Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0010667

Physical Location & Seq

Genomic Coordinates Forward (+)

11559754 .. 11562720

Gene Structure 2967 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ17270

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2124 bp

ATGGTGCACAGCTTCCACCCCTATACGGCGGCCTCGGCCCGCTTCCGGCAAATCTCGGTGCCCTTCAACCTGCGCAAGACAAAGCCACGGTGGTCGGAGATCTTGGACCCGGGATCCGAAACAGTGACACGGTGGAACTACATCTTCTTCGTGATCTGCATCATGGGCCTCTTCCTCGATCCCCTTTTCTTCTTCTTACCCCTCATCGGCGGAAAAGCCTGCATGGAGACCGACCTCCAAATCAGCATCTACGTCACCTCAATCCGCACAATCGCCGACTTGTTCTACATCTTCCACATTATCATCAAGTTTCGTATTGCCTTTATTGCCCCTGGCTCTAGGGTTTTCGGCCGCGGCCAGCTAGTTAAGGACCCCTGGGCCATTGCCTCGCGCTACCTCAAAAAGGACTTCTCCATTGACCTAGCCGCCTGTCTACCACTCCCCCAGATTATGATTTGGTTTGTGATTCCAGCGACGAGAAACTCGACAGCTGCTTATACTAATCATACACTTTCCTTGATCGTTCTCATTCAATACATCCCCCGATTTATTCAGCTTTTCCCTCTAAACCGGCGGATTGCTAAGAACACTGGTGTTGTGGCCAAGACTGCTTGGTCAGGGGCAGTGTACAATCTTATTCTTTTTGCGCTAACTGCACATATTGTTGGATCTTCGTGGTATGTGTTGTCCATTAAACGGCAGTACGAGTGTTGGAAACAGGAATGTGGCAAGGAACATAATGGGACACATTCTCCATCCTGTAATCTTGAGTTTCTTGATTGTAAAACTACAAATAATCGTGAACGCCAAGCTTGGTTGGAGAAAACAAACGTGAATGAGAACTGCGATGCTATAAATGATGAGGGAAAATTTCAGTTTGGAATGTTTAAAGAGGCATTCAAAAATGACGTCGCTTCTGCACCCTTCGTTAGTAAATATTTCTATTGCCTTTGGTGGGGTATGAGAAATTTATGTGCATATGGACAAGATATTGAAGTAAGCACTATGGTTGGTGAAACCTCGTTTTGCATTACCATTGCGTCAATTGGCCTCGTCCAGTTTTCACATCTCATGAGTCAGATTCAGACCTTTCTGCAATCTACGACGGCTAGACTTGAAGAGTGGAGGGTCAAAAGAAGAGACACAGAGGAGTGGATGAGGCACCGTCAACTCCCTCCAGAATTGCAAGAACGTGTGCGTCGGTTTGTTCAATATCAGTGGATTGCCACAAGAGGCGTTGATGAAAAATCCATCTTAAATTCCCTGCCTTTGGATATACGACGTCAAATTCAAAGGCATCTATGCCTTGCCCATGTTCGCCGAGTTCCCTTCTTCGCACAAATGGATGATCAGCTCTTGGACGCCATATGCGAACGCCTCAAGTCATCCTTAAATACCAGAGACACACACATCTTTCGGGAGGGTGCTCCGGTGAGTGAGATGCTTTTCATTGTCAGAGGGCAACTCGAAAGCTCCACGACTGATGGTGGAAGGACAGGATTCTTCAACTCCATCACCCTAAGAGCCGGTGACTTCTGTGGTGAAGAGTTGCTGACATGGGCCTTAATGCCTTCATCCAGTCTAAACCTTCCGGTCTCAACTCGAACTGTGAAGTCCCTCACTGAAGTCGAGGCATTTGCACTCCGAGCTGAAGACCTCAAGTATGTTGCGAGTCAATTTAAGCGCCTTCACAGCAAAAAACTGCAGCACGCATTTAGGTACTACTCCCACCAGTGGAGGACTTGGGGAGCTTGTTATATACAAGTTGCCTGGAGACGATACAAAAAGAGGAAGTTGGCGTTGGATTTGTTCAGGGAGGAGGAGTACTATTACACACATGTTTTGGACCAAGACCCTGACTATAACAATGGATCAACTAGTGGTGCAGACGACGATGACGACGACAACGACGATGAAGGTCCAACTAAGACCTCATCGCTGCGTCGTATGGCAGAGCAATTGCACATTCCACTCGGGCCTGCAATTTTGGCTTCCAAGTTTGCTGCAACCACCAAAAGAGGACTTCGGAAGGTGGCAACACGGCTTGAGCGTGAAACTAGCAGTGCCAAAATGCCCAAAAAGTTGTTTAAGCCGAACGAGCCAGATTTCTCAAAAGATAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005216 GO:0005244 GO:0005249 GO:0005261 GO:0005267 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0008150 GO:0008324 GO:0009987 GO:0015075 GO:0015077 GO:0015079 GO:0015267 GO:0015318 GO:0015672 GO:0016020 GO:0016021 GO:0022803 GO:0022832 GO:0022836 GO:0022838 GO:0022839 GO:0022843 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0034220 GO:0042391 GO:0044425 GO:0044459 GO:0044464 GO:0046873 GO:0051179 GO:0051234 GO:0055085 GO:0065007 GO:0065008 GO:0071804 GO:0071805 GO:0071944 GO:0098655 GO:0098660 GO:0098662

