MD14G1027500.v1.1

rho GTPase-activating protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
OG0011795
Physical Location & Seq
Reverse (-)
2479836 .. 2483761
3926 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1027500.v1.1.491

Sequence Viewer

Length: 1560 bp
ATGACCGAGGTCCTCCAATCGCCGTCCCCATCTCACTTCCCTTCCTCTTCAAGCTCTTCCACTCCATGTGCTGCTGCTTCACCTACACCCAATGACTCACCATACCCACATGCCTTTTTAGAGGACACCCTCCATGGGTATTTGGGTTCGGAGGAAGAAGAGGAAGACGAAAGCGAAGACGAAGAGGAAGAAGAGAGGAATAGGAAGGAGAGGGACAGAGAAGGGGATCAGCTTTCGCTTCTGACCCTTTTGGTCACTGCTTTCAGGAGGTCTTTGATTGGTTGCAGTAGTAGTAATAGTGCAGATAGTGCAAGAGGGAAGCTTTCTTCCATGGAGATTGGGTGGCCTTCGAATGTCAGGCATGTTGCCCATGTCACCTTTGATCGGTTCAATGGGTTTCTTGGTTTGCCTGTTGAGCTTGAACCTGAGGTCCCCAGGAGGGCTCCAAGTGCCAGTGCAAACGTTTTTGGGGTCTCAACGGAGTCTATGCAGCTTTCATTTGATGCCAGAGGGAACAGCGTCCCAACAATACTCATTTTGATGCAGAGACATTTGTATGCACAAGGGGGTCTACAGGCTGAAGGAATCTTCAGAATTAATGCTGAGAACAGTCAGGAGGAGTACGTCAGGGACCAATTAAATCGGGGAGTGATACCAGAGGGCATTGACGTGCACTGTTTGGCTGGTCTTATTAAGGCCTGGTTCCGAGAACTTCCAACTGGTGTTTTGGACTCTCTAACACCAGAGCAGGTAATGCAGTCCCACTCGGAAGAGGAGTGTGCTGAACTTGTTAGGCTCCTACCTCCAACAGAAGCTGCGTTATTGGATTGGGCAGTAAACCTAATGGCTGATGTTGCACAAATGGAACACTTCAACAAGATGAATGCGCGCAATATTGCCATGGTGTTTGCACCAAACATGACTCACATGGTAGATCCTTTGACTGCATTGATGTATGCTGTCCAAGTGATGAATTTCCTCAAGACTCTTATTGTCAAGACACTAAAACAACGAGAAGAATCTTTGGTGGAAACAGCACCTATACCCCACCTAGAGCCTTCTGACGAGGATGAGTACCAAAGCACTCTTCAACCATATCACAAAGAGGCCAACGAGGAGGCTAACGAGGAAAATGAAGAGGAGGGCGTATTTGTTGGTGAAGAACCTGATTCACAGAGCCCCCTTCATTCTACACAAAATGATCCCACAAGGGCAACAACTGAAAGTGGATCTCAAACTTTCCTATCTTCTATCAAGAATATCATTCCGGGAGGAAACTGGTTTCTGGCAGATAATTGTCCTTGTGAGGTTGTATCCCAAGTTAGCCCTTTGGCAAACGGGCCCCAAGAAGACGGTTTAACAAGTTCAGGTAGAGAGGCTCAACCAAACATTTGGAAGAGCAAAAGTGGTCAATCAAGCGGTCCGAGTCTGAAAAGGGGCCCCAAGAAGGTAAAAGAGCAGCTGCTGATTCAAACTGCTGTGACTGCAGACAAGAGCAAAAGAAGTGGAATTCTTAGCCGCATAAATTCGAGGACGGAGCTGGCTGAAGGTTGGCGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0006950 GO:0008150 GO:0009628 GO:0034059 GO:0036293 GO:0050896 GO:0070482
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PBD RhoGAP

Protein Analysis

520

Amino Acids

57.25

Weight (kDa)

4.75

Isoelectric Point (pI)

65.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RhoGAP PF00620 175 - 309 3.4e-22 RhoGAP domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011795)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G11490
fragaria_vesca FvH4_6g19150
malus_domestica MD12G1027300.v1.1 MD14G1027500.v1.1
prunus_persica Prupe.7G104200_v2.0.a1
pyrus_communis pycom12g02620 pycom14g02620
rosa_chinensis RchiOBHm_Chr3g0474261
rosa_laevigata RLG00000023935
rosa_multiflora Rmu_sc0001803.1_g000025 Rmu_sc0004507.1_g000020 Rmu_sc0029669.1_g000001
rosa_roxburghii Rroxscaffold_6G00407400
rosa_rugosa Rorug03G0139800
rosa_samantha Rh3AG190400 Rh3BG219600 Rh3CG214800 Rh3DG215100
rosa_wichuraiana Rw3G017370

