Rh3BG219600

rho GTPase-activating protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
Physical Location & Seq
Reverse (-)
19760017 .. 19765330
5314 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG219600.1

Sequence Viewer

Length: 1518 bp
ATGACTGAGGTACTCCAATCCCCATCTCACTTCCCTTCACCTTCAAGCTCTTCCCCACCCACAAGTAATGATGGCCCATACCCACATGCCCTTATTACCAGTCCTTCCGTAGGTGAGAGCCTGCAAGCCCATTTGAGTTCAGAGGAGGAGGAACAAGAAGAAGAAGAGAGGAAGAGGAGCGAGAGAGACAGAGAGGGAGATCAGCTGTCGCTCTTGACGCTTCTTGTGGCTGCTTTTAGGAAATCTTTGATTGGGTGCAGTACTACTGGGACTGGGGCCGAGAGAGCTAAGCTTTCCAACATGGAGATTGGGTGGCCTTCCAATGTGAGGCATGTTGCCCATGTCACCTTTGATCGGTTCAATGGCTTTCTGGGTTTGCCGGTTGAGCTTGAGCCTGAGGTTCCCAGGAGAGCTCCTAGTGCTAGTGCAAATGTTTTCGGGGTTTCCACAGAGTCCATGCAGCTATCATTTGATGCTAGAGGAAACAGTGTCCCCACAATACTCATCTTGATGCAGAGACATTTATATGCGCAGGGGGGTCTGCAGGCAGAAGGAATCTTCAGAATTAATGGCGAGAACAGTCAGGAAGAGTATGTCAGGGACCAATTAAACAAGGGAATAATACCAGAGGGTGTTGACATGCACTGTTTAGCAGGTCTTATTAAGGCTTGGTTTAGAGAACTCCCAACTGCTGTATTGGACTCTCTCTCACCAGAGCAGGTAATGCAGTCGCAGACAGAAGAGGAGTGTGCTCAACTTGTTAGGCTTCTTCCGCCAACAGAAGCTGCATTATTGGATTGGGCAGTAAACCTAATGGCTGATGTTGCACAGATGGAACACCTGAACAAGATGAATGCACGCAACATTGCCATGGTCTTTGCACCAAACATGACTCAAATGGTAGATCCTTTGACTGCATTGATGTATGCAGTCCAAGTGATGAATTTCCTCAAGACTCTTATAGTCAAGACACTAAGAGAGAGAGAAGAGTCTATGGTGGAAACAGCTCCTGTCCCACGCCTTGAGCCTTCTGATGAGGATGAGCACCAAAGCACTTTTCAACCATATCTCGAAGAGACTAATAAGGAGGCTAACAAGGAAAATGAAGAGGAGAATGTATTTGTTGCCGAAGAACCGGCTTTACAGAGCCCCCCTCGCACTTTACAAGATGAACCTAGTCAACCTACAGCTGAAAGTGGATCCCAGAATTTCCTCTCTTCTATCAAATATATGATCCCCGGAGGAAATTGGTCTGTAGTTGATAATTGTCCTTGTGAGGTTGTATCCCAAGTCAGCTCTTTAACAAATGGGCTCCAAGAGGATGGCATAACAGGTCAGGGTAGAGAGGCTCAGACAAACGTTTGGAAGAGTCAACCAAGCGTTTCAAATCTGAAGAAGGGATCAAAGGTCACTGAGCAGCTAATGGTTCAAATTGTCGGGCCTGGAGACAAGAGCAAGAGAACTGGGATTCTTAGCCGCATAAATTCGAGGACAGATATCGCTGAAGGTTGGCGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

505

Amino Acids

55.78

Weight (kDa)

4.79

Isoelectric Point (pI)

63.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RhoGAP PF00620 165 - 298 1.6e-22 RhoGAP domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0011795)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 531
Acc36I ACCTGC 2 cut(s) 644, 709
