Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr3

Orthogroup ID

OG0004976

Physical Location & Seq

Genomic Coordinates Forward (+)

25599503 .. 25604714

Gene Structure 5212 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw3G021270.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1083 bp

ATGGACCCAACCGCCGGAAACGTACCCGGATCCGCTGTAACCGGACCCGATCACGAAGAACCCGGACTCGAGACTCTCCAATTCCGCGAGGAAATCCAGCGGCTGATGACGGTGCCGCCGGACAACGCCAGCTCCTTCACGGCGCTTCTGGAACTTCCGCCGACCCAAGCCATGGAGCTCCTCCACCTCTCGCCGGAGTCCGAACCTAATCCGGCTCCGGCCGCGGTTTCAGGCAAGCCGCCGCCGCCGCTGCTCGAGCCCCGCGCGCATCCTTTCAATTCCATCCTCACGTTTCCCAGCAACGCCGCCCTAATCGAACGCGCCGCCAAGTTCTCGATCTTCGGCGGCGGCGAGCAGTCGCCGGAGACGGGGGCCGTGCCGTCCAATCCCGGCGTCAACTTGGAGAAGGTGAAGAGCGAGCCTGCCGAGTCCGATTCGAACCCTAACTCGTCGCAGGAGACTAAGAACAACCAAAGGTCGTCGGCCAAGAGAAAGGAGCGAGAAAAGAAGGTCAAGGTATCAATGAAAAAGAGCAAAATTGAAGCTAAGGAAGATGCTGACAAGATTCCCTATGTTCACGTTCGAGCTCGCCGGGGTCAAGCTACAGATAGCCATAGCTTAGCAGAGCGAGCGAGGAGAGAGAAAATTAATGCGAGGATGAAGTTGCTACAGGAGCTGGTCCCAGGATGCAATAAGATTTCAGGTACCGCCTTAGTTCTAGATGAAATCATCAATCATGTGCAGTCCCTACAACGTCAAGTTGAGTTCTTATCGATGAGACTTGCGACAGTCGACCCAAGAATTGATAGCAACCTTGATCATTTATTGGCCACTGAAAGTATAGCTCTAATGCAAAGTAACTTCTCCAATATGGCTCCACCCATTATGTGGCCAGAACTTCCCATCAATGGGAACAGACAACAGTATCAACAGCAATGGCATTTTGATGCTCTTCATCAGCCAGGTTGGGGGAGGGAAGAAGATAATCATATTTTCATTACTCCAGAGGCCTCACTCATCAGTTGCAACCCTTCAGCAAATTCAGCATCTCTGCACACAGGTCACGTGAAGACGGAGCTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HLH

Protein Analysis

360

Amino Acids

39.61

Weight (kDa)

5.98

Isoelectric Point (pI)

