Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr14

Orthogroup ID

OG0010690

Physical Location & Seq

Genomic Coordinates Reverse (-)

17054036 .. 17056439

Gene Structure 2404 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom14g14330.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1059 bp

ATGGAATCTGGGAGTAGGTTTTACTCAGCTGATGAGTTCAGATTGGATGCCAAATGGCTGATTGATCCTAAGCATCTCTTTGTTGGACCAAGAATTGGTGAGGGAGCTCATGCCAAAGTCTATGAGGGCAAATACAAAAACCAGACTGTTGCAATTAAAGTTGTTCATAGAGGAGAAACTCCAGAGGAGATTATCAAGAAAGAAGGACGGTTTGCCAGAGAGGTTGCAATGTTGTCGAGAGTTCAGCATAAAAATTTAGTGAAGTTTATTGGTGCCTGCAAGGAGCCAGTAATGGTAATAGTTACTGAGCTTTTATTAGGAGGTACATTGCGTAAATATTGTCTAAACATGCGGCCAAGGTGCTTGGACATACGCGTTGCTGTTGGTTTCGCACTAGATATTGCGCGTGCGATGGAGTGCTTGCACTCTCATGGGATCATACACCGTGATTTGAAGCCTGAGAACTTGCTCTTGACTGCAGACCACAAAACAGTTAAATTAGCGGATTTTGGGTTGGCGAGAGAGGAGTCATTAACAGAGATGATGACTGCAGAAACCGGGACATACCGTTGGATGGCTCCAGAGTTGTACAGTACTGTTACATTAAGGCAGGGAGAGGGAAAGCATTACAACCACAAAGTGGACGCGTATAGCTTCGCGATTGTTTTGTGGGAACTCTTACACAACAAATTGCCTTTCGAAGGCATGTCAAATCTCCAAGCAGCCTATGCAGCTGCTTTTAAAAATGTGAGGCCTAGTTCCGAAAACATCCCAGAGGAGTTGAACATCATCCTAACTTCGTGCTGGCAGGAGGACCCAAACGCCCGACCTAATTTCAGCCAAATAATTCAAATGCTACTCGATTTTCTTTACACCATATCTCCTCCTAAACCTGCCATTCTGCCACGGATATTCACTGAGAACAGAGTCTTGCTGCCAGAGTCTCCTGGTACAAGCGCCTTGATGTCAGCGCGTGAAGGCTTGGGGGAGACGCCCAAATTAGGAGAAATGGAAGACAAACCAAAAGGTTTTTTCTTCTGCTTTAACCAGTGTTATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0035556 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase_Tyr

Protein Analysis

353

Amino Acids

39.93

Weight (kDa)

7.64

Isoelectric Point (pI)

