Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr14

Orthogroup ID

OG0004976

Physical Location & Seq

Genomic Coordinates Forward (+)

6790971 .. 6796385

Gene Structure 5415 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD14G1064200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1074 bp

ATGGACCCAACCGGAGCAACCGTACCCGGATCCACTTTACCGGGACCCGAGCTCGAGTCCCTCCAATTCCGGGAAGAAATTCACCAACTCATGACCGTGCCGCCCGAGAACGCCAGCTCCTTCACCGCGCTTCTAGAACTTCCGCCGACCCAAGCCATGGAGCTCCTCCACCTCTCGCCGGAACCCGACTGTGCTCCGCCGCTGGCCGGCGTCTCCGCCGACCCCCAACACGCGCCCTACGTCCAGCAGCCCCCTTTCAATTCCAGCCTAATTTTCCCTACCAATTCCGCTCTAACCGAACGCACCGCCAAGTTCTCGATCTTCGCCGGCAATGGCTCGCCGGACATTAGCTCCGTGCCGTCGAACTCCGGAGCCGAATTGGAGAAGGTGAAGACCGAGCCGGCCGAGACCGATTCGAACCCTAACTCGTCGCAGCTGACGCTCGACGAGACCAGGAACAACCAGAGGAACTCGGCGAAGAGAAAGGAGCGAGAGAAGAAGGTCAAGGCCCCGACGAAGAAGTGCAAGACCGAAATCAAAGAGGACGCCGAGAAGATGCCGTACGTTCATGTCCGAGCTCGTCGCGGTCAAGCCACGGACAGCCATAGCTTAGCAGAGCGAGCTAGGAGAGAGAAGATTAATGCGAGGATGAAGTTGCTGCAGGAGCTGGTCCCAGGATGCAATAAGATTTCAGGAAAAGCATTGGTTCTAGACGAAATCATCAATCATGTGCAGTCCCTACAACATCAAGTTGAGTTCTTATCAATGAGACTTGCAGCAGTCAACCCAGGAATTGATTTCAACCTTGATAGTATATTGGCTGCTGAAAGTGGACCTCTGATGGAAAGTAACTTCGCCAGTATGGTTACACCTCTGATGTGGCCGGAAGTCTCAATCAACGCACACAGACAACCGTATCAACAGCAATGGCACTTTGACGCGCTTCAGCAGCCAGGTTGGGGGCGGGAAGAAGAAAATCATACTTTCATTGCCCCAGAACCCCCCCTCATCAGTTGCGACTCTTCAGCAAACTCAGAAAATCTGCAGACCAGTCACTTGAAGAAGGAAATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HLH

Protein Analysis

358

Amino Acids

39.45

Weight (kDa)

5.53

Isoelectric Point (pI)