AciI CCGC 2 cut(s) 773, 1477
AclI AACGTT 1 cut(s) 1359
AclWI GGATC 5 cut(s) 899, 1194, 1207, 1228, 1408
AcsI RAATTY 3 cut(s) 943, 1207, 1483
AcuI CTGAAG 2 cut(s) 544, 1412
AfaI GTAC 2 cut(s) 12, 262
AfiI CCNNNNNNNGG 3 cut(s) 110, 327, 354
AgsI TTSAA 5 cut(s) 45, 361, 1061, 1386, 1430
AjnI CCWGG 2 cut(s) 404, 1441
AjuI GAANNNNNNNTTGG 2 cut(s) 1041, 1073
Alw21I GWGCWC 3 cut(s) 415, 754, 1047
Alw26I GTCTC 4 cut(s) 180, 511, 1070, 1440
AlwI GGATC 5 cut(s) 899, 1194, 1207, 1228, 1408
AlwNI CAGNNNCTG 2 cut(s) 785, 1010
AoxI GGCC 4 cut(s) 73, 276, 314, 1439
ApeKI GCWGC 4 cut(s) 230, 460, 785, 1417
ApoI RAATTY 3 cut(s) 943, 1207, 1483
AseI ATTAAT 1 cut(s) 567
AspLEI GCGC 1 cut(s) 532
AspS9I GGNCC 4 cut(s) 74, 276, 601, 1439
AsuC2I CCSGG 1 cut(s) 1239
AsuHPI GGTGA 4 cut(s) 30, 125, 337, 702
AvaII GGWCC 1 cut(s) 601
AxyI CCTNAGG 1 cut(s) 396
BamHI GGATCC 1 cut(s) 1199
BanII GRGCYC 3 cut(s) 415, 1151, 1314
Bbv12I GWGCWC 3 cut(s) 415, 754, 1047
BbvI GCAGC 4 cut(s) 217, 472, 772, 1429
BccI CCATC 4 cut(s) 31, 65, 826, 1316
BciT130I CCWGG 2 cut(s) 406, 1443
BciVI GTATCC 1 cut(s) 1294
BcnI CCSGG 1 cut(s) 1239
BcoDI GTCTC 4 cut(s) 180, 511, 1070, 1440
BfaI CTAG 4 cut(s) 417, 423, 477, 1176
BfmI CTRYAG 3 cut(s) 542, 1185, 1254
BfuAI ACCTGC 2 cut(s) 644, 709
BfuI GTATCC 1 cut(s) 1294
BisI GCNGC 5 cut(s) 231, 461, 786, 1418, 1477
BlpI GCTNAGC 1 cut(s) 288
BlsI GCNGC 5 cut(s) 232, 462, 787, 1419, 1478
BmcAI AGTACT 1 cut(s) 262
Bme1390I CCNGG 3 cut(s) 406, 1239, 1443
Bme18I GGWCC 1 cut(s) 601
BmgT120I GGNCC 4 cut(s) 74, 276, 601, 1439
BmiI GGNNCC 5 cut(s) 277, 402, 602, 1201, 1313
BmrFI CCNGG 3 cut(s) 406, 1239, 1443
BmrI ACTGGG 3 cut(s) 276, 282, 1473
BmsI GCATC 2 cut(s) 463, 501
BmuI ACTGGG 3 cut(s) 276, 282, 1473
BplI GAGNNNNNCTC 2 cut(s) 1138, 1170
BpmI CTGGAG 1 cut(s) 1464
Bpu1102I GCTNAGC 1 cut(s) 288
BpuEI CTTGAG 3 cut(s) 410, 935, 1043
BpuMI CCSGG 1 cut(s) 1239
BsaJI CCNNGG 3 cut(s) 404, 870, 1237
BsaXI ACNNNNNCTCC 2 cut(s) 296, 326
Bsc4I CCNNNNNNNGG 3 cut(s) 110, 327, 354
Bse118I RCCGGY 2 cut(s) 379, 1135
Bse1I ACTGG 4 cut(s) 99, 271, 277, 1468
Bse21I CCTNAGG 1 cut(s) 396
Bse3DI GCAATG 1 cut(s) 864
