Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr14

Orthogroup ID

OG0010667

Physical Location & Seq

Genomic Coordinates Reverse (-)

27605373 .. 27608528

Gene Structure 3156 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD14G1183500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2112 bp

ATGCACAGCTTCCAGCCATATGCCGCAGCCTCGGCTCGCTTCCGCAACTTCTCGACCCCATTTTCCCTAAGCAAGAAGATCCCGTGGTGGTACCAGATCCTCGACCCAGGATCCGAACGCGTGACCCAATGGAACCACATCTTCTTTGTCATATGCATCGTCGGCCTCTTCCTCGACCCCCTCTATTTCTTCTTGCCCACCACGGCTAGCGACCAAGTCGCTTGCATGCAGATCGACATGGGCCTTGGCATCTTGGTCACCTTTCTCCGTACGGTTGCCGACTTCTTCTACATTATCAATATCCTAATCAAGTTTCGAATTGCTTATATCGATCCAGGTTCTAGGGTTTTTGGGCGGGGCCAGCTCATTAAGGACCCCAGGGCTATCGCCATCCGCTACCTCAAGGGCGACTTCTCTATCGATCTTGCCGCCTCCCTACCACTCCCACAGATTGTGATTTGGTTTGTAATTCCAGCAGTGAAAAACCCAACAGCTGCTCATGCTAATCATACCCTTTCTTTAATTGTGCTCATTCAATATATTCCTCGATTTATTCAACTTTTCCCTCTCAACCGACGAATTACTAAATCGACCGGCGTTGTAGCCAAGACTGCTTGGTCAGGGGCAGCTTACAATCTCGTTCTGTTTTGTCTAATTGCACATATTGTTGGAGCTTCATGGTATGTGATGTCCATTAGACGGCAGTACGAGTGCTGGACGGGAGAATGTAAAAAGGAGGTGAATAACACACATTCTCCATCCTGTAAAATTTCGTTTCTGGATTGTGGCAGTGCCGATAACCCCGAACGAAAACTTTATCTGCAAATCACAAAAGTTCAGACTAGTTGTGATGCAGCTGGTAAGGACGAATTTGAGTTTGGAATGTTTGCGGAGGCTTTCACTAATGAGGTTGCTTCTGCATACATCATTGAAAAATATTTCTACTGCCTTTGGTGGGGTATGAGAAATTTATGTTCATACGGACAAGATATTAAGACAAGCACTTTTATCAGTGAAACCTCATTTTGCATTCTCATTGCTGTTCTTGGTCTAGTTCTCTTCTCACATCTCATGAGCCAGATGCAGACCTATCTGCAATCTGCAACGATTAGACTTGAAGAATGGCGGGTAAAAAGGAGAGACACAGAGGAGTGGATGAGGCACCGTCAGCTCCCTGCGGAGCTGCAAGAGCGTGTTCGTCGGTTTGTTCAATATAAGTGGATTGCCACAAGAGGTGTAGATGAGAAAAACATTTTGCAATCCTTGCCTGCGGATCTCCGCCGCCAGATCCAAAGGCATTTATGCCTTGCCCTTGTTCGCCGTGTACCCTTTTTCGCACAAATGGACGATCAGCTTCTAGACGCCATATGTGAACGTCTCGAGTCATCCCTGAATACCAGGAACACATACATCATCAGGGAAGGTGATCCTGTGAATGAGATGCTTTTCATCATCAGAGGGCAACTTGAGAGCTCCACAACTGATGGTGGAAGGACAGGGTTCTACAACTCAACTACCCTCAGGGCGGGCGATTTCTGCGGCGAAGAGTTGCTCACATGGGCCTTGATGCCTACATCAAGCCTCAACCTTCCATGCTCGACGCGTACGGTGAGGTCCCTAACCGAAGTTGAGGCATTTGCACTGAGAGCTGAAGACCTCAAGTTCGTTGCCACTCAATTCAAGCGCCTTCACAGCAAAAGACTGCAGCATGCTTTTCGGTACTATTCACACCAGTGGAGAACTTGGGGGGCTTGTTTTATACAAGTTGCTTGGAGAAGGTTTAGGAAGAGAAAGTTGGCAATGGAGTTGGCAATAGAGGAGGAGTACTATTACGCACATGTTTTGGAGCAAGAAGAGCTTGGCAATGGCCATGAATCTAGAGTAGGAACTAGTAGAGATTATGATGGTATAGGAGGTGCTGAGAGGTCATCGTCCGAGGCGAATAGGCAGCAGAATATTCCGCTTGGGCCGGCGATATTGGCTTCCAAATTTGCTGCAACCACCAGAAGAGGGATTCAGAAGGTGGCATCGGTTATTCAACATGATGAAACCAGCTCTAGTATGCCCAAAAAATTGTTCAAGCCAATTGAACCTGATTTTTCAGCAGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005216 GO:0005244 GO:0005249 GO:0005261 GO:0005267 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0008150 GO:0008324 GO:0009987 GO:0015075 GO:0015077 GO:0015079 GO:0015267 GO:0015318 GO:0015672 GO:0016020 GO:0016021 GO:0022803 GO:0022832 GO:0022836 GO:0022838 GO:0022839 GO:0022843 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0034220 GO:0042391 GO:0044425 GO:0044459 GO:0044464 GO:0046873 GO:0051179 GO:0051234 GO:0055085 GO:0065007 GO:0065008 GO:0071804 GO:0071805 GO:0071944 GO:0098655 GO:0098660 GO:0098662

