Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr6

Orthogroup ID

OG0010690

Physical Location & Seq

Genomic Coordinates Reverse (-)

19473733 .. 19475535

Gene Structure 1803 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom06g14830.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 831 bp

ATGTTGTCGAGAGTTCAACATAAAAATTTAGTGAAGTTTATTGGTGCCTGCAAGGAGCCAGTAATGGTGATAGTTACTGAGCTTTTGTTGGGAGGTACATTGCGCAAATGTTGTCTAAACATGCGGCCGAGGTGCTTGGACATACGCGTTGCTGTTGGTTTCGCATTGGATATTGCTCGTGCGATGGAGTGCTTGCACTCTCATGGGATCATACACCGTGATTTGAAGCCTGAAAACTTGCTCTTGACTGCAGACCACAAAACAGTTAAATTAGCGGATTTTGGGTTGGCAAGAGAAGAGTCATTAACAGAGATGATGACTGCAGAAACTGGGACATACCGTTGGATGGCTCCGGAGTTGTACAGTACTGTTACATTAAGGCAAGGAGAGGGAAAGCATTACAACCACAAAGTGGACGCGTATAGCTTCGCAATTGTTTTGTGGGAACTCTTACACAACAAATTGCCTTTCGAAGGCATGTCAAATCTCCAGGCAGCATATGCAGCTGCATTTAAAAATGTGAGGCCTAGTTCTGAGAACATCCCTGAGGAGTTGAACATCATCCTAACTTCATGCTGGCAGGAGGACCCGAATGCTCGGCCTAATTTCAGCCAAATAATTCAAATGCTACTCGATTTTCTTTACACCATATCTCCTCCCGAACCTGTCATTCCATCACGGATGTTCACTGAGAACACTGTCTTGCCACCAGAGTCTCCTGGTACAAGCGCCTTGATGGCAGCACGCGAAGGCTCAGGGGAGACGCCTAAATTAGGAGAAATGGAAGACAAGCCAAAAGGTTTTTTCTTCTGCTTTAACCAGTGTTATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0035556 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase_Tyr

Protein Analysis

277

Amino Acids

31.11

Weight (kDa)

6.09

Isoelectric Point (pI)