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

Ion_trans cNMP_binding

Protein Analysis

707

Amino Acids

81.69

Weight (kDa)

9.18

Isoelectric Point (pI)

45.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ion_trans	PF00520	45 - 371	5.6e-12	Ion transport protein
cNMP_binding	PF00027	468 - 556	4.9e-06	Cyclic nucleotide-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0010667)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G48010
fragaria_vesca	FvH4_5g05660
malus_domestica	MD06G1177300.v1.1 MD14G1183500.v1.1
prunus_persica	Prupe.5G176000_v2.0.a1 Prupe.5G176000_v2.0.a1
pyrus_communis	pycom14g15260
rosa_chinensis	RchiOBHm_Chr7g0193151
rosa_laevigata	RLG00000004292
rosa_multiflora	Rmu_co8354259.1_g000001 Rmu_co8396983.1_g000001 Rmu_ssc0000092.1_g000037
rosa_roxburghii	Rroxscaffold_3G00262340
rosa_rugosa	Rorug07G0008000 Rorug07G0008100
rosa_samantha	Rh7AG133100 Rh7BG134200 Rh7CG137000 Rh7DG135000
rosa_wichuraiana	Rw7G011380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	613
AatII	GACGTC	2 cut(s)	912, 1285
Acc16I	TGCGCA	1 cut(s)	74
Acc36I	ACCTGC	1 cut(s)	78
AccB1I	GGYRCC	2 cut(s)	58, 1161
AccI	GTMKAC	1 cut(s)	433
AccII	CGCG	2 cut(s)	354, 391
AciI	CCGC	8 cut(s)	29, 40, 210, 265, 352, 354, 426, 574
AclWI	GGATC	5 cut(s)	108, 121, 173, 676, 1879
AcoI	YGGCCR	3 cut(s)	349, 355, 600
AcsI	RAATTY	4 cut(s)	869, 967, 1258, 1287
AcuI	CTGAAG	2 cut(s)	1644, 1671
AcyI	GRCGYC	3 cut(s)	909, 1282, 1362
AfaI	GTAC	4 cut(s)	629, 704, 1721, 1826
AfiI	CCNNNNNNNGG	8 cut(s)	25, 45, 206, 403, 696, 955, 1270, 1734
AflIII	ACRYGT	2 cut(s)	1192, 1837
AgsI	TTSAA	8 cut(s)	67, 533, 901, 995, 1118, 1211, 1292, 1507
AhlI	ACTAGT	1 cut(s)	1877
AjnI	CCWGG	3 cut(s)	331, 374, 1769
AjuI	GAANNNNNNNTTGG	2 cut(s)	1784, 1816
AluBI	AGCT	9 cut(s)	12, 361, 491, 556, 812, 1354, 1473, 1649, 1751
AluI	AGCT	9 cut(s)	12, 361, 491, 556, 812, 1354, 1473, 1649, 1751
Alw21I	GWGCWC	2 cut(s)	9, 1429
Alw26I	GTCTC	5 cut(s)	221, 1134, 1395, 1600, 1768
Alw44I	GTGCAC	1 cut(s)	5
AlwI	GGATC	5 cut(s)	108, 121, 173, 676, 1879
Ama87I	CYCGRG	2 cut(s)	109, 1973
ApaLI	GTGCAC	1 cut(s)	5
ApeKI	GCWGC	4 cut(s)	491, 1705, 1939, 2003
ApoI	RAATTY	4 cut(s)	869, 967, 1258, 1287