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

Ion_trans cNMP_binding

Protein Analysis

704

Amino Acids

80.76

Weight (kDa)

9.0

Isoelectric Point (pI)

49.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ion_trans	PF00520	44 - 369	1.7e-13	Ion transport protein
cNMP_binding	PF00027	467 - 554	9.1e-08	Cyclic nucleotide-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010667)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G48010
fragaria_vesca	FvH4_5g05660
malus_domestica	MD06G1177300.v1.1 MD14G1183500.v1.1
prunus_persica	Prupe.5G176000_v2.0.a1 Prupe.5G176000_v2.0.a1
pyrus_communis	pycom14g15260
rosa_chinensis	RchiOBHm_Chr7g0193151
rosa_laevigata	RLG00000004292
rosa_multiflora	Rmu_co8354259.1_g000001 Rmu_co8396983.1_g000001 Rmu_ssc0000092.1_g000037
rosa_roxburghii	Rroxscaffold_3G00262340
rosa_rugosa	Rorug07G0008000 Rorug07G0008100
rosa_samantha	Rh7AG133100 Rh7BG134200 Rh7CG137000 Rh7DG135000
rosa_wichuraiana	Rw7G011380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	616
Acc65I	GGTACC	1 cut(s)	90
AccB1I	GGYRCC	2 cut(s)	90, 1161
AccII	CGCG	2 cut(s)	120, 1603
AclWI	GGATC	8 cut(s)	73, 91, 105, 118, 326, 1281, 1282, 1421
AcoI	YGGCCR	1 cut(s)	1867
AcsI	RAATTY	4 cut(s)	768, 869, 967, 1988
AcuI	CTGAAG	1 cut(s)	1671
AcyI	GRCGYC	1 cut(s)	1362
AfaI	GTAC	7 cut(s)	92, 271, 707, 1326, 1606, 1721, 1826
AfiI	CCNNNNNNNGG	4 cut(s)	699, 955, 1525, 2010
AflIII	ACRYGT	3 cut(s)	118, 1601, 1837
AgsI	TTSAA	9 cut(s)	536, 557, 932, 1118, 1211, 1681, 2039, 2080, 2090
AhlI	ACTAGT	2 cut(s)	842, 1889
AjnI	CCWGG	4 cut(s)	106, 334, 377, 1397
AjuI	GAANNNNNNNTTGG	6 cut(s)	861, 893, 1778, 1810, 2060, 2092
AleI	CACNNNNGTG	1 cut(s)	1732
Alw21I	GWGCWC	2 cut(s)	531, 1475
Alw26I	GTCTC	2 cut(s)	1134, 1382
AlwI	GGATC	8 cut(s)	73, 91, 105, 118, 326, 1281, 1282, 1421
Ama87I	CYCGRG	1 cut(s)	1379
AoxI	GGCC	6 cut(s)	163, 241, 358, 1560, 1867, 1967
ApeKI	GCWGC	8 cut(s)	26, 494, 626, 854, 1183, 1705, 1948, 1994