55.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HLH	PF00010	201 - 248	3.3e-07	Helix-loop-helix DNA-binding domain
bHLH_SAC51	PF23173	206 - 250	4.6e-06	Transcription factor SAC51 bHLH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004976)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G42300 AT2G42300 AT2G42300 AT2G42300 AT2G42300 AT3G57800 AT3G57800
fragaria_vesca	FvH4_6g22930 FvH4_6g22930 FvH4_6g22930 FvH4_6g22930 FvH4_6g22930
malus_domestica	MD12G1063900.v1.1 MD12G1064000.v1.1 MD14G1064200.v1.1
prunus_persica	Prupe.7G070200_v2.0.a1
pyrus_communis	pycom12g05580 pycom14g05190
rosa_chinensis	RchiOBHm_Chr3g0480751
rosa_laevigata	RLG00000023457
rosa_multiflora	Rmu_sc0003902.1_g000017
rosa_roxburghii	Rroxscaffold_6G00401100
rosa_rugosa	Rorug03G0185300 Rorug03G0185300
rosa_samantha	Rh3AG237400 Rh3BG270900 Rh3CG267000 Rh3CG267100 Rh3DG263000
rosa_wichuraiana	Rw3G021270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	157
AccBSI	CCGCTC	1 cut(s)	290
AccII	CGCG	4 cut(s)	128, 233, 585, 941
AccIII	TCCGGA	1 cut(s)	368
AclWI	GGATC	2 cut(s)	24, 37
AcoI	YGGCCR	3 cut(s)	204, 402, 881
AcsI	RAATTY	1 cut(s)	78
AcuI	CTGAAG	2 cut(s)	929, 1008
AcyI	GRCGYC	2 cut(s)	210, 546
AfaI	GTAC	2 cut(s)	24, 563
AfiI	CCNNNNNNNGG	5 cut(s)	70, 157, 178, 206, 959
AgsI	TTSAA	3 cut(s)	259, 802, 1060
AjnI	CCWGG	4 cut(s)	452, 673, 787, 952
AloI	GAACNNNNNNTCC	2 cut(s)	101, 133
AluBI	AGCT	9 cut(s)	52, 117, 163, 351, 436, 578, 609, 623, 667
AluI	AGCT	9 cut(s)	52, 117, 163, 351, 436, 578, 609, 623, 667
Alw21I	GWGCWC	4 cut(s)	54, 165, 196, 580
Alw26I	GTCTC	5 cut(s)	217, 401, 443, 763, 895
AlwI	GGATC	2 cut(s)	24, 37
AlwNI	CAGNNNCTG	1 cut(s)	667
Ama87I	CYCGRG	3 cut(s)	47, 53, 104
Aor13HI	TCCGGA	1 cut(s)	368
AoxI	GGCC	4 cut(s)	204, 402, 507, 881
ApeKI	GCWGC	6 cut(s)	247, 433, 658, 776, 821, 949
ApoI	RAATTY	1 cut(s)	78
AseI	ATTAAT	1 cut(s)	639
Asp700I	GAANNNNTTC	1 cut(s)	78
AspLEI	GCGC	3 cut(s)	130, 235, 943
AspS9I	GGNCC	5 cut(s)	4, 44, 508, 670, 833
AsuC2I	CCSGG	3 cut(s)	27, 42, 71
AsuHPI	GGTGA	3 cut(s)	74, 115, 400
AsuII	TTCGAA	1 cut(s)	416
AvaI	CYCGRG	3 cut(s)	47, 53, 104
AvaII	GGWCC	4 cut(s)	4, 44, 670, 833
