Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr14

Orthogroup ID

OG0010690

Physical Location & Seq

Genomic Coordinates Reverse (-)

26535513 .. 26546876

Gene Structure 11364 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD14G1171600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1104 bp

ATGTGGGGTTCCATGCTTTTGCCTCCTCCAAGGACATGTAAAAAGATGGAATCTGGGAGTAGGTTTTACTCAGCTGATGAGTTCAGACTGGATGCCAAATGGCTGATTGATCCTAAGCATCTCTTTGTTGGGCCAAGAATTGGTGAGGGAGCTCATGCCAAAGTCTATGAGGGCAAATACAAAAACCAGACTGTTGCAATTAAAGTTGTTCATAGAGGAGAAACTCCAGAGGAGATTATCAAGAAAGAAGGACGGTTTGCCAGAGAGGTTGTAATGTTGTCGAGAGTTCAACATAAAAATTTAGTGAAGTTTATTGGTGCCTGCAAGGAGCCAGTAATGGTGATAGTTACTGAGCTTTTATTAGGTGGTACATTGCGTAAATATTGTCTAAACATGCGGCCAAGGTGCTTGGACATACGCGTTGCTGTTGGTTTCGCACTAGATATTGCTCGTGCGATGGAGTGCTTGCACTCTCATGGGATCATACACCGTGATTTGAAGCCTGAGAACTTGCTCTTGACTGCAGACCACAAAACAGTTAAATTAGCGGATTTTGGGTTGGCAAGAGAGGAGTCATTAACAGAGATGATGACTGCAGAAACCGGGACATACCGTTGGATGGCTCCAGAGCTGTACAGTACTGTTACATTAAGGCAGGGAGAGGGAAAGCATTACAACCACAAAGTGGATGCGTATAGCTTCGCGATTGTTTTGTGGGAACTCTTGCACAACAAATTGCCTTTCGAAGGCATGTCAAATCTCCAAGCAGCCTATGCAGCTGCCTTTAAAAATGTGAGGCCTAGTTCTGAAAACATCCCAGAGGAGTTGAACATCATCCTAACTTCATGCTGGCAGGAGGACCCAAACGCCCGGCCTAATTTCAGCCAAATAATTCAAATGCTACTAGATTTTCTTTACACCATATCTCCTCCTAAACCTGCCATTCCGCCACGGATATTCACTGAGAACAGAGTCCTGCCGCCAGAGTCTCCTGGTACGAGCGCCTTGATGTCAGCGCGTGAAGGCTCGGGGGAGACGCCCAAATTAGGAGAAATGGAAGACAAGCCAAAAGGTTTTTTCTTCTGCTTTAACCAGTGTTATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0035556 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase_Tyr

Protein Analysis

368

Amino Acids

41.63

Weight (kDa)

8.51

Isoelectric Point (pI)

