Prupe.7G070200_v2.0.a1

Transcription factor

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Reverse (-)
10802242 .. 10808225
5984 bp
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UTR
Exon/CDS
Intron
Prupe.7G070200.1

Sequence Viewer

Length: 1056 bp
ATGGACCCAACCGGAGCAACCGTACCCGGATCCATTTTACCAGGACCCGAGTTCGAGTCCCTCCAATTCCGAGAAGAAATCCACCGACTCATGGCCGTGCCACCGGAGAACGCCAGCTCCTTCACGGCGCTTCTAGAACTTCCGCCGACTCAAGCCATGGAGCTCCTCCACCTCTCGCCGGAGGCCAACTCTACTCCGACTCCGGTGGCCATCTCCGGAGAGGTGCGCGTCCAACACCCTTTCAATTCCAGCCTCACCTTCCCTACAAACCCCGCCTTAATCGAACGCGCCGCCAAGTTCTCGATCTTTGCCGGAGAGGGCTCCCCGGAGACAAGCTCCATACCGTCCAACTCCGGCGCGGATTTGGAGAAGGTGAAGACCGAGCCGGTCGAGACCGATTCGAACCCGAACTCATCCCAGCTGACGCTTGACGCGACCAAGAACAACCAGAGGTCCTCGGCGAAGAGAAAGGAGCGAGAGAAGAAGGTTAAGGTCTCGACGAAGAAGAGCAAGAGCGAAATCAAAGAAGACGCCAACAAGGTTCCCTATGTTCATGTTCGTGCTCGGCGTGGGCAAGCCACAGACAACCATAGCTTAGCAGAGCGAGCGAGGAGAGAGAAGATTAATGCGAGGATGAAGCTGCTGCAGGAGCTGGTCCCAGGATGCAATAAGATTTCAGGCACGGCACTGGTTCTGGATGAAATCATCAATCACGTGCAGTCCCTACAACGTCAAGTTGAGTTCTTATCAATGAGACTTGCGGCAGTCAACCCAAGAATTGATTTCAACCTTGATAGTATATTGGCTGCTGAAAGTGGATCTCTAATGGAAGCTAACTTCGCCAATATGGTTACACCTCTGATGTGGCCAGAAGTCCCAATTAATGGAAACAGACAACCGTATCATCAGCAATGGCACTTCAATACTCATCACCCTGGTTGGGGGAGGGAAGAAGAAACTCATACTTTCATTACTCCAGAGACCTCCCTTATCAGTTGCGATTCTTCAGCAAATTCAGCAACTCTGCAGACAAGTCATTTGAAGATGGAGATGTGA

Protein Analysis

352

Amino Acids

38.83

Weight (kDa)

6.2

Isoelectric Point (pI)

