Prupe.7G104200_v2.0.a1

rho GTPase-activating protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Forward (+)
13355218 .. 13359792
4575 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G104200.1

Sequence Viewer

Length: 1593 bp
ATGACTGAGGTGCTCCAATGCCCATCCCCATCTCACTTCCCTTCACCCTCAAGCTCTTCCACACCATGTGCTCCACCTACACCCAATGATGGGCCATACCCACATGCCCTTATTAACAGTCCCACAATAGAAGACAGTCTCCAAGGCTATTTGGGCTCCGAGGAAGAGGAAGAGGAAGAGGAAGAAGAAGACGAAGAGGAAGAGGAAGAAGGAGAGGAGGAAGAAGAAGAAGAAAGGAAAAGGAAAGAAAGGGACAGAGAAGGAGATCAGCTTTCGCTCTTGACACTTTTGGTGACTGCTTTCAGGAGGTCTTTGATTGGGGGGTGTAGTAATACTACTAGCACTGATACTGGTAGAGGAAAGCTGTCTTCTATGGAGATTGGTTGGCCTTCAAATGTCAGGCATGTTGCCCATGTCACCTTTGATCGCTTCAATGGCTTTCTTGGTTTGCCTTCTGAGCTTGAACCCGAGGTTCCCAGGAGGGCTCCAAGTGCTAGTGCAAATGTTTTTGGGGTTTCAACGGAGTCTATGCAGCTTTCATTTGATGCCAGAGGAAACAGTGTCCCAACAATACTCATTTTGATGCAGAGACATTTGTATGCACAAGGTGGTCTTCAGGCAGAAGGAATCTTCAGAATTAATGCCGAGAACAGTCAGGAGGAGTACGTTAGGGACCAATTGAATAGGGGAGTAATACCAGAGGGCATTGACGTGCACTGTTTGGCGGGTCTTATTAAGGCTTGGTTTAGAGAACTACCAACTGGTGTGTTGGACTCTCTCACGCCAGAGCAGGTAATGCAGTCCCAGTCGGAAGAGGAGTGTGCTCAACTTGTTAGGCTCCTCCCCCCAACAGAAGCCGCACTATTGGATTGGGCAGTAAATCTAATGGCTGATGTTGCACAAATGGAACACTTAAACAAGATGAATGCCCGCAATATTGCCATGGTGTTTGCACCAAACATGACTCAAATGGTAGATCCTTTGACTGCATTGATGTATGCTGTCCAAGTGATGAATTTCCTCAAGACTCTTATTGTCAAGACACTAAGAGAAAGAGAAGAGTCTATGGTAGAAACAGCCCCTGTCCCCCGCCTAGAGCCTACTGATGAGGATGGGCACCAAAGTACTTTTCAACCATATCTCAAAGAGGCCAACAAGGAGGCCAACAAGGAAAATGAAGAGGAGAACGTATTTGTTGGTGAAGAACCCGATTTAGAAAGCCCGGCTCATTCTGCACAAGATGACTCCACAACTGGAACTGGATCTCAAACTTTCCTATCTTCTATCAAGAATATCATTCCTGGAGGAAATTGGTTTCTGGCTGATAATTGTCCATGTGAGGTTGTATCCCAAGTTAACTCTTTGACAAATGGGCTCCAAGAAGATGGTTCAACAGGTGCAGGTAGAGAGGCTCAACCAAACATTTGGAAGAGCAAAACAGGTCAATCAAGTGGTTCGAATCTGAAGAAGGGATCCAAGAAGGTTAACGAGCAGCTAATGATTCAGACTGCTGGGCCAGCAGACAAGAGCAAGAGAACTGGAATTCTTAGCCGCATTAATTCGAGGACAGAGCTGGCTGAAGGTTGGCGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

531

Amino Acids

58.46

Weight (kDa)

4.59

Isoelectric Point (pI)

66.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0011795)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 781, 1391
AccB1I GGYRCC 1 cut(s) 1116