ArsI	GACNNNNNNTTYG	2 cut(s)	894, 926
AspLEI	GCGC	4 cut(s)	75, 393, 649, 1686
AspS9I	GGNCC	9 cut(s)	37, 106, 166, 370, 378, 1560, 1846, 1919, 1976
AsuC2I	CCSGG	2 cut(s)	110, 111
AsuHPI	GGTGA	6 cut(s)	247, 1025, 1444, 1507, 1541, 1553
AvaI	CYCGRG	2 cut(s)	109, 1973
AvaII	GGWCC	4 cut(s)	106, 370, 1846, 1919
BaeGI	GKGCMC	2 cut(s)	9, 63
BalI	TGGCCA	1 cut(s)	602
BamHI	GGATCC	1 cut(s)	113
BanI	GGYRCC	2 cut(s)	58, 1161
BbsI	GAAGAC	1 cut(s)	1659
Bbv12I	GWGCWC	2 cut(s)	9, 1429
BbvI	GCAGC	4 cut(s)	478, 1717, 1926, 1990
BccI	CCATC	4 cut(s)	763, 1259, 1478, 1520
BceAI	ACGGC	4 cut(s)	42, 713, 1122, 2057
BcgI	CGANNNNNNTGC	2 cut(s)	1619, 1653
BciT130I	CCWGG	3 cut(s)	333, 376, 1771
BclI	TGATCA	1 cut(s)	1348
BcnI	CCSGG	2 cut(s)	110, 111
BcoDI	GTCTC	5 cut(s)	221, 1134, 1395, 1600, 1768
BcuI	ACTAGT	1 cut(s)	1877
BfaI	CTAG	6 cut(s)	339, 362, 422, 1110, 1878, 2058
BfmI	CTRYAG	1 cut(s)	1703
BfoI	RGCGCY	1 cut(s)	1687
BfuAI	ACCTGC	1 cut(s)	78
BglII	AGATCT	1 cut(s)	99
BisI	GCNGC	8 cut(s)	30, 352, 355, 426, 492, 1706, 1940, 2004
BlsI	GCNGC	8 cut(s)	31, 353, 356, 427, 493, 1707, 1941, 2005
BmcAI	AGTACT	1 cut(s)	1826
Bme1390I	CCNGG	5 cut(s)	110, 111, 333, 376, 1771
Bme18I	GGWCC	4 cut(s)	106, 370, 1846, 1919
BmeT110I	CYCGRG	2 cut(s)	109, 1973
BmgT120I	GGNCC	9 cut(s)	37, 106, 166, 370, 378, 1560, 1846, 1919, 1976
BmiI	GGNNCC	5 cut(s)	60, 108, 115, 372, 1163
BmrFI	CCNGG	5 cut(s)	110, 111, 333, 376, 1771
BmsI	GCATC	5 cut(s)	168, 255, 838, 1306, 1431
BpiI	GAAGAC	1 cut(s)	1659
BplI	GAGNNNNNCTC	2 cut(s)	1449, 1481
BpmI	CTGGAG	2 cut(s)	1161, 1792
BpuEI	CTTGAG	4 cut(s)	788, 1364, 1643, 2066
BpuMI	CCSGG	2 cut(s)	110, 111
BsaBI	GATNNNNATC	1 cut(s)	158
BsaHI	GRCGYC	3 cut(s)	909, 1282, 1362
BsaI	GGTCTC	2 cut(s)	221, 1600
BsaJI	CCNNGG	7 cut(s)	33, 86, 109, 331, 352, 374, 375
BsaWI	WCCGGW	2 cut(s)	1429, 1591
BsaXI	ACNNNNNCTCC	4 cut(s)	736, 766, 1808, 1838
Bsc4I	CCNNNNNNNGG	8 cut(s)	25, 45, 206, 403, 696, 955, 1270, 1734
Bse118I	RCCGGY	2 cut(s)	570, 1526
Bse1I	ACTGG	4 cut(s)	595, 1057, 1578, 1732
Bse3DI	GCAATG	2 cut(s)	381, 1035
Bse8I	GATNNNNATC	1 cut(s)	158
BseBI	CCWGG	3 cut(s)	333, 376, 1771
BseDI	CCNNGG	7 cut(s)	33, 86, 109, 331, 352, 374, 375