49.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 884
AccII CGCG 4 cut(s) 228, 288, 359, 434
AccIII TCCGGA 1 cut(s) 215
AciI CCGC 5 cut(s) 143, 273, 291, 359, 761
AclWI GGATC 3 cut(s) 24, 37, 826
AcoI YGGCCR 3 cut(s) 93, 207, 866
AcsI RAATTY 1 cut(s) 1012
AcuI CTGAAG 1 cut(s) 990
AcvI CACGTG 1 cut(s) 715
AcyI GRCGYC 1 cut(s) 531
AfaI GTAC 1 cut(s) 24
AfiI CCNNNNNNNGG 5 cut(s) 91, 178, 884, 940, 941
AgsI TTSAA 4 cut(s) 244, 787, 922, 1042
AjnI CCWGG 3 cut(s) 40, 658, 934
AloI GAACNNNNNNTCC 2 cut(s) 101, 133
AluBI AGCT 8 cut(s) 117, 163, 336, 421, 594, 640, 652, 833
AluI AGCT 8 cut(s) 117, 163, 336, 421, 594, 640, 652, 833
Alw21I GWGCWC 2 cut(s) 165, 565
Alw26I GTCTC 5 cut(s) 323, 386, 499, 748, 974
AlwI GGATC 3 cut(s) 24, 37, 826
AlwNI CAGNNNCTG 1 cut(s) 652
Ama87I CYCGRG 1 cut(s) 47
Aor13HI TCCGGA 1 cut(s) 215
AoxI GGCC 4 cut(s) 93, 183, 207, 866
ApeKI GCWGC 3 cut(s) 640, 643, 806
ApoI RAATTY 1 cut(s) 1012
ArsI GACNNNNNNTTYG 2 cut(s) 1021, 1053
AseI ATTAAT 2 cut(s) 624, 882
AspLEI GCGC 4 cut(s) 130, 228, 290, 359
AspS9I GGNCC 4 cut(s) 4, 44, 453, 655
AsuC2I CCSGG 2 cut(s) 27, 326
AsuHPI GGTGA 3 cut(s) 247, 385, 923
AsuII TTCGAA 1 cut(s) 401
AvaI CYCGRG 1 cut(s) 47
AvaII GGWCC 4 cut(s) 4, 44, 453, 655
BaeI ACNNNNGTAYC 2 cut(s) 884, 917
BalI TGGCCA 2 cut(s) 209, 868
BamHI GGATCC 1 cut(s) 29
BanII GRGCYC 2 cut(s) 165, 323
BbrPI CACGTG 1 cut(s) 715
BbsI GAAGAC 2 cut(s) 383, 534
Bbv12I GWGCWC 2 cut(s) 165, 565
BbvI GCAGC 3 cut(s) 627, 630, 793
BccI CCATC 2 cut(s) 218, 1039
BceAI ACGGC 3 cut(s) 80, 141, 699
BciT130I CCWGG 3 cut(s) 42, 660, 936
BcnI CCSGG 2 cut(s) 27, 326
BcoDI GTCTC 5 cut(s) 323, 386, 499, 748, 974
BfaI CTAG 1 cut(s) 134
BfmI CTRYAG 2 cut(s) 644, 1025
BfoI RGCGCY 1 cut(s) 131
BisI GCNGC 5 cut(s) 291, 641, 644, 762, 807
BlpI GCTNAGC 1 cut(s) 595
BlsI GCNGC 5 cut(s) 292, 642, 645, 763, 808
Bme1390I CCNGG 5 cut(s) 27, 42, 326, 660, 936
Bme18I GGWCC 4 cut(s) 4, 44, 453, 655
BmeT110I CYCGRG 1 cut(s) 47
BmgT120I GGNCC 4 cut(s) 4, 44, 453, 655
BmiI GGNNCC 6 cut(s) 6, 31, 46, 322, 543, 657
BmrFI CCNGG 5 cut(s) 27, 42, 326, 660, 936
BmsI GCATC 1 cut(s) 653
BpiI GAAGAC 2 cut(s) 383, 534
BplI GAGNNNNNCTC 4 cut(s) 173, 205, 320, 352
BpmI CTGGAG 1 cut(s) 960
Bpu1102I GCTNAGC 1 cut(s) 595
