Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000092.1

Orthogroup ID

OG0010667

Physical Location & Seq

Genomic Coordinates Reverse (-)

175375 .. 178358

Gene Structure 2984 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000092.1_g000037.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1797 bp

atggtgcacagcttccacccctacacggcggcctcggcccgcttccggcaaatctcggtgcccttcaacctgcgcaagacaaagccacggtggtcggagatcttggacccgggatccgaaacagtgacacggtggaactacatcttcttcgtgatctgcatcatgggcctcttcctcgatcccctattcttcttcttacccctcatcggcggaaaagcctgcatggagaccgacctccaaatcagcatctacgtcacctccatccgcacaatcgccgacttgttctacatcttccacattatcatcaagtttcgtattgcctttattgcccctggctctagggttttcggccgcggccagctagttaaggacccctgggccattgcctcgcgctacctcaaaaaggacttctccattgacctagccgcctgtctaccactcccccagattatgatttggtttgtgattccagcgacgagaaactcgacagctgcttatactaatcatacactttccttgatcgttctcattcaatacatcccccgatttattcagcttttccctctaaaccggcggattgctaagaacactggtgttgtggccaagactgcttggtcaggggcaattgttggatcttcgtggtatgtgttgtccattaaacggcagtacgagtgttggaaacaggaatgtggcaaggaacataatgggacacattctccatcctgtaatcttgagtttcttgattgtaaaactacaaataatcgtgaacgccaagcttggttggagaaaacaaacgtgaatgagaactgcgatgctataaatgatgagggaaaatttcagtttggaatgtttaaagaggcattcaaaaatgacgtcgcttctgcacccttctggattgccacaagaggcgttgatgaaaaatccatcttaaattccctgcctttggatatacgacgtcaaattcaaaggcatctatgccttgcccatgttcgccgagttcccttcttcgcacaaatggatgatcagctcttggacgccatatgcgaacgcctcaagtcatccttaaataccagagacacacacatctttcgggagggtgctccggtgagtgagatgcttttcattgtcagagggcaactcgaaagctccacgactgatggtggaaggacaggattcttcaactccatcaccctaagagccggtgacttctgtggtgaagagttgctgacatgggccttaatgccttcatccagtctaaaccttccggtctcaactcgaactgtgaagtccctcactgaagtcgaggcatttgcactccgagctgaagacctcaagtatgttgcgagtcaatttaagcgccttcacagcaaaaaactgcagcacgcatttaggtactactcccaccagtggaggacttggggagcttgttatatacaagttgcctggagacgatacaaaaagaggaagttggcgttggatttgttcagggaggaggagtactattacacacatgttttggaccaagaccctgactataacaatggatcaactagtggtgcagacgacgatgacgacgacaacgacgatgaaggtccaactaagacctcatcgctgcgtcgtatggcagagcaattgcacattccactcgggcctgcaattttggcttccaagtttgctgcaaccaccaaaagaggacttcggaaggtggcaacacggcttgagcgtgaaactagcagtgccaaaatgcccaaaaagttgtttaagccgaacgagccagatttctcaaaagatagttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005216 GO:0005244 GO:0005249 GO:0005261 GO:0005267 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0008150 GO:0008324 GO:0009987 GO:0015075 GO:0015077 GO:0015079 GO:0015267 GO:0015318 GO:0015672 GO:0016020 GO:0016021 GO:0022803 GO:0022832 GO:0022836 GO:0022838 GO:0022839 GO:0022843 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0034220 GO:0042391 GO:0044425 GO:0044459 GO:0044464 GO:0046873 GO:0051179 GO:0051234 GO:0055085 GO:0065007 GO:0065008 GO:0071804 GO:0071805 GO:0071944 GO:0098655 GO:0098660 GO:0098662

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

Ion_trans cNMP_binding

Protein Analysis

598

Amino Acids

68.63

Weight (kDa)

9.21

Isoelectric Point (pI)