BseGI	GGATG	6 cut(s)	537, 755, 1161, 1351, 1385, 1574
BseJI	GATNNNNATC	1 cut(s)	158
BseLI	CCNNNNNNNGG	8 cut(s)	25, 45, 206, 403, 696, 955, 1270, 1734
BseMI	GCAATG	2 cut(s)	381, 1035
BseNI	ACTGG	4 cut(s)	595, 1057, 1578, 1732
BseRI	GAGGAG	3 cut(s)	1163, 1832, 1835
BseSI	GKGCMC	2 cut(s)	9, 63
BseX3I	CGGCCG	1 cut(s)	349
BseXI	GCAGC	4 cut(s)	478, 1717, 1926, 1990
BsgI	GTGCAG	3 cut(s)	639, 903, 1905
Bsh1236I	CGCG	2 cut(s)	354, 391
Bsh1285I	CGRYCG	1 cut(s)	352
BshNI	GGYRCC	2 cut(s)	58, 1161
BsiEI	CGRYCG	1 cut(s)	352
BsiHKAI	GWGCWC	2 cut(s)	9, 1429
BsiHKCI	CYCGRG	2 cut(s)	109, 1973
BsiSI	CCGG	6 cut(s)	46, 110, 571, 1430, 1527, 1592
BslFI	GGGAC	2 cut(s)	757, 1600
BslI	CCNNNNNNNGG	8 cut(s)	25, 45, 206, 403, 696, 955, 1270, 1734
BsmAI	GTCTC	5 cut(s)	221, 1134, 1395, 1600, 1768
BsmBI	CGTCTC	1 cut(s)	1768
BsmFI	GGGAC	2 cut(s)	757, 1600
BsmI	GAATGC	1 cut(s)	896
Bso31I	GGTCTC	2 cut(s)	221, 1600
BsoBI	CYCGRG	2 cut(s)	109, 1973
Bsp1286I	GDGCHC	3 cut(s)	9, 63, 1429
Bsp1407I	TGTACA	1 cut(s)	627
Bsp143I	GATC	8 cut(s)	99, 113, 153, 178, 519, 668, 1348, 1871
BspACI	CCGC	8 cut(s)	29, 40, 210, 265, 352, 354, 426, 574
BspFNI	CGCG	2 cut(s)	354, 391
BspHI	TCATGA	1 cut(s)	1071
BspLI	GGNNCC	5 cut(s)	60, 108, 115, 372, 1163
BspMAI	CTGCAG	1 cut(s)	1707
BspMI	ACCTGC	1 cut(s)	78
BspPI	GGATC	5 cut(s)	108, 121, 173, 676, 1879
BspT107I	GGYRCC	2 cut(s)	58, 1161
BspTNI	GGTCTC	2 cut(s)	221, 1600
BsrDI	GCAATG	2 cut(s)	381, 1035
BsrFI	RCCGGY	2 cut(s)	570, 1526
BsrGI	TGTACA	1 cut(s)	627
BsrI	ACTGG	4 cut(s)	595, 1057, 1578, 1732
BssAI	RCCGGY	2 cut(s)	570, 1526
BssECI	CCNNGG	7 cut(s)	33, 86, 109, 331, 352, 374, 375
BssMI	GATC	8 cut(s)	99, 113, 153, 178, 519, 668, 1348, 1871
BssNI	GRCGYC	3 cut(s)	909, 1282, 1362
Bst2UI	CCWGG	3 cut(s)	333, 376, 1771
Bst4CI	ACNGT	5 cut(s)	90, 124, 132, 1166, 1609
Bst6I	CTCTTC	4 cut(s)	176, 1113, 1132, 1539
BstACI	GRCGYC	3 cut(s)	909, 1282, 1362
BstAUI	TGTACA	1 cut(s)	627
BstC8I	GCNNGC	5 cut(s)	40, 220, 359, 1710, 1980
BstDEI	CTNAG	3 cut(s)	582, 1520, 1926
BstDSI	CCRYGG	2 cut(s)	86, 352
BstENI	CCTNNNNNAGG	1 cut(s)	401
BstF5I	GGATG	6 cut(s)	537, 755, 1161, 1351, 1385, 1574
BstFNI	CGCG	2 cut(s)	354, 391
BstH2I	RGCGCY	1 cut(s)	1687