AciI CCGC 5 cut(s) 725, 858, 931, 1090, 1552
AclWI GGATC 4 cut(s) 971, 1270, 1467, 1480
AcsI RAATTY 2 cut(s) 1015, 1542
AcuI CTGAAG 3 cut(s) 599, 616, 1484
AdeI CACNNNGTG 2 cut(s) 68, 608
AfaI GTAC 2 cut(s) 665, 1126
AfiI CCNNNNNNNGG 2 cut(s) 89, 90
AgsI TTSAA 7 cut(s) 393, 433, 464, 519, 682, 1133, 1392
AjiI CACGTC 1 cut(s) 712
AjnI CCWGG 2 cut(s) 476, 1300
AjuI GAANNNNNNNTTGG 2 cut(s) 1113, 1145
AluBI AGCT 7 cut(s) 54, 271, 364, 460, 535, 1495, 1573
AluI AGCT 7 cut(s) 54, 271, 364, 460, 535, 1495, 1573
Alw21I GWGCWC 4 cut(s) 15, 73, 717, 826
Alw26I GTCTC 2 cut(s) 143, 583
Alw44I GTGCAC 1 cut(s) 713
AlwI GGATC 4 cut(s) 971, 1270, 1467, 1480
AlwNI CAGNNNCTG 1 cut(s) 1082
Ama87I CYCGRG 1 cut(s) 467
AoxI GGCC 5 cut(s) 92, 386, 1149, 1161, 1514
ApaLI GTGCAC 1 cut(s) 713
ApeKI GCWGC 2 cut(s) 532, 1492
ApoI RAATTY 2 cut(s) 1015, 1542
AseI ATTAAT 2 cut(s) 639, 1557
AspS9I GGNCC 3 cut(s) 92, 673, 1514
AsuC2I CCSGG 1 cut(s) 1223
AsuHPI GGTGA 4 cut(s) 36, 304, 409, 1211
AsuII TTCGAA 1 cut(s) 1457
AvaI CYCGRG 1 cut(s) 467
AvaII GGWCC 1 cut(s) 673
BaeGI GKGCMC 2 cut(s) 717, 1119
BamHI GGATCC 1 cut(s) 1472
BanI GGYRCC 1 cut(s) 1116
BanII GRGCYC 3 cut(s) 158, 487, 1377
BbsI GAAGAC 4 cut(s) 138, 195, 360, 605
Bbv12I GWGCWC 4 cut(s) 15, 73, 717, 826
BbvI GCAGC 2 cut(s) 544, 1504
BccI CCATC 5 cut(s) 31, 37, 83, 1106, 1379
BciT130I CCWGG 2 cut(s) 478, 1302
BciVI GTATCC 1 cut(s) 1357
BcnI CCSGG 1 cut(s) 1223
BcoDI GTCTC 2 cut(s) 143, 583
BfaI CTAG 3 cut(s) 339, 495, 1094
BfuAI ACCTGC 2 cut(s) 781, 1391
BfuI GTATCC 1 cut(s) 1357
BisI GCNGC 4 cut(s) 533, 858, 1493, 1552
BlsI GCNGC 4 cut(s) 534, 859, 1494, 1553
BmcAI AGTACT 1 cut(s) 1126
Bme1390I CCNGG 3 cut(s) 478, 1223, 1302
Bme18I GGWCC 1 cut(s) 673
BmeT110I CYCGRG 1 cut(s) 467
BmgBI CACGTC 1 cut(s) 712
BmgT120I GGNCC 3 cut(s) 92, 673, 1514
BmiI GGNNCC 8 cut(s) 157, 474, 486, 674, 839, 1118, 1376, 1474
BmrFI CCNGG 3 cut(s) 478, 1223, 1302
BmrI ACTGGG 1 cut(s) 799
BmsI GCATC 2 cut(s) 535, 573
BmuI ACTGGG 1 cut(s) 799
BpiI GAAGAC 4 cut(s) 138, 195, 360, 605
BpmI CTGGAG 1 cut(s) 1323
Bpu14I TTCGAA 1 cut(s) 1457
BpuEI CTTGAG 2 cut(s) 34, 1007