BaeI	ACNNNNGTAYC	2 cut(s)	899, 932
BamHI	GGATCC	1 cut(s)	29
BanII	GRGCYC	3 cut(s)	54, 165, 580
BarI	GAAGNNNNNNTAC	2 cut(s)	545, 577
BbsI	GAAGAC	1 cut(s)	398
Bbv12I	GWGCWC	4 cut(s)	54, 165, 196, 580
BbvI	GCAGC	6 cut(s)	259, 445, 645, 788, 808, 961
BccI	CCATC	1 cut(s)	835
BceAI	ACGGC	2 cut(s)	343, 544
BciT130I	CCWGG	4 cut(s)	454, 675, 789, 954
BcnI	CCSGG	3 cut(s)	27, 42, 71
BcoDI	GTCTC	5 cut(s)	217, 401, 443, 763, 895
BfaI	CTAG	3 cut(s)	134, 624, 710
BfmI	CTRYAG	2 cut(s)	659, 1043
BisI	GCNGC	8 cut(s)	101, 200, 248, 434, 659, 777, 822, 950
BlpI	GCTNAGC	1 cut(s)	610
BlsI	GCNGC	8 cut(s)	102, 201, 249, 435, 660, 778, 823, 951
Bme1390I	CCNGG	7 cut(s)	27, 42, 71, 454, 675, 789, 954
Bme18I	GGWCC	4 cut(s)	4, 44, 670, 833
BmeT110I	CYCGRG	3 cut(s)	47, 53, 104
BmgT120I	GGNCC	5 cut(s)	4, 44, 508, 670, 833
BmiI	GGNNCC	8 cut(s)	6, 31, 45, 46, 183, 373, 510, 672
BmrFI	CCNGG	7 cut(s)	27, 42, 71, 454, 675, 789, 954
BmsI	GCATC	2 cut(s)	546, 668
BpiI	GAAGAC	1 cut(s)	398
Bpu1102I	GCTNAGC	1 cut(s)	610
Bpu14I	TTCGAA	1 cut(s)	416
BpuMI	CCSGG	3 cut(s)	27, 42, 71
BsaHI	GRCGYC	2 cut(s)	210, 546
BsaI	GGTCTC	2 cut(s)	401, 443
BsaJI	CCNNGG	4 cut(s)	156, 594, 673, 787
BsaWI	WCCGGW	2 cut(s)	11, 368
BsaXI	ACNNNNNCTCC	6 cut(s)	6, 36, 101, 131, 335, 365
Bsc4I	CCNNNNNNNGG	5 cut(s)	70, 157, 178, 206, 959
Bse118I	RCCGGY	3 cut(s)	206, 326, 400
Bse1I	ACTGG	2 cut(s)	858, 1050
Bse3DI	GCAATG	3 cut(s)	337, 932, 987
BseAI	TCCGGA	1 cut(s)	368
BseBI	CCWGG	4 cut(s)	454, 675, 789, 954
BseDI	CCNNGG	4 cut(s)	156, 594, 673, 787
BseGI	GGATG	2 cut(s)	654, 683
BseLI	CCNNNNNNNGG	5 cut(s)	70, 157, 178, 206, 959
BseMI	GCAATG	3 cut(s)	337, 932, 987
BseMII	CTCAG	1 cut(s)	1047
BseNI	ACTGG	2 cut(s)	858, 1050
BseRI	GAGGAG	1 cut(s)	155
BseX3I	CGGCCG	1 cut(s)	402
BseXI	GCAGC	6 cut(s)	259, 445, 645, 788, 808, 961
BsgI	GTGCAG	1 cut(s)	752
Bsh1236I	CGCG	4 cut(s)	128, 233, 585, 941
Bsh1285I	CGRYCG	1 cut(s)	405
BshFI	GGCC	4 cut(s)	206, 404, 509, 883
BsiEI	CGRYCG	1 cut(s)	405
BsiHKAI	GWGCWC	4 cut(s)	54, 165, 196, 580
BsiHKCI	CYCGRG	3 cut(s)	47, 53, 104
BsiWI	CGTACG	1 cut(s)	561
BslFI	GGGAC	4 cut(s)	43, 57, 656, 721
BslI	CCNNNNNNNGG	5 cut(s)	70, 157, 178, 206, 959