ApoI	RAATTY	4 cut(s)	768, 869, 967, 1988
ArsI	GACNNNNNNTTYG	2 cut(s)	1646, 1678
Asp718I	GGTACC	1 cut(s)	90
AspLEI	GCGC	1 cut(s)	1686
AspS9I	GGNCC	6 cut(s)	241, 358, 373, 1560, 1614, 1967
AsuHPI	GGTGA	4 cut(s)	250, 751, 1436, 1621
AsuII	TTCGAA	1 cut(s)	316
AsuNHI	GCTAGC	1 cut(s)	206
AvaI	CYCGRG	1 cut(s)	1379
AvaII	GGWCC	2 cut(s)	373, 1614
AxyI	CCTNAGG	1 cut(s)	1520
BalI	TGGCCA	1 cut(s)	1869
BamHI	GGATCC	1 cut(s)	110
BanI	GGYRCC	2 cut(s)	90, 1161
BanII	GRGCYC	1 cut(s)	1475
BbsI	GAAGAC	1 cut(s)	1659
Bbv12I	GWGCWC	2 cut(s)	531, 1475
BbvI	GCAGC	8 cut(s)	38, 481, 638, 866, 1170, 1717, 1960, 1981
BccI	CCATC	4 cut(s)	398, 766, 1478, 1898
BceAI	ACGGC	3 cut(s)	219, 716, 1305
BcgI	CGANNNNNNTGC	4 cut(s)	214, 248, 1697, 1731
BciT130I	CCWGG	4 cut(s)	108, 336, 379, 1399
BcoDI	GTCTC	2 cut(s)	1134, 1382
BcuI	ACTAGT	2 cut(s)	842, 1889
BfaI	CTAG	8 cut(s)	207, 342, 843, 1052, 1358, 1878, 1890, 2058
BfmI	CTRYAG	1 cut(s)	1703
BfoI	RGCGCY	1 cut(s)	1687
BmcAI	AGTACT	1 cut(s)	1826
Bme1390I	CCNGG	4 cut(s)	108, 336, 379, 1399
Bme18I	GGWCC	2 cut(s)	373, 1614
BmeT110I	CYCGRG	1 cut(s)	1379
BmgT120I	GGNCC	6 cut(s)	241, 358, 373, 1560, 1614, 1967
BmiI	GGNNCC	7 cut(s)	92, 112, 134, 359, 375, 1163, 1616
BmrFI	CCNGG	4 cut(s)	108, 336, 379, 1399
BmsI	GCATC	7 cut(s)	165, 258, 841, 1071, 1431, 1557, 2036
BmtI	GCTAGC	1 cut(s)	210
BpiI	GAAGAC	1 cut(s)	1659
Bpu10I	CCTNAGC	1 cut(s)	68
Bpu14I	TTCGAA	1 cut(s)	316
BpuEI	CTTGAG	3 cut(s)	386, 1487, 1643
Bsa29I	ATCGAT	2 cut(s)	330, 420
BsaHI	GRCGYC	1 cut(s)	1362
BsaJI	CCNNGG	8 cut(s)	30, 83, 106, 201, 244, 377, 378, 1935
BsaXI	ACNNNNNCTCC	2 cut(s)	739, 769
Bsc4I	CCNNNNNNNGG	4 cut(s)	699, 955, 1525, 2010
Bse118I	RCCGGY	2 cut(s)	593, 1969
Bse1I	ACTGG	1 cut(s)	1732
Bse21I	CCTNAGG	1 cut(s)	1520
Bse3DI	GCAATG	3 cut(s)	1035, 1806, 1870
BseBI	CCWGG	4 cut(s)	108, 336, 379, 1399
BseCI	ATCGAT	2 cut(s)	330, 420
BseDI	CCNNGG	8 cut(s)	30, 83, 106, 201, 244, 377, 378, 1935