Bpu14I TTCGAA 1 cut(s) 401
BpuEI CTTGAG 1 cut(s) 135
BpuMI CCSGG 2 cut(s) 27, 326
BsaAI YACGTR 1 cut(s) 715
BsaHI GRCGYC 1 cut(s) 531
BsaI GGTCTC 3 cut(s) 386, 499, 974
BsaJI CCNNGG 5 cut(s) 156, 324, 456, 658, 934
BsaWI WCCGGW 4 cut(s) 11, 103, 202, 215
BsaXI ACNNNNNCTCC 6 cut(s) 6, 36, 101, 131, 184, 214
Bsc4I CCNNNNNNNGG 5 cut(s) 91, 178, 884, 940, 941
Bse118I RCCGGY 1 cut(s) 385
Bse1I ACTGG 1 cut(s) 693
Bse3DI GCAATG 1 cut(s) 917
BseAI TCCGGA 1 cut(s) 215
BseBI CCWGG 3 cut(s) 42, 660, 936
BseDI CCNNGG 5 cut(s) 156, 324, 456, 658, 934
BseGI GGATG 4 cut(s) 413, 639, 668, 703
BseLI CCNNNNNNNGG 5 cut(s) 91, 178, 884, 940, 941
BseMI GCAATG 1 cut(s) 917
BseNI ACTGG 1 cut(s) 693
BseRI GAGGAG 2 cut(s) 155, 625
BseXI GCAGC 3 cut(s) 627, 630, 793
BseYI CCCAGC 1 cut(s) 417
BsgI GTGCAG 1 cut(s) 737
Bsh1236I CGCG 4 cut(s) 228, 288, 359, 434
Bsh1285I CGRYCG 1 cut(s) 390
BshFI GGCC 4 cut(s) 95, 185, 209, 868
BsiEI CGRYCG 1 cut(s) 390
BsiHKAI GWGCWC 2 cut(s) 165, 565
BsiHKCI CYCGRG 1 cut(s) 47
BslFI GGGAC 4 cut(s) 43, 641, 706, 860
BslI CCNNNNNNNGG 5 cut(s) 91, 178, 884, 940, 941
BsmAI GTCTC 5 cut(s) 323, 386, 499, 748, 974
BsmFI GGGAC 4 cut(s) 43, 641, 706, 860
BsnI GGCC 4 cut(s) 95, 185, 209, 868
Bso31I GGTCTC 3 cut(s) 386, 499, 974
BsoBI CYCGRG 1 cut(s) 47
Bsp119I TTCGAA 1 cut(s) 401
Bsp1286I GDGCHC 3 cut(s) 165, 323, 565
Bsp13I TCCGGA 1 cut(s) 215
Bsp143I GATC 3 cut(s) 29, 303, 818
Bsp1720I GCTNAGC 1 cut(s) 595
Bsp19I CCATGG 1 cut(s) 156
BspACI CCGC 5 cut(s) 143, 273, 291, 359, 761
BspANI GGCC 4 cut(s) 95, 185, 209, 868
BspEI TCCGGA 1 cut(s) 215
BspFNI CGCG 4 cut(s) 228, 288, 359, 434
BspLI GGNNCC 6 cut(s) 6, 31, 46, 322, 543, 657
BspMAI CTGCAG 2 cut(s) 648, 1029
BspPI GGATC 3 cut(s) 24, 37, 826
BspQI GCTCTTC 1 cut(s) 500
BspT104I TTCGAA 1 cut(s) 401
BspTNI GGTCTC 3 cut(s) 386, 499, 974
BsrDI GCAATG 1 cut(s) 917
BsrFI RCCGGY 1 cut(s) 385
BsrI ACTGG 1 cut(s) 693
BssAI RCCGGY 1 cut(s) 385
BssECI CCNNGG 5 cut(s) 156, 324, 456, 658, 934
BssMI GATC 3 cut(s) 29, 303, 818
BssNI GRCGYC 1 cut(s) 531
BssT1I CCWWGG 1 cut(s) 156
Bst2UI CCWGG 3 cut(s) 42, 660, 936
Bst4CI ACNGT 3 cut(s) 22, 345, 900
Bst6I CTCTTC 2 cut(s) 458, 500
BstACI GRCGYC 1 cut(s) 531
BstBAI YACGTR 1 cut(s) 715
BstBI TTCGAA 1 cut(s) 401