44.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	45 - 300	1.3e-51	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	46 - 301	1.7e-56	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010690)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G50180
fragaria_vesca	FvH4_5g06280 FvH4_5g06280 FvH4_5g06280 FvH4_5g06280
malus_domestica	MD06G1165800.v1.1 MD14G1171600.v1.1
prunus_persica	Prupe.5G165700_v2.0.a1 Prupe.5G165700_v2.0.a1
pyrus_communis	pycom06g14830 pycom14g14330
rosa_chinensis	RchiOBHm_Chr7g0192581
rosa_laevigata	RLG00000004350
rosa_rugosa	Rorug07G0002300 Rorug07G0002400
rosa_samantha	Rh7AG126800 Rh7BG129000 Rh7CG130900 Rh7DG130200
rosa_wichuraiana	Rw7G010900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	946
AccB1I	GGYRCC	1 cut(s)	317
AccB7I	CCANNNNNTGG	2 cut(s)	140, 685
AccII	CGCG	3 cut(s)	420, 704, 1018
AciI	CCGC	4 cut(s)	397, 548, 947, 980
AclWI	GGATC	2 cut(s)	104, 488
AcoI	YGGCCR	1 cut(s)	398
AcsI	RAATTY	1 cut(s)	298
AcyI	GRCGYC	1 cut(s)	1037
AdeI	CACNNNGTG	1 cut(s)	685
AfaI	GTAC	4 cut(s)	370, 635, 640, 997
AfiI	CCNNNNNNNGG	5 cut(s)	140, 619, 685, 746, 1046
AflIII	ACRYGT	2 cut(s)	35, 418
AgsI	TTSAA	4 cut(s)	290, 499, 829, 896
AjnI	CCWGG	1 cut(s)	991
AluBI	AGCT	6 cut(s)	74, 152, 355, 631, 699, 779
AluI	AGCT	6 cut(s)	74, 152, 355, 631, 699, 779
Alw21I	GWGCWC	1 cut(s)	154
Alw26I	GTCTC	2 cut(s)	993, 1028
AlwI	GGATC	2 cut(s)	104, 488
Ama87I	CYCGRG	1 cut(s)	1027
AoxI	GGCC	4 cut(s)	131, 398, 797, 872
ApeKI	GCWGC	3 cut(s)	767, 776, 779
ApoI	RAATTY	1 cut(s)	298
AspLEI	GCGC	2 cut(s)	1004, 1018
AspS9I	GGNCC	2 cut(s)	131, 859
AsuC2I	CCSGG	2 cut(s)	604, 871
AsuHPI	GGTGA	2 cut(s)	155, 352
AsuII	TTCGAA	1 cut(s)	744
AvaI	CYCGRG	1 cut(s)	1027
AvaII	GGWCC	1 cut(s)	859
BanI	GGYRCC	1 cut(s)	317
BanII	GRGCYC	1 cut(s)	154
BauI	CACGAG	1 cut(s)	450
BbsI	GAAGAC	1 cut(s)	1065
Bbv12I	GWGCWC	1 cut(s)	154
BbvI	GCAGC	3 cut(s)	766, 779, 788
BccI	CCATC	3 cut(s)	40, 451, 613
BciT130I	CCWGG	1 cut(s)	993
BcnI	CCSGG	2 cut(s)	604, 871
BcoDI	GTCTC	2 cut(s)	993, 1028
BfaI	CTAG	3 cut(s)	440, 801, 905
BfmI	CTRYAG	2 cut(s)	522, 594
BfoI	RGCGCY	1 cut(s)	1005
BfuAI	ACCTGC	1 cut(s)	946
BisI	GCNGC	5 cut(s)	398, 768, 777, 780, 980