BseGI	GGATG	4 cut(s)	390, 758, 1161, 1385
BseLI	CCNNNNNNNGG	4 cut(s)	699, 955, 1525, 2010
BseMI	GCAATG	3 cut(s)	1035, 1806, 1870
BseMII	CTCAG	3 cut(s)	1534, 1634, 1911
BseNI	ACTGG	1 cut(s)	1732
BseRI	GAGGAG	3 cut(s)	1163, 1832, 1835
BseXI	GCAGC	8 cut(s)	38, 481, 638, 866, 1170, 1717, 1960, 1981
Bsh1236I	CGCG	2 cut(s)	120, 1603
Bsh1285I	CGRYCG	1 cut(s)	594
BshFI	GGCC	6 cut(s)	165, 243, 360, 1562, 1869, 1969
BshNI	GGYRCC	2 cut(s)	90, 1161
BshVI	ATCGAT	2 cut(s)	330, 420
BsiEI	CGRYCG	1 cut(s)	594
BsiHKAI	GWGCWC	2 cut(s)	531, 1475
BsiHKCI	CYCGRG	1 cut(s)	1379
BsiSI	CCGG	2 cut(s)	594, 1970
BsiWI	CGTACG	2 cut(s)	269, 1604
BslFI	GGGAC	1 cut(s)	1600
BslI	CCNNNNNNNGG	4 cut(s)	699, 955, 1525, 2010
BsmAI	GTCTC	2 cut(s)	1134, 1382
BsmBI	CGTCTC	1 cut(s)	1382
BsmFI	GGGAC	1 cut(s)	1600
BsmI	GAATGC	1 cut(s)	1029
BsnI	GGCC	6 cut(s)	165, 243, 360, 1562, 1869, 1969
BsoBI	CYCGRG	1 cut(s)	1379
Bsp119I	TTCGAA	1 cut(s)	316
Bsp1286I	GDGCHC	2 cut(s)	531, 1475
BspANI	GGCC	6 cut(s)	165, 243, 360, 1562, 1869, 1969
BspCNI	CTCAG	3 cut(s)	1533, 1635, 1912
BspDI	ATCGAT	2 cut(s)	330, 420
BspFNI	CGCG	2 cut(s)	120, 1603
BspHI	TCATGA	1 cut(s)	1071
BspLI	GGNNCC	7 cut(s)	92, 112, 134, 359, 375, 1163, 1616
BspMAI	CTGCAG	1 cut(s)	1707
BspOI	GCTAGC	1 cut(s)	210
BspPI	GGATC	8 cut(s)	73, 91, 105, 118, 326, 1281, 1282, 1421
BspQI	GCTCTTC	1 cut(s)	1848
BspT104I	TTCGAA	1 cut(s)	316
BspT107I	GGYRCC	2 cut(s)	90, 1161
BsrDI	GCAATG	3 cut(s)	1035, 1806, 1870
BsrFI	RCCGGY	2 cut(s)	593, 1969
BsrI	ACTGG	1 cut(s)	1732
BssAI	RCCGGY	2 cut(s)	593, 1969
BssECI	CCNNGG	8 cut(s)	30, 83, 106, 201, 244, 377, 378, 1935
BssNI	GRCGYC	1 cut(s)	1362
BssT1I	CCWWGG	1 cut(s)	244
Bst2UI	CCWGG	4 cut(s)	108, 336, 379, 1399
Bst4CI	ACNGT	3 cut(s)	274, 1166, 1609
Bst6I	CTCTTC	6 cut(s)	173, 1064, 1539, 1781, 1848, 2002
BstACI	GRCGYC	1 cut(s)	1362
BstAPI	GCANNNNNTGC	1 cut(s)	1264
BstBI	TTCGAA	1 cut(s)	316