55.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HLH	PF00010	204 - 251	3e-06	Helix-loop-helix DNA-binding domain
bHLH_SAC51	PF23173	209 - 254	3.6e-07	Transcription factor SAC51 bHLH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004976)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G42300 AT2G42300 AT2G42300 AT2G42300 AT2G42300 AT3G57800 AT3G57800
fragaria_vesca	FvH4_6g22930 FvH4_6g22930 FvH4_6g22930 FvH4_6g22930 FvH4_6g22930
malus_domestica	MD12G1063900.v1.1 MD12G1064000.v1.1 MD14G1064200.v1.1
prunus_persica	Prupe.7G070200_v2.0.a1
pyrus_communis	pycom12g05580 pycom14g05190
rosa_chinensis	RchiOBHm_Chr3g0480751
rosa_laevigata	RLG00000023457
rosa_multiflora	Rmu_sc0003902.1_g000017
rosa_roxburghii	Rroxscaffold_6G00401100
rosa_rugosa	Rorug03G0185300 Rorug03G0185300
rosa_samantha	Rh3AG237400 Rh3BG270900 Rh3CG267000 Rh3CG267100 Rh3DG263000
rosa_wichuraiana	Rw3G021270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	704
AccB1I	GGYRCC	2 cut(s)	112, 704
AccB7I	CCANNNNNTGG	2 cut(s)	172, 888
AccI	GTMKAC	1 cut(s)	792
AccII	CGCG	5 cut(s)	87, 224, 264, 266, 321
AclWI	GGATC	2 cut(s)	24, 37
AcoI	YGGCCR	4 cut(s)	219, 483, 828, 890
AcsI	RAATTY	1 cut(s)	1039
AcuI	CTGAAG	1 cut(s)	1017
AcvI	CACGTG	1 cut(s)	1066
AcyI	GRCGYC	1 cut(s)	393
AfaI	GTAC	2 cut(s)	24, 706
AfiI	CCNNNNNNNGG	8 cut(s)	14, 172, 193, 368, 888, 908, 909, 968
AgsI	TTSAA	2 cut(s)	277, 542
AjnI	CCWGG	2 cut(s)	682, 961
AluBI	AGCT	9 cut(s)	132, 178, 545, 587, 602, 618, 676, 845, 1078
AluI	AGCT	9 cut(s)	132, 178, 545, 587, 602, 618, 676, 845, 1078
Alw21I	GWGCWC	2 cut(s)	180, 589
Alw26I	GTCTC	4 cut(s)	65, 359, 452, 772
AlwI	GGATC	2 cut(s)	24, 37
AlwNI	CAGNNNCTG	2 cut(s)	103, 676
Ama87I	CYCGRG	2 cut(s)	68, 254
AoxI	GGCC	6 cut(s)	219, 372, 483, 828, 890, 1008
ApeKI	GCWGC	1 cut(s)	250
ApoI	RAATTY	1 cut(s)	1039
AseI	ATTAAT	1 cut(s)	648
Asp718I	GGTACC	1 cut(s)	704
AspLEI	GCGC	4 cut(s)	145, 266, 268, 323
AspS9I	GGNCC	4 cut(s)	4, 44, 372, 679
AsuC2I	CCSGG	4 cut(s)	27, 63, 390, 593
AsuHPI	GGTGA	1 cut(s)	421
AsuII	TTCGAA	1 cut(s)	437
AvaI	CYCGRG	2 cut(s)	68, 254
AvaII	GGWCC	3 cut(s)	4, 44, 679
BaeI	ACNNNNGTAYC	2 cut(s)	908, 941