BstC8I GCNNGC 3 cut(s) 115, 576, 606
BstDEI CTNAG 1 cut(s) 595
BstDSI CCRYGG 1 cut(s) 156
BstF5I GGATG 4 cut(s) 413, 639, 668, 703
BstFNI CGCG 4 cut(s) 228, 288, 359, 434
BstH2I RGCGCY 1 cut(s) 131
BstHHI GCGC 4 cut(s) 130, 228, 290, 359
BstKTI GATC 3 cut(s) 32, 306, 821
BstMAI GTCTC 5 cut(s) 323, 386, 499, 748, 974
BstMBI GATC 3 cut(s) 29, 303, 818
BstMCI CGRYCG 1 cut(s) 390
BstMWI GCNNNNNNNGC 4 cut(s) 605, 649, 839, 1016
BstNI CCWGG 3 cut(s) 42, 660, 936
BstSCI CCNGG 5 cut(s) 25, 40, 324, 658, 934
BstSFI CTRYAG 2 cut(s) 644, 1025
BstUI CGCG 4 cut(s) 228, 288, 359, 434
BstV1I GCAGC 3 cut(s) 627, 630, 793
BstV2I GAAGAC 2 cut(s) 383, 534
BstX2I RGATCY 2 cut(s) 29, 818
BstYI RGATCY 2 cut(s) 29, 818
BsuRI GGCC 4 cut(s) 95, 185, 209, 868
BtgI CCRYGG 1 cut(s) 156
BtsCI GGATG 4 cut(s) 413, 639, 668, 703
BtsIMutI CAGTG 1 cut(s) 686
Cac8I GCNNGC 3 cut(s) 115, 576, 606
CaiI CAGNNNCTG 1 cut(s) 652
CfoI GCGC 4 cut(s) 130, 228, 290, 359
Cfr10I RCCGGY 1 cut(s) 385
Cfr13I GGNCC 4 cut(s) 4, 44, 453, 655
CseI GACGC 4 cut(s) 217, 433, 440, 539
Csp6I GTAC 1 cut(s) 23
CviAII CATG 3 cut(s) 91, 157, 554
CviQI GTAC 1 cut(s) 23
DdeI CTNAG 1 cut(s) 595
DpnI GATC 3 cut(s) 31, 305, 820
DpnII GATC 3 cut(s) 29, 303, 818
EaeI YGGCCR 3 cut(s) 93, 207, 866
Eam1104I CTCTTC 2 cut(s) 458, 500
EarI CTCTTC 2 cut(s) 458, 500
EciI GGCGGA 1 cut(s) 132
Ecl136II GAGCTC 1 cut(s) 163
Eco130I CCWWGG 1 cut(s) 156
Eco24I GRGCYC 2 cut(s) 165, 323
Eco31I GGTCTC 3 cut(s) 386, 499, 974
Eco47I GGWCC 4 cut(s) 4, 44, 453, 655
Eco53kI GAGCTC 1 cut(s) 163
Eco57I CTGAAG 1 cut(s) 990
Eco72I CACGTG 1 cut(s) 715
Eco88I CYCGRG 1 cut(s) 47
EcoICRI GAGCTC 1 cut(s) 163
EcoO109I RGGNCCY 2 cut(s) 44, 453
EcoRII CCWGG 3 cut(s) 40, 658, 934
EcoT14I CCWWGG 1 cut(s) 156
EcoT38I GRGCYC 2 cut(s) 165, 323
ErhI CCWWGG 1 cut(s) 156
FaeI CATG 3 cut(s) 94, 160, 557
FaiI YATR 9 cut(s) 92, 158, 341, 549, 555, 591, 800, 848, 963
FaqI GGGAC 4 cut(s) 43, 641, 706, 860
FatI CATG 3 cut(s) 90, 156, 553
FauI CCCGC 1 cut(s) 280
Fnu4HI GCNGC 5 cut(s) 291, 641, 644, 762, 807
FokI GGATG 4 cut(s) 400, 646, 675, 710
FriOI GRGCYC 2 cut(s) 165, 323
Fsp4HI GCNGC 5 cut(s) 291, 641, 644, 762, 807
FspBI CTAG 1 cut(s) 134
GlaI GCGC 4 cut(s) 129, 227, 289, 358
GluI GCNGC 5 cut(s) 291, 641, 644, 762, 807