43.76

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010690)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G50180
fragaria_vesca	FvH4_5g06280 FvH4_5g06280 FvH4_5g06280 FvH4_5g06280
malus_domestica	MD06G1165800.v1.1 MD14G1171600.v1.1
prunus_persica	Prupe.5G165700_v2.0.a1 Prupe.5G165700_v2.0.a1
pyrus_communis	pycom06g14830 pycom14g14330
rosa_chinensis	RchiOBHm_Chr7g0192581
rosa_laevigata	RLG00000004350
rosa_rugosa	Rorug07G0002300 Rorug07G0002400
rosa_samantha	Rh7AG126800 Rh7BG129000 Rh7CG130900 Rh7DG130200
rosa_wichuraiana	Rw7G010900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	901
AccB1I	GGYRCC	1 cut(s)	272
AccB7I	CCANNNNNTGG	2 cut(s)	95, 640
AccII	CGCG	5 cut(s)	375, 406, 647, 659, 973
AciI	CCGC	2 cut(s)	352, 503
AclWI	GGATC	2 cut(s)	59, 443
AcoI	YGGCCR	1 cut(s)	353
AcsI	RAATTY	1 cut(s)	253
AcyI	GRCGYC	1 cut(s)	992
AdeI	CACNNNGTG	1 cut(s)	640
AfaI	GTAC	4 cut(s)	325, 590, 595, 952
AfiI	CCNNNNNNNGG	5 cut(s)	95, 574, 640, 701, 1001
AflIII	ACRYGT	2 cut(s)	373, 645
AgsI	TTSAA	3 cut(s)	454, 784, 851
AjnI	CCWGG	1 cut(s)	946
AluBI	AGCT	5 cut(s)	29, 107, 310, 654, 734
AluI	AGCT	5 cut(s)	29, 107, 310, 654, 734
Alw21I	GWGCWC	1 cut(s)	109
Alw26I	GTCTC	2 cut(s)	948, 983
AlwI	GGATC	2 cut(s)	59, 443
AoxI	GGCC	2 cut(s)	353, 752
ApeKI	GCWGC	4 cut(s)	722, 731, 734, 934
ApoI	RAATTY	1 cut(s)	253
AspLEI	GCGC	3 cut(s)	406, 959, 973
AspS9I	GGNCC	2 cut(s)	86, 814
AsuC2I	CCSGG	1 cut(s)	559
AsuHPI	GGTGA	1 cut(s)	110
AsuII	TTCGAA	1 cut(s)	699
AvaII	GGWCC	2 cut(s)	86, 814
BanI	GGYRCC	1 cut(s)	272
BanII	GRGCYC	1 cut(s)	109
BbsI	GAAGAC	1 cut(s)	1020
Bbv12I	GWGCWC	1 cut(s)	109
BbvI	GCAGC	4 cut(s)	721, 734, 743, 921
BccI	CCATC	2 cut(s)	406, 568
BcgI	CGANNNNNNTGC	2 cut(s)	216, 250
BciT130I	CCWGG	1 cut(s)	948
BcnI	CCSGG	1 cut(s)	559
BcoDI	GTCTC	2 cut(s)	948, 983
BfaI	CTAG	2 cut(s)	395, 756
BfmI	CTRYAG	2 cut(s)	477, 549
BfoI	RGCGCY	1 cut(s)	960
BfuAI	ACCTGC	1 cut(s)	901
BisI	GCNGC	5 cut(s)	353, 723, 732, 735, 935
BlsI	GCNGC	5 cut(s)	354, 724, 733, 736, 936
BmcAI	AGTACT	1 cut(s)	595
Bme1390I	CCNGG	2 cut(s)	559, 948
Bme18I	GGWCC	2 cut(s)	86, 814
BmgT120I	GGNCC	2 cut(s)	86, 814
BmiI	GGNNCC	4 cut(s)	274, 285, 579, 816
BmrFI	CCNGG	2 cut(s)	559, 948
BmsI	GCATC	2 cut(s)	37, 82
BpiI	GAAGAC	1 cut(s)	1020
BpmI	CTGGAG	2 cut(s)	165, 564
Bpu10I	CCTNAGC	1 cut(s)	69
Bpu14I	TTCGAA	1 cut(s)	699
BpuMI	CCSGG	1 cut(s)	559
BsaHI	GRCGYC	1 cut(s)	992
BsaJI	CCNNGG	2 cut(s)	356, 905
BsaXI	ACNNNNNCTCC	2 cut(s)	865, 895
Bsc4I	CCNNNNNNNGG	5 cut(s)	95, 574, 640, 701, 1001
Bse1I	ACTGG	2 cut(s)	287, 1048