BsmAI	GTCTC	5 cut(s)	217, 401, 443, 763, 895
BsmBI	CGTCTC	1 cut(s)	217
BsmFI	GGGAC	4 cut(s)	43, 57, 656, 721
BsnI	GGCC	4 cut(s)	206, 404, 509, 883
Bso31I	GGTCTC	2 cut(s)	401, 443
BsoBI	CYCGRG	3 cut(s)	47, 53, 104
Bsp119I	TTCGAA	1 cut(s)	416
Bsp1286I	GDGCHC	4 cut(s)	54, 165, 196, 580
Bsp13I	TCCGGA	1 cut(s)	368
Bsp143I	GATC	2 cut(s)	29, 318
Bsp1720I	GCTNAGC	1 cut(s)	610
Bsp19I	CCATGG	1 cut(s)	156
BspANI	GGCC	4 cut(s)	206, 404, 509, 883
BspCNI	CTCAG	1 cut(s)	1046
BspEI	TCCGGA	1 cut(s)	368
BspFNI	CGCG	4 cut(s)	128, 233, 585, 941
BspHI	TCATGA	1 cut(s)	90
BspLI	GGNNCC	8 cut(s)	6, 31, 45, 46, 183, 373, 510, 672
BspMAI	CTGCAG	2 cut(s)	663, 1047
BspPI	GGATC	2 cut(s)	24, 37
BspT104I	TTCGAA	1 cut(s)	416
BspTNI	GGTCTC	2 cut(s)	401, 443
BsrBI	CCGCTC	1 cut(s)	290
BsrDI	GCAATG	3 cut(s)	337, 932, 987
BsrFI	RCCGGY	3 cut(s)	206, 326, 400
BsrI	ACTGG	2 cut(s)	858, 1050
BssAI	RCCGGY	3 cut(s)	206, 326, 400
BssECI	CCNNGG	4 cut(s)	156, 594, 673, 787
BssMI	GATC	2 cut(s)	29, 318
BssNI	GRCGYC	2 cut(s)	210, 546
BssT1I	CCWWGG	1 cut(s)	156
Bst2UI	CCWGG	4 cut(s)	454, 675, 789, 954
Bst4CI	ACNGT	4 cut(s)	22, 97, 191, 915
Bst6I	CTCTTC	2 cut(s)	473, 1027
BstACI	GRCGYC	2 cut(s)	210, 546
BstBI	TTCGAA	1 cut(s)	416
BstC8I	GCNNGC	7 cut(s)	115, 204, 208, 328, 338, 402, 621
BstDEI	CTNAG	2 cut(s)	610, 1033
BstDSI	CCRYGG	2 cut(s)	156, 594
BstF5I	GGATG	2 cut(s)	654, 683
BstFNI	CGCG	4 cut(s)	128, 233, 585, 941
BstHHI	GCGC	3 cut(s)	130, 235, 943
BstKTI	GATC	2 cut(s)	32, 321
BstMAI	GTCTC	5 cut(s)	217, 401, 443, 763, 895
BstMBI	GATC	2 cut(s)	29, 318
BstMCI	CGRYCG	1 cut(s)	405
BstMWI	GCNNNNNNNGC	4 cut(s)	439, 620, 664, 949
BstNI	CCWGG	4 cut(s)	454, 675, 789, 954
BstSCI	CCNGG	7 cut(s)	25, 40, 69, 452, 673, 787, 952
BstSFI	CTRYAG	2 cut(s)	659, 1043
BstUI	CGCG	4 cut(s)	128, 233, 585, 941
BstV1I	GCAGC	6 cut(s)	259, 445, 645, 788, 808, 961
BstV2I	GAAGAC	1 cut(s)	398
BstX2I	RGATCY	1 cut(s)	29
BstYI	RGATCY	1 cut(s)	29
BstZI	CGGCCG	1 cut(s)	402
BsuRI	GGCC	4 cut(s)	206, 404, 509, 883
BtgI	CCRYGG	2 cut(s)	156, 594
BtsCI	GGATG	2 cut(s)	654, 683
Cac8I	GCNNGC	7 cut(s)	115, 204, 208, 328, 338, 402, 621
CaiI	CAGNNNCTG	1 cut(s)	667
