, 2044, 2545
Bse1I	ACTGG	3 cut(s)	15, 862, 2033
Bse3DI	GCAATG	3 cut(s)	304, 334, 384
Bse8I	GATNNNNATC	2 cut(s)	1740, 2442
BseBI	CCWGG	8 cut(s)	163, 265, 586, 1079, 1176, 1215, 1227, 1621
BseGI	GGATG	5 cut(s)	66, 1073, 1184, 1711, 1741
BseJI	GATNNNNATC	2 cut(s)	1740, 2442
BseLI	CCNNNNNNNGG	3 cut(s)	1084, 2044, 2545
BseMI	GCAATG	3 cut(s)	304, 334, 384
BseMII	CTCAG	5 cut(s)	651, 662, 1068, 2312, 2508
BseNI	ACTGG	3 cut(s)	15, 862, 2033
BseRI	GAGGAG	6 cut(s)	79, 637, 640, 688, 1886, 1940
BseSI	GKGCMC	2 cut(s)	15, 264
BseXI	GCAGC	6 cut(s)	712, 1344, 1366, 1479, 1906, 2306
BsgI	GTGCAG	2 cut(s)	798, 2321
Bsh1236I	CGCG	1 cut(s)	274
BshFI	GGCC	5 cut(s)	262, 278, 1155, 1174, 1619
BshNI	GGYRCC	2 cut(s)	59, 268
BsiHKAI	GWGCWC	1 cut(s)	41
BsiSI	CCGG	2 cut(s)	247, 2176
BslI	CCNNNNNNNGG	3 cut(s)	1084, 2044, 2545
BsmAI	GTCTC	4 cut(s)	1085, 1691, 2152, 2203
BsmI	GAATGC	2 cut(s)	837, 2068
BsnI	GGCC	5 cut(s)	262, 278, 1155, 1174, 1619
Bso31I	GGTCTC	1 cut(s)	2203
Bsp120I	GGGCCC	1 cut(s)	260
Bsp1286I	GDGCHC	3 cut(s)	15, 41, 264
Bsp1407I	TGTACA	2 cut(s)	900, 2376
Bsp143I	GATC	5 cut(s)	432, 870, 1268, 2077, 2324
Bsp1720I	GCTNAGC	1 cut(s)	1366
Bsp19I	CCATGG	2 cut(s)	55, 572
BspACI	CCGC	8 cut(s)	272, 274, 389, 392, 509, 850, 946, 1238
BspANI	GGCC	5 cut(s)	262, 278, 1155, 1174, 1619
BspCNI	CTCAG	5 cut(s)	652, 663, 1067, 2313, 2507
BspFNI	CGCG	1 cut(s)	274
BspHI	TCATGA	2 cut(s)	760, 1839
BspLI	GGNNCC	5 cut(s)	61, 88, 262, 270, 1014
BspMAI	CTGCAG	2 cut(s)	1362, 1552
BspMI	ACCTGC	1 cut(s)	820
BspQI	GCTCTTC	1 cut(s)	2283
BspT107I	GGYRCC	2 cut(s)	59, 268
BspTNI	GGTCTC	1 cut(s)	2203
BsrBI	CCGCTC	1 cut(s)	850
BsrDI	GCAATG	3 cut(s)	304, 334, 384
BsrGI	TGTACA	2 cut(s)	900, 2376
BsrI	ACTGG	3 cut(s)	15, 862, 2033
BssMI	GATC	5 cut(s)	432, 870, 1268, 2077, 2324
BssNI	GRCGYC	2 cut(s)	269, 776
BssT1I	CCWWGG	2 cut(s)	55, 572
Bst2UI	CCWGG	8 cut(s)	163, 265, 586, 1079, 1176, 1215, 1227, 1621
Bst4CI	ACNGT	6 cut(s)	611, 991, 1101, 2008, 2039, 2350
Bst6I	CTCTTC	5 cut(s)	660, 821, 1083, 1602, 2283
BstACI	GRCGYC	2 cut(s)	269, 776
BstAPI	GCANNNNNTGC	1 cut(s)	1415
BstAUI	TGTACA	2 cut(s)	900, 2376
BstC8I	GCNNGC	7 cut(s)	276, 944, 1026, 1311, 1785, 1818, 1899