Bse3DI	GCAATG	2 cut(s)	234, 326
BseBI	CCWGG	1 cut(s)	948
BseDI	CCNNGG	2 cut(s)	356, 905
BseGI	GGATG	4 cut(s)	52, 579, 768, 789
BseLI	CCNNNNNNNGG	5 cut(s)	95, 574, 640, 701, 1001
BseMI	GCAATG	2 cut(s)	234, 326
BseMII	CTCAG	4 cut(s)	39, 297, 450, 909
BseNI	ACTGG	2 cut(s)	287, 1048
BseRI	GAGGAG	5 cut(s)	186, 200, 539, 791, 873
BseXI	GCAGC	4 cut(s)	721, 734, 743, 921
Bsh1236I	CGCG	5 cut(s)	375, 406, 647, 659, 973
BshFI	GGCC	2 cut(s)	355, 754
BshNI	GGYRCC	1 cut(s)	272
BsiHKAI	GWGCWC	1 cut(s)	109
BsiSI	CCGG	1 cut(s)	558
BslFI	GGGAC	1 cut(s)	574
BslI	CCNNNNNNNGG	5 cut(s)	95, 574, 640, 701, 1001
BsmAI	GTCTC	2 cut(s)	948, 983
BsmBI	CGTCTC	1 cut(s)	983
BsmFI	GGGAC	1 cut(s)	574
BsnI	GGCC	2 cut(s)	355, 754
Bsp119I	TTCGAA	1 cut(s)	699
Bsp1286I	GDGCHC	1 cut(s)	109
Bsp1407I	TGTACA	1 cut(s)	588
Bsp143I	GATC	2 cut(s)	64, 435
Bsp68I	TCGCGA	1 cut(s)	659
BspACI	CCGC	2 cut(s)	352, 503
BspANI	GGCC	2 cut(s)	355, 754
BspCNI	CTCAG	4 cut(s)	38, 298, 451, 910
BspFNI	CGCG	5 cut(s)	375, 406, 647, 659, 973
BspLI	GGNNCC	4 cut(s)	274, 285, 579, 816
BspMAI	CTGCAG	2 cut(s)	481, 553
BspMI	ACCTGC	1 cut(s)	901
BspPI	GGATC	2 cut(s)	59, 443
BspT104I	TTCGAA	1 cut(s)	699
BspT107I	GGYRCC	1 cut(s)	272
BsrDI	GCAATG	2 cut(s)	234, 326
BsrGI	TGTACA	1 cut(s)	588
BsrI	ACTGG	2 cut(s)	287, 1048
BssECI	CCNNGG	2 cut(s)	356, 905
BssMI	GATC	2 cut(s)	64, 435
BssNI	GRCGYC	1 cut(s)	992
BssT1I	CCWWGG	1 cut(s)	356
Bst2UI	CCWGG	1 cut(s)	948
Bst4CI	ACNGT	7 cut(s)	148, 210, 446, 493, 569, 593, 598
BstACI	GRCGYC	1 cut(s)	992
BstAPI	GCANNNNNTGC	1 cut(s)	728
BstAUI	TGTACA	1 cut(s)	588
BstBI	TTCGAA	1 cut(s)	699
BstC8I	GCNNGC	4 cut(s)	277, 408, 422, 806
BstDEI	CTNAG	5 cut(s)	25, 69, 306, 459, 918
BstDSI	CCRYGG	1 cut(s)	905
BstENI	CCTNNNNNAGG	1 cut(s)	699
BstF5I	GGATG	4 cut(s)	52, 579, 768, 789
BstFNI	CGCG	5 cut(s)	375, 406, 647, 659, 973
BstH2I	RGCGCY	1 cut(s)	960
BstHHI	GCGC	3 cut(s)	406, 959, 973
BstKTI	GATC	2 cut(s)	67, 438
BstMAI	GTCTC	2 cut(s)	948, 983
BstMBI	GATC	2 cut(s)	64, 435
BstMWI	GCNNNNNNNGC	2 cut(s)	728, 731
BstNI	CCWGG	1 cut(s)	948
BstNSI	RCATGY	2 cut(s)	352, 709
BstSCI	CCNGG	2 cut(s)	557, 946
BstSFI	CTRYAG	2 cut(s)	477, 549
BstUI	CGCG	5 cut(s)	375, 406, 647, 659, 973
BstV1I	GCAGC	4 cut(s)	721, 734, 743, 921
BstV2I	GAAGAC	1 cut(s)	1020
BsuRI	GGCC	2 cut(s)	355, 754
BtgI	CCRYGG	1 cut(s)	905
BtgZI	GCGATG	1 cut(s)	425
BtsCI	GGATG	4 cut(s)	52, 579, 768, 789
BtsIMutI	CAGTG	2 cut(s)	915, 1055
BtuMI	TCGCGA	1 cut(s)	659
BveI	ACCTGC	1 cut(s)	901
Cac8I	GCNNGC	4 cut(s)	277, 408, 422, 806
CfoI	GCGC	3 cut(s)	406, 959, 973