BseBI CCWGG 2 cut(s) 406, 1443
BseDI CCNNGG 3 cut(s) 404, 870, 1237
BseGI GGATG 2 cut(s) 1045, 1327
BseLI CCNNNNNNNGG 3 cut(s) 110, 327, 354
BseMI GCAATG 1 cut(s) 864
BseMII CTCAG 3 cut(s) 387, 1364, 1404
BseNI ACTGG 4 cut(s) 99, 271, 277, 1468
BseRI GAGGAG 5 cut(s) 158, 161, 190, 758, 1124
BseXI GCAGC 4 cut(s) 217, 472, 772, 1429
BsgI GTGCAG 1 cut(s) 277
BshFI GGCC 4 cut(s) 75, 278, 316, 1441
BsiHKAI GWGCWC 3 cut(s) 415, 754, 1047
BsiSI CCGG 3 cut(s) 380, 1136, 1239
BslFI GGGAC 4 cut(s) 283, 476, 614, 998
BslI CCNNNNNNNGG 3 cut(s) 110, 327, 354
BsmAI GTCTC 4 cut(s) 180, 511, 1070, 1440
BsmFI GGGAC 4 cut(s) 283, 476, 614, 998
BsmI GAATGC 1 cut(s) 859
BsnI GGCC 4 cut(s) 75, 278, 316, 1441
Bsp1286I GDGCHC 5 cut(s) 415, 754, 1047, 1151, 1314
Bsp143I GATC 6 cut(s) 199, 352, 904, 1199, 1233, 1400
Bsp1720I GCTNAGC 1 cut(s) 288
Bsp19I CCATGG 1 cut(s) 870
BspACI CCGC 2 cut(s) 773, 1477
BspANI GGCC 4 cut(s) 75, 278, 316, 1441
BspCNI CTCAG 3 cut(s) 388, 1363, 1405
BspLI GGNNCC 5 cut(s) 277, 402, 602, 1201, 1313
BspMAI CTGCAG 1 cut(s) 546
BspMI ACCTGC 2 cut(s) 644, 709
BspPI GGATC 5 cut(s) 899, 1194, 1207, 1228, 1408
BspQI GCTCTTC 1 cut(s) 55
BsrDI GCAATG 1 cut(s) 864
BsrFI RCCGGY 2 cut(s) 379, 1135
BsrI ACTGG 4 cut(s) 99, 271, 277, 1468
BssAI RCCGGY 2 cut(s) 379, 1135
BssECI CCNNGG 3 cut(s) 404, 870, 1237
BssMI GATC 6 cut(s) 199, 352, 904, 1199, 1233, 1400
BssT1I CCWWGG 1 cut(s) 870
Bst2UI CCWGG 2 cut(s) 406, 1443
Bst4CI ACNGT 3 cut(s) 488, 581, 647
BstAPI GCANNNNNTGC 1 cut(s) 724
BstC8I GCNNGC 4 cut(s) 122, 126, 546, 859
BstDEI CTNAG 7 cut(s) 6, 288, 396, 974, 1350, 1413, 1472
BstDSI CCRYGG 1 cut(s) 870
BstENI CCTNNNNNAGG 1 cut(s) 108
BstF5I GGATG 2 cut(s) 1045, 1327
BstHHI GCGC 1 cut(s) 532
BstKTI GATC 6 cut(s) 202, 355, 907, 1202, 1236, 1403
BstMAI GTCTC 4 cut(s) 180, 511, 1070, 1440
BstMBI GATC 6 cut(s) 199, 352, 904, 1199, 1233, 1400
BstMWI GCNNNNNNNGC 8 cut(s) 217, 284, 385, 419, 724, 772, 824, 1155
BstNI CCWGG 2 cut(s) 406, 1443
BstNSI RCATGY 3 cut(s) 89, 335, 643
BstSCI CCNGG 3 cut(s) 404, 1237, 1441
BstSFI CTRYAG 3 cut(s) 542, 1185, 1254
BstV1I GCAGC 4 cut(s) 217, 472, 772, 1429