CciI	TCATGA	1 cut(s)	90
CfoI	GCGC	3 cut(s)	130, 235, 943
Cfr10I	RCCGGY	3 cut(s)	206, 326, 400
Cfr13I	GGNCC	5 cut(s)	4, 44, 508, 670, 833
CseI	GACGC	4 cut(s)	199, 448, 554, 947
Csp6I	GTAC	2 cut(s)	23, 562
CviAII	CATG	4 cut(s)	91, 157, 569, 728
CviQI	GTAC	2 cut(s)	23, 562
DdeI	CTNAG	2 cut(s)	610, 1033
DpnI	GATC	2 cut(s)	31, 320
DpnII	GATC	2 cut(s)	29, 318
EaeI	YGGCCR	3 cut(s)	204, 402, 881
EagI	CGGCCG	1 cut(s)	402
Eam1104I	CTCTTC	2 cut(s)	473, 1027
EarI	CTCTTC	2 cut(s)	473, 1027
EciI	GGCGGA	3 cut(s)	132, 186, 205
Ecl136II	GAGCTC	3 cut(s)	52, 163, 578
EclXI	CGGCCG	1 cut(s)	402
Eco130I	CCWWGG	1 cut(s)	156
Eco24I	GRGCYC	3 cut(s)	54, 165, 580
Eco31I	GGTCTC	2 cut(s)	401, 443
Eco47I	GGWCC	4 cut(s)	4, 44, 670, 833
Eco52I	CGGCCG	1 cut(s)	402
Eco53kI	GAGCTC	3 cut(s)	52, 163, 578
Eco57I	CTGAAG	2 cut(s)	929, 1008
Eco88I	CYCGRG	3 cut(s)	47, 53, 104
EcoICRI	GAGCTC	3 cut(s)	52, 163, 578
EcoO109I	RGGNCCY	2 cut(s)	44, 508
EcoRII	CCWGG	4 cut(s)	452, 673, 787, 952
EcoT14I	CCWWGG	1 cut(s)	156
EcoT38I	GRGCYC	3 cut(s)	54, 165, 580
ErhI	CCWWGG	1 cut(s)	156
Esp3I	CGTCTC	1 cut(s)	217
FaeI	CATG	4 cut(s)	94, 160, 572, 731
FaiI	YATR	8 cut(s)	92, 158, 570, 606, 729, 815, 863, 981
FaqI	GGGAC	4 cut(s)	43, 57, 656, 721
FatI	CATG	4 cut(s)	90, 156, 568, 727
FauI	CCCGC	1 cut(s)	957
Fnu4HI	GCNGC	8 cut(s)	101, 200, 248, 434, 659, 777, 822, 950
FokI	GGATG	2 cut(s)	661, 690
FriOI	GRGCYC	3 cut(s)	54, 165, 580
Fsp4HI	GCNGC	8 cut(s)	101, 200, 248, 434, 659, 777, 822, 950
FspBI	CTAG	3 cut(s)	134, 624, 710
GlaI	GCGC	3 cut(s)	129, 234, 942
GluI	GCNGC	8 cut(s)	101, 200, 248, 434, 659, 777, 822, 950
HaeIII	GGCC	4 cut(s)	206, 404, 509, 883
HgaI	GACGC	4 cut(s)	199, 448, 554, 947
HhaI	GCGC	3 cut(s)	130, 235, 943
Hin1I	GRCGYC	2 cut(s)	210, 546
Hin1II	CATG	4 cut(s)	94, 160, 572, 731
Hin6I	GCGC	3 cut(s)	128, 233, 941
HinP1I	GCGC	3 cut(s)	128, 233, 941
HincII	GTYRAC	1 cut(s)	784
HindII	GTYRAC	1 cut(s)	784
HinfI	GANTC	3 cut(s)	56, 413, 1019
HphI	GGTGA	3 cut(s)	74, 115, 400
Hpy166II	GTNNAC	2 cut(s)	784, 833
Hpy188I	TCNGA	4 cut(s)	575, 840, 876, 1036
Hpy188III	TCNNGA	6 cut(s)	91, 134, 316, 369, 693, 710
Hpy8I	GTNNAC	2 cut(s)	784, 833