BstDSI	CCRYGG	3 cut(s)	55, 272, 572
BstF5I	GGATG	5 cut(s)	66, 1073, 1184, 1711, 1741
BstFNI	CGCG	1 cut(s)	274
BstH2I	RGCGCY	1 cut(s)	272
BstHHI	GCGC	1 cut(s)	271
BstKTI	GATC	5 cut(s)	435, 873, 1271, 2080, 2327
BstMAI	GTCTC	4 cut(s)	1085, 1691, 2152, 2203
BstMBI	GATC	5 cut(s)	432, 870, 1268, 2077, 2324
BstMWI	GCNNNNNNNGC	7 cut(s)	268, 275, 676, 1415, 1853, 2108, 2266
BstNI	CCWGG	8 cut(s)	163, 265, 586, 1079, 1176, 1215, 1227, 1621
BstNSI	RCATGY	3 cut(s)	1210, 1787, 2020
BstSFI	CTRYAG	5 cut(s)	990, 1194, 1358, 1525, 1548
BstSLI	GKGCMC	2 cut(s)	15, 264
BstUI	CGCG	1 cut(s)	274
BstV1I	GCAGC	6 cut(s)	712, 1344, 1366, 1479, 1906, 2306
BstV2I	GAAGAC	4 cut(s)	612, 779, 1470, 1513
BstX2I	RGATCY	1 cut(s)	2324
BstYI	RGATCY	1 cut(s)	2324
BsuI	GTATCC	2 cut(s)	2338, 2410
BsuRI	GGCC	5 cut(s)	262, 278, 1155, 1174, 1619
BtgI	CCRYGG	3 cut(s)	55, 272, 572
BtgZI	GCGATG	2 cut(s)	873, 1652
BtrI	CACGTC	1 cut(s)	1988
BtsCI	GGATG	5 cut(s)	66, 1073, 1184, 1711, 1741
BtsI	GCAGTG	1 cut(s)	1377
BtsIMutI	CAGTG	6 cut(s)	1011, 1377, 1418, 1557, 2013, 2026
BveI	ACCTGC	1 cut(s)	820
Cac8I	GCNNGC	7 cut(s)	276, 944, 1026, 1311, 1785, 1818, 1899
CciI	TCATGA	2 cut(s)	760, 1839
CfoI	GCGC	1 cut(s)	271
Cfr13I	GGNCC	5 cut(s)	260, 261, 276, 806, 1154
Cfr42I	CCGCGG	1 cut(s)	275
CseI	GACGC	1 cut(s)	1768
Csp6I	GTAC	9 cut(s)	342, 382, 901, 1677, 1686, 2004, 2035, 2173, 2377
CspCI	CAANNNNNGTGG	2 cut(s)	286, 321
CviQI	GTAC	9 cut(s)	342, 382, 901, 1677, 1686, 2004, 2035, 2173, 2377
DinI	GGCGCC	1 cut(s)	270
DpnI	GATC	5 cut(s)	434, 872, 1270, 2079, 2326
DpnII	GATC	5 cut(s)	432, 870, 1268, 2077, 2324
DraI	TTTAAA	1 cut(s)	1284
DrdI	GACNNNNNNGTC	2 cut(s)	614, 1517
DseDI	GACNNNNNNGTC	2 cut(s)	614, 1517
EaeI	YGGCCR	1 cut(s)	1172
Eam1104I	CTCTTC	5 cut(s)	660, 821, 1083, 1602, 2283
EarI	CTCTTC	5 cut(s)	660, 821, 1083, 1602, 2283
EciI	GGCGGA	2 cut(s)	407, 524
Ecl136II	GAGCTC	1 cut(s)	39
Eco130I	CCWWGG	2 cut(s)	55, 572
Eco24I	GRGCYC	2 cut(s)	41, 264
Eco31I	GGTCTC	1 cut(s)	2203
Eco47I	GGWCC	1 cut(s)	806
Eco53kI	GAGCTC	1 cut(s)	39
Eco57I	CTGAAG	2 cut(s)	1482, 1581
EcoICRI	GAGCTC	1 cut(s)	39
EcoO109I	RGGNCCY	1 cut(s)	1154