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 739
AccI GTMKAC 1 cut(s) 571
AccII CGCG 1 cut(s) 889
AciI CCGC 2 cut(s) 1419, 1519
AclI AACGTT 1 cut(s) 462
AclWI GGATC 4 cut(s) 234, 929, 1196, 1237
AcsI RAATTY 3 cut(s) 973, 1509, 1525
AcuI CTGAAG 2 cut(s) 574, 600
AfaI GTAC 2 cut(s) 623, 1076
AfiI CCNNNNNNNGG 4 cut(s) 135, 384, 439, 1447
AgsI TTSAA 6 cut(s) 51, 391, 422, 874, 1091, 1472
AjiI CACGTC 1 cut(s) 670
AjnI CCWGG 2 cut(s) 434, 698
AjuI GAANNNNNNNTTGG 2 cut(s) 1071, 1103
AloI GAACNNNNNNTCC 2 cut(s) 414, 446
AluBI AGCT 8 cut(s) 54, 232, 322, 418, 493, 815, 1462, 1540
AluI AGCT 8 cut(s) 54, 232, 322, 418, 493, 815, 1462, 1540
Alw21I GWGCWC 1 cut(s) 675
Alw26I GTCTC 2 cut(s) 478, 541
Alw44I GTGCAC 1 cut(s) 671
AlwI GGATC 4 cut(s) 234, 929, 1196, 1237
AlwNI CAGNNNCTG 2 cut(s) 815, 1465
AoxI GGCC 5 cut(s) 344, 696, 1107, 1340, 1438
ApaI GGGCCC 2 cut(s) 1344, 1442
ApaLI GTGCAC 1 cut(s) 671
ApeKI GCWGC 6 cut(s) 71, 74, 490, 815, 1459, 1462
ApoI RAATTY 3 cut(s) 973, 1509, 1525
AseI ATTAAT 1 cut(s) 597
AspLEI GCGC 2 cut(s) 889, 891
AspS9I GGNCC 8 cut(s) 10, 430, 631, 1340, 1341, 1421, 1438, 1439
AsuC2I CCSGG 1 cut(s) 1269
AsuHPI GGTGA 4 cut(s) 72, 90, 367, 1169
AsuII TTCGAA 1 cut(s) 350
AvaII GGWCC 4 cut(s) 10, 430, 631, 1421
AxyI CCTNAGG 1 cut(s) 426
BaeGI GKGCMC 3 cut(s) 675, 1344, 1442
BanII GRGCYC 4 cut(s) 445, 1181, 1344, 1442
BbsI GAAGAC 3 cut(s) 171, 183, 1356
Bbv12I GWGCWC 1 cut(s) 675
BbvI GCAGC 6 cut(s) 58, 61, 502, 802, 1449, 1471
BccI CCATC 1 cut(s) 37
BceAI ACGGC 1 cut(s) 7
BciT130I CCWGG 2 cut(s) 436, 700
BciVI GTATCC 1 cut(s) 1324
BcnI CCSGG 1 cut(s) 1269
BcoDI GTCTC 2 cut(s) 478, 541
BfaI CTAG 1 cut(s) 1052
BfmI CTRYAG 2 cut(s) 572, 1485
BfuAI ACCTGC 1 cut(s) 739
BfuI GTATCC 1 cut(s) 1324
BisI GCNGC 7 cut(s) 72, 75, 491, 816, 1460, 1463, 1519
BlsI GCNGC 7 cut(s) 73, 76, 492, 817, 1461, 1464, 1520
Bme1390I CCNGG 3 cut(s) 436, 700, 1269
Bme18I GGWCC 4 cut(s) 10, 430, 631, 1421
BmgBI CACGTC 1 cut(s) 670
BmgT120I GGNCC 8 cut(s) 10, 430, 631, 1340, 1341, 1421, 1438, 1439
BmrFI CCNGG 3 cut(s) 436, 700, 1269
BmsI GCATC 2 cut(s) 493, 531
BoxI GACNNNNGTC 1 cut(s) 8
BpiI GAAGAC 3 cut(s) 171, 183, 1356
Bpu14I TTCGAA 1 cut(s) 350
BpuEI CTTGAG 1 cut(s) 965
BpuMI CCSGG 1 cut(s) 1269
BsaI GGTCTC 1 cut(s) 478
BsaJI CCNNGG 5 cut(s) 6, 133, 330, 434, 900