BalI	TGGCCA	2 cut(s)	830, 892
BamHI	GGATCC	1 cut(s)	29
BanI	GGYRCC	2 cut(s)	112, 704
BanII	GRGCYC	3 cut(s)	180, 261, 589
BbrPI	CACGTG	1 cut(s)	1066
BbsI	GAAGAC	1 cut(s)	1076
Bbv12I	GWGCWC	2 cut(s)	180, 589
BbvI	GCAGC	1 cut(s)	237
BccI	CCATC	2 cut(s)	290, 911
BceAI	ACGGC	3 cut(s)	156, 359, 364
BciT130I	CCWGG	2 cut(s)	684, 963
BclI	TGATCA	1 cut(s)	817
BcnI	CCSGG	4 cut(s)	27, 63, 390, 593
BcoDI	GTCTC	4 cut(s)	65, 359, 452, 772
BfaI	CTAG	1 cut(s)	719
BfmI	CTRYAG	2 cut(s)	603, 668
BfoI	RGCGCY	1 cut(s)	146
BlpI	GCTNAGC	1 cut(s)	619
Bme1390I	CCNGG	6 cut(s)	27, 63, 390, 593, 684, 963
Bme18I	GGWCC	3 cut(s)	4, 44, 679
BmeT110I	CYCGRG	2 cut(s)	68, 254
BmgT120I	GGNCC	4 cut(s)	4, 44, 372, 679
BmiI	GGNNCC	9 cut(s)	6, 31, 46, 114, 216, 373, 681, 706, 876
BmrFI	CCNGG	6 cut(s)	27, 63, 390, 593, 684, 963
BmsI	GCATC	5 cut(s)	277, 544, 677, 937, 1055
BpiI	GAAGAC	1 cut(s)	1076
BpmI	CTGGAG	1 cut(s)	987
Bpu10I	CCTNAGC	1 cut(s)	546
Bpu1102I	GCTNAGC	1 cut(s)	619
Bpu14I	TTCGAA	1 cut(s)	437
BpuMI	CCSGG	4 cut(s)	27, 63, 390, 593
Bsa29I	ATCGAT	1 cut(s)	773
BsaAI	YACGTR	1 cut(s)	1066
BsaHI	GRCGYC	1 cut(s)	393
BsaJI	CCNNGG	4 cut(s)	171, 222, 592, 682
BsaWI	WCCGGW	1 cut(s)	41
BsaXI	ACNNNNNCTCC	2 cut(s)	116, 146
Bsc4I	CCNNNNNNNGG	8 cut(s)	14, 172, 193, 368, 888, 908, 909, 968
Bse3DI	GCAATG	1 cut(s)	941
BseBI	CCWGG	2 cut(s)	684, 963
BseCI	ATCGAT	1 cut(s)	773
BseDI	CCNNGG	4 cut(s)	171, 222, 592, 682
BseGI	GGATG	4 cut(s)	268, 282, 663, 692
BseLI	CCNNNNNNNGG	8 cut(s)	14, 172, 193, 368, 888, 908, 909, 968
BseMI	GCAATG	1 cut(s)	941
BsePI	GCGCGC	1 cut(s)	264
BseRI	GAGGAG	2 cut(s)	170, 649
BseX3I	CGGCCG	1 cut(s)	219
BseXI	GCAGC	1 cut(s)	237
BseYI	CCCAGC	1 cut(s)	296
BsgI	GTGCAG	2 cut(s)	761, 1037
Bsh1236I	CGCG	5 cut(s)	87, 224, 264, 266, 321
Bsh1285I	CGRYCG	1 cut(s)	222
BshFI	GGCC	6 cut(s)	221, 374, 485, 830, 892, 1010
BshNI	GGYRCC	2 cut(s)	112, 704
BshVI	ATCGAT	1 cut(s)	773
BsiEI	CGRYCG	1 cut(s)	222
BsiHKAI	GWGCWC	2 cut(s)	180, 589
BsiHKCI	CYCGRG	2 cut(s)	68, 254
BslFI	GGGAC	2 cut(s)	665, 730
BslI	CCNNNNNNNGG	8 cut(s)	14, 172, 193, 368, 888, 908, 909, 968
BsmAI	GTCTC	4 cut(s)	65, 359, 452, 772