BstHHI	GCGC	4 cut(s)	75, 393, 649, 1686
BstKTI	GATC	8 cut(s)	102, 116, 156, 181, 522, 671, 1351, 1874
BstMAI	GTCTC	5 cut(s)	221, 1134, 1395, 1600, 1768
BstMBI	GATC	8 cut(s)	99, 113, 153, 178, 519, 668, 1348, 1871
BstMCI	CGRYCG	1 cut(s)	352
BstMWI	GCNNNNNNNGC	9 cut(s)	35, 165, 326, 608, 653, 1646, 1692, 1988, 2098
BstNI	CCWGG	3 cut(s)	333, 376, 1771
BstNSI	RCATGY	1 cut(s)	1841
BstSCI	CCNGG	5 cut(s)	108, 109, 331, 374, 1769
BstSFI	CTRYAG	1 cut(s)	1703
BstSLI	GKGCMC	2 cut(s)	9, 63
BstUI	CGCG	2 cut(s)	354, 391
BstV1I	GCAGC	4 cut(s)	478, 1717, 1926, 1990
BstV2I	GAAGAC	1 cut(s)	1659
BstX2I	RGATCY	3 cut(s)	99, 113, 668
BstYI	RGATCY	3 cut(s)	99, 113, 668
BstZI	CGGCCG	1 cut(s)	349
BtgI	CCRYGG	2 cut(s)	86, 352
BtgZI	GCGATG	2 cut(s)	861, 1920
BtsCI	GGATG	6 cut(s)	537, 755, 1161, 1351, 1385, 1574
BtsI	GCAGTG	2 cut(s)	630, 2068
BtsIMutI	CAGTG	7 cut(s)	129, 588, 630, 1223, 1620, 1739, 2068
BveI	ACCTGC	1 cut(s)	78
Cac8I	GCNNGC	5 cut(s)	40, 220, 359, 1710, 1980
CciI	TCATGA	1 cut(s)	1071
CfoI	GCGC	4 cut(s)	75, 393, 649, 1686
Cfr10I	RCCGGY	2 cut(s)	570, 1526
Cfr13I	GGNCC	9 cut(s)	37, 106, 166, 370, 378, 1560, 1846, 1919, 1976
Cfr42I	CCGCGG	1 cut(s)	355
Cfr9I	CCCGGG	1 cut(s)	109
CseI	GACGC	4 cut(s)	1029, 1187, 1370, 1931
Csp6I	GTAC	4 cut(s)	628, 703, 1720, 1825
CspCI	CAANNNNNGTGG	2 cut(s)	1199, 1234
CviAII	CATG	6 cut(s)	163, 223, 1072, 1313, 1557, 1838
CviQI	GTAC	4 cut(s)	628, 703, 1720, 1825
DdeI	CTNAG	3 cut(s)	582, 1520, 1926
DpnI	GATC	8 cut(s)	101, 115, 155, 180, 521, 670, 1350, 1873
DpnII	GATC	8 cut(s)	99, 113, 153, 178, 519, 668, 1348, 1871
DraI	TTTAAA	1 cut(s)	889
DrdI	GACNNNNNNGTC	1 cut(s)	613
DseDI	GACNNNNNNGTC	1 cut(s)	613
EaeI	YGGCCR	3 cut(s)	349, 355, 600
EagI	CGGCCG	1 cut(s)	349
Eam1104I	CTCTTC	4 cut(s)	176, 1113, 1132, 1539
EarI	CTCTTC	4 cut(s)	176, 1113, 1132, 1539
EciI	GGCGGA	2 cut(s)	225, 589
EclXI	CGGCCG	1 cut(s)	349
Eco31I	GGTCTC	2 cut(s)	221, 1600
Eco47I	GGWCC	4 cut(s)	106, 370, 1846, 1919
Eco52I	CGGCCG	1 cut(s)	349
Eco57I	CTGAAG	2 cut(s)	1644, 1671
Eco88I	CYCGRG	2 cut(s)	109, 1973
EcoNI	CCTNNNNNAGG	1 cut(s)	401
EcoO109I	RGGNCCY	1 cut(s)	370
EcoRII	CCWGG	3 cut(s)	331, 374, 1769
Esp3I	CGTCTC	1 cut(s)	1768
FaeI	CATG	6 cut(s)	166, 226, 1075, 1316, 1560, 1841