BstX2I RGATCY 2 cut(s) 904, 1199
BstXI CCANNNNNNTGG 1 cut(s) 1322
BstYI RGATCY 2 cut(s) 904, 1199
Bsu36I CCTNAGG 1 cut(s) 396
BsuI GTATCC 1 cut(s) 1294
BsuRI GGCC 4 cut(s) 75, 278, 316, 1441
BtgI CCRYGG 1 cut(s) 870
BtsCI GGATG 2 cut(s) 1045, 1327
BtsIMutI CAGTG 3 cut(s) 493, 643, 1410
BveI ACCTGC 2 cut(s) 644, 709
Cac8I GCNNGC 4 cut(s) 122, 126, 546, 859
CaiI CAGNNNCTG 2 cut(s) 785, 1010
CfoI GCGC 1 cut(s) 532
Cfr10I RCCGGY 2 cut(s) 379, 1135
Cfr13I GGNCC 4 cut(s) 74, 276, 601, 1439
CseI GACGC 1 cut(s) 226
Csp6I GTAC 2 cut(s) 11, 261
CviAII CATG 8 cut(s) 86, 301, 332, 341, 457, 640, 871, 889
CviQI GTAC 2 cut(s) 11, 261
DdeI CTNAG 7 cut(s) 6, 288, 396, 974, 1350, 1413, 1472
DpnI GATC 6 cut(s) 201, 354, 906, 1201, 1235, 1402
DpnII GATC 6 cut(s) 199, 352, 904, 1199, 1233, 1400
EciI GGCGGA 1 cut(s) 762
Ecl136II GAGCTC 1 cut(s) 413
Eco130I CCWWGG 1 cut(s) 870
Eco24I GRGCYC 3 cut(s) 415, 1151, 1314
Eco32I GATATC 1 cut(s) 1498
Eco47I GGWCC 1 cut(s) 601
Eco53kI GAGCTC 1 cut(s) 413
Eco57I CTGAAG 2 cut(s) 544, 1412
Eco81I CCTNAGG 1 cut(s) 396
EcoICRI GAGCTC 1 cut(s) 413
EcoNI CCTNNNNNAGG 1 cut(s) 108
EcoRII CCWGG 2 cut(s) 404, 1441
EcoRV GATATC 1 cut(s) 1498
EcoT14I CCWWGG 1 cut(s) 870
EcoT38I GRGCYC 3 cut(s) 415, 1151, 1314
ErhI CCWWGG 1 cut(s) 870
FaeI CATG 8 cut(s) 89, 304, 335, 344, 460, 643, 874, 892
FaqI GGGAC 4 cut(s) 283, 476, 614, 998
FatI CATG 8 cut(s) 85, 300, 331, 340, 456, 639, 870, 888
Fnu4HI GCNGC 5 cut(s) 231, 461, 786, 1418, 1477
FokI GGATG 2 cut(s) 1052, 1334
FriOI GRGCYC 3 cut(s) 415, 1151, 1314
Fsp4HI GCNGC 5 cut(s) 231, 461, 786, 1418, 1477
FspBI CTAG 4 cut(s) 417, 423, 477, 1176
FspI TGCGCA 1 cut(s) 531
GlaI GCGC 1 cut(s) 531
GluI GCNGC 5 cut(s) 231, 461, 786, 1418, 1477
GsuI CTGGAG 1 cut(s) 1464
HaeIII GGCC 4 cut(s) 75, 278, 316, 1441
HapII CCGG 3 cut(s) 380, 1136, 1239
HgaI GACGC 1 cut(s) 226
HhaI GCGC 1 cut(s) 532
Hin1II CATG 8 cut(s) 89, 304, 335, 344, 460, 643, 874, 892
Hin6I GCGC 1 cut(s) 530
HinP1I GCGC 1 cut(s) 530
HincII GTYRAC 3 cut(s) 637, 1181, 1373
HindII GTYRAC 3 cut(s) 637, 1181, 1373
HindIII AAGCTT 1 cut(s) 290
HinfI GANTC 8 cut(s) 452, 555, 701, 892, 955, 989, 1369, 1468