BsaXI ACNNNNNCTCC 2 cut(s) 326, 356
Bsc4I CCNNNNNNNGG 4 cut(s) 135, 384, 439, 1447
Bse1I ACTGG 3 cut(s) 453, 724, 1283
Bse21I CCTNAGG 1 cut(s) 426
BseBI CCWGG 2 cut(s) 436, 700
BseDI CCNNGG 5 cut(s) 6, 133, 330, 434, 900
BseGI GGATG 1 cut(s) 1075
BseLI CCNNNNNNNGG 4 cut(s) 135, 384, 439, 1447
BseMII CTCAG 2 cut(s) 417, 594
BseNI ACTGG 3 cut(s) 453, 724, 1283
BsePI GCGCGC 1 cut(s) 887
BseRI GAGGAG 4 cut(s) 632, 788, 1130, 1154
BseSI GKGCMC 3 cut(s) 675, 1344, 1442
BseXI GCAGC 6 cut(s) 58, 61, 502, 802, 1449, 1471
BsgI GTGCAG 1 cut(s) 321
Bsh1236I CGCG 1 cut(s) 889
BshFI GGCC 5 cut(s) 346, 698, 1109, 1342, 1440
BsiHKAI GWGCWC 1 cut(s) 675
BsiSI CCGG 1 cut(s) 1268
BslFI GGGAC 6 cut(s) 10, 227, 416, 506, 644, 745
BslI CCNNNNNNNGG 4 cut(s) 135, 384, 439, 1447
BsmAI GTCTC 2 cut(s) 478, 541
BsmFI GGGAC 6 cut(s) 10, 227, 416, 506, 644, 745
BsmI GAATGC 1 cut(s) 889
BsnI GGCC 5 cut(s) 346, 698, 1109, 1342, 1440
Bso31I GGTCTC 1 cut(s) 478
Bsp119I TTCGAA 1 cut(s) 350
Bsp120I GGGCCC 2 cut(s) 1340, 1438
Bsp1286I GDGCHC 5 cut(s) 445, 675, 1181, 1344, 1442
Bsp143I GATC 5 cut(s) 226, 382, 934, 1201, 1229
Bsp19I CCATGG 3 cut(s) 133, 330, 900
BspACI CCGC 2 cut(s) 1419, 1519
BspANI GGCC 5 cut(s) 346, 698, 1109, 1342, 1440
BspCNI CTCAG 2 cut(s) 418, 595
BspFNI CGCG 1 cut(s) 889
BspMAI CTGCAG 1 cut(s) 1489
BspMI ACCTGC 1 cut(s) 739
BspPI GGATC 4 cut(s) 234, 929, 1196, 1237
BspQI GCTCTTC 2 cut(s) 61, 1391
BspT104I TTCGAA 1 cut(s) 350
BspTNI GGTCTC 1 cut(s) 478
BsrI ACTGG 3 cut(s) 453, 724, 1283
BssECI CCNNGG 5 cut(s) 6, 133, 330, 434, 900
BssHII GCGCGC 1 cut(s) 887
BssMI GATC 5 cut(s) 226, 382, 934, 1201, 1229
BssT1I CCWWGG 3 cut(s) 133, 330, 900
Bst2UI CCWGG 2 cut(s) 436, 700
Bst4CI ACNGT 3 cut(s) 611, 677, 1355
Bst6I CTCTTC 9 cut(s) 52, 61, 153, 177, 186, 765, 1092, 1131, 1391
BstAPI GCANNNNNTGC 2 cut(s) 308, 754
BstBI TTCGAA 1 cut(s) 350
BstC8I GCNNGC 2 cut(s) 889, 1542
BstDEI CTNAG 3 cut(s) 426, 603, 1514
BstDSI CCRYGG 3 cut(s) 133, 330, 900
BstF5I GGATG 1 cut(s) 1075
BstFNI CGCG 1 cut(s) 889
BstHHI GCGC 2 cut(s) 889, 891
BstKTI GATC 5 cut(s) 229, 385, 937, 1204, 1232
BstMAI GTCTC 2 cut(s) 478, 541
BstMBI GATC 5 cut(s) 226, 382, 934, 1201, 1229
BstMWI GCNNNNNNNGC 6 cut(s) 308, 415, 449, 754, 854, 1484
BstNI CCWGG 2 cut(s) 436, 700
BstNSI RCATGY 2 cut(s) 113, 365
BstPAI GACNNNNGTC 1 cut(s) 8