Cfr13I	GGNCC	2 cut(s)	86, 814
CseI	GACGC	2 cut(s)	653, 1000
Csp6I	GTAC	4 cut(s)	324, 589, 594, 951
CviAII	CATG	4 cut(s)	110, 349, 431, 706
CviQI	GTAC	4 cut(s)	324, 589, 594, 951
DdeI	CTNAG	5 cut(s)	25, 69, 306, 459, 918
DpnI	GATC	2 cut(s)	66, 437
DpnII	GATC	2 cut(s)	64, 435
DraI	TTTAAA	1 cut(s)	742
DraIII	CACNNNGTG	1 cut(s)	640
EaeI	YGGCCR	1 cut(s)	353
Ecl136II	GAGCTC	1 cut(s)	107
Eco130I	CCWWGG	1 cut(s)	356
Eco147I	AGGCCT	1 cut(s)	754
Eco24I	GRGCYC	1 cut(s)	109
Eco47I	GGWCC	2 cut(s)	86, 814
Eco53kI	GAGCTC	1 cut(s)	107
EcoICRI	GAGCTC	1 cut(s)	107
EcoNI	CCTNNNNNAGG	1 cut(s)	699
EcoO109I	RGGNCCY	1 cut(s)	814
EcoRII	CCWGG	1 cut(s)	946
EcoT14I	CCWWGG	1 cut(s)	356
EcoT38I	GRGCYC	1 cut(s)	109
ErhI	CCWWGG	1 cut(s)	356
Esp3I	CGTCTC	1 cut(s)	983
FaeI	CATG	4 cut(s)	113, 352, 434, 709
FalI	AAGNNNNNCTT	2 cut(s)	62, 94
FaqI	GGGAC	1 cut(s)	574
FatI	CATG	4 cut(s)	109, 348, 430, 705
Fnu4HI	GCNGC	5 cut(s)	353, 723, 732, 735, 935
FokI	GGATG	4 cut(s)	59, 586, 755, 776
FriOI	GRGCYC	1 cut(s)	109
Fsp4HI	GCNGC	5 cut(s)	353, 723, 732, 735, 935
FspBI	CTAG	2 cut(s)	395, 756
GlaI	GCGC	3 cut(s)	405, 958, 972
GluI	GCNGC	5 cut(s)	353, 723, 732, 735, 935
GsuI	CTGGAG	2 cut(s)	165, 564
HaeII	RGCGCY	1 cut(s)	960
HaeIII	GGCC	2 cut(s)	355, 754
HapII	CCGG	1 cut(s)	558
HgaI	GACGC	2 cut(s)	653, 1000
HhaI	GCGC	3 cut(s)	406, 959, 973
Hin1I	GRCGYC	1 cut(s)	992
Hin1II	CATG	4 cut(s)	113, 352, 434, 709
Hin6I	GCGC	3 cut(s)	404, 957, 971
HinP1I	GCGC	3 cut(s)	404, 957, 971
HinfI	GANTC	4 cut(s)	5, 527, 927, 941
HpaII	CCGG	1 cut(s)	558
HphI	GGTGA	1 cut(s)	110
Hpy166II	GTNNAC	1 cut(s)	643
Hpy188I	TCNGA	2 cut(s)	41, 763
Hpy188III	TCNNGA	6 cut(s)	182, 196, 237, 472, 581, 658
Hpy8I	GTNNAC	1 cut(s)	643
HpyAV	CCTTC	3 cut(s)	197, 695, 971
HpyCH4III	ACNGT	7 cut(s)	148, 210, 446, 493, 569, 593, 598
HpyCH4V	TGCA	7 cut(s)	152, 227, 279, 424, 479, 551, 731
HpyF10VI	GCNNNNNNNGC	2 cut(s)	728, 731
HpyF3I	CTNAG	5 cut(s)	25, 69, 306, 459, 918
Hsp92I	GRCGYC	1 cut(s)	992
Hsp92II	CATG	4 cut(s)	113, 352, 434, 709
HspAI	GCGC	3 cut(s)	404, 957, 971
Kzo9I	GATC	2 cut(s)	64, 435
LmnI	GCTCC	3 cut(s)	104, 283, 583
Lsp1109I	GCAGC	4 cut(s)	721, 734, 743, 921
LweI	GCATC	2 cut(s)	37, 82
MaeI	CTAG	2 cut(s)	395, 756
MaeIII	GTNAC	2 cut(s)	301, 598
MalI	GATC	2 cut(s)	66, 437
MboI	GATC	2 cut(s)	64, 435
MboII	GAAGA	2 cut(s)	1025, 1027
MhlI	GDGCHC	1 cut(s)	109
MluCI	AATT	8 cut(s)	93, 153, 253, 497, 689, 832, 846, 998
MluI	ACGCGT	2 cut(s)	373, 645
MlyI	GAGTC	3 cut(s)	536, 936, 950
MmeI	TCCRAC	2 cut(s)	64, 551
MseI	TTAA	6 cut(s)	156, 495, 533, 605, 741, 1044