BstC8I	GCNNGC	9 cut(s)	37, 208, 223, 227, 362, 1269, 1528, 1710, 1971
BstDEI	CTNAG	4 cut(s)	68, 1520, 1643, 1920
BstDSI	CCRYGG	2 cut(s)	83, 201
BstEII	GGTNACC	1 cut(s)	256
BstF5I	GGATG	4 cut(s)	390, 758, 1161, 1385
BstFNI	CGCG	2 cut(s)	120, 1603
BstH2I	RGCGCY	1 cut(s)	1687
BstHHI	GCGC	1 cut(s)	1686
BstMAI	GTCTC	2 cut(s)	1134, 1382
BstMCI	CGRYCG	1 cut(s)	594
BstNI	CCWGG	4 cut(s)	108, 336, 379, 1399
BstNSI	RCATGY	3 cut(s)	229, 1712, 1841
BstPI	GGTNACC	1 cut(s)	256
BstSCI	CCNGG	4 cut(s)	106, 334, 377, 1397
BstSFI	CTRYAG	1 cut(s)	1703
BstUI	CGCG	2 cut(s)	120, 1603
BstV1I	GCAGC	8 cut(s)	38, 481, 638, 866, 1170, 1717, 1960, 1981
BstV2I	GAAGAC	1 cut(s)	1659
BstX2I	RGATCY	5 cut(s)	78, 96, 110, 1273, 1287
BstYI	RGATCY	5 cut(s)	78, 96, 110, 1273, 1287
Bsu15I	ATCGAT	2 cut(s)	330, 420
Bsu36I	CCTNAGG	1 cut(s)	1520
BsuRI	GGCC	6 cut(s)	165, 243, 360, 1562, 1869, 1969
BsuTUI	ATCGAT	2 cut(s)	330, 420
BtgI	CCRYGG	2 cut(s)	83, 201
BtsCI	GGATG	4 cut(s)	390, 758, 1161, 1385
BtsI	GCAGTG	2 cut(s)	483, 796
BtsIMutI	CAGTG	5 cut(s)	483, 796, 1018, 1640, 1739
Cac8I	GCNNGC	9 cut(s)	37, 208, 223, 227, 362, 1269, 1528, 1710, 1971
CciI	TCATGA	1 cut(s)	1071
CfoI	GCGC	1 cut(s)	1686
Cfr10I	RCCGGY	2 cut(s)	593, 1969
Cfr13I	GGNCC	6 cut(s)	241, 358, 373, 1560, 1614, 1967
ClaI	ATCGAT	2 cut(s)	330, 420
CseI	GACGC	2 cut(s)	1370, 1609
Csp6I	GTAC	7 cut(s)	91, 270, 706, 1325, 1605, 1720, 1825
CspCI	CAANNNNNGTGG	2 cut(s)	1199, 1234
CviQI	GTAC	7 cut(s)	91, 270, 706, 1325, 1605, 1720, 1825
DdeI	CTNAG	4 cut(s)	68, 1520, 1643, 1920
DrdI	GACNNNNNNGTC	1 cut(s)	616
DseDI	GACNNNNNNGTC	1 cut(s)	616
EaeI	YGGCCR	1 cut(s)	1867
Eam1104I	CTCTTC	6 cut(s)	173, 1064, 1539, 1781, 1848, 2002
EarI	CTCTTC	6 cut(s)	173, 1064, 1539, 1781, 1848, 2002
EciI	GGCGGA	1 cut(s)	1268
Ecl136II	GAGCTC	1 cut(s)	1473
Eco130I	CCWWGG	1 cut(s)	244
Eco24I	GRGCYC	1 cut(s)	1475
Eco47I	GGWCC	2 cut(s)	373, 1614
Eco53kI	GAGCTC	1 cut(s)	1473
Eco57I	CTGAAG	1 cut(s)	1671