53.25

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010690)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G50180
fragaria_vesca	FvH4_5g06280 FvH4_5g06280 FvH4_5g06280 FvH4_5g06280
malus_domestica	MD06G1165800.v1.1 MD14G1171600.v1.1
prunus_persica	Prupe.5G165700_v2.0.a1 Prupe.5G165700_v2.0.a1
pyrus_communis	pycom06g14830 pycom14g14330
rosa_chinensis	RchiOBHm_Chr7g0192581
rosa_laevigata	RLG00000004350
rosa_rugosa	Rorug07G0002300 Rorug07G0002400
rosa_samantha	Rh7AG126800 Rh7BG129000 Rh7CG130900 Rh7DG130200
rosa_wichuraiana	Rw7G010900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	104
AccB1I	GGYRCC	1 cut(s)	44
AccB7I	CCANNNNNTGG	1 cut(s)	412
AccII	CGCG	3 cut(s)	147, 419, 747
AccIII	TCCGGA	1 cut(s)	352
AciI	CCGC	2 cut(s)	124, 275
AclWI	GGATC	1 cut(s)	215
AcoI	YGGCCR	1 cut(s)	125
AcsI	RAATTY	1 cut(s)	25
AcyI	GRCGYC	1 cut(s)	764
AdeI	CACNNNGTG	1 cut(s)	412
AfaI	GTAC	4 cut(s)	97, 362, 367, 724
AfiI	CCNNNNNNNGG	4 cut(s)	346, 412, 473, 773
AflIII	ACRYGT	2 cut(s)	145, 417
AgsI	TTSAA	4 cut(s)	17, 226, 556, 623
AjnI	CCWGG	2 cut(s)	489, 718
AluBI	AGCT	3 cut(s)	82, 426, 506
AluI	AGCT	3 cut(s)	82, 426, 506
Alw26I	GTCTC	2 cut(s)	720, 755
AlwI	GGATC	1 cut(s)	215
AlwNI	CAGNNNCTG	1 cut(s)	329
Aor13HI	TCCGGA	1 cut(s)	352
AoxI	GGCC	3 cut(s)	125, 524, 599
ApeKI	GCWGC	4 cut(s)	494, 503, 506, 740
ApoI	RAATTY	1 cut(s)	25
AspLEI	GCGC	2 cut(s)	105, 731
AspS9I	GGNCC	1 cut(s)	586
AsuHPI	GGTGA	1 cut(s)	79
AsuII	TTCGAA	1 cut(s)	471
AvaII	GGWCC	1 cut(s)	586
AxyI	CCTNAGG	1 cut(s)	546
BanI	GGYRCC	1 cut(s)	44
BauI	CACGAG	1 cut(s)	177
BbsI	GAAGAC	1 cut(s)	792
BbvI	GCAGC	4 cut(s)	493, 506, 515, 752
BccI	CCATC	4 cut(s)	178, 340, 682, 730
BciT130I	CCWGG	2 cut(s)	491, 720
BcoDI	GTCTC	2 cut(s)	720, 755
BfaI	CTAG	1 cut(s)	528
BfmI	CTRYAG	2 cut(s)	249, 321
BfoI	RGCGCY	1 cut(s)	732
BglI	GCCNNNNNGGC	1 cut(s)	737
BisI	GCNGC	5 cut(s)	125, 495, 504, 507, 741
BlsI	GCNGC	5 cut(s)	126, 496, 505, 508, 742
BmcAI	AGTACT	1 cut(s)	367
Bme1390I	CCNGG	2 cut(s)	491, 720
Bme18I	GGWCC	1 cut(s)	586
BmgT120I	GGNCC	1 cut(s)	586
BmiI	GGNNCC	4 cut(s)	46, 57, 351, 588
BmrFI	CCNGG	2 cut(s)	491, 720
BmrI	ACTGGG	1 cut(s)	339
BmuI	ACTGGG	1 cut(s)	339
BpiI	GAAGAC	1 cut(s)	792
BpmI	CTGGAG	1 cut(s)	473
Bpu10I	CCTNAGC	1 cut(s)	754
Bpu14I	TTCGAA	1 cut(s)	471
BsaHI	GRCGYC	1 cut(s)	764
BsaJI	CCNNGG	1 cut(s)	128
BsaWI	WCCGGW	1 cut(s)	352
BsaXI	ACNNNNNCTCC	2 cut(s)	637, 667
Bsc4I	CCNNNNNNNGG	4 cut(s)	346, 412, 473, 773
Bse1I	ACTGG	3 cut(s)	59, 334, 820