BlsI	GCNGC	5 cut(s)	399, 769, 778, 781, 981
BmcAI	AGTACT	1 cut(s)	640
Bme1390I	CCNGG	3 cut(s)	604, 871, 993
Bme18I	GGWCC	1 cut(s)	859
BmeT110I	CYCGRG	1 cut(s)	1027
BmgT120I	GGNCC	2 cut(s)	131, 859
BmiI	GGNNCC	5 cut(s)	10, 319, 330, 624, 861
BmrFI	CCNGG	3 cut(s)	604, 871, 993
BmsI	GCATC	3 cut(s)	82, 127, 679
BpiI	GAAGAC	1 cut(s)	1065
BpmI	CTGGAG	2 cut(s)	210, 609
Bpu10I	CCTNAGC	1 cut(s)	114
Bpu14I	TTCGAA	1 cut(s)	744
BpuMI	CCSGG	2 cut(s)	604, 871
BsaHI	GRCGYC	1 cut(s)	1037
BsaJI	CCNNGG	3 cut(s)	29, 401, 950
BsaXI	ACNNNNNCTCC	2 cut(s)	910, 940
Bsc4I	CCNNNNNNNGG	5 cut(s)	140, 619, 685, 746, 1046
Bse1I	ACTGG	3 cut(s)	93, 332, 1093
Bse3DI	GCAATG	1 cut(s)	371
BseBI	CCWGG	1 cut(s)	993
BseDI	CCNNGG	3 cut(s)	29, 401, 950
BseGI	GGATG	5 cut(s)	97, 624, 694, 813, 834
BseLI	CCNNNNNNNGG	5 cut(s)	140, 619, 685, 746, 1046
BseMI	GCAATG	1 cut(s)	371
BseMII	CTCAG	4 cut(s)	84, 342, 495, 954
BseNI	ACTGG	3 cut(s)	93, 332, 1093
BseRI	GAGGAG	6 cut(s)	15, 231, 245, 584, 836, 918
BseXI	GCAGC	3 cut(s)	766, 779, 788
Bsh1236I	CGCG	3 cut(s)	420, 704, 1018
BshFI	GGCC	4 cut(s)	133, 400, 799, 874
BshNI	GGYRCC	1 cut(s)	317
BsiHKAI	GWGCWC	1 cut(s)	154
BsiHKCI	CYCGRG	1 cut(s)	1027
BsiSI	CCGG	2 cut(s)	603, 871
BslFI	GGGAC	1 cut(s)	619
BslI	CCNNNNNNNGG	5 cut(s)	140, 619, 685, 746, 1046
BsmAI	GTCTC	2 cut(s)	993, 1028
BsmBI	CGTCTC	1 cut(s)	1028
BsmFI	GGGAC	1 cut(s)	619
BsnI	GGCC	4 cut(s)	133, 400, 799, 874
BsoBI	CYCGRG	1 cut(s)	1027
Bsp119I	TTCGAA	1 cut(s)	744
Bsp1286I	GDGCHC	1 cut(s)	154
Bsp1407I	TGTACA	1 cut(s)	633
Bsp143I	GATC	2 cut(s)	109, 480
Bsp68I	TCGCGA	1 cut(s)	704
BspACI	CCGC	4 cut(s)	397, 548, 947, 980
BspANI	GGCC	4 cut(s)	133, 400, 799, 874
BspCNI	CTCAG	4 cut(s)	83, 343, 496, 955
BspFNI	CGCG	3 cut(s)	420, 704, 1018
BspLI	GGNNCC	5 cut(s)	10, 319, 330, 624, 861
BspMAI	CTGCAG	2 cut(s)	526, 598
BspMI	ACCTGC	1 cut(s)	946
BspPI	GGATC	2 cut(s)	104, 488
BspT104I	TTCGAA	1 cut(s)	744
BspT107I	GGYRCC	1 cut(s)	317
BsrDI	GCAATG	1 cut(s)	371
BsrGI	TGTACA	1 cut(s)	633
BsrI	ACTGG	3 cut(s)	93, 332, 1093
BssECI	CCNNGG	3 cut(s)	29, 401, 950
BssMI	GATC	2 cut(s)	109, 480
BssNI	GRCGYC	1 cut(s)	1037
BssSI	CACGAG	1 cut(s)	450