Eco81I	CCTNAGG	1 cut(s)	1520
Eco88I	CYCGRG	1 cut(s)	1379
Eco91I	GGTNACC	1 cut(s)	256
EcoICRI	GAGCTC	1 cut(s)	1473
EcoO109I	RGGNCCY	2 cut(s)	373, 1614
EcoO65I	GGTNACC	1 cut(s)	256
EcoRII	CCWGG	4 cut(s)	106, 334, 377, 1397
EcoT14I	CCWWGG	1 cut(s)	244
EcoT22I	ATGCAT	1 cut(s)	158
EcoT38I	GRGCYC	1 cut(s)	1475
ErhI	CCWWGG	1 cut(s)	244
Esp3I	CGTCTC	1 cut(s)	1382
FalI	AAGNNNNNCTT	4 cut(s)	395, 427, 1842, 1874
FaqI	GGGAC	1 cut(s)	1600
FauI	CCCGC	3 cut(s)	348, 1119, 1519
FauNDI	CATATG	3 cut(s)	19, 152, 1367
FokI	GGATG	4 cut(s)	377, 745, 1168, 1372
FriOI	GRGCYC	1 cut(s)	1475
FspBI	CTAG	8 cut(s)	207, 342, 843, 1052, 1358, 1878, 1890, 2058
GlaI	GCGC	1 cut(s)	1685
HaeII	RGCGCY	1 cut(s)	1687
HaeIII	GGCC	6 cut(s)	165, 243, 360, 1562, 1869, 1969
HapII	CCGG	2 cut(s)	594, 1970
HgaI	GACGC	2 cut(s)	1370, 1609
HhaI	GCGC	1 cut(s)	1686
Hin1I	GRCGYC	1 cut(s)	1362
Hin6I	GCGC	1 cut(s)	1684
HinP1I	GCGC	1 cut(s)	1684
HinfI	GANTC	3 cut(s)	1382, 1874, 2014
HpaII	CCGG	2 cut(s)	594, 1970
HphI	GGTGA	4 cut(s)	250, 751, 1436, 1621
Hpy166II	GTNNAC	2 cut(s)	1325, 1373
Hpy188I	TCNGA	5 cut(s)	115, 840, 1457, 1936, 2019
Hpy188III	TCNNGA	6 cut(s)	52, 779, 1072, 1358, 1379, 1878
Hpy8I	GTNNAC	2 cut(s)	1325, 1373
Hpy99I	CGWCG	4 cut(s)	164, 579, 1203, 1603
HpyAV	CCTTC	6 cut(s)	1415, 1485, 1598, 1697, 1770, 2014
HpyCH4III	ACNGT	3 cut(s)	274, 1166, 1609
HpyCH4IV	ACGT	1 cut(s)	1375
HpyF3I	CTNAG	4 cut(s)	68, 1520, 1643, 1920
HpySE526I	ACGT	1 cut(s)	1375
Hsp92I	GRCGYC	1 cut(s)	1362
HspAI	GCGC	1 cut(s)	1684
KpnI	GGTACC	1 cut(s)	94
KroI	GCCGGC	1 cut(s)	1969
KroNI	GCCGGC	1 cut(s)	1971
LguI	GCTCTTC	1 cut(s)	1848
LmnI	GCTCC	5 cut(s)	671, 1176, 1180, 1478, 1846
Lsp1109I	GCAGC	8 cut(s)	38, 481, 638, 866, 1170, 1717, 1960, 1981
LweI	GCATC	7 cut(s)	165, 258, 841, 1071, 1431, 1557, 2036
MaeI	CTAG	8 cut(s)	207, 342, 843, 1052, 1358, 1878, 1890, 2058
MaeII	ACGT	1 cut(s)	1375
MaeIII	GTNAC	2 cut(s)	121, 256
MfeI	CAATTG	1 cut(s)	2085