BpuMI CCSGG 1 cut(s) 1223
BsaJI CCNNGG 5 cut(s) 142, 159, 468, 476, 942
Bsc4I CCNNNNNNNGG 2 cut(s) 89, 90
Bse1I ACTGG 6 cut(s) 355, 766, 805, 1258, 1264, 1543
BseBI CCWGG 2 cut(s) 478, 1302
BseDI CCNNGG 5 cut(s) 142, 159, 468, 476, 942
BseGI GGATG 2 cut(s) 23, 1117
BseLI CCNNNNNNNGG 2 cut(s) 89, 90
BseMII CTCAG 1 cut(s) 447
BseNI ACTGG 6 cut(s) 355, 766, 805, 1258, 1264, 1543
BseRI GAGGAG 5 cut(s) 230, 674, 830, 830, 1196
BseSI GKGCMC 2 cut(s) 717, 1119
BseXI GCAGC 2 cut(s) 544, 1504
BseYI CCCAGC 1 cut(s) 1511
BsgI GTGCAG 2 cut(s) 1218, 1419
BshFI GGCC 5 cut(s) 94, 388, 1151, 1163, 1516
BshNI GGYRCC 1 cut(s) 1116
BsiHKAI GWGCWC 4 cut(s) 15, 73, 717, 826
BsiHKCI CYCGRG 1 cut(s) 467
BsiSI CCGG 1 cut(s) 1223
BslFI GGGAC 6 cut(s) 105, 266, 548, 686, 787, 1070
BslI CCNNNNNNNGG 2 cut(s) 89, 90
BsmAI GTCTC 2 cut(s) 143, 583
BsmFI GGGAC 6 cut(s) 105, 266, 548, 686, 787, 1070
BsmI GAATGC 1 cut(s) 931
BsnI GGCC 5 cut(s) 94, 388, 1151, 1163, 1516
BsoBI CYCGRG 1 cut(s) 467
Bsp119I TTCGAA 1 cut(s) 1457
Bsp1286I GDGCHC 8 cut(s) 15, 73, 158, 487, 717, 826, 1119, 1377
Bsp143I GATC 5 cut(s) 265, 424, 976, 1262, 1472
Bsp19I CCATGG 1 cut(s) 942
BspACI CCGC 5 cut(s) 725, 858, 931, 1090, 1552
BspANI GGCC 5 cut(s) 94, 388, 1151, 1163, 1516
BspCNI CTCAG 1 cut(s) 448
BspLI GGNNCC 8 cut(s) 157, 474, 486, 674, 839, 1118, 1376, 1474
BspMI ACCTGC 2 cut(s) 781, 1391
BspPI GGATC 4 cut(s) 971, 1270, 1467, 1480
BspQI GCTCTTC 2 cut(s) 61, 1424
BspT104I TTCGAA 1 cut(s) 1457
BspT107I GGYRCC 1 cut(s) 1116
BsrI ACTGG 6 cut(s) 355, 766, 805, 1258, 1264, 1543
BssECI CCNNGG 5 cut(s) 142, 159, 468, 476, 942
BssMI GATC 5 cut(s) 265, 424, 976, 1262, 1472
BssT1I CCWWGG 2 cut(s) 142, 942
Bst2UI CCWGG 2 cut(s) 478, 1302
Bst4CI ACNGT 5 cut(s) 119, 137, 560, 653, 719
BstAPI GCANNNNNTGC 1 cut(s) 796
BstBI TTCGAA 1 cut(s) 1457
BstC8I GCNNGC 3 cut(s) 931, 1518, 1575
BstDEI CTNAG 4 cut(s) 6, 456, 1046, 1547
BstDSI CCRYGG 1 cut(s) 942
BstF5I GGATG 2 cut(s) 23, 1117
BstKTI GATC 5 cut(s) 268, 427, 979, 1265, 1475
BstMAI GTCTC 2 cut(s) 143, 583
BstMBI GATC 5 cut(s) 265, 424, 976, 1262, 1472
BstMWI GCNNNNNNNGC 8 cut(s) 153, 435, 457, 491, 796, 896, 1232, 1517