HpaII CCGG 3 cut(s) 380, 1136, 1239
HphI GGTGA 4 cut(s) 30, 125, 337, 702
Hpy166II GTNNAC 4 cut(s) 637, 808, 1181, 1373
Hpy188I TCNGA 5 cut(s) 142, 563, 1033, 1353, 1392
Hpy188III TCNNGA 6 cut(s) 214, 508, 584, 952, 967, 1070
Hpy8I GTNNAC 4 cut(s) 637, 808, 1181, 1373
HpyAV CCTTC 8 cut(s) 45, 51, 114, 327, 545, 1038, 1390, 1499
HpyCH4III ACNGT 3 cut(s) 488, 581, 647
HpyCH4IV ACGT 1 cut(s) 1359
HpyF10VI GCNNNNNNNGC 8 cut(s) 217, 284, 385, 419, 724, 772, 824, 1155
HpyF3I CTNAG 7 cut(s) 6, 288, 396, 974, 1350, 1413, 1472
HpySE526I ACGT 1 cut(s) 1359
Hsp92II CATG 8 cut(s) 89, 304, 335, 344, 460, 643, 874, 892
HspAI GCGC 1 cut(s) 530
Kzo9I GATC 6 cut(s) 199, 352, 904, 1199, 1233, 1400
LguI GCTCTTC 1 cut(s) 55
LmnI GCTCC 4 cut(s) 177, 418, 1012, 1317
Lsp1109I GCAGC 4 cut(s) 217, 472, 772, 1429
LweI GCATC 2 cut(s) 463, 501
MaeI CTAG 4 cut(s) 417, 423, 477, 1176
MaeII ACGT 1 cut(s) 1359
MaeIII GTNAC 2 cut(s) 343, 1408
MalI GATC 6 cut(s) 201, 354, 906, 1201, 1235, 1402
MboI GATC 6 cut(s) 199, 352, 904, 1199, 1233, 1400
MflI RGATCY 2 cut(s) 904, 1199
MhlI GDGCHC 5 cut(s) 415, 754, 1047, 1151, 1314
MluCI AATT 8 cut(s) 564, 605, 943, 1207, 1246, 1264, 1431, 1483
MlyI GAGTC 6 cut(s) 461, 695, 886, 949, 998, 1378
MmeI TCCRAC 1 cut(s) 321
MseI TTAA 4 cut(s) 567, 608, 663, 1301
MslI CAYNNNNRTG 3 cut(s) 509, 525, 869
MspA1I CMGCKG 2 cut(s) 205, 1190
MspI CCGG 3 cut(s) 380, 1136, 1239
MspR9I CCNGG 3 cut(s) 406, 1239, 1443
Mva1269I GAATGC 1 cut(s) 859
MvaI CCWGG 2 cut(s) 406, 1443
MwoI GCNNNNNNNGC 8 cut(s) 217, 284, 385, 419, 724, 772, 824, 1155
NciI CCSGG 1 cut(s) 1239
NcoI CCATGG 1 cut(s) 870
NdeII GATC 6 cut(s) 199, 352, 904, 1199, 1233, 1400
NlaIII CATG 8 cut(s) 89, 304, 335, 344, 460, 643, 874, 892
NlaIV GGNNCC 5 cut(s) 277, 402, 602, 1201, 1313
NmeAIII GCCGAG 1 cut(s) 304
NmuCI GTSAC 2 cut(s) 343, 1408
NsbI TGCGCA 1 cut(s) 531
NspI RCATGY 3 cut(s) 89, 335, 643
PciSI GCTCTTC 1 cut(s) 55
PctI GAATGC 1 cut(s) 859
PfeI GAWTC 2 cut(s) 555, 1468
PkrI GCNGC 5 cut(s) 232, 462, 787, 1419, 1478
PleI GAGTC 6 cut(s) 460, 695, 886, 949, 997, 1377
PpsI GAGTC 6 cut(s) 460, 695, 886, 949, 997, 1377