FalI	AAGNNNNNCTT	2 cut(s)	1373, 1405
FaqI	GGGAC	2 cut(s)	757, 1600
FatI	CATG	6 cut(s)	162, 222, 1071, 1312, 1556, 1837
FauI	CCCGC	1 cut(s)	47
FauNDI	CATATG	2 cut(s)	979, 1367
FbaI	TGATCA	1 cut(s)	1348
FblI	GTMKAC	1 cut(s)	433
Fnu4HI	GCNGC	8 cut(s)	30, 352, 355, 426, 492, 1706, 1940, 2004
FokI	GGATG	6 cut(s)	524, 742, 1168, 1358, 1372, 1561
Fsp4HI	GCNGC	8 cut(s)	30, 352, 355, 426, 492, 1706, 1940, 2004
FspBI	CTAG	6 cut(s)	339, 362, 422, 1110, 1878, 2058
FspI	TGCGCA	1 cut(s)	74
GlaI	GCGC	4 cut(s)	74, 392, 648, 1685
GluI	GCNGC	8 cut(s)	30, 352, 355, 426, 492, 1706, 1940, 2004
GsuI	CTGGAG	2 cut(s)	1161, 1792
HaeII	RGCGCY	1 cut(s)	1687
HapII	CCGG	6 cut(s)	46, 110, 571, 1430, 1527, 1592
HgaI	GACGC	4 cut(s)	1029, 1187, 1370, 1931
HhaI	GCGC	4 cut(s)	75, 393, 649, 1686
Hin1I	GRCGYC	3 cut(s)	909, 1282, 1362
Hin1II	CATG	6 cut(s)	166, 226, 1075, 1316, 1560, 1841
Hin6I	GCGC	4 cut(s)	73, 391, 647, 1684
HinP1I	GCGC	4 cut(s)	73, 391, 647, 1684
HincII	GTYRAC	1 cut(s)	1169
HindII	GTYRAC	1 cut(s)	1169
HindIII	AAGCTT	1 cut(s)	810
HinfI	GANTC	5 cut(s)	466, 1075, 1081, 1500, 1672
HpaII	CCGG	6 cut(s)	46, 110, 571, 1430, 1527, 1592
HphI	GGTGA	6 cut(s)	247, 1025, 1444, 1507, 1541, 1553
Hpy166II	GTNNAC	5 cut(s)	7, 434, 628, 803, 1169
Hpy188I	TCNGA	7 cut(s)	97, 118, 1080, 1086, 1457, 1646, 2028
Hpy188III	TCNNGA	7 cut(s)	151, 767, 776, 800, 1072, 1178, 1418
Hpy8I	GTNNAC	5 cut(s)	7, 434, 628, 803, 1169
Hpy99I	CGWCG	9 cut(s)	478, 914, 1108, 1203, 1284, 1895, 1904, 1913, 1947
HpyAV	CCTTC	9 cut(s)	73, 934, 1339, 1485, 1581, 1598, 1697, 1910, 2023
HpyCH4III	ACNGT	5 cut(s)	90, 124, 132, 1166, 1609
HpyCH4IV	ACGT	5 cut(s)	252, 831, 909, 1192, 1282
HpyF10VI	GCNNNNNNNGC	9 cut(s)	35, 165, 326, 608, 653, 1646, 1692, 1988, 2098
HpyF3I	CTNAG	3 cut(s)	582, 1520, 1926
HpySE526I	ACGT	5 cut(s)	252, 831, 909, 1192, 1282
Hsp92I	GRCGYC	3 cut(s)	909, 1282, 1362
Hsp92II	CATG	6 cut(s)	166, 226, 1075, 1316, 1560, 1841
HspAI	GCGC	4 cut(s)	73, 391, 647, 1684
Ksp22I	TGATCA	1 cut(s)	1348
KspI	CCGCGG	1 cut(s)	355
Kzo9I	GATC	8 cut(s)	99, 113, 153, 178, 519, 668, 1348, 1871
LmnI	GCTCC	3 cut(s)	1432, 1478, 1748
Lsp1109I	GCAGC	4 cut(s)	478, 1717, 1926, 1990