BstNI CCWGG 2 cut(s) 478, 1302
BstNSI RCATGY 2 cut(s) 107, 407
BstSCI CCNGG 3 cut(s) 476, 1221, 1300
BstSLI GKGCMC 2 cut(s) 717, 1119
BstV1I GCAGC 2 cut(s) 544, 1504
BstV2I GAAGAC 4 cut(s) 138, 195, 360, 605
BstX2I RGATCY 3 cut(s) 976, 1262, 1472
BstXI CCANNNNNNTGG 2 cut(s) 1385, 1425
BstYI RGATCY 3 cut(s) 976, 1262, 1472
BsuI GTATCC 1 cut(s) 1357
BsuRI GGCC 5 cut(s) 94, 388, 1151, 1163, 1516
BtgI CCRYGG 1 cut(s) 942
BtrI CACGTC 1 cut(s) 712
BtsCI GGATG 2 cut(s) 23, 1117
BtsIMutI CAGTG 3 cut(s) 342, 565, 715
BveI ACCTGC 2 cut(s) 781, 1391
Cac8I GCNNGC 3 cut(s) 931, 1518, 1575
CaiI CAGNNNCTG 1 cut(s) 1082
Cfr13I GGNCC 3 cut(s) 92, 673, 1514
Csp6I GTAC 2 cut(s) 664, 1125
CviAII CATG 7 cut(s) 66, 104, 404, 413, 943, 961, 1335
CviQI GTAC 2 cut(s) 664, 1125
DdeI CTNAG 4 cut(s) 6, 456, 1046, 1547
DpnI GATC 5 cut(s) 267, 426, 978, 1264, 1474
DpnII GATC 5 cut(s) 265, 424, 976, 1262, 1472
DraIII CACNNNGTG 2 cut(s) 68, 608
Eco130I CCWWGG 2 cut(s) 142, 942
Eco24I GRGCYC 3 cut(s) 158, 487, 1377
Eco47I GGWCC 1 cut(s) 673
Eco57I CTGAAG 3 cut(s) 599, 616, 1484
Eco88I CYCGRG 1 cut(s) 467
EcoRI GAATTC 1 cut(s) 1542
EcoRII CCWGG 2 cut(s) 476, 1300
EcoT14I CCWWGG 2 cut(s) 142, 942
EcoT38I GRGCYC 3 cut(s) 158, 487, 1377
ErhI CCWWGG 2 cut(s) 142, 942
FaeI CATG 7 cut(s) 69, 107, 407, 416, 946, 964, 1338
FalI AAGNNNNNCTT 2 cut(s) 597, 629
FaqI GGGAC 6 cut(s) 105, 266, 548, 686, 787, 1070
FatI CATG 7 cut(s) 65, 103, 403, 412, 942, 960, 1334
FauI CCCGC 3 cut(s) 718, 938, 1097
Fnu4HI GCNGC 4 cut(s) 533, 858, 1493, 1552
FokI GGATG 2 cut(s) 10, 1124
FriOI GRGCYC 3 cut(s) 158, 487, 1377
Fsp4HI GCNGC 4 cut(s) 533, 858, 1493, 1552
FspBI CTAG 3 cut(s) 339, 495, 1094
GluI GCNGC 4 cut(s) 533, 858, 1493, 1552
GsaI CCCAGC 1 cut(s) 1515
GsuI CTGGAG 1 cut(s) 1323
HaeIII GGCC 5 cut(s) 94, 388, 1151, 1163, 1516
HapII CCGG 1 cut(s) 1223
Hin1II CATG 7 cut(s) 69, 107, 407, 416, 946, 964, 1338
HincII GTYRAC 2 cut(s) 1357, 1486
HindII GTYRAC 2 cut(s) 1357, 1486
HinfI GANTC 9 cut(s) 524, 627, 773, 964, 1027, 1061, 1244, 1459, 1501
HpaI GTTAAC 2 cut(s) 1357, 1486
HpaII CCGG 1 cut(s) 1223