Bse21I	CCTNAGG	1 cut(s)	546
Bse3DI	GCAATG	1 cut(s)	98
BseAI	TCCGGA	1 cut(s)	352
BseBI	CCWGG	2 cut(s)	491, 720
BseDI	CCNNGG	1 cut(s)	128
BseGI	GGATG	4 cut(s)	351, 540, 561, 687
BseLI	CCNNNNNNNGG	4 cut(s)	346, 412, 473, 773
BseMI	GCAATG	1 cut(s)	98
BseMII	CTCAG	5 cut(s)	69, 525, 537, 681, 768
BseNI	ACTGG	3 cut(s)	59, 334, 820
BseRI	GAGGAG	2 cut(s)	563, 645
BseX3I	CGGCCG	1 cut(s)	125
BseXI	GCAGC	4 cut(s)	493, 506, 515, 752
Bsh1236I	CGCG	3 cut(s)	147, 419, 747
Bsh1285I	CGRYCG	1 cut(s)	128
BshFI	GGCC	3 cut(s)	127, 526, 601
BshNI	GGYRCC	1 cut(s)	44
BsiEI	CGRYCG	1 cut(s)	128
BsiSI	CCGG	1 cut(s)	353
BslFI	GGGAC	1 cut(s)	346
BslI	CCNNNNNNNGG	4 cut(s)	346, 412, 473, 773
BsmAI	GTCTC	2 cut(s)	720, 755
BsmBI	CGTCTC	1 cut(s)	755
BsmFI	GGGAC	1 cut(s)	346
BsmI	GAATGC	1 cut(s)	598
BsnI	GGCC	3 cut(s)	127, 526, 601
Bsp119I	TTCGAA	1 cut(s)	471
Bsp13I	TCCGGA	1 cut(s)	352
Bsp1407I	TGTACA	1 cut(s)	360
Bsp143I	GATC	1 cut(s)	207
BspACI	CCGC	2 cut(s)	124, 275
BspANI	GGCC	3 cut(s)	127, 526, 601
BspCNI	CTCAG	5 cut(s)	70, 526, 538, 682, 767
BspEI	TCCGGA	1 cut(s)	352
BspFNI	CGCG	3 cut(s)	147, 419, 747
BspLI	GGNNCC	4 cut(s)	46, 57, 351, 588
BspMAI	CTGCAG	2 cut(s)	253, 325
BspPI	GGATC	1 cut(s)	215
BspT104I	TTCGAA	1 cut(s)	471
BspT107I	GGYRCC	1 cut(s)	44
BsrDI	GCAATG	1 cut(s)	98
BsrGI	TGTACA	1 cut(s)	360
BsrI	ACTGG	3 cut(s)	59, 334, 820
BssECI	CCNNGG	1 cut(s)	128
BssMI	GATC	1 cut(s)	207
BssNI	GRCGYC	1 cut(s)	764
BssSI	CACGAG	1 cut(s)	177
Bst2BI	CACGAG	1 cut(s)	177
Bst2UI	CCWGG	2 cut(s)	491, 720
Bst4CI	ACNGT	6 cut(s)	218, 265, 341, 365, 370, 700
Bst6I	CTCTTC	1 cut(s)	291
BstACI	GRCGYC	1 cut(s)	764
BstAPI	GCANNNNNTGC	1 cut(s)	500
BstAUI	TGTACA	1 cut(s)	360
BstBI	TTCGAA	1 cut(s)	471
BstC8I	GCNNGC	4 cut(s)	49, 194, 578, 745
BstDEI	CTNAG	5 cut(s)	78, 534, 546, 690, 754
BstENI	CCTNNNNNAGG	2 cut(s)	471, 771
BstF5I	GGATG	4 cut(s)	351, 540, 561, 687
BstFNI	CGCG	3 cut(s)	147, 419, 747
BstH2I	RGCGCY	1 cut(s)	732
BstHHI	GCGC	2 cut(s)	105, 731
BstKTI	GATC	1 cut(s)	210
BstMAI	GTCTC	2 cut(s)	720, 755
BstMBI	GATC	1 cut(s)	207
BstMCI	CGRYCG	1 cut(s)	128
BstMWI	GCNNNNNNNGC	3 cut(s)	500, 503, 737
BstNI	CCWGG	2 cut(s)	491, 720
BstNSI	RCATGY	2 cut(s)	124, 481
BstSCI	CCNGG	2 cut(s)	489, 718
BstSFI	CTRYAG	2 cut(s)	249, 321
BstUI	CGCG	3 cut(s)	147, 419, 747
BstV1I	GCAGC	4 cut(s)	493, 506, 515, 752
BstV2I	GAAGAC	1 cut(s)	792
BstZI	CGGCCG	1 cut(s)	125
Bsu36I	CCTNAGG	1 cut(s)	546
BsuRI	GGCC	3 cut(s)	127, 526, 601
BtgZI	GCGATG	1 cut(s)	197
BtsCI	GGATG	4 cut(s)	351, 540, 561, 687