BssT1I	CCWWGG	2 cut(s)	29, 401
Bst2BI	CACGAG	1 cut(s)	450
Bst2UI	CCWGG	1 cut(s)	993
Bst4CI	ACNGT	7 cut(s)	193, 255, 491, 538, 614, 638, 643
BstACI	GRCGYC	1 cut(s)	1037
BstAPI	GCANNNNNTGC	1 cut(s)	773
BstAUI	TGTACA	1 cut(s)	633
BstBI	TTCGAA	1 cut(s)	744
BstC8I	GCNNGC	3 cut(s)	322, 467, 851
BstDEI	CTNAG	5 cut(s)	70, 114, 351, 504, 963
BstDSI	CCRYGG	1 cut(s)	950
BstENI	CCTNNNNNAGG	1 cut(s)	744
BstF5I	GGATG	5 cut(s)	97, 624, 694, 813, 834
BstFNI	CGCG	3 cut(s)	420, 704, 1018
BstH2I	RGCGCY	1 cut(s)	1005
BstHHI	GCGC	2 cut(s)	1004, 1018
BstKTI	GATC	2 cut(s)	112, 483
BstMAI	GTCTC	2 cut(s)	993, 1028
BstMBI	GATC	2 cut(s)	109, 480
BstMWI	GCNNNNNNNGC	2 cut(s)	773, 776
BstNI	CCWGG	1 cut(s)	993
BstNSI	RCATGY	3 cut(s)	39, 397, 754
BstSCI	CCNGG	3 cut(s)	602, 869, 991
BstSFI	CTRYAG	2 cut(s)	522, 594
BstUI	CGCG	3 cut(s)	420, 704, 1018
BstV1I	GCAGC	3 cut(s)	766, 779, 788
BstV2I	GAAGAC	1 cut(s)	1065
BsuRI	GGCC	4 cut(s)	133, 400, 799, 874
BtgI	CCRYGG	1 cut(s)	950
BtgZI	GCGATG	1 cut(s)	470
BtsCI	GGATG	5 cut(s)	97, 624, 694, 813, 834
BtsIMutI	CAGTG	2 cut(s)	960, 1100
BtuMI	TCGCGA	1 cut(s)	704
BveI	ACCTGC	1 cut(s)	946
Cac8I	GCNNGC	3 cut(s)	322, 467, 851
CfoI	GCGC	2 cut(s)	1004, 1018
Cfr13I	GGNCC	2 cut(s)	131, 859
CseI	GACGC	1 cut(s)	1045
Csp6I	GTAC	4 cut(s)	369, 634, 639, 996
CviAII	CATG	7 cut(s)	13, 36, 155, 394, 476, 751, 846
CviQI	GTAC	4 cut(s)	369, 634, 639, 996
DdeI	CTNAG	5 cut(s)	70, 114, 351, 504, 963
DpnI	GATC	2 cut(s)	111, 482
DpnII	GATC	2 cut(s)	109, 480
DraI	TTTAAA	1 cut(s)	787
DraIII	CACNNNGTG	1 cut(s)	685
EaeI	YGGCCR	1 cut(s)	398
EciI	GGCGGA	1 cut(s)	936
Ecl136II	GAGCTC	1 cut(s)	152
Eco130I	CCWWGG	2 cut(s)	29, 401
Eco147I	AGGCCT	1 cut(s)	799
Eco24I	GRGCYC	1 cut(s)	154
Eco47I	GGWCC	1 cut(s)	859
Eco53kI	GAGCTC	1 cut(s)	152
Eco88I	CYCGRG	1 cut(s)	1027
EcoICRI	GAGCTC	1 cut(s)	152
EcoNI	CCTNNNNNAGG	1 cut(s)	744
EcoO109I	RGGNCCY	1 cut(s)	859
EcoRII	CCWGG	1 cut(s)	991
EcoT14I	CCWWGG	2 cut(s)	29, 401
EcoT38I	GRGCYC	1 cut(s)	154
ErhI	CCWWGG	2 cut(s)	29, 401
Esp3I	CGTCTC	1 cut(s)	1028
FaeI	CATG	7 cut(s)	16, 39, 158, 397, 479, 754, 849
FalI	AAGNNNNNCTT	2 cut(s)	107, 139
FaqI	GGGAC	1 cut(s)	619
FatI	CATG	7 cut(s)	12, 35, 154, 393, 475, 750, 845