BsmBI	CGTCTC	1 cut(s)	359
BsmFI	GGGAC	2 cut(s)	665, 730
BsnI	GGCC	6 cut(s)	221, 374, 485, 830, 892, 1010
BsoBI	CYCGRG	2 cut(s)	68, 254
Bsp119I	TTCGAA	1 cut(s)	437
Bsp1286I	GDGCHC	3 cut(s)	180, 261, 589
Bsp143I	GATC	4 cut(s)	29, 49, 336, 817
Bsp1720I	GCTNAGC	1 cut(s)	619
Bsp19I	CCATGG	1 cut(s)	171
BspANI	GGCC	6 cut(s)	221, 374, 485, 830, 892, 1010
BspDI	ATCGAT	1 cut(s)	773
BspFNI	CGCG	5 cut(s)	87, 224, 264, 266, 321
BspLI	GGNNCC	9 cut(s)	6, 31, 46, 114, 216, 373, 681, 706, 876
BspPI	GGATC	2 cut(s)	24, 37
BspQI	GCTCTTC	2 cut(s)	407, 957
BspT104I	TTCGAA	1 cut(s)	437
BspT107I	GGYRCC	2 cut(s)	112, 704
BsrDI	GCAATG	1 cut(s)	941
BssECI	CCNNGG	4 cut(s)	171, 222, 592, 682
BssHII	GCGCGC	1 cut(s)	264
BssMI	GATC	4 cut(s)	29, 49, 336, 817
BssNI	GRCGYC	1 cut(s)	393
BssT1I	CCWWGG	1 cut(s)	171
Bst2UI	CCWGG	2 cut(s)	684, 963
Bst4CI	ACNGT	3 cut(s)	112, 790, 924
Bst6I	CTCTTC	2 cut(s)	407, 957
BstACI	GRCGYC	1 cut(s)	393
BstBAI	YACGTR	1 cut(s)	1066
BstBI	TTCGAA	1 cut(s)	437
BstC8I	GCNNGC	8 cut(s)	130, 236, 266, 353, 419, 423, 589, 630
BstDEI	CTNAG	4 cut(s)	462, 546, 619, 712
BstDSI	CCRYGG	2 cut(s)	171, 222
BstF5I	GGATG	4 cut(s)	268, 282, 663, 692
BstFNI	CGCG	5 cut(s)	87, 224, 264, 266, 321
BstH2I	RGCGCY	1 cut(s)	146
BstHHI	GCGC	4 cut(s)	145, 266, 268, 323
BstKTI	GATC	4 cut(s)	32, 52, 339, 820
BstMAI	GTCTC	4 cut(s)	65, 359, 452, 772
BstMBI	GATC	4 cut(s)	29, 49, 336, 817
BstMCI	CGRYCG	1 cut(s)	222
BstMWI	GCNNNNNNNGC	9 cut(s)	221, 244, 247, 250, 256, 265, 629, 673, 1043
BstNI	CCWGG	2 cut(s)	684, 963
BstSCI	CCNGG	6 cut(s)	25, 61, 388, 591, 682, 961
BstSFI	CTRYAG	2 cut(s)	603, 668
BstUI	CGCG	5 cut(s)	87, 224, 264, 266, 321
BstV1I	GCAGC	1 cut(s)	237
BstV2I	GAAGAC	1 cut(s)	1076
BstX2I	RGATCY	1 cut(s)	29
BstYI	RGATCY	1 cut(s)	29
BstZI	CGGCCG	1 cut(s)	219
Bsu15I	ATCGAT	1 cut(s)	773
BsuRI	GGCC	6 cut(s)	221, 374, 485, 830, 892, 1010
BsuTUI	ATCGAT	1 cut(s)	773
BtgI	CCRYGG	2 cut(s)	171, 222
BtsCI	GGATG	4 cut(s)	268, 282, 663, 692
BtsIMutI	CAGTG	1 cut(s)	831
Cac8I	GCNNGC	8 cut(s)	130, 236, 266, 353, 419, 423, 589, 630
CaiI	CAGNNNCTG	2 cut(s)	103, 676
CfoI	GCGC	4 cut(s)	145, 266, 268, 323