EcoRI	GAATTC	1 cut(s)	487
EcoRII	CCWGG	8 cut(s)	161, 263, 584, 1077, 1174, 1213, 1225, 1619
EcoT14I	CCWWGG	2 cut(s)	55, 572
EcoT22I	ATGCAT	2 cut(s)	837, 2022
EcoT38I	GRGCYC	2 cut(s)	41, 264
EgeI	GGCGCC	1 cut(s)	270
EheI	GGCGCC	1 cut(s)	270
ErhI	CCWWGG	2 cut(s)	55, 572
FalI	AAGNNNNNCTT	6 cut(s)	1499, 1531, 1805, 1837, 2224, 2256
FauI	CCCGC	1 cut(s)	267
FbaI	TGATCA	1 cut(s)	2077
FblI	GTMKAC	3 cut(s)	1131, 1984, 2139
Fnu4HI	GCNGC	8 cut(s)	272, 390, 726, 1355, 1358, 1493, 1895, 2295
FokI	GGATG	5 cut(s)	53, 1060, 1191, 1718, 1748
FriOI	GRGCYC	2 cut(s)	41, 264
Fsp4HI	GCNGC	8 cut(s)	272, 390, 726, 1355, 1358, 1493, 1895, 2295
FspBI	CTAG	6 cut(s)	213, 492, 714, 1314, 1446, 2555
GlaI	GCGC	1 cut(s)	270
GluI	GCNGC	8 cut(s)	272, 390, 726, 1355, 1358, 1493, 1895, 2295
GsuI	CTGGAG	2 cut(s)	895, 2522
HaeII	RGCGCY	1 cut(s)	272
HaeIII	GGCC	5 cut(s)	262, 278, 1155, 1174, 1619
HapII	CCGG	2 cut(s)	247, 2176
HgaI	GACGC	1 cut(s)	1768
HhaI	GCGC	1 cut(s)	271
Hin1I	GRCGYC	2 cut(s)	269, 776
Hin6I	GCGC	1 cut(s)	269
HinP1I	GCGC	1 cut(s)	269
HincII	GTYRAC	1 cut(s)	1440
HindII	GTYRAC	1 cut(s)	1440
HindIII	AAGCTT	5 cut(s)	1802, 1814, 1946, 1965, 2238
HpaII	CCGG	2 cut(s)	247, 2176
HphI	GGTGA	9 cut(s)	158, 419, 569, 574, 880, 975, 1768, 2071, 2486
Hpy166II	GTNNAC	9 cut(s)	809, 1132, 1385, 1440, 1688, 1985, 2140, 2173, 2500
Hpy188I	TCNGA	9 cut(s)	294, 667, 699, 781, 1057, 1066, 1247, 2283, 2329
Hpy8I	GTNNAC	9 cut(s)	809, 1132, 1385, 1440, 1688, 1985, 2140, 2173, 2500
Hpy99I	CGWCG	1 cut(s)	2438
HpyCH4III	ACNGT	6 cut(s)	611, 991, 1101, 2008, 2039, 2350
HpyCH4IV	ACGT	4 cut(s)	776, 1426, 1987, 2248
HpyF10VI	GCNNNNNNNGC	7 cut(s)	268, 275, 676, 1415, 1853, 2108, 2266
HpySE526I	ACGT	4 cut(s)	776, 1426, 1987, 2248
Hsp92I	GRCGYC	2 cut(s)	269, 776
HspAI	GCGC	1 cut(s)	269
KasI	GGCGCC	1 cut(s)	268
Ksp22I	TGATCA	1 cut(s)	2077
KspI	CCGCGG	1 cut(s)	275
Kzo9I	GATC	5 cut(s)	432, 870, 1268, 2077, 2324
LguI	GCTCTTC	1 cut(s)	2283
LmnI	GCTCC	5 cut(s)	44, 92, 722, 847, 1215
Lsp1109I	GCAGC	6 cut(s)	712, 1344, 1366, 1479, 1906, 2306
LweI	GCATC	5 cut(s)	1189, 1640, 1696, 1702, 2428
MaeI	CTAG	6 cut(s)	213, 492, 714, 1314, 1446, 2555