Fnu4HI	GCNGC	5 cut(s)	398, 768, 777, 780, 980
FokI	GGATG	5 cut(s)	104, 631, 701, 800, 821
FriOI	GRGCYC	1 cut(s)	154
Fsp4HI	GCNGC	5 cut(s)	398, 768, 777, 780, 980
FspBI	CTAG	3 cut(s)	440, 801, 905
GlaI	GCGC	2 cut(s)	1003, 1017
GluI	GCNGC	5 cut(s)	398, 768, 777, 780, 980
GsuI	CTGGAG	2 cut(s)	210, 609
HaeII	RGCGCY	1 cut(s)	1005
HaeIII	GGCC	4 cut(s)	133, 400, 799, 874
HapII	CCGG	2 cut(s)	603, 871
HgaI	GACGC	1 cut(s)	1045
HhaI	GCGC	2 cut(s)	1004, 1018
Hin1I	GRCGYC	1 cut(s)	1037
Hin1II	CATG	7 cut(s)	16, 39, 158, 397, 479, 754, 849
Hin6I	GCGC	2 cut(s)	1002, 1016
HinP1I	GCGC	2 cut(s)	1002, 1016
HinfI	GANTC	4 cut(s)	50, 572, 972, 986
HpaII	CCGG	2 cut(s)	603, 871
HphI	GGTGA	2 cut(s)	155, 352
Hpy188I	TCNGA	2 cut(s)	86, 808
Hpy188III	TCNNGA	6 cut(s)	227, 241, 282, 517, 626, 703
HpyAV	CCTTC	3 cut(s)	242, 740, 1016
HpyCH4III	ACNGT	7 cut(s)	193, 255, 491, 538, 614, 638, 643
HpyCH4V	TGCA	7 cut(s)	197, 324, 469, 524, 596, 727, 776
HpyF10VI	GCNNNNNNNGC	2 cut(s)	773, 776
HpyF3I	CTNAG	5 cut(s)	70, 114, 351, 504, 963
Hsp92I	GRCGYC	1 cut(s)	1037
Hsp92II	CATG	7 cut(s)	16, 39, 158, 397, 479, 754, 849
HspAI	GCGC	2 cut(s)	1002, 1016
Kzo9I	GATC	2 cut(s)	109, 480
LmnI	GCTCC	3 cut(s)	149, 328, 628
Lsp1109I	GCAGC	3 cut(s)	766, 779, 788
LweI	GCATC	3 cut(s)	82, 127, 679
MaeI	CTAG	3 cut(s)	440, 801, 905
MaeIII	GTNAC	2 cut(s)	346, 643
MalI	GATC	2 cut(s)	111, 482
MboI	GATC	2 cut(s)	109, 480
MboII	GAAGA	2 cut(s)	1070, 1072
MhlI	GDGCHC	1 cut(s)	154
MluCI	AATT	8 cut(s)	138, 198, 298, 542, 734, 877, 891, 1043
MluI	ACGCGT	1 cut(s)	418
MlyI	GAGTC	3 cut(s)	581, 981, 995
MmeI	TCCRAC	1 cut(s)	596
MseI	TTAA	6 cut(s)	201, 540, 578, 650, 786, 1089
MslI	CAYNNNNRTG	1 cut(s)	474
MspA1I	CMGCKG	2 cut(s)	74, 779
MspI	CCGG	2 cut(s)	603, 871
MspR9I	CCNGG	3 cut(s)	604, 871, 993
MvaI	CCWGG	1 cut(s)	993
MvnI	CGCG	3 cut(s)	420, 704, 1018
MwoI	GCNNNNNNNGC	2 cut(s)	773, 776
NciI	CCSGG	2 cut(s)	604, 871
NdeII	GATC	2 cut(s)	109, 480
NlaIII	CATG	7 cut(s)	16, 39, 158, 397, 479, 754, 849
NlaIV	GGNNCC	5 cut(s)	10, 319, 330, 624, 861
NruI	TCGCGA	1 cut(s)	704
NspI	RCATGY	3 cut(s)	39, 397, 754
NspV	TTCGAA	1 cut(s)	744
PceI	AGGCCT	1 cut(s)	799