Cfr13I	GGNCC	4 cut(s)	4, 44, 372, 679
Cfr42I	CCGCGG	1 cut(s)	225
ClaI	ATCGAT	1 cut(s)	773
CseI	GACGC	1 cut(s)	382
Csp6I	GTAC	2 cut(s)	23, 705
CviAII	CATG	2 cut(s)	172, 737
CviQI	GTAC	2 cut(s)	23, 705
DdeI	CTNAG	4 cut(s)	462, 546, 619, 712
DpnI	GATC	4 cut(s)	31, 51, 338, 819
DpnII	GATC	4 cut(s)	29, 49, 336, 817
EaeI	YGGCCR	4 cut(s)	219, 483, 828, 890
EagI	CGGCCG	1 cut(s)	219
Eam1104I	CTCTTC	2 cut(s)	407, 957
EarI	CTCTTC	2 cut(s)	407, 957
EciI	GGCGGA	1 cut(s)	147
Ecl136II	GAGCTC	2 cut(s)	178, 587
EclXI	CGGCCG	1 cut(s)	219
Eco130I	CCWWGG	1 cut(s)	171
Eco147I	AGGCCT	1 cut(s)	1010
Eco24I	GRGCYC	3 cut(s)	180, 261, 589
Eco47I	GGWCC	3 cut(s)	4, 44, 679
Eco52I	CGGCCG	1 cut(s)	219
Eco53kI	GAGCTC	2 cut(s)	178, 587
Eco57I	CTGAAG	1 cut(s)	1017
Eco72I	CACGTG	1 cut(s)	1066
Eco88I	CYCGRG	2 cut(s)	68, 254
EcoICRI	GAGCTC	2 cut(s)	178, 587
EcoRII	CCWGG	2 cut(s)	682, 961
EcoT14I	CCWWGG	1 cut(s)	171
EcoT38I	GRGCYC	3 cut(s)	180, 261, 589
ErhI	CCWWGG	1 cut(s)	171
Esp3I	CGTCTC	1 cut(s)	359
FaeI	CATG	2 cut(s)	175, 740
FaiI	YATR	8 cut(s)	173, 573, 615, 738, 842, 872, 887, 990
FaqI	GGGAC	2 cut(s)	665, 730
FatI	CATG	2 cut(s)	171, 736
FauI	CCCGC	1 cut(s)	269
FbaI	TGATCA	1 cut(s)	817
FblI	GTMKAC	1 cut(s)	792
FokI	GGATG	4 cut(s)	255, 269, 670, 699
FriOI	GRGCYC	3 cut(s)	180, 261, 589
FspBI	CTAG	1 cut(s)	719
GlaI	GCGC	4 cut(s)	144, 265, 267, 322
GsaI	CCCAGC	1 cut(s)	300
GsuI	CTGGAG	1 cut(s)	987
HaeII	RGCGCY	1 cut(s)	146
HaeIII	GGCC	6 cut(s)	221, 374, 485, 830, 892, 1010
HgaI	GACGC	1 cut(s)	382
HhaI	GCGC	4 cut(s)	145, 266, 268, 323
Hin1I	GRCGYC	1 cut(s)	393
Hin1II	CATG	2 cut(s)	175, 740
Hin6I	GCGC	4 cut(s)	143, 264, 266, 321
HinP1I	GCGC	4 cut(s)	143, 264, 266, 321
HincII	GTYRAC	2 cut(s)	397, 793
HindII	GTYRAC	2 cut(s)	397, 793
HinfI	GANTC	6 cut(s)	66, 73, 197, 428, 434, 565
HphI	GGTGA	1 cut(s)	421
Hpy166II	GTNNAC	3 cut(s)	397, 577, 793
Hpy188I	TCNGA	2 cut(s)	202, 433
Hpy188III	TCNNGA	6 cut(s)	53, 70, 149, 334, 719, 1004
Hpy8I	GTNNAC	3 cut(s)	397, 577, 793
Hpy99I	CGWCG	2 cut(s)	454, 484
HpyAV	CCTTC	4 cut(s)	145, 400, 502, 1041
HpyCH4III	ACNGT	3 cut(s)	112, 790, 924
HpyCH4IV	ACGT	5 cut(s)	21, 290, 579, 754, 1065