BtsIMutI	CAGTG	3 cut(s)	687, 696, 827
Cac8I	GCNNGC	4 cut(s)	49, 194, 578, 745
CaiI	CAGNNNCTG	1 cut(s)	329
CfoI	GCGC	2 cut(s)	105, 731
Cfr13I	GGNCC	1 cut(s)	586
CseI	GACGC	2 cut(s)	425, 772
Csp6I	GTAC	4 cut(s)	96, 361, 366, 723
CviAII	CATG	4 cut(s)	121, 203, 478, 573
CviQI	GTAC	4 cut(s)	96, 361, 366, 723
DdeI	CTNAG	5 cut(s)	78, 534, 546, 690, 754
DpnI	GATC	1 cut(s)	209
DpnII	GATC	1 cut(s)	207
DraI	TTTAAA	1 cut(s)	514
DraIII	CACNNNGTG	1 cut(s)	412
EaeI	YGGCCR	1 cut(s)	125
EagI	CGGCCG	1 cut(s)	125
Eam1104I	CTCTTC	1 cut(s)	291
EarI	CTCTTC	1 cut(s)	291
EclXI	CGGCCG	1 cut(s)	125
Eco147I	AGGCCT	1 cut(s)	526
Eco47I	GGWCC	1 cut(s)	586
Eco52I	CGGCCG	1 cut(s)	125
Eco81I	CCTNAGG	1 cut(s)	546
EcoNI	CCTNNNNNAGG	2 cut(s)	471, 771
EcoO109I	RGGNCCY	1 cut(s)	586
EcoRII	CCWGG	2 cut(s)	489, 718
Esp3I	CGTCTC	1 cut(s)	755
FaeI	CATG	4 cut(s)	124, 206, 481, 576
FaqI	GGGAC	1 cut(s)	346
FatI	CATG	4 cut(s)	120, 202, 477, 572
FauNDI	CATATG	1 cut(s)	499
Fnu4HI	GCNGC	5 cut(s)	125, 495, 504, 507, 741
FokI	GGATG	4 cut(s)	358, 527, 548, 694
Fsp4HI	GCNGC	5 cut(s)	125, 495, 504, 507, 741
FspBI	CTAG	1 cut(s)	528
FspI	TGCGCA	1 cut(s)	104
GlaI	GCGC	2 cut(s)	104, 730
GluI	GCNGC	5 cut(s)	125, 495, 504, 507, 741
GsuI	CTGGAG	1 cut(s)	473
HaeII	RGCGCY	1 cut(s)	732
HaeIII	GGCC	3 cut(s)	127, 526, 601
HapII	CCGG	1 cut(s)	353
HgaI	GACGC	2 cut(s)	425, 772
HhaI	GCGC	2 cut(s)	105, 731
Hin1I	GRCGYC	1 cut(s)	764
Hin1II	CATG	4 cut(s)	124, 206, 481, 576
Hin6I	GCGC	2 cut(s)	103, 729
HinP1I	GCGC	2 cut(s)	103, 729
HinfI	GANTC	2 cut(s)	299, 713
HpaII	CCGG	1 cut(s)	353
HphI	GGTGA	1 cut(s)	79
Hpy166II	GTNNAC	2 cut(s)	415, 687
Hpy188I	TCNGA	1 cut(s)	535
Hpy188III	TCNNGA	4 cut(s)	9, 244, 353, 659
Hpy8I	GTNNAC	2 cut(s)	415, 687
HpyAV	CCTTC	2 cut(s)	467, 743
HpyCH4III	ACNGT	6 cut(s)	218, 265, 341, 365, 370, 700
HpyCH4V	TGCA	6 cut(s)	51, 196, 251, 323, 503, 509
HpyF10VI	GCNNNNNNNGC	3 cut(s)	500, 503, 737
HpyF3I	CTNAG	5 cut(s)	78, 534, 546, 690, 754
Hsp92I	GRCGYC	1 cut(s)	764
Hsp92II	CATG	4 cut(s)	124, 206, 481, 576
HspAI	GCGC	2 cut(s)	103, 729
Kpn2I	TCCGGA	1 cut(s)	352
Kzo9I	GATC	1 cut(s)	207
LmnI	GCTCC	2 cut(s)	55, 355
Lsp1109I	GCAGC	4 cut(s)	493, 506, 515, 752
MaeI	CTAG	1 cut(s)	528
MaeIII	GTNAC	2 cut(s)	73, 370
MalI	GATC	1 cut(s)	209
MboI	GATC	1 cut(s)	207
MboII	GAAGA	3 cut(s)	308, 797, 799
MfeI	CAATTG	1 cut(s)	432
MluCI	AATT	7 cut(s)	25, 269, 432, 461, 604, 618, 770
MluI	ACGCGT	2 cut(s)	145, 417
MlyI	GAGTC	2 cut(s)	308, 722
MmeI	TCCRAC	1 cut(s)	323