MaeII	ACGT	4 cut(s)	776, 1426, 1987, 2248
MaeIII	GTNAC	4 cut(s)	733, 1181, 1555, 1756
MalI	GATC	5 cut(s)	434, 872, 1270, 2079, 2326
MbiI	CCGCTC	1 cut(s)	850
MboI	GATC	5 cut(s)	432, 870, 1268, 2077, 2324
MflI	RGATCY	1 cut(s)	2324
MhlI	GDGCHC	3 cut(s)	15, 41, 264
MlsI	TGGCCA	1 cut(s)	1174
MluNI	TGGCCA	1 cut(s)	1174
Mly113I	GGCGCC	1 cut(s)	269
MlyI	GAGTC	5 cut(s)	646, 671, 1693, 1883, 2543
MmeI	TCCRAC	4 cut(s)	203, 264, 1258, 1713
Mox20I	TGGCCA	1 cut(s)	1174
Mph1103I	ATGCAT	2 cut(s)	837, 2022
MroXI	GAANNNNTTC	1 cut(s)	1967
MscI	TGGCCA	1 cut(s)	1174
MseI	TTAA	3 cut(s)	368, 1283, 1301
MslI	CAYNNNNRTG	1 cut(s)	2364
Msp20I	TGGCCA	1 cut(s)	1174
MspA1I	CMGCKG	4 cut(s)	274, 1357, 1682, 2297
MspI	CCGG	2 cut(s)	247, 2176
Mva1269I	GAATGC	2 cut(s)	837, 2068
MvaI	CCWGG	8 cut(s)	163, 265, 586, 1079, 1176, 1215, 1227, 1621
MvnI	CGCG	1 cut(s)	274
MwoI	GCNNNNNNNGC	7 cut(s)	268, 275, 676, 1415, 1853, 2108, 2266
NarI	GGCGCC	1 cut(s)	269
NciI	CCSGG	2 cut(s)	247, 2177
NcoI	CCATGG	2 cut(s)	55, 572
NdeII	GATC	5 cut(s)	432, 870, 1268, 2077, 2324
NlaIV	GGNNCC	5 cut(s)	61, 88, 262, 270, 1014
NmeAIII	GCCGAG	1 cut(s)	485
NmuCI	GTSAC	3 cut(s)	1181, 1555, 1756
NsiI	ATGCAT	2 cut(s)	837, 2022
NspI	RCATGY	3 cut(s)	1210, 1787, 2020
PaeI	GCATGC	1 cut(s)	1787
PagI	TCATGA	2 cut(s)	760, 1839
PaqCI	CACCTGC	1 cut(s)	820
PasI	CCCWGGG	3 cut(s)	264, 585, 1214
PciSI	GCTCTTC	1 cut(s)	2283
PctI	GAATGC	2 cut(s)	837, 2068
PdmI	GAANNNNTTC	1 cut(s)	1967
PfeI	GAWTC	6 cut(s)	242, 512, 757, 1161, 2218, 2390
PflFI	GACNNNGTC	1 cut(s)	2144
PfoI	TCCNGGA	1 cut(s)	245
PkrI	GCNGC	8 cut(s)	273, 391, 727, 1356, 1359, 1494, 1896, 2296
PleI	GAGTC	5 cut(s)	646, 670, 1693, 1882, 2543
PluTI	GGCGCC	1 cut(s)	272
PpsI	GAGTC	5 cut(s)	646, 670, 1693, 1882, 2543
Psp124BI	GAGCTC	1 cut(s)	41
Psp6I	CCWGG	8 cut(s)	161, 263, 584, 1077, 1174, 1213, 1225, 1619
PspGI	CCWGG	8 cut(s)	161, 263, 584, 1077, 1174, 1213, 1225, 1619
PspN4I	GGNNCC	5 cut(s)	61, 88, 262, 270, 1014
PspOMI	GGGCCC	1 cut(s)	260
PspPI	GGNCC	5 cut(s)	260, 261, 276, 806, 1154
PstI	CTGCAG	2 cut(s)	1362, 1552
PsuI	RGATCY	1 cut(s)	2324
PsyI	GACNNNGTC	1 cut(s)	2144
PvuII	CAGCTG	3 cut(s)	1357, 1682, 2297