41.68

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010667)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G48010
fragaria_vesca	FvH4_5g05660
malus_domestica	MD06G1177300.v1.1 MD14G1183500.v1.1
prunus_persica	Prupe.5G176000_v2.0.a1 Prupe.5G176000_v2.0.a1
pyrus_communis	pycom14g15260
rosa_chinensis	RchiOBHm_Chr7g0193151
rosa_laevigata	RLG00000004292
rosa_multiflora	Rmu_co8354259.1_g000001 Rmu_co8396983.1_g000001 Rmu_ssc0000092.1_g000037
rosa_roxburghii	Rroxscaffold_3G00262340
rosa_rugosa	Rorug07G0008000 Rorug07G0008100
rosa_samantha	Rh7AG133100 Rh7BG134200 Rh7CG137000 Rh7DG135000
rosa_wichuraiana	Rw7G011380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	613
AatII	GACGTC	2 cut(s)	876, 958
Acc16I	TGCGCA	1 cut(s)	74
Acc36I	ACCTGC	1 cut(s)	78
AccB1I	GGYRCC	1 cut(s)	58
AccI	GTMKAC	1 cut(s)	433
AccII	CGCG	2 cut(s)	354, 391
AciI	CCGC	8 cut(s)	29, 40, 210, 265, 352, 354, 426, 574
AclWI	GGATC	5 cut(s)	108, 121, 173, 640, 1552
AcoI	YGGCCR	3 cut(s)	349, 355, 600
AcsI	RAATTY	3 cut(s)	833, 931, 960
AcuI	CTGAAG	2 cut(s)	1317, 1344
AcyI	GRCGYC	3 cut(s)	873, 955, 1035
AfaI	GTAC	3 cut(s)	668, 1394, 1499
AfiI	CCNNNNNNNGG	7 cut(s)	25, 45, 206, 403, 660, 943, 1407
AflIII	ACRYGT	1 cut(s)	1510
AgsI	TTSAA	5 cut(s)	67, 533, 865, 965, 1180
AhlI	ACTAGT	1 cut(s)	1550
AjnI	CCWGG	3 cut(s)	331, 374, 1442
AjuI	GAANNNNNNNTTGG	2 cut(s)	1457, 1489
AluBI	AGCT	9 cut(s)	12, 361, 491, 556, 776, 1027, 1146, 1322, 1424
AluI	AGCT	9 cut(s)	12, 361, 491, 556, 776, 1027, 1146, 1322, 1424
Alw21I	GWGCWC	2 cut(s)	9, 1102
Alw26I	GTCTC	4 cut(s)	221, 1068, 1273, 1441
Alw44I	GTGCAC	1 cut(s)	5
AlwI	GGATC	5 cut(s)	108, 121, 173, 640, 1552
Ama87I	CYCGRG	2 cut(s)	109, 1646
AoxI	GGCC	9 cut(s)	30, 36, 166, 349, 355, 378, 600, 1233, 1649
ApaLI	GTGCAC	1 cut(s)	5
ApeKI	GCWGC	4 cut(s)	491, 1378, 1612, 1676
ApoI	RAATTY	3 cut(s)	833, 931, 960
ArsI	GACNNNNNNTTYG	2 cut(s)	858, 890
AspLEI	GCGC	3 cut(s)	75, 393, 1359
AspS9I	GGNCC	9 cut(s)	37, 106, 166, 370, 378, 1233, 1519, 1592, 1649
AsuC2I	CCSGG	2 cut(s)	110, 111
AsuHPI	GGTGA	5 cut(s)	247, 1117, 1180, 1214, 1226
AvaI	CYCGRG	2 cut(s)	109, 1646
AvaII	GGWCC	4 cut(s)	106, 370, 1519, 1592
BaeGI	GKGCMC	2 cut(s)	9, 63
BalI	TGGCCA	1 cut(s)	602
BamHI	GGATCC	1 cut(s)	113
BanI	GGYRCC	1 cut(s)	58
BbsI	GAAGAC	1 cut(s)	1332
Bbv12I	GWGCWC	2 cut(s)	9, 1102