BstSCI CCNGG 3 cut(s) 434, 698, 1267
BstSFI CTRYAG 2 cut(s) 572, 1485
BstSLI GKGCMC 3 cut(s) 675, 1344, 1442
BstUI CGCG 1 cut(s) 889
BstV1I GCAGC 6 cut(s) 58, 61, 502, 802, 1449, 1471
BstV2I GAAGAC 3 cut(s) 171, 183, 1356
BstX2I RGATCY 2 cut(s) 934, 1229
BstXI CCANNNNNNTGG 1 cut(s) 1392
BstYI RGATCY 2 cut(s) 934, 1229
Bsu36I CCTNAGG 1 cut(s) 426
BsuI GTATCC 1 cut(s) 1324
BsuRI GGCC 5 cut(s) 346, 698, 1109, 1342, 1440
BtgI CCRYGG 3 cut(s) 133, 330, 900
BtrI CACGTC 1 cut(s) 670
BtsCI GGATG 1 cut(s) 1075
BtsI GCAGTG 1 cut(s) 255
BtsIMutI CAGTG 3 cut(s) 255, 460, 673
BveI ACCTGC 1 cut(s) 739
Cac8I GCNNGC 2 cut(s) 889, 1542
CaiI CAGNNNCTG 2 cut(s) 815, 1465
CfoI GCGC 2 cut(s) 889, 891
Cfr13I GGNCC 8 cut(s) 10, 430, 631, 1340, 1341, 1421, 1438, 1439
CpoI CGGWCCG 1 cut(s) 1421
CseI GACGC 1 cut(s) 508
Csp6I GTAC 2 cut(s) 622, 1075
CspCI CAANNNNNGTGG 2 cut(s) 1486, 1521
CspI CGGWCCG 1 cut(s) 1421
CviAII CATG 9 cut(s) 66, 110, 134, 331, 362, 371, 901, 919, 928
CviQI GTAC 2 cut(s) 622, 1075
DdeI CTNAG 3 cut(s) 426, 603, 1514
DpnI GATC 5 cut(s) 228, 384, 936, 1203, 1231
DpnII GATC 5 cut(s) 226, 382, 934, 1201, 1229
Eam1104I CTCTTC 9 cut(s) 52, 61, 153, 177, 186, 765, 1092, 1131, 1391
EarI CTCTTC 9 cut(s) 52, 61, 153, 177, 186, 765, 1092, 1131, 1391
Eco130I CCWWGG 3 cut(s) 133, 330, 900
Eco147I AGGCCT 1 cut(s) 698
Eco24I GRGCYC 4 cut(s) 445, 1181, 1344, 1442
Eco31I GGTCTC 1 cut(s) 478
Eco47I GGWCC 4 cut(s) 10, 430, 631, 1421
Eco57I CTGAAG 2 cut(s) 574, 600
Eco81I CCTNAGG 1 cut(s) 426
EcoO109I RGGNCCY 5 cut(s) 10, 430, 1341, 1438, 1439
EcoRI GAATTC 1 cut(s) 1509
EcoRII CCWGG 2 cut(s) 434, 698
EcoT14I CCWWGG 3 cut(s) 133, 330, 900
EcoT38I GRGCYC 4 cut(s) 445, 1181, 1344, 1442
ErhI CCWWGG 3 cut(s) 133, 330, 900
FaeI CATG 9 cut(s) 69, 113, 137, 334, 365, 374, 904, 922, 931
FaqI GGGAC 6 cut(s) 10, 227, 416, 506, 644, 745
FatI CATG 9 cut(s) 65, 109, 133, 330, 361, 370, 900, 918, 927
FblI GTMKAC 1 cut(s) 571
Fnu4HI GCNGC 7 cut(s) 72, 75, 491, 816, 1460, 1463, 1519
FokI GGATG 1 cut(s) 1082
FriOI GRGCYC 4 cut(s) 445, 1181, 1344, 1442
Fsp4HI GCNGC 7 cut(s) 72, 75, 491, 816, 1460, 1463, 1519
FspBI CTAG 1 cut(s) 1052
GlaI GCGC 2 cut(s) 888, 890
GluI GCNGC 7 cut(s) 72, 75, 491, 816, 1460, 1463, 1519
HaeIII GGCC 5 cut(s) 346, 698, 1109, 1342, 1440
HapII CCGG 1 cut(s) 1268
HgaI GACGC 1 cut(s) 508