Hpy99I	CGWCG	5 cut(s)	364, 433, 449, 517, 585
HpyAV	CCTTC	4 cut(s)	130, 379, 493, 1057
HpyCH4III	ACNGT	4 cut(s)	22, 97, 191, 915
HpyCH4IV	ACGT	2 cut(s)	240, 564
HpyCH4V	TGCA	6 cut(s)	525, 661, 681, 733, 776, 1045
HpyF10VI	GCNNNNNNNGC	4 cut(s)	439, 620, 664, 949
HpyF3I	CTNAG	2 cut(s)	610, 1033
HpySE526I	ACGT	2 cut(s)	240, 564
Hsp92I	GRCGYC	2 cut(s)	210, 546
Hsp92II	CATG	4 cut(s)	94, 160, 572, 731
HspAI	GCGC	3 cut(s)	128, 233, 941
KflI	GGGWCCC	1 cut(s)	44
Kpn2I	TCCGGA	1 cut(s)	368
KroI	GCCGGC	3 cut(s)	206, 326, 400
KroNI	GCCGGC	3 cut(s)	208, 328, 402
Kzo9I	GATC	2 cut(s)	29, 318
LmnI	GCTCC	9 cut(s)	14, 122, 160, 168, 199, 356, 371, 487, 664
Lsp1109I	GCAGC	6 cut(s)	259, 445, 645, 788, 808, 961
LweI	GCATC	2 cut(s)	546, 668
MaeI	CTAG	3 cut(s)	134, 624, 710
MaeII	ACGT	2 cut(s)	240, 564
MaeIII	GTNAC	3 cut(s)	848, 865, 1052
MalI	GATC	2 cut(s)	31, 320
MbiI	CCGCTC	1 cut(s)	290
MboI	GATC	2 cut(s)	29, 318
MflI	RGATCY	1 cut(s)	29
MhlI	GDGCHC	4 cut(s)	54, 165, 196, 580
MluCI	AATT	7 cut(s)	65, 78, 259, 270, 283, 377, 792
MlyI	GAGTC	2 cut(s)	65, 1013
MnlI	CCTC	9 cut(s)	71, 176, 182, 459, 535, 639, 846, 882, 1016
MroI	TCCGGA	1 cut(s)	368
MroNI	GCCGGC	3 cut(s)	206, 326, 400
MroXI	GAANNNNTTC	1 cut(s)	78
MseI	TTAA	1 cut(s)	639
MslI	CAYNNNNRTG	1 cut(s)	95
MspA1I	CMGCKG	2 cut(s)	202, 436
MspR9I	CCNGG	7 cut(s)	27, 42, 71, 454, 675, 789, 954
MvaI	CCWGG	4 cut(s)	454, 675, 789, 954
MvnI	CGCG	4 cut(s)	128, 233, 585, 941
MwoI	GCNNNNNNNGC	4 cut(s)	439, 620, 664, 949
NaeI	GCCGGC	3 cut(s)	208, 328, 402
NciI	CCSGG	3 cut(s)	27, 42, 71
NcoI	CCATGG	1 cut(s)	156
NdeII	GATC	2 cut(s)	29, 318
NgoMIV	GCCGGC	3 cut(s)	206, 326, 400
NlaIII	CATG	4 cut(s)	94, 160, 572, 731
NlaIV	GGNNCC	8 cut(s)	6, 31, 45, 46, 183, 373, 510, 672
NmeAIII	GCCGAG	3 cut(s)	430, 452, 574
NmuCI	GTSAC	1 cut(s)	1052
NspV	TTCGAA	1 cut(s)	416
PaeR7I	CTCGAG	1 cut(s)	53
PagI	TCATGA	1 cut(s)	90
PcsI	WCGNNNNNNNCGW	1 cut(s)	237
PdiI	GCCGGC	3 cut(s)	208, 328, 402
PdmI	GAANNNNTTC	1 cut(s)	78
PfeI	GAWTC	1 cut(s)	413
Pfl23II	CGTACG	1 cut(s)	561
PflMI	CCANNNNNTGG	1 cut(s)	157
PfoI	TCCNGGA	1 cut(s)	69
PkrI	GCNGC	8 cut(s)	102, 201, 249, 435, 660, 778, 823, 951
PleI	GAGTC	2 cut(s)	64, 1013