BbvI	GCAGC	4 cut(s)	478, 1390, 1599, 1663
BccI	CCATC	5 cut(s)	269, 727, 932, 1151, 1193
BceAI	ACGGC	3 cut(s)	42, 677, 1730
BcgI	CGANNNNNNTGC	2 cut(s)	1292, 1326
BciT130I	CCWGG	3 cut(s)	333, 376, 1444
BclI	TGATCA	1 cut(s)	1021
BcnI	CCSGG	2 cut(s)	110, 111
BcoDI	GTCTC	4 cut(s)	221, 1068, 1273, 1441
BcuI	ACTAGT	1 cut(s)	1550
BfaI	CTAG	5 cut(s)	339, 362, 422, 1551, 1731
BfmI	CTRYAG	1 cut(s)	1376
BfoI	RGCGCY	1 cut(s)	1360
BfuAI	ACCTGC	1 cut(s)	78
BglII	AGATCT	1 cut(s)	99
BisI	GCNGC	8 cut(s)	30, 352, 355, 426, 492, 1379, 1613, 1677
BlsI	GCNGC	8 cut(s)	31, 353, 356, 427, 493, 1380, 1614, 1678
BmcAI	AGTACT	1 cut(s)	1499
Bme1390I	CCNGG	5 cut(s)	110, 111, 333, 376, 1444
Bme18I	GGWCC	4 cut(s)	106, 370, 1519, 1592
BmeT110I	CYCGRG	2 cut(s)	109, 1646
BmgT120I	GGNCC	9 cut(s)	37, 106, 166, 370, 378, 1233, 1519, 1592, 1649
BmiI	GGNNCC	4 cut(s)	60, 108, 115, 372
BmrFI	CCNGG	5 cut(s)	110, 111, 333, 376, 1444
BmsI	GCATC	5 cut(s)	168, 255, 802, 979, 1104
BpiI	GAAGAC	1 cut(s)	1332
BplI	GAGNNNNNCTC	2 cut(s)	1122, 1154
BpmI	CTGGAG	1 cut(s)	1465
BpuEI	CTTGAG	4 cut(s)	752, 1037, 1316, 1739
BpuMI	CCSGG	2 cut(s)	110, 111
BsaBI	GATNNNNATC	1 cut(s)	158
BsaHI	GRCGYC	3 cut(s)	873, 955, 1035
BsaI	GGTCTC	2 cut(s)	221, 1273
BsaJI	CCNNGG	7 cut(s)	33, 86, 109, 331, 352, 374, 375
BsaWI	WCCGGW	2 cut(s)	1102, 1264
BsaXI	ACNNNNNCTCC	6 cut(s)	242, 272, 700, 730, 1481, 1511
Bsc4I	CCNNNNNNNGG	7 cut(s)	25, 45, 206, 403, 660, 943, 1407
Bse118I	RCCGGY	2 cut(s)	570, 1199
Bse1I	ACTGG	3 cut(s)	595, 1251, 1405
Bse3DI	GCAATG	1 cut(s)	381
Bse8I	GATNNNNATC	1 cut(s)	158
BseBI	CCWGG	3 cut(s)	333, 376, 1444
BseDI	CCNNGG	7 cut(s)	33, 86, 109, 331, 352, 374, 375
BseGI	GGATG	6 cut(s)	261, 537, 719, 1024, 1058, 1247
BseJI	GATNNNNATC	1 cut(s)	158
BseLI	CCNNNNNNNGG	7 cut(s)	25, 45, 206, 403, 660, 943, 1407
BseMI	GCAATG	1 cut(s)	381
BseNI	ACTGG	3 cut(s)	595, 1251, 1405
BseRI	GAGGAG	2 cut(s)	1505, 1508
BseSI	GKGCMC	2 cut(s)	9, 63
BseX3I	CGGCCG	1 cut(s)	349
BseXI	GCAGC	4 cut(s)	478, 1390, 1599, 1663
BsgI	GTGCAG	2 cut(s)	867, 1578
Bsh1236I	CGCG	2 cut(s)	354, 391
Bsh1285I	CGRYCG	1 cut(s)	352
BshFI	GGCC	9 cut(s)	32, 38, 168, 351, 357, 380, 602, 1235, 1651
BshNI	GGYRCC	1 cut(s)	58
BsiEI	CGRYCG	1 cut(s)	352
BsiHKAI	GWGCWC	2 cut(s)	9, 1102
BsiHKCI	CYCGRG	2 cut(s)	109, 1646
BsiSI	CCGG	6 cut(s)	46, 110, 571, 1103, 1200, 1265