HpyCH4V	TGCA	5 cut(s)	690, 742, 853, 1026, 1054
HpyF10VI	GCNNNNNNNGC	9 cut(s)	221, 244, 247, 250, 256, 265, 629, 673, 1043
HpyF3I	CTNAG	4 cut(s)	462, 546, 619, 712
HpySE526I	ACGT	5 cut(s)	21, 290, 579, 754, 1065
Hsp92I	GRCGYC	1 cut(s)	393
Hsp92II	CATG	2 cut(s)	175, 740
HspAI	GCGC	4 cut(s)	143, 264, 266, 321
KpnI	GGTACC	1 cut(s)	708
Ksp22I	TGATCA	1 cut(s)	817
KspI	CCGCGG	1 cut(s)	225
Kzo9I	GATC	4 cut(s)	29, 49, 336, 817
LguI	GCTCTTC	2 cut(s)	407, 957
LmnI	GCTCC	8 cut(s)	137, 175, 183, 220, 496, 673, 880, 1075
Lsp1109I	GCAGC	1 cut(s)	237
LweI	GCATC	5 cut(s)	277, 544, 677, 937, 1055
MaeI	CTAG	1 cut(s)	719
MaeII	ACGT	5 cut(s)	21, 290, 579, 754, 1065
MaeIII	GTNAC	3 cut(s)	37, 857, 1061
MalI	GATC	4 cut(s)	31, 51, 338, 819
MboI	GATC	4 cut(s)	29, 49, 336, 817
MboII	GAAGA	8 cut(s)	68, 331, 424, 563, 944, 989, 992, 1081
MflI	RGATCY	1 cut(s)	29
MhlI	GDGCHC	3 cut(s)	180, 261, 589
MlsI	TGGCCA	2 cut(s)	830, 892
MluCI	AATT	6 cut(s)	80, 277, 537, 645, 801, 1039
MluNI	TGGCCA	2 cut(s)	830, 892
MlyI	GAGTC	4 cut(s)	60, 67, 206, 437
MnlI	CCTC	9 cut(s)	82, 191, 197, 296, 627, 648, 966, 1000, 1021
Mox20I	TGGCCA	2 cut(s)	830, 892
MscI	TGGCCA	2 cut(s)	830, 892
MseI	TTAA	1 cut(s)	648
MslI	CAYNNNNRTG	1 cut(s)	945
Msp20I	TGGCCA	2 cut(s)	830, 892
MspA1I	CMGCKG	4 cut(s)	35, 100, 224, 250
MspR9I	CCNGG	6 cut(s)	27, 63, 390, 593, 684, 963
MvaI	CCWGG	2 cut(s)	684, 963
MvnI	CGCG	5 cut(s)	87, 224, 264, 266, 321
MwoI	GCNNNNNNNGC	9 cut(s)	221, 244, 247, 250, 256, 265, 629, 673, 1043
NciI	CCSGG	4 cut(s)	27, 63, 390, 593
NcoI	CCATGG	1 cut(s)	171
NdeII	GATC	4 cut(s)	29, 49, 336, 817
NlaIII	CATG	2 cut(s)	175, 740
NlaIV	GGNNCC	9 cut(s)	6, 31, 46, 114, 216, 373, 681, 706, 876
NmeAIII	GCCGAG	1 cut(s)	451
NmuCI	GTSAC	1 cut(s)	1061
NspV	TTCGAA	1 cut(s)	437
PaeR7I	CTCGAG	2 cut(s)	68, 254
PauI	GCGCGC	1 cut(s)	264
PceI	AGGCCT	1 cut(s)	1010
PciSI	GCTCTTC	2 cut(s)	407, 957
PcsI	WCGNNNNNNNCGW	1 cut(s)	348
PfeI	GAWTC	2 cut(s)	434, 565
PflMI	CCANNNNNTGG	2 cut(s)	172, 888
PleI	GAGTC	4 cut(s)	60, 67, 205, 436
PmaCI	CACGTG	1 cut(s)	1066
PmlI	CACGTG	1 cut(s)	1066
PpsI	GAGTC	4 cut(s)	60, 67, 205, 436
Ppu21I	YACGTR	1 cut(s)	1066