GsaI CCCAGC 1 cut(s) 421
GsuI CTGGAG 1 cut(s) 960
HaeII RGCGCY 1 cut(s) 131
HaeIII GGCC 4 cut(s) 95, 185, 209, 868
HgaI GACGC 4 cut(s) 217, 433, 440, 539
HhaI GCGC 4 cut(s) 130, 228, 290, 359
Hin1I GRCGYC 1 cut(s) 531
Hin1II CATG 3 cut(s) 94, 160, 557
Hin6I GCGC 4 cut(s) 128, 226, 288, 357
HinP1I GCGC 4 cut(s) 128, 226, 288, 357
HincII GTYRAC 1 cut(s) 769
HindII GTYRAC 1 cut(s) 769
HinfI GANTC 6 cut(s) 56, 87, 148, 199, 398, 1001
HphI GGTGA 3 cut(s) 247, 385, 923
Hpy166II GTNNAC 1 cut(s) 769
Hpy188I TCNGA 3 cut(s) 71, 198, 861
Hpy188III TCNNGA 7 cut(s) 134, 216, 301, 391, 496, 695, 977
Hpy8I GTNNAC 1 cut(s) 769
Hpy99I CGWCG 1 cut(s) 502
HpyAV CCTTC 4 cut(s) 130, 268, 364, 478
HpyCH4III ACNGT 3 cut(s) 22, 345, 900
HpyCH4IV ACGT 2 cut(s) 714, 730
HpyCH4V TGCA 4 cut(s) 646, 666, 718, 1027
HpyF10VI GCNNNNNNNGC 4 cut(s) 605, 649, 839, 1016
HpyF3I CTNAG 1 cut(s) 595
HpySE526I ACGT 2 cut(s) 714, 730
Hsp92I GRCGYC 1 cut(s) 531
Hsp92II CATG 3 cut(s) 94, 160, 557
HspAI GCGC 4 cut(s) 128, 226, 288, 357
Kpn2I TCCGGA 1 cut(s) 215
Kzo9I GATC 3 cut(s) 29, 303, 818
LguI GCTCTTC 1 cut(s) 500
LmnI GCTCC 8 cut(s) 14, 122, 160, 168, 326, 341, 472, 649
Lsp1109I GCAGC 3 cut(s) 627, 630, 793
LweI GCATC 1 cut(s) 653
MaeI CTAG 1 cut(s) 134
MaeII ACGT 2 cut(s) 714, 730
MaeIII GTNAC 1 cut(s) 850
MalI GATC 3 cut(s) 31, 305, 820
MboI GATC 3 cut(s) 29, 303, 818
MflI RGATCY 2 cut(s) 29, 818
MhlI GDGCHC 3 cut(s) 165, 323, 565
MlsI TGGCCA 2 cut(s) 209, 868
MluCI AATT 5 cut(s) 65, 244, 777, 879, 1012
MluNI TGGCCA 2 cut(s) 209, 868
MlyI GAGTC 4 cut(s) 65, 81, 142, 193
MmeI TCCRAC 3 cut(s) 221, 256, 372
Mox20I TGGCCA 2 cut(s) 209, 868
MroI TCCGGA 1 cut(s) 215
MscI TGGCCA 2 cut(s) 209, 868
MseI TTAA 4 cut(s) 278, 489, 624, 882
MslI CAYNNNNRTG 2 cut(s) 95, 558
Msp20I TGGCCA 2 cut(s) 209, 868
MspA1I CMGCKG 1 cut(s) 421
MspR9I CCNGG 5 cut(s) 27, 42, 326, 660, 936
MvaI CCWGG 3 cut(s) 42, 660, 936
MvnI CGCG 4 cut(s) 228, 288, 359, 434
MwoI GCNNNNNNNGC 4 cut(s) 605, 649, 839, 1016
NciI CCSGG 2 cut(s) 27, 326
NcoI CCATGG 1 cut(s) 156
NdeII GATC 3 cut(s) 29, 303, 818
NlaIII CATG 3 cut(s) 94, 160, 557
NlaIV GGNNCC 6 cut(s) 6, 31, 46, 322, 543, 657
NmeAIII GCCGAG 2 cut(s) 437, 544
NspV TTCGAA 1 cut(s) 401
PciSI GCTCTTC 1 cut(s) 500