LweI	GCATC	5 cut(s)	168, 255, 838, 1306, 1431
MaeI	CTAG	6 cut(s)	339, 362, 422, 1110, 1878, 2058
MaeII	ACGT	5 cut(s)	252, 831, 909, 1192, 1282
MaeIII	GTNAC	3 cut(s)	124, 253, 1529
MalI	GATC	8 cut(s)	101, 115, 155, 180, 521, 670, 1350, 1873
MboI	GATC	8 cut(s)	99, 113, 153, 178, 519, 668, 1348, 1871
MfeI	CAATTG	2 cut(s)	1044, 1958
MflI	RGATCY	3 cut(s)	99, 113, 668
MhlI	GDGCHC	3 cut(s)	9, 63, 1429
MlsI	TGGCCA	1 cut(s)	602
MluCI	AATT	9 cut(s)	869, 967, 1044, 1181, 1258, 1287, 1676, 1958, 1983
MluNI	TGGCCA	1 cut(s)	602
MlyI	GAGTC	2 cut(s)	1084, 1681
MmeI	TCCRAC	6 cut(s)	75, 646, 692, 798, 1782, 1946
Mox20I	TGGCCA	1 cut(s)	602
MscI	TGGCCA	1 cut(s)	602
MseI	TTAA	8 cut(s)	366, 693, 888, 1256, 1391, 1565, 1680, 2088
Msp20I	TGGCCA	1 cut(s)	602
MspA1I	CMGCKG	2 cut(s)	354, 491
MspI	CCGG	6 cut(s)	46, 110, 571, 1430, 1527, 1592
MspR9I	CCNGG	5 cut(s)	110, 111, 333, 376, 1771
MunI	CAATTG	2 cut(s)	1044, 1958
Mva1269I	GAATGC	1 cut(s)	896
MvaI	CCWGG	3 cut(s)	333, 376, 1771
MvnI	CGCG	2 cut(s)	354, 391
MwoI	GCNNNNNNNGC	9 cut(s)	35, 165, 326, 608, 653, 1646, 1692, 1988, 2098
NciI	CCSGG	2 cut(s)	110, 111
NdeI	CATATG	2 cut(s)	979, 1367
NdeII	GATC	8 cut(s)	99, 113, 153, 178, 519, 668, 1348, 1871
NlaIII	CATG	6 cut(s)	166, 226, 1075, 1316, 1560, 1841
NlaIV	GGNNCC	5 cut(s)	60, 108, 115, 372, 1163
NmeAIII	GCCGAG	2 cut(s)	14, 1346
NmuCI	GTSAC	3 cut(s)	124, 253, 1529
NsbI	TGCGCA	1 cut(s)	74
NspI	RCATGY	1 cut(s)	1841
PagI	TCATGA	1 cut(s)	1071
PasI	CCCWGGG	1 cut(s)	375
PciI	ACATGT	1 cut(s)	1837
PcsI	WCGNNNNNNNCGW	7 cut(s)	482, 1368, 1896, 1899, 1905, 1908, 2047
PctI	GAATGC	1 cut(s)	896
PfeI	GAWTC	3 cut(s)	466, 1081, 1500
PkrI	GCNGC	8 cut(s)	31, 353, 356, 427, 493, 1707, 1941, 2005
PleI	GAGTC	2 cut(s)	1083, 1680
PpsI	GAGTC	2 cut(s)	1083, 1680
PpuMI	RGGWCCY	1 cut(s)	370
PscI	ACATGT	1 cut(s)	1837
Psp5II	RGGWCCY	1 cut(s)	370
Psp6I	CCWGG	3 cut(s)	331, 374, 1769
PspGI	CCWGG	3 cut(s)	331, 374, 1769
PspN4I	GGNNCC	5 cut(s)	60, 108, 115, 372, 1163
PspPI	GGNCC	9 cut(s)	37, 106, 166, 370, 378, 1560, 1846, 1919, 1976
PspPPI	RGGWCCY	1 cut(s)	370
PstI	CTGCAG	1 cut(s)	1707
PsuI	RGATCY	3 cut(s)	99, 113, 668
PvuII	CAGCTG	1 cut(s)	491
RsaI	GTAC	4 cut(s)	629, 704, 1721, 1826