BslFI	GGGAC	2 cut(s)	721, 1273
BslI	CCNNNNNNNGG	7 cut(s)	25, 45, 206, 403, 660, 943, 1407
BsmAI	GTCTC	4 cut(s)	221, 1068, 1273, 1441
BsmBI	CGTCTC	1 cut(s)	1441
BsmFI	GGGAC	2 cut(s)	721, 1273
BsmI	GAATGC	1 cut(s)	860
BsnI	GGCC	9 cut(s)	32, 38, 168, 351, 357, 380, 602, 1235, 1651
Bso31I	GGTCTC	2 cut(s)	221, 1273
BsoBI	CYCGRG	2 cut(s)	109, 1646
Bsp1286I	GDGCHC	3 cut(s)	9, 63, 1102
Bsp143I	GATC	8 cut(s)	99, 113, 153, 178, 519, 632, 1021, 1544
BspACI	CCGC	8 cut(s)	29, 40, 210, 265, 352, 354, 426, 574
BspANI	GGCC	9 cut(s)	32, 38, 168, 351, 357, 380, 602, 1235, 1651
BspFNI	CGCG	2 cut(s)	354, 391
BspLI	GGNNCC	4 cut(s)	60, 108, 115, 372
BspMAI	CTGCAG	1 cut(s)	1380
BspMI	ACCTGC	1 cut(s)	78
BspPI	GGATC	5 cut(s)	108, 121, 173, 640, 1552
BspT107I	GGYRCC	1 cut(s)	58
BspTNI	GGTCTC	2 cut(s)	221, 1273
BsrDI	GCAATG	1 cut(s)	381
BsrFI	RCCGGY	2 cut(s)	570, 1199
BsrI	ACTGG	3 cut(s)	595, 1251, 1405
BssAI	RCCGGY	2 cut(s)	570, 1199
BssECI	CCNNGG	7 cut(s)	33, 86, 109, 331, 352, 374, 375
BssMI	GATC	8 cut(s)	99, 113, 153, 178, 519, 632, 1021, 1544
BssNI	GRCGYC	3 cut(s)	873, 955, 1035
Bst2UI	CCWGG	3 cut(s)	333, 376, 1444
Bst4CI	ACNGT	4 cut(s)	90, 124, 132, 1282
Bst6I	CTCTTC	2 cut(s)	176, 1212
BstACI	GRCGYC	3 cut(s)	873, 955, 1035
BstC8I	GCNNGC	5 cut(s)	40, 220, 359, 1383, 1653
BstDEI	CTNAG	3 cut(s)	582, 1193, 1599
BstDSI	CCRYGG	2 cut(s)	86, 352
BstENI	CCTNNNNNAGG	1 cut(s)	401
BstF5I	GGATG	6 cut(s)	261, 537, 719, 1024, 1058, 1247
BstFNI	CGCG	2 cut(s)	354, 391
BstH2I	RGCGCY	1 cut(s)	1360
BstHHI	GCGC	3 cut(s)	75, 393, 1359
BstKTI	GATC	8 cut(s)	102, 116, 156, 181, 522, 635, 1024, 1547
BstMAI	GTCTC	4 cut(s)	221, 1068, 1273, 1441
BstMBI	GATC	8 cut(s)	99, 113, 153, 178, 519, 632, 1021, 1544
BstMCI	CGRYCG	1 cut(s)	352
BstMWI	GCNNNNNNNGC	8 cut(s)	35, 165, 326, 608, 1319, 1365, 1661, 1771
BstNI	CCWGG	3 cut(s)	333, 376, 1444
BstNSI	RCATGY	1 cut(s)	1514
BstSCI	CCNGG	5 cut(s)	108, 109, 331, 374, 1442
BstSFI	CTRYAG	1 cut(s)	1376
BstSLI	GKGCMC	2 cut(s)	9, 63
BstUI	CGCG	2 cut(s)	354, 391
BstV1I	GCAGC	4 cut(s)	478, 1390, 1599, 1663
BstV2I	GAAGAC	1 cut(s)	1332
BstX2I	RGATCY	3 cut(s)	99, 113, 632
BstYI	RGATCY	3 cut(s)	99, 113, 632
BstZI	CGGCCG	1 cut(s)	349
BsuRI	GGCC	9 cut(s)	32, 38, 168, 351, 357, 380, 602, 1235, 1651
BtgI	CCRYGG	2 cut(s)	86, 352
BtgZI	GCGATG	2 cut(s)	825, 1593