MnlI	CCTC	7 cut(s)	86, 123, 382, 516, 541, 577, 666
MroI	TCCGGA	1 cut(s)	352
MseI	TTAA	5 cut(s)	267, 305, 377, 513, 816
MslI	CAYNNNNRTG	1 cut(s)	201
MspA1I	CMGCKG	1 cut(s)	506
MspI	CCGG	1 cut(s)	353
MspR9I	CCNGG	2 cut(s)	491, 720
MunI	CAATTG	1 cut(s)	432
Mva1269I	GAATGC	1 cut(s)	598
MvaI	CCWGG	2 cut(s)	491, 720
MvnI	CGCG	3 cut(s)	147, 419, 747
MwoI	GCNNNNNNNGC	3 cut(s)	500, 503, 737
NdeI	CATATG	1 cut(s)	499
NdeII	GATC	1 cut(s)	207
NlaIII	CATG	4 cut(s)	124, 206, 481, 576
NlaIV	GGNNCC	4 cut(s)	46, 57, 351, 588
NmeAIII	GCCGAG	2 cut(s)	153, 577
NsbI	TGCGCA	1 cut(s)	104
NspI	RCATGY	2 cut(s)	124, 481
NspV	TTCGAA	1 cut(s)	471
PceI	AGGCCT	1 cut(s)	526
PctI	GAATGC	1 cut(s)	598
PflMI	CCANNNNNTGG	1 cut(s)	412
PkrI	GCNGC	5 cut(s)	126, 496, 505, 508, 742
PleI	GAGTC	2 cut(s)	307, 721
PpsI	GAGTC	2 cut(s)	307, 721
PpuMI	RGGWCCY	1 cut(s)	586
Psp5II	RGGWCCY	1 cut(s)	586
Psp6I	CCWGG	2 cut(s)	489, 718
PspGI	CCWGG	2 cut(s)	489, 718
PspN4I	GGNNCC	4 cut(s)	46, 57, 351, 588
PspPI	GGNCC	1 cut(s)	586
PspPPI	RGGWCCY	1 cut(s)	586
PstI	CTGCAG	2 cut(s)	253, 325
PstNI	CAGNNNCTG	1 cut(s)	329
PvuII	CAGCTG	1 cut(s)	506
RsaI	GTAC	4 cut(s)	97, 362, 367, 724
RsaNI	GTAC	4 cut(s)	96, 361, 366, 723
RseI	CAYNNNNRTG	1 cut(s)	201
SaqAI	TTAA	5 cut(s)	267, 305, 377, 513, 816
SatI	GCNGC	5 cut(s)	125, 495, 504, 507, 741
Sau3AI	GATC	1 cut(s)	207
Sau96I	GGNCC	1 cut(s)	586
ScaI	AGTACT	1 cut(s)	367
SchI	GAGTC	2 cut(s)	308, 722
ScrFI	CCNGG	2 cut(s)	491, 720
SetI	ASST	7 cut(s)	84, 97, 134, 428, 508, 667, 802
SfcI	CTRYAG	2 cut(s)	249, 321
SfuI	TTCGAA	1 cut(s)	471
SinI	GGWCC	1 cut(s)	586
SmiMI	CAYNNNNRTG	1 cut(s)	201
Sse9I	AATT	7 cut(s)	25, 269, 432, 461, 604, 618, 770
SseBI	AGGCCT	1 cut(s)	526
SsiI	CCGC	2 cut(s)	124, 275
SspMI	CTAG	1 cut(s)	528
StuI	AGGCCT	1 cut(s)	526
StyD4I	CCNGG	2 cut(s)	489, 718
TaaI	ACNGT	6 cut(s)	218, 265, 341, 365, 370, 700
TaqI	TCGA	3 cut(s)	8, 471, 633
TasI	AATT	7 cut(s)	25, 269, 432, 461, 604, 618, 770
TatI	WGTACW	2 cut(s)	360, 365
TauI	GCSGC	1 cut(s)	127
Tru1I	TTAA	5 cut(s)	267, 305, 377, 513, 816
Tru9I	TTAA	5 cut(s)	267, 305, 377, 513, 816
TscAI	CASTG	3 cut(s)	694, 703, 827
TseI	GCWGC	4 cut(s)	494, 503, 506, 740
TspDTI	ATGAA	1 cut(s)	561
TspGWI	ACGGA	1 cut(s)	694
TspRI	CASTG	3 cut(s)	694, 703, 827
Van91I	CCANNNNNTGG	1 cut(s)	412
VpaK11BI	GGWCC	1 cut(s)	586
XagI	CCTNNNNNAGG	2 cut(s)	471, 771
XapI	RAATTY	1 cut(s)	25
XceI	RCATGY	2 cut(s)	124, 481
XspI	CTAG	1 cut(s)	528
ZrmI	AGTACT	1 cut(s)	367

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.