PciI	ACATGT	1 cut(s)	35
PfeI	GAWTC	1 cut(s)	50
PflMI	CCANNNNNTGG	2 cut(s)	140, 685
PkrI	GCNGC	5 cut(s)	399, 769, 778, 781, 981
PleI	GAGTC	3 cut(s)	580, 980, 994
PpsI	GAGTC	3 cut(s)	580, 980, 994
PpuMI	RGGWCCY	1 cut(s)	859
PscI	ACATGT	1 cut(s)	35
Psp124BI	GAGCTC	1 cut(s)	154
Psp5II	RGGWCCY	1 cut(s)	859
Psp6I	CCWGG	1 cut(s)	991
PspGI	CCWGG	1 cut(s)	991
PspN4I	GGNNCC	5 cut(s)	10, 319, 330, 624, 861
PspPI	GGNCC	2 cut(s)	131, 859
PspPPI	RGGWCCY	1 cut(s)	859
PstI	CTGCAG	2 cut(s)	526, 598
PvuII	CAGCTG	2 cut(s)	74, 779
RruI	TCGCGA	1 cut(s)	704
RsaI	GTAC	4 cut(s)	370, 635, 640, 997
RsaNI	GTAC	4 cut(s)	369, 634, 639, 996
RseI	CAYNNNNRTG	1 cut(s)	474
SacI	GAGCTC	1 cut(s)	154
SaqAI	TTAA	6 cut(s)	201, 540, 578, 650, 786, 1089
SatI	GCNGC	5 cut(s)	398, 768, 777, 780, 980
Sau3AI	GATC	2 cut(s)	109, 480
Sau96I	GGNCC	2 cut(s)	131, 859
ScaI	AGTACT	1 cut(s)	640
SchI	GAGTC	3 cut(s)	581, 981, 995
ScrFI	CCNGG	3 cut(s)	604, 871, 993
SduI	GDGCHC	1 cut(s)	154
SfaNI	GCATC	3 cut(s)	82, 127, 679
SfcI	CTRYAG	2 cut(s)	522, 594
SfuI	TTCGAA	1 cut(s)	744
SinI	GGWCC	1 cut(s)	859
SmiMI	CAYNNNNRTG	1 cut(s)	474
Sse9I	AATT	8 cut(s)	138, 198, 298, 542, 734, 877, 891, 1043
SseBI	AGGCCT	1 cut(s)	799
SsiI	CCGC	4 cut(s)	397, 548, 947, 980
SspI	AATATT	1 cut(s)	383
SspMI	CTAG	3 cut(s)	440, 801, 905
SstI	GAGCTC	1 cut(s)	154
StuI	AGGCCT	1 cut(s)	799
StyD4I	CCNGG	3 cut(s)	602, 869, 991
StyI	CCWWGG	2 cut(s)	29, 401
TaaI	ACNGT	7 cut(s)	193, 255, 491, 538, 614, 638, 643
TaqI	TCGA	2 cut(s)	281, 744
TasI	AATT	8 cut(s)	138, 198, 298, 542, 734, 877, 891, 1043
TatI	WGTACW	2 cut(s)	633, 638
TauI	GCSGC	2 cut(s)	400, 982
TfiI	GAWTC	1 cut(s)	50
Tru1I	TTAA	6 cut(s)	201, 540, 578, 650, 786, 1089
Tru9I	TTAA	6 cut(s)	201, 540, 578, 650, 786, 1089
TscAI	CASTG	2 cut(s)	967, 1100
TseI	GCWGC	3 cut(s)	767, 776, 779
TspDTI	ATGAA	2 cut(s)	200, 834
TspGWI	ACGGA	1 cut(s)	967
TspRI	CASTG	2 cut(s)	967, 1100
Van91I	CCANNNNNTGG	2 cut(s)	140, 685
VpaK11BI	GGWCC	1 cut(s)	859
XagI	CCTNNNNNAGG	1 cut(s)	744
XapI	RAATTY	1 cut(s)	298
XceI	RCATGY	3 cut(s)	39, 397, 754
XspI	CTAG	3 cut(s)	440, 801, 905
ZrmI	AGTACT	1 cut(s)	640

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.