MflI	RGATCY	5 cut(s)	78, 96, 110, 1273, 1287
MhlI	GDGCHC	2 cut(s)	531, 1475
MlsI	TGGCCA	1 cut(s)	1869
MluI	ACGCGT	2 cut(s)	118, 1601
MluNI	TGGCCA	1 cut(s)	1869
MlyI	GAGTC	1 cut(s)	1391
MmeI	TCCRAC	1 cut(s)	649
Mox20I	TGGCCA	1 cut(s)	1869
Mph1103I	ATGCAT	1 cut(s)	158
MroNI	GCCGGC	1 cut(s)	1969
MscI	TGGCCA	1 cut(s)	1869
MseI	TTAA	3 cut(s)	369, 521, 993
MslI	CAYNNNNRTG	1 cut(s)	1732
Msp20I	TGGCCA	1 cut(s)	1869
MspA1I	CMGCKG	2 cut(s)	494, 857
MspI	CCGG	2 cut(s)	594, 1970
MspR9I	CCNGG	4 cut(s)	108, 336, 379, 1399
MunI	CAATTG	1 cut(s)	2085
Mva1269I	GAATGC	1 cut(s)	1029
MvaI	CCWGG	4 cut(s)	108, 336, 379, 1399
MvnI	CGCG	2 cut(s)	120, 1603
NaeI	GCCGGC	1 cut(s)	1971
NdeI	CATATG	3 cut(s)	19, 152, 1367
NgoMIV	GCCGGC	1 cut(s)	1969
NheI	GCTAGC	1 cut(s)	206
NlaIV	GGNNCC	7 cut(s)	92, 112, 134, 359, 375, 1163, 1616
NmeAIII	GCCGAG	1 cut(s)	11
NmuCI	GTSAC	2 cut(s)	121, 256
NsiI	ATGCAT	1 cut(s)	158
NspI	RCATGY	3 cut(s)	229, 1712, 1841
NspV	TTCGAA	1 cut(s)	316
OliI	CACNNNNGTG	1 cut(s)	1732
PaeI	GCATGC	2 cut(s)	229, 1712
PaeR7I	CTCGAG	1 cut(s)	1379
PagI	TCATGA	1 cut(s)	1071
PasI	CCCWGGG	1 cut(s)	378
PciI	ACATGT	1 cut(s)	1837
PciSI	GCTCTTC	1 cut(s)	1848
PcsI	WCGNNNNNNNCGW	1 cut(s)	1937
PctI	GAATGC	1 cut(s)	1029
PdiI	GCCGGC	1 cut(s)	1971
PfeI	GAWTC	2 cut(s)	1874, 2014
Pfl23II	CGTACG	2 cut(s)	269, 1604
PflFI	GACNNNGTC	1 cut(s)	215
PleI	GAGTC	1 cut(s)	1390
PpsI	GAGTC	1 cut(s)	1390
PpuMI	RGGWCCY	2 cut(s)	373, 1614
PscI	ACATGT	1 cut(s)	1837
Psp124BI	GAGCTC	1 cut(s)	1475
Psp5II	RGGWCCY	2 cut(s)	373, 1614
Psp6I	CCWGG	4 cut(s)	106, 334, 377, 1397
PspEI	GGTNACC	1 cut(s)	256
PspGI	CCWGG	4 cut(s)	106, 334, 377, 1397
PspLI	CGTACG	2 cut(s)	269, 1604
PspN4I	GGNNCC	7 cut(s)	92, 112, 134, 359, 375, 1163, 1616
PspPI	GGNCC	6 cut(s)	241, 358, 373, 1560, 1614, 1967
PspPPI	RGGWCCY	2 cut(s)	373, 1614
PstI	CTGCAG	1 cut(s)	1707
PsuI	RGATCY	5 cut(s)	78, 96, 110, 1273, 1287
PsyI	GACNNNGTC	1 cut(s)	215