PshBI ATTAAT 1 cut(s) 567
Psp124BI GAGCTC 1 cut(s) 415
Psp1406I AACGTT 1 cut(s) 1359
Psp6I CCWGG 2 cut(s) 404, 1441
PspGI CCWGG 2 cut(s) 404, 1441
PspN4I GGNNCC 5 cut(s) 277, 402, 602, 1201, 1313
PspPI GGNCC 4 cut(s) 74, 276, 601, 1439
PsrI GAACNNNNNNTAC 2 cut(s) 1125, 1157
PstI CTGCAG 1 cut(s) 546
PstNI CAGNNNCTG 2 cut(s) 785, 1010
PsuI RGATCY 2 cut(s) 904, 1199
PvuII CAGCTG 2 cut(s) 205, 1190
RsaI GTAC 2 cut(s) 12, 262
RsaNI GTAC 2 cut(s) 11, 261
RseI CAYNNNNRTG 3 cut(s) 509, 525, 869
SacI GAGCTC 1 cut(s) 415
SapI GCTCTTC 1 cut(s) 55
SaqAI TTAA 4 cut(s) 567, 608, 663, 1301
SatI GCNGC 5 cut(s) 231, 461, 786, 1418, 1477
Sau3AI GATC 6 cut(s) 199, 352, 904, 1199, 1233, 1400
Sau96I GGNCC 4 cut(s) 74, 276, 601, 1439
ScaI AGTACT 1 cut(s) 262
SchI GAGTC 6 cut(s) 461, 695, 886, 949, 998, 1378
ScrFI CCNGG 3 cut(s) 406, 1239, 1443
SduI GDGCHC 5 cut(s) 415, 754, 1047, 1151, 1314
SfaNI GCATC 2 cut(s) 463, 501
SfcI CTRYAG 3 cut(s) 542, 1185, 1254
SinI GGWCC 1 cut(s) 601
SmiMI CAYNNNNRTG 3 cut(s) 509, 525, 869
SmlI CTYRAG 3 cut(s) 389, 950, 1022
SmoI CTYRAG 3 cut(s) 389, 950, 1022
Sse9I AATT 8 cut(s) 564, 605, 943, 1207, 1246, 1264, 1431, 1483
SsiI CCGC 2 cut(s) 773, 1477
SspMI CTAG 4 cut(s) 417, 423, 477, 1176
SstI GAGCTC 1 cut(s) 415
StyD4I CCNGG 3 cut(s) 404, 1237, 1441
StyI CCWWGG 1 cut(s) 870
TaaI ACNGT 3 cut(s) 488, 581, 647
TaiI ACGT 1 cut(s) 1362
TaqI TCGA 2 cut(s) 1071, 1487
TasI AATT 8 cut(s) 564, 605, 943, 1207, 1246, 1264, 1431, 1483
TatI WGTACW 1 cut(s) 260
TauI GCSGC 1 cut(s) 1479
TfiI GAWTC 2 cut(s) 555, 1468
Tru1I TTAA 4 cut(s) 567, 608, 663, 1301
Tru9I TTAA 4 cut(s) 567, 608, 663, 1301
TscAI CASTG 3 cut(s) 493, 650, 1417
TseFI GTSAC 2 cut(s) 343, 1408
TseI GCWGC 4 cut(s) 230, 460, 785, 1417
Tsp45I GTSAC 2 cut(s) 343, 1408
TspDTI ATGAA 4 cut(s) 866, 956, 1119, 1185
TspGWI ACGGA 1 cut(s) 97
TspRI CASTG 3 cut(s) 493, 650, 1417
VpaK11BI GGWCC 1 cut(s) 601
VspI ATTAAT 1 cut(s) 567
XagI CCTNNNNNAGG 1 cut(s) 108
XapI RAATTY 3 cut(s) 943, 1207, 1483
XceI RCATGY 3 cut(s) 89, 335, 643
XspI CTAG 4 cut(s) 417, 423, 477, 1176
ZrmI AGTACT 1 cut(s) 262
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.