HhaI GCGC 2 cut(s) 889, 891
Hin1II CATG 9 cut(s) 69, 113, 137, 334, 365, 374, 904, 922, 931
Hin6I GCGC 2 cut(s) 887, 889
HinP1I GCGC 2 cut(s) 887, 889
HindIII AAGCTT 1 cut(s) 320
HpaII CCGG 1 cut(s) 1268
HphI GGTGA 4 cut(s) 72, 90, 367, 1169
Hpy166II GTNNAC 3 cut(s) 572, 673, 838
Hpy188I TCNGA 8 cut(s) 151, 243, 593, 707, 769, 1063, 1425, 1431
Hpy188III TCNNGA 5 cut(s) 265, 614, 982, 997, 1255
Hpy8I GTNNAC 3 cut(s) 572, 673, 838
HpyAV CCTTC 9 cut(s) 51, 199, 215, 357, 575, 1068, 1193, 1441, 1541
HpyCH4III ACNGT 3 cut(s) 611, 677, 1355
HpyCH4IV ACGT 3 cut(s) 462, 624, 669
HpyF10VI GCNNNNNNNGC 6 cut(s) 308, 415, 449, 754, 854, 1484
HpyF3I CTNAG 3 cut(s) 426, 603, 1514
HpySE526I ACGT 3 cut(s) 462, 624, 669
Hsp92II CATG 9 cut(s) 69, 113, 137, 334, 365, 374, 904, 922, 931
HspAI GCGC 2 cut(s) 887, 889
Kzo9I GATC 5 cut(s) 226, 382, 934, 1201, 1229
LguI GCTCTTC 2 cut(s) 61, 1391
LmnI GCTCC 3 cut(s) 448, 801, 1537
Lsp1109I GCAGC 6 cut(s) 58, 61, 502, 802, 1449, 1471
LweI GCATC 2 cut(s) 493, 531
MaeI CTAG 1 cut(s) 1052
MaeII ACGT 3 cut(s) 462, 624, 669
MaeIII GTNAC 3 cut(s) 253, 373, 1480
MalI GATC 5 cut(s) 228, 384, 936, 1203, 1231
MboI GATC 5 cut(s) 226, 382, 934, 1201, 1229
MflI RGATCY 2 cut(s) 934, 1229
MhlI GDGCHC 5 cut(s) 445, 675, 1181, 1344, 1442
MluCI AATT 6 cut(s) 594, 635, 973, 1294, 1509, 1525
MlyI GAGTC 6 cut(s) 89, 491, 725, 916, 979, 1435
MmeI TCCRAC 2 cut(s) 740, 830
MseI TTAA 4 cut(s) 597, 638, 693, 1358
MslI CAYNNNNRTG 3 cut(s) 539, 555, 668
MspA1I CMGCKG 1 cut(s) 1462
MspI CCGG 1 cut(s) 1268
MspR9I CCNGG 3 cut(s) 436, 700, 1269
Mva1269I GAATGC 1 cut(s) 889
MvaI CCWGG 2 cut(s) 436, 700
MvnI CGCG 1 cut(s) 889
MwoI GCNNNNNNNGC 6 cut(s) 308, 415, 449, 754, 854, 1484
NciI CCSGG 1 cut(s) 1269
NcoI CCATGG 3 cut(s) 133, 330, 900
NdeII GATC 5 cut(s) 226, 382, 934, 1201, 1229
NlaIII CATG 9 cut(s) 69, 113, 137, 334, 365, 374, 904, 922, 931
NmuCI GTSAC 3 cut(s) 253, 373, 1480
NspI RCATGY 2 cut(s) 113, 365
NspV TTCGAA 1 cut(s) 350
PauI GCGCGC 1 cut(s) 887
PceI AGGCCT 1 cut(s) 698
PciSI GCTCTTC 2 cut(s) 61, 1391
PctI GAATGC 1 cut(s) 889
PfeI GAWTC 4 cut(s) 585, 1019, 1169, 1468
PfoI TCCNGGA 1 cut(s) 1267
PkrI GCNGC 7 cut(s) 73, 76, 492, 817, 1461, 1464, 1520
PleI GAGTC 6 cut(s) 89, 490, 725, 916, 979, 1434
PpsI GAGTC 6 cut(s) 89, 490, 725, 916, 979, 1434
PpuMI RGGWCCY 2 cut(s) 10, 430