HphI GGTGA 4 cut(s) 36, 304, 409, 1211
Hpy166II GTNNAC 3 cut(s) 715, 1357, 1486
Hpy188I TCNGA 6 cut(s) 160, 457, 635, 811, 1464, 1506
Hpy188III TCNNGA 6 cut(s) 280, 304, 656, 1024, 1039, 1288
Hpy8I GTNNAC 3 cut(s) 715, 1357, 1486
HpyAV CCTTC 9 cut(s) 51, 203, 254, 399, 462, 617, 1462, 1474, 1574
HpyCH4III ACNGT 5 cut(s) 119, 137, 560, 653, 719
HpyCH4IV ACGT 3 cut(s) 666, 711, 1188
HpyF10VI GCNNNNNNNGC 8 cut(s) 153, 435, 457, 491, 796, 896, 1232, 1517
HpyF3I CTNAG 4 cut(s) 6, 456, 1046, 1547
HpySE526I ACGT 3 cut(s) 666, 711, 1188
Hsp92II CATG 7 cut(s) 69, 107, 407, 416, 946, 964, 1338
KspAI GTTAAC 2 cut(s) 1357, 1486
Kzo9I GATC 5 cut(s) 265, 424, 976, 1262, 1472
LguI GCTCTTC 2 cut(s) 61, 1424
LmnI GCTCC 6 cut(s) 18, 76, 161, 490, 843, 1380
Lsp1109I GCAGC 2 cut(s) 544, 1504
LweI GCATC 2 cut(s) 535, 573
MaeI CTAG 3 cut(s) 339, 495, 1094
MaeII ACGT 3 cut(s) 666, 711, 1188
MaeIII GTNAC 2 cut(s) 292, 415
MalI GATC 5 cut(s) 267, 426, 978, 1264, 1474
MboI GATC 5 cut(s) 265, 424, 976, 1262, 1472
MfeI CAATTG 1 cut(s) 677
MflI RGATCY 3 cut(s) 976, 1262, 1472
MhlI GDGCHC 8 cut(s) 15, 73, 158, 487, 717, 826, 1119, 1377
MluCI AATT 7 cut(s) 636, 677, 1015, 1309, 1327, 1542, 1558
MlyI GAGTC 6 cut(s) 533, 767, 958, 1021, 1070, 1238
MmeI TCCRAC 2 cut(s) 750, 789
MseI TTAA 7 cut(s) 114, 639, 735, 914, 1356, 1485, 1557
MslI CAYNNNNRTG 3 cut(s) 581, 597, 710
MspI CCGG 1 cut(s) 1223
MspR9I CCNGG 3 cut(s) 478, 1223, 1302
MunI CAATTG 1 cut(s) 677
Mva1269I GAATGC 1 cut(s) 931
MvaI CCWGG 2 cut(s) 478, 1302
MwoI GCNNNNNNNGC 8 cut(s) 153, 435, 457, 491, 796, 896, 1232, 1517
NciI CCSGG 1 cut(s) 1223
NcoI CCATGG 1 cut(s) 942
NdeII GATC 5 cut(s) 265, 424, 976, 1262, 1472
NlaIII CATG 7 cut(s) 69, 107, 407, 416, 946, 964, 1338
NlaIV GGNNCC 8 cut(s) 157, 474, 486, 674, 839, 1118, 1376, 1474
NmeAIII GCCGAG 1 cut(s) 670
NmuCI GTSAC 2 cut(s) 292, 415
NspI RCATGY 2 cut(s) 107, 407
NspV TTCGAA 1 cut(s) 1457
PciSI GCTCTTC 2 cut(s) 61, 1424
PctI GAATGC 1 cut(s) 931
PfeI GAWTC 3 cut(s) 627, 1459, 1501
PfoI TCCNGGA 1 cut(s) 1300
PkrI GCNGC 4 cut(s) 534, 859, 1494, 1553
PleI GAGTC 6 cut(s) 532, 767, 958, 1021, 1069, 1238