PpsI	GAGTC	2 cut(s)	64, 1013
PpuMI	RGGWCCY	1 cut(s)	44
PshBI	ATTAAT	1 cut(s)	639
Psp124BI	GAGCTC	3 cut(s)	54, 165, 580
Psp5II	RGGWCCY	1 cut(s)	44
Psp6I	CCWGG	4 cut(s)	452, 673, 787, 952
PspGI	CCWGG	4 cut(s)	452, 673, 787, 952
PspLI	CGTACG	1 cut(s)	561
PspN4I	GGNNCC	8 cut(s)	6, 31, 45, 46, 183, 373, 510, 672
PspPI	GGNCC	5 cut(s)	4, 44, 508, 670, 833
PspPPI	RGGWCCY	1 cut(s)	44
PspXI	VCTCGAGB	1 cut(s)	53
PstI	CTGCAG	2 cut(s)	663, 1047
PstNI	CAGNNNCTG	1 cut(s)	667
PsuI	RGATCY	1 cut(s)	29
PvuII	CAGCTG	1 cut(s)	436
RsaI	GTAC	2 cut(s)	24, 563
RsaNI	GTAC	2 cut(s)	23, 562
RseI	CAYNNNNRTG	1 cut(s)	95
SacI	GAGCTC	3 cut(s)	54, 165, 580
SaqAI	TTAA	1 cut(s)	639
SatI	GCNGC	8 cut(s)	101, 200, 248, 434, 659, 777, 822, 950
Sau3AI	GATC	2 cut(s)	29, 318
Sau96I	GGNCC	5 cut(s)	4, 44, 508, 670, 833
SchI	GAGTC	2 cut(s)	65, 1013
ScrFI	CCNGG	7 cut(s)	27, 42, 71, 454, 675, 789, 954
SduI	GDGCHC	4 cut(s)	54, 165, 196, 580
SfaNI	GCATC	2 cut(s)	546, 668
SfcI	CTRYAG	2 cut(s)	659, 1043
Sfr274I	CTCGAG	1 cut(s)	53
SfuI	TTCGAA	1 cut(s)	416
SinI	GGWCC	4 cut(s)	4, 44, 670, 833
SlaI	CTCGAG	1 cut(s)	53
SmiMI	CAYNNNNRTG	1 cut(s)	95
SmlI	CTYRAG	1 cut(s)	53
SmoI	CTYRAG	1 cut(s)	53
Sse9I	AATT	7 cut(s)	65, 78, 259, 270, 283, 377, 792
SspMI	CTAG	3 cut(s)	134, 624, 710
SstI	GAGCTC	3 cut(s)	54, 165, 580
StyD4I	CCNGG	7 cut(s)	25, 40, 69, 452, 673, 787, 952
StyI	CCWWGG	1 cut(s)	156
TaaI	ACNGT	4 cut(s)	22, 97, 191, 915
TaiI	ACGT	2 cut(s)	243, 567
TaqI	TCGA	5 cut(s)	54, 317, 362, 416, 444
TaqII	GACCGA	3 cut(s)	410, 425, 545
TasI	AATT	7 cut(s)	65, 78, 259, 270, 283, 377, 792
TauI	GCSGC	2 cut(s)	103, 202
TfiI	GAWTC	1 cut(s)	413
Tru1I	TTAA	1 cut(s)	639
Tru9I	TTAA	1 cut(s)	639
TseFI	GTSAC	1 cut(s)	1052
TseI	GCWGC	6 cut(s)	247, 433, 658, 776, 821, 949
Tsp45I	GTSAC	1 cut(s)	1052
TspDTI	ATGAA	3 cut(s)	557, 665, 976
TspGWI	ACGGA	2 cut(s)	343, 611
Van91I	CCANNNNNTGG	1 cut(s)	157
VpaK11BI	GGWCC	4 cut(s)	4, 44, 670, 833
VspI	ATTAAT	1 cut(s)	639
XapI	RAATTY	1 cut(s)	78
XbaI	TCTAGA	2 cut(s)	133, 709
XhoI	CTCGAG	1 cut(s)	53
XmnI	GAANNNNTTC	1 cut(s)	78
XspI	CTAG	3 cut(s)	134, 624, 710

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.