PvuII	CAGCTG	2 cut(s)	494, 857
RsaI	GTAC	7 cut(s)	92, 271, 707, 1326, 1606, 1721, 1826
RsaNI	GTAC	7 cut(s)	91, 270, 706, 1325, 1605, 1720, 1825
RseI	CAYNNNNRTG	1 cut(s)	1732
SacI	GAGCTC	1 cut(s)	1475
SapI	GCTCTTC	1 cut(s)	1848
SaqAI	TTAA	3 cut(s)	369, 521, 993
Sau96I	GGNCC	6 cut(s)	241, 358, 373, 1560, 1614, 1967
ScaI	AGTACT	1 cut(s)	1826
SchI	GAGTC	1 cut(s)	1391
ScrFI	CCNGG	4 cut(s)	108, 336, 379, 1399
SduI	GDGCHC	2 cut(s)	531, 1475
SfaNI	GCATC	7 cut(s)	165, 258, 841, 1071, 1431, 1557, 2036
SfcI	CTRYAG	1 cut(s)	1703
Sfr274I	CTCGAG	1 cut(s)	1379
SfuI	TTCGAA	1 cut(s)	316
SinI	GGWCC	2 cut(s)	373, 1614
SlaI	CTCGAG	1 cut(s)	1379
SmiMI	CAYNNNNRTG	1 cut(s)	1732
SmlI	CTYRAG	4 cut(s)	401, 1379, 1466, 1658
SmoI	CTYRAG	4 cut(s)	401, 1379, 1466, 1658
SpeI	ACTAGT	2 cut(s)	842, 1889
SphI	GCATGC	2 cut(s)	229, 1712
SspI	AATATT	2 cut(s)	938, 1957
SspMI	CTAG	8 cut(s)	207, 342, 843, 1052, 1358, 1878, 1890, 2058
SstI	GAGCTC	1 cut(s)	1475
StyD4I	CCNGG	4 cut(s)	106, 334, 377, 1397
StyI	CCWWGG	1 cut(s)	244
TaaI	ACNGT	3 cut(s)	274, 1166, 1609
TaiI	ACGT	1 cut(s)	1378
TatI	WGTACW	1 cut(s)	1824
TauI	GCSGC	4 cut(s)	26, 431, 1284, 1542
TfiI	GAWTC	2 cut(s)	1874, 2014
Tru1I	TTAA	3 cut(s)	369, 521, 993
Tru9I	TTAA	3 cut(s)	369, 521, 993
TscAI	CASTG	5 cut(s)	483, 796, 1018, 1647, 1739
TseFI	GTSAC	2 cut(s)	121, 256
TseI	GCWGC	8 cut(s)	26, 494, 626, 854, 1183, 1705, 1948, 1994
Tsp45I	GTSAC	2 cut(s)	121, 256
TspDTI	ATGAA	5 cut(s)	666, 966, 1438, 1887, 2061
TspGWI	ACGGA	2 cut(s)	257, 996
TspRI	CASTG	5 cut(s)	483, 796, 1018, 1647, 1739
Tth111I	GACNNNGTC	1 cut(s)	215
VpaK11BI	GGWCC	2 cut(s)	373, 1614
XapI	RAATTY	4 cut(s)	768, 869, 967, 1988
XbaI	TCTAGA	2 cut(s)	1357, 1877
XceI	RCATGY	3 cut(s)	229, 1712, 1841
XhoI	CTCGAG	1 cut(s)	1379
XspI	CTAG	8 cut(s)	207, 342, 843, 1052, 1358, 1878, 1890, 2058
ZrmI	AGTACT	1 cut(s)	1826
Zsp2I	ATGCAT	1 cut(s)	158

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.