PshBI	ATTAAT	1 cut(s)	648
Psp124BI	GAGCTC	2 cut(s)	180, 589
Psp6I	CCWGG	2 cut(s)	682, 961
PspCI	CACGTG	1 cut(s)	1066
PspFI	CCCAGC	1 cut(s)	296
PspGI	CCWGG	2 cut(s)	682, 961
PspN4I	GGNNCC	9 cut(s)	6, 31, 46, 114, 216, 373, 681, 706, 876
PspPI	GGNCC	4 cut(s)	4, 44, 372, 679
PspXI	VCTCGAGB	1 cut(s)	254
PstNI	CAGNNNCTG	2 cut(s)	103, 676
PsuI	RGATCY	1 cut(s)	29
PteI	GCGCGC	1 cut(s)	264
RsaI	GTAC	2 cut(s)	24, 706
RsaNI	GTAC	2 cut(s)	23, 705
RseI	CAYNNNNRTG	1 cut(s)	945
SacI	GAGCTC	2 cut(s)	180, 589
SacII	CCGCGG	1 cut(s)	225
SalI	GTCGAC	1 cut(s)	791
SapI	GCTCTTC	2 cut(s)	407, 957
SaqAI	TTAA	1 cut(s)	648
Sau3AI	GATC	4 cut(s)	29, 49, 336, 817
Sau96I	GGNCC	4 cut(s)	4, 44, 372, 679
SchI	GAGTC	4 cut(s)	60, 67, 206, 437
ScrFI	CCNGG	6 cut(s)	27, 63, 390, 593, 684, 963
SduI	GDGCHC	3 cut(s)	180, 261, 589
SfaNI	GCATC	5 cut(s)	277, 544, 677, 937, 1055
SfcI	CTRYAG	2 cut(s)	603, 668
Sfr274I	CTCGAG	2 cut(s)	68, 254
Sfr303I	CCGCGG	1 cut(s)	225
SfuI	TTCGAA	1 cut(s)	437
SgrBI	CCGCGG	1 cut(s)	225
SinI	GGWCC	3 cut(s)	4, 44, 679
SlaI	CTCGAG	2 cut(s)	68, 254
SmiMI	CAYNNNNRTG	1 cut(s)	945
SmlI	CTYRAG	2 cut(s)	68, 254
SmoI	CTYRAG	2 cut(s)	68, 254
Sse9I	AATT	6 cut(s)	80, 277, 537, 645, 801, 1039
SseBI	AGGCCT	1 cut(s)	1010
SspMI	CTAG	1 cut(s)	719
SstI	GAGCTC	2 cut(s)	180, 589
StuI	AGGCCT	1 cut(s)	1010
StyD4I	CCNGG	6 cut(s)	25, 61, 388, 591, 682, 961
StyI	CCWWGG	1 cut(s)	171
TaaI	ACNGT	3 cut(s)	112, 790, 924
TaiI	ACGT	5 cut(s)	24, 293, 582, 757, 1068
TaqI	TCGA	8 cut(s)	69, 255, 315, 335, 437, 583, 773, 792
TasI	AATT	6 cut(s)	80, 277, 537, 645, 801, 1039
TfiI	GAWTC	2 cut(s)	434, 565
Tru1I	TTAA	1 cut(s)	648
Tru9I	TTAA	1 cut(s)	648
TscAI	CASTG	1 cut(s)	838
TseFI	GTSAC	1 cut(s)	1061
TseI	GCWGC	1 cut(s)	250
Tsp45I	GTSAC	1 cut(s)	1061
TspDTI	ATGAA	5 cut(s)	539, 674, 738, 944, 985
TspRI	CASTG	1 cut(s)	838
Van91I	CCANNNNNTGG	2 cut(s)	172, 888
VpaK11BI	GGWCC	3 cut(s)	4, 44, 679
VspI	ATTAAT	1 cut(s)	648
XapI	RAATTY	1 cut(s)	1039
XbaI	TCTAGA	1 cut(s)	718
XcmI	CCANNNNNNNNNTGG	1 cut(s)	885
XhoI	CTCGAG	2 cut(s)	68, 254
XmiI	GTMKAC	1 cut(s)	792
XspI	CTAG	1 cut(s)	719

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.