MslI	CAYNNNNRTG	1 cut(s)	429
MspA1I	CMGCKG	2 cut(s)	29, 734
MspI	CCGG	1 cut(s)	558
MspR9I	CCNGG	2 cut(s)	559, 948
MvaI	CCWGG	1 cut(s)	948
MvnI	CGCG	5 cut(s)	375, 406, 647, 659, 973
MwoI	GCNNNNNNNGC	2 cut(s)	728, 731
NciI	CCSGG	1 cut(s)	559
NdeII	GATC	2 cut(s)	64, 435
NlaIII	CATG	4 cut(s)	113, 352, 434, 709
NlaIV	GGNNCC	4 cut(s)	274, 285, 579, 816
NruI	TCGCGA	1 cut(s)	659
NspI	RCATGY	2 cut(s)	352, 709
NspV	TTCGAA	1 cut(s)	699
PceI	AGGCCT	1 cut(s)	754
PfeI	GAWTC	1 cut(s)	5
PflMI	CCANNNNNTGG	2 cut(s)	95, 640
PkrI	GCNGC	5 cut(s)	354, 724, 733, 736, 936
PleI	GAGTC	3 cut(s)	535, 935, 949
PpsI	GAGTC	3 cut(s)	535, 935, 949
PpuMI	RGGWCCY	1 cut(s)	814
Psp124BI	GAGCTC	1 cut(s)	109
Psp5II	RGGWCCY	1 cut(s)	814
Psp6I	CCWGG	1 cut(s)	946
PspGI	CCWGG	1 cut(s)	946
PspN4I	GGNNCC	4 cut(s)	274, 285, 579, 816
PspPI	GGNCC	2 cut(s)	86, 814
PspPPI	RGGWCCY	1 cut(s)	814
PstI	CTGCAG	2 cut(s)	481, 553
PvuII	CAGCTG	2 cut(s)	29, 734
RruI	TCGCGA	1 cut(s)	659
RsaI	GTAC	4 cut(s)	325, 590, 595, 952
RsaNI	GTAC	4 cut(s)	324, 589, 594, 951
RseI	CAYNNNNRTG	1 cut(s)	429
SacI	GAGCTC	1 cut(s)	109
SaqAI	TTAA	6 cut(s)	156, 495, 533, 605, 741, 1044
SatI	GCNGC	5 cut(s)	353, 723, 732, 735, 935
Sau3AI	GATC	2 cut(s)	64, 435
Sau96I	GGNCC	2 cut(s)	86, 814
ScaI	AGTACT	1 cut(s)	595
SchI	GAGTC	3 cut(s)	536, 936, 950
ScrFI	CCNGG	2 cut(s)	559, 948
SduI	GDGCHC	1 cut(s)	109
SfaNI	GCATC	2 cut(s)	37, 82
SfcI	CTRYAG	2 cut(s)	477, 549
SfuI	TTCGAA	1 cut(s)	699
SinI	GGWCC	2 cut(s)	86, 814
SmiMI	CAYNNNNRTG	1 cut(s)	429
Sse9I	AATT	8 cut(s)	93, 153, 253, 497, 689, 832, 846, 998
SseBI	AGGCCT	1 cut(s)	754
SsiI	CCGC	2 cut(s)	352, 503
SspI	AATATT	1 cut(s)	338
SspMI	CTAG	2 cut(s)	395, 756
SstI	GAGCTC	1 cut(s)	109
StuI	AGGCCT	1 cut(s)	754
StyD4I	CCNGG	2 cut(s)	557, 946
StyI	CCWWGG	1 cut(s)	356
TaaI	ACNGT	7 cut(s)	148, 210, 446, 493, 569, 593, 598
TaqI	TCGA	3 cut(s)	236, 699, 861
TasI	AATT	8 cut(s)	93, 153, 253, 497, 689, 832, 846, 998
TatI	WGTACW	2 cut(s)	588, 593
TauI	GCSGC	1 cut(s)	355
TfiI	GAWTC	1 cut(s)	5
Tru1I	TTAA	6 cut(s)	156, 495, 533, 605, 741, 1044
Tru9I	TTAA	6 cut(s)	156, 495, 533, 605, 741, 1044
TscAI	CASTG	2 cut(s)	922, 1055
TseI	GCWGC	4 cut(s)	722, 731, 734, 934
TspDTI	ATGAA	1 cut(s)	155
TspGWI	ACGGA	1 cut(s)	922
TspRI	CASTG	2 cut(s)	922, 1055
Van91I	CCANNNNNTGG	2 cut(s)	95, 640
VpaK11BI	GGWCC	2 cut(s)	86, 814
XagI	CCTNNNNNAGG	1 cut(s)	699
XapI	RAATTY	1 cut(s)	253
XceI	RCATGY	2 cut(s)	352, 709
XspI	CTAG	2 cut(s)	395, 756
ZrmI	AGTACT	1 cut(s)	595

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.