RsaNI	GTAC	4 cut(s)	628, 703, 1720, 1825
SacII	CCGCGG	1 cut(s)	355
SaqAI	TTAA	8 cut(s)	366, 693, 888, 1256, 1391, 1565, 1680, 2088
SatI	GCNGC	8 cut(s)	30, 352, 355, 426, 492, 1706, 1940, 2004
Sau3AI	GATC	8 cut(s)	99, 113, 153, 178, 519, 668, 1348, 1871
Sau96I	GGNCC	9 cut(s)	37, 106, 166, 370, 378, 1560, 1846, 1919, 1976
ScaI	AGTACT	1 cut(s)	1826
SchI	GAGTC	2 cut(s)	1084, 1681
ScrFI	CCNGG	5 cut(s)	110, 111, 333, 376, 1771
SduI	GDGCHC	3 cut(s)	9, 63, 1429
SfaNI	GCATC	5 cut(s)	168, 255, 838, 1306, 1431
SfcI	CTRYAG	1 cut(s)	1703
Sfr303I	CCGCGG	1 cut(s)	355
SgrBI	CCGCGG	1 cut(s)	355
SinI	GGWCC	4 cut(s)	106, 370, 1846, 1919
SmaI	CCCGGG	1 cut(s)	111
SmlI	CTYRAG	4 cut(s)	767, 1379, 1658, 2045
SmoI	CTYRAG	4 cut(s)	767, 1379, 1658, 2045
SpeI	ACTAGT	1 cut(s)	1877
Sse9I	AATT	9 cut(s)	869, 967, 1044, 1181, 1258, 1287, 1676, 1958, 1983
SsiI	CCGC	8 cut(s)	29, 40, 210, 265, 352, 354, 426, 574
SspI	AATATT	1 cut(s)	938
SspMI	CTAG	6 cut(s)	339, 362, 422, 1110, 1878, 2058
StyD4I	CCNGG	5 cut(s)	108, 109, 331, 374, 1769
TaaI	ACNGT	5 cut(s)	90, 124, 132, 1166, 1609
TaiI	ACGT	5 cut(s)	255, 834, 912, 1195, 1285
TaqI	TCGA	5 cut(s)	177, 485, 1467, 1603, 1629
TaqII	GACCGA	1 cut(s)	245
TasI	AATT	9 cut(s)	869, 967, 1044, 1181, 1258, 1287, 1676, 1958, 1983
TatI	WGTACW	2 cut(s)	627, 1824
TauI	GCSGC	4 cut(s)	32, 354, 357, 428
TfiI	GAWTC	3 cut(s)	466, 1081, 1500
Tru1I	TTAA	8 cut(s)	366, 693, 888, 1256, 1391, 1565, 1680, 2088
Tru9I	TTAA	8 cut(s)	366, 693, 888, 1256, 1391, 1565, 1680, 2088
TscAI	CASTG	7 cut(s)	129, 595, 630, 1223, 1627, 1739, 2068
TseFI	GTSAC	3 cut(s)	124, 253, 1529
TseI	GCWGC	4 cut(s)	491, 1705, 1939, 2003
Tsp45I	GTSAC	3 cut(s)	124, 253, 1529
TspDTI	ATGAA	4 cut(s)	1257, 1438, 1563, 1929
TspMI	CCCGGG	1 cut(s)	109
TspRI	CASTG	7 cut(s)	129, 595, 630, 1223, 1627, 1739, 2068
VneI	GTGCAC	1 cut(s)	5
VpaK11BI	GGWCC	4 cut(s)	106, 370, 1846, 1919
XagI	CCTNNNNNAGG	1 cut(s)	401
XapI	RAATTY	4 cut(s)	869, 967, 1258, 1287
XceI	RCATGY	1 cut(s)	1841
XmaI	CCCGGG	1 cut(s)	109
XmiI	GTMKAC	1 cut(s)	433
XspI	CTAG	6 cut(s)	339, 362, 422, 1110, 1878, 2058
ZraI	GACGTC	2 cut(s)	910, 1283
ZrmI	AGTACT	1 cut(s)	1826

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.