PshAI GACNNNNGTC 1 cut(s) 8
PshBI ATTAAT 1 cut(s) 597
Psp1406I AACGTT 1 cut(s) 462
Psp5II RGGWCCY 2 cut(s) 10, 430
Psp6I CCWGG 2 cut(s) 434, 698
PspGI CCWGG 2 cut(s) 434, 698
PspOMI GGGCCC 2 cut(s) 1340, 1438
PspPI GGNCC 8 cut(s) 10, 430, 631, 1340, 1341, 1421, 1438, 1439
PspPPI RGGWCCY 2 cut(s) 10, 430
PstI CTGCAG 1 cut(s) 1489
PstNI CAGNNNCTG 2 cut(s) 815, 1465
PsuI RGATCY 2 cut(s) 934, 1229
PteI GCGCGC 1 cut(s) 887
PvuII CAGCTG 1 cut(s) 1462
RsaI GTAC 2 cut(s) 623, 1076
RsaNI GTAC 2 cut(s) 622, 1075
RseI CAYNNNNRTG 3 cut(s) 539, 555, 668
Rsr2I CGGWCCG 1 cut(s) 1421
RsrII CGGWCCG 1 cut(s) 1421
SapI GCTCTTC 2 cut(s) 61, 1391
SaqAI TTAA 4 cut(s) 597, 638, 693, 1358
SatI GCNGC 7 cut(s) 72, 75, 491, 816, 1460, 1463, 1519
Sau3AI GATC 5 cut(s) 226, 382, 934, 1201, 1229
Sau96I GGNCC 8 cut(s) 10, 430, 631, 1340, 1341, 1421, 1438, 1439
SchI GAGTC 6 cut(s) 89, 491, 725, 916, 979, 1435
ScrFI CCNGG 3 cut(s) 436, 700, 1269
SduI GDGCHC 5 cut(s) 445, 675, 1181, 1344, 1442
SfaNI GCATC 2 cut(s) 493, 531
SfcI CTRYAG 2 cut(s) 572, 1485
SfuI TTCGAA 1 cut(s) 350
SinI GGWCC 4 cut(s) 10, 430, 631, 1421
SmiMI CAYNNNNRTG 3 cut(s) 539, 555, 668
SmlI CTYRAG 1 cut(s) 980
SmoI CTYRAG 1 cut(s) 980
Sse9I AATT 6 cut(s) 594, 635, 973, 1294, 1509, 1525
SseBI AGGCCT 1 cut(s) 698
SsiI CCGC 2 cut(s) 1419, 1519
SspI AATATT 1 cut(s) 895
SspMI CTAG 1 cut(s) 1052
StuI AGGCCT 1 cut(s) 698
StyD4I CCNGG 3 cut(s) 434, 698, 1267
StyI CCWWGG 3 cut(s) 133, 330, 900
TaaI ACNGT 3 cut(s) 611, 677, 1355
TaiI ACGT 3 cut(s) 465, 627, 672
TaqI TCGA 2 cut(s) 350, 1529
TaqII GACCGA 1 cut(s) 20
TasI AATT 6 cut(s) 594, 635, 973, 1294, 1509, 1525
TauI GCSGC 1 cut(s) 1521
TfiI GAWTC 4 cut(s) 585, 1019, 1169, 1468
Tru1I TTAA 4 cut(s) 597, 638, 693, 1358
Tru9I TTAA 4 cut(s) 597, 638, 693, 1358
TscAI CASTG 3 cut(s) 262, 460, 680
TseFI GTSAC 3 cut(s) 253, 373, 1480
TseI GCWGC 6 cut(s) 71, 74, 490, 815, 1459, 1462
Tsp45I GTSAC 3 cut(s) 253, 373, 1480
TspDTI ATGAA 5 cut(s) 486, 896, 986, 1149, 1175
TspGWI ACGGA 2 cut(s) 494, 1550
TspRI CASTG 3 cut(s) 262, 460, 680
VneI GTGCAC 1 cut(s) 671
VpaK11BI GGWCC 4 cut(s) 10, 430, 631, 1421
VspI ATTAAT 1 cut(s) 597
XapI RAATTY 3 cut(s) 973, 1509, 1525
XceI RCATGY 2 cut(s) 113, 365
XmiI GTMKAC 1 cut(s) 571
XspI CTAG 1 cut(s) 1052
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.