RsaI	GTAC	9 cut(s)	343, 383, 902, 1678, 1687, 2005, 2036, 2174, 2378
RsaNI	GTAC	9 cut(s)	342, 382, 901, 1677, 1686, 2004, 2035, 2173, 2377
RseI	CAYNNNNRTG	1 cut(s)	2364
SacI	GAGCTC	1 cut(s)	41
SacII	CCGCGG	1 cut(s)	275
SapI	GCTCTTC	1 cut(s)	2283
SaqAI	TTAA	3 cut(s)	368, 1283, 1301
SatI	GCNGC	8 cut(s)	272, 390, 726, 1355, 1358, 1493, 1895, 2295
Sau3AI	GATC	5 cut(s)	432, 870, 1268, 2077, 2324
Sau96I	GGNCC	5 cut(s)	260, 261, 276, 806, 1154
SchI	GAGTC	5 cut(s)	646, 671, 1693, 1883, 2543
SduI	GDGCHC	3 cut(s)	15, 41, 264
SfaNI	GCATC	5 cut(s)	1189, 1640, 1696, 1702, 2428
SfcI	CTRYAG	5 cut(s)	990, 1194, 1358, 1525, 1548
SfoI	GGCGCC	1 cut(s)	270
Sfr303I	CCGCGG	1 cut(s)	275
SgrBI	CCGCGG	1 cut(s)	275
SinI	GGWCC	1 cut(s)	806
SmiMI	CAYNNNNRTG	1 cut(s)	2364
SmlI	CTYRAG	1 cut(s)	738
SmoI	CTYRAG	1 cut(s)	738
SpeI	ACTAGT	1 cut(s)	1445
SphI	GCATGC	1 cut(s)	1787
SsiI	CCGC	8 cut(s)	272, 274, 389, 392, 509, 850, 946, 1238
SspDI	GGCGCC	1 cut(s)	268
SspI	AATATT	1 cut(s)	1776
SspMI	CTAG	6 cut(s)	213, 492, 714, 1314, 1446, 2555
SstI	GAGCTC	1 cut(s)	41
StyI	CCWWGG	2 cut(s)	55, 572
TaaI	ACNGT	6 cut(s)	611, 991, 1101, 2008, 2039, 2350
TaiI	ACGT	4 cut(s)	779, 1429, 1990, 2251
TaqI	TCGA	6 cut(s)	435, 801, 1159, 1345, 1501, 1889
TaqII	GACCGA	1 cut(s)	604
TatI	WGTACW	3 cut(s)	341, 900, 2376
TauI	GCSGC	2 cut(s)	274, 392
TfiI	GAWTC	6 cut(s)	242, 512, 757, 1161, 2218, 2390
Tru1I	TTAA	3 cut(s)	368, 1283, 1301
Tru9I	TTAA	3 cut(s)	368, 1283, 1301
TscAI	CASTG	6 cut(s)	1011, 1377, 1425, 1564, 2013, 2033
TseFI	GTSAC	3 cut(s)	1181, 1555, 1756
TseI	GCWGC	6 cut(s)	725, 1354, 1357, 1492, 1894, 2294
Tsp45I	GTSAC	3 cut(s)	1181, 1555, 1756
TspGWI	ACGGA	1 cut(s)	2528
TspRI	CASTG	6 cut(s)	1011, 1377, 1425, 1564, 2013, 2033
Tth111I	GACNNNGTC	1 cut(s)	2144
VpaK11BI	GGWCC	1 cut(s)	806
XapI	RAATTY	7 cut(s)	113, 205, 310, 374, 487, 966, 1537
XbaI	TCTAGA	1 cut(s)	491
XceI	RCATGY	3 cut(s)	1210, 1787, 2020
XmiI	GTMKAC	3 cut(s)	1131, 1984, 2139
XmnI	GAANNNNTTC	1 cut(s)	1967
XspI	CTAG	6 cut(s)	213, 492, 714, 1314, 1446, 2555
ZraI	GACGTC	1 cut(s)	777
Zsp2I	ATGCAT	2 cut(s)	837, 2022

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.