PpsI GAGTC 6 cut(s) 532, 767, 958, 1021, 1069, 1238
PshBI ATTAAT 2 cut(s) 639, 1557
Psp6I CCWGG 2 cut(s) 476, 1300
PspFI CCCAGC 1 cut(s) 1511
PspGI CCWGG 2 cut(s) 476, 1300
PspN4I GGNNCC 8 cut(s) 157, 474, 486, 674, 839, 1118, 1376, 1474
PspPI GGNCC 3 cut(s) 92, 673, 1514
PstNI CAGNNNCTG 1 cut(s) 1082
PsuI RGATCY 3 cut(s) 976, 1262, 1472
RsaI GTAC 2 cut(s) 665, 1126
RsaNI GTAC 2 cut(s) 664, 1125
RseI CAYNNNNRTG 3 cut(s) 581, 597, 710
SapI GCTCTTC 2 cut(s) 61, 1424
SaqAI TTAA 7 cut(s) 114, 639, 735, 914, 1356, 1485, 1557
SatI GCNGC 4 cut(s) 533, 858, 1493, 1552
Sau3AI GATC 5 cut(s) 265, 424, 976, 1262, 1472
Sau96I GGNCC 3 cut(s) 92, 673, 1514
ScaI AGTACT 1 cut(s) 1126
SchI GAGTC 6 cut(s) 533, 767, 958, 1021, 1070, 1238
ScrFI CCNGG 3 cut(s) 478, 1223, 1302
SduI GDGCHC 8 cut(s) 15, 73, 158, 487, 717, 826, 1119, 1377
SfaNI GCATC 2 cut(s) 535, 573
SfuI TTCGAA 1 cut(s) 1457
SinI GGWCC 1 cut(s) 673
SmiMI CAYNNNNRTG 3 cut(s) 581, 597, 710
SmlI CTYRAG 2 cut(s) 49, 1022
SmoI CTYRAG 2 cut(s) 49, 1022
Sse9I AATT 7 cut(s) 636, 677, 1015, 1309, 1327, 1542, 1558
SsiI CCGC 5 cut(s) 725, 858, 931, 1090, 1552
SspI AATATT 1 cut(s) 937
SspMI CTAG 3 cut(s) 339, 495, 1094
StyD4I CCNGG 3 cut(s) 476, 1221, 1300
StyI CCWWGG 2 cut(s) 142, 942
TaaI ACNGT 5 cut(s) 119, 137, 560, 653, 719
TaiI ACGT 3 cut(s) 669, 714, 1191
TaqI TCGA 2 cut(s) 1457, 1562
TasI AATT 7 cut(s) 636, 677, 1015, 1309, 1327, 1542, 1558
TatI WGTACW 1 cut(s) 1124
TauI GCSGC 2 cut(s) 860, 1554
TfiI GAWTC 3 cut(s) 627, 1459, 1501
Tru1I TTAA 7 cut(s) 114, 639, 735, 914, 1356, 1485, 1557
Tru9I TTAA 7 cut(s) 114, 639, 735, 914, 1356, 1485, 1557
TscAI CASTG 3 cut(s) 349, 565, 722
TseFI GTSAC 2 cut(s) 292, 415
TseI GCWGC 2 cut(s) 532, 1492
Tsp45I GTSAC 2 cut(s) 292, 415
TspDTI ATGAA 4 cut(s) 528, 938, 1028, 1191
TspGWI ACGGA 1 cut(s) 536
TspRI CASTG 3 cut(s) 349, 565, 722
VneI GTGCAC 1 cut(s) 713
VpaK11BI GGWCC 1 cut(s) 673
VspI ATTAAT 2 cut(s) 639, 1557
XapI RAATTY 2 cut(s) 1015, 1542
XceI RCATGY 2 cut(s) 107, 407
XspI CTAG 3 cut(s) 339, 495, 1094
ZrmI AGTACT 1 cut(s) 1126
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.