PcsI WCGNNNNNNNCGW 2 cut(s) 431, 565
PfeI GAWTC 2 cut(s) 398, 1001
PflMI CCANNNNNTGG 1 cut(s) 884
PkrI GCNGC 5 cut(s) 292, 642, 645, 763, 808
PleI GAGTC 4 cut(s) 64, 81, 142, 193
PmaCI CACGTG 1 cut(s) 715
PmlI CACGTG 1 cut(s) 715
PpsI GAGTC 4 cut(s) 64, 81, 142, 193
Ppu21I YACGTR 1 cut(s) 715
PpuMI RGGWCCY 2 cut(s) 44, 453
PshBI ATTAAT 2 cut(s) 624, 882
Psp124BI GAGCTC 1 cut(s) 165
Psp5II RGGWCCY 2 cut(s) 44, 453
Psp6I CCWGG 3 cut(s) 40, 658, 934
PspCI CACGTG 1 cut(s) 715
PspFI CCCAGC 1 cut(s) 417
PspGI CCWGG 3 cut(s) 40, 658, 934
PspN4I GGNNCC 6 cut(s) 6, 31, 46, 322, 543, 657
PspPI GGNCC 4 cut(s) 4, 44, 453, 655
PspPPI RGGWCCY 2 cut(s) 44, 453
PstI CTGCAG 2 cut(s) 648, 1029
PstNI CAGNNNCTG 1 cut(s) 652
PsuI RGATCY 2 cut(s) 29, 818
PvuII CAGCTG 1 cut(s) 421
RsaI GTAC 1 cut(s) 24
RsaNI GTAC 1 cut(s) 23
RseI CAYNNNNRTG 2 cut(s) 95, 558
SacI GAGCTC 1 cut(s) 165
SapI GCTCTTC 1 cut(s) 500
SaqAI TTAA 4 cut(s) 278, 489, 624, 882
SatI GCNGC 5 cut(s) 291, 641, 644, 762, 807
Sau3AI GATC 3 cut(s) 29, 303, 818
Sau96I GGNCC 4 cut(s) 4, 44, 453, 655
SchI GAGTC 4 cut(s) 65, 81, 142, 193
ScrFI CCNGG 5 cut(s) 27, 42, 326, 660, 936
SduI GDGCHC 3 cut(s) 165, 323, 565
SfaNI GCATC 1 cut(s) 653
SfcI CTRYAG 2 cut(s) 644, 1025
SfuI TTCGAA 1 cut(s) 401
SinI GGWCC 4 cut(s) 4, 44, 453, 655
SmiMI CAYNNNNRTG 2 cut(s) 95, 558
SmlI CTYRAG 1 cut(s) 150
SmoI CTYRAG 1 cut(s) 150
Sse9I AATT 5 cut(s) 65, 244, 777, 879, 1012
SsiI CCGC 5 cut(s) 143, 273, 291, 359, 761
SspMI CTAG 1 cut(s) 134
SstI GAGCTC 1 cut(s) 165
StyD4I CCNGG 5 cut(s) 25, 40, 324, 658, 934
StyI CCWWGG 1 cut(s) 156
TaaI ACNGT 3 cut(s) 22, 345, 900
TaiI ACGT 2 cut(s) 717, 733
TaqI TCGA 6 cut(s) 54, 282, 302, 390, 401, 497
TaqII GACCGA 2 cut(s) 395, 410
TasI AATT 5 cut(s) 65, 244, 777, 879, 1012
TauI GCSGC 2 cut(s) 293, 764
TfiI GAWTC 2 cut(s) 398, 1001
Tru1I TTAA 4 cut(s) 278, 489, 624, 882
Tru9I TTAA 4 cut(s) 278, 489, 624, 882
TscAI CASTG 1 cut(s) 693
TseI GCWGC 3 cut(s) 640, 643, 806
TspDTI ATGAA 4 cut(s) 542, 650, 714, 958
TspRI CASTG 1 cut(s) 693
Van91I CCANNNNNTGG 1 cut(s) 884
VpaK11BI GGWCC 4 cut(s) 4, 44, 453, 655
VspI ATTAAT 2 cut(s) 624, 882
XapI RAATTY 1 cut(s) 1012
XbaI TCTAGA 1 cut(s) 133
XspI CTAG 1 cut(s) 134
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.