BtsCI	GGATG	6 cut(s)	261, 537, 719, 1024, 1058, 1247
BtsI	GCAGTG	1 cut(s)	1741
BtsIMutI	CAGTG	5 cut(s)	129, 588, 1293, 1412, 1741
BveI	ACCTGC	1 cut(s)	78
Cac8I	GCNNGC	5 cut(s)	40, 220, 359, 1383, 1653
CfoI	GCGC	3 cut(s)	75, 393, 1359
Cfr10I	RCCGGY	2 cut(s)	570, 1199
Cfr13I	GGNCC	9 cut(s)	37, 106, 166, 370, 378, 1233, 1519, 1592, 1649
Cfr42I	CCGCGG	1 cut(s)	355
Cfr9I	CCCGGG	1 cut(s)	109
CseI	GACGC	2 cut(s)	1043, 1604
Csp6I	GTAC	3 cut(s)	667, 1393, 1498
CviAII	CATG	5 cut(s)	163, 223, 986, 1230, 1511
CviQI	GTAC	3 cut(s)	667, 1393, 1498
DdeI	CTNAG	3 cut(s)	582, 1193, 1599
DpnI	GATC	8 cut(s)	101, 115, 155, 180, 521, 634, 1023, 1546
DpnII	GATC	8 cut(s)	99, 113, 153, 178, 519, 632, 1021, 1544
DraI	TTTAAA	1 cut(s)	853
DrdI	GACNNNNNNGTC	1 cut(s)	613
DseDI	GACNNNNNNGTC	1 cut(s)	613
EaeI	YGGCCR	3 cut(s)	349, 355, 600
EagI	CGGCCG	1 cut(s)	349
Eam1104I	CTCTTC	2 cut(s)	176, 1212
EarI	CTCTTC	2 cut(s)	176, 1212
EciI	GGCGGA	2 cut(s)	225, 589
EclXI	CGGCCG	1 cut(s)	349
Eco31I	GGTCTC	2 cut(s)	221, 1273
Eco47I	GGWCC	4 cut(s)	106, 370, 1519, 1592
Eco52I	CGGCCG	1 cut(s)	349
Eco57I	CTGAAG	2 cut(s)	1317, 1344
Eco88I	CYCGRG	2 cut(s)	109, 1646
EcoNI	CCTNNNNNAGG	1 cut(s)	401
EcoO109I	RGGNCCY	1 cut(s)	370
EcoRII	CCWGG	3 cut(s)	331, 374, 1442
Esp3I	CGTCTC	1 cut(s)	1441
FaeI	CATG	5 cut(s)	166, 226, 989, 1233, 1514
FalI	AAGNNNNNCTT	2 cut(s)	1046, 1078
FaqI	GGGAC	2 cut(s)	721, 1273
FatI	CATG	5 cut(s)	162, 222, 985, 1229, 1510
FauI	CCCGC	1 cut(s)	47
FauNDI	CATATG	1 cut(s)	1040
FbaI	TGATCA	1 cut(s)	1021
FblI	GTMKAC	1 cut(s)	433
Fnu4HI	GCNGC	8 cut(s)	30, 352, 355, 426, 492, 1379, 1613, 1677
FokI	GGATG	6 cut(s)	248, 524, 706, 1031, 1045, 1234
Fsp4HI	GCNGC	8 cut(s)	30, 352, 355, 426, 492, 1379, 1613, 1677
FspBI	CTAG	5 cut(s)	339, 362, 422, 1551, 1731
FspI	TGCGCA	1 cut(s)	74
GlaI	GCGC	3 cut(s)	74, 392, 1358
GluI	GCNGC	8 cut(s)	30, 352, 355, 426, 492, 1379, 1613, 1677
GsuI	CTGGAG	1 cut(s)	1465
HaeII	RGCGCY	1 cut(s)	1360
HaeIII	GGCC	9 cut(s)	32, 38, 168, 351, 357, 380, 602, 1235, 1651
HapII	CCGG	6 cut(s)	46, 110, 571, 1103, 1200, 1265
HgaI	GACGC	2 cut(s)	1043, 1604
HhaI	GCGC	3 cut(s)	75, 393, 1359
Hin1I	GRCGYC	3 cut(s)	873, 955, 1035
Hin1II	CATG	5 cut(s)	166, 226, 989, 1233, 1514
Hin6I	GCGC	3 cut(s)	73, 391, 1357
HinP1I	GCGC	3 cut(s)	73, 391, 1357
HindIII	AAGCTT	1 cut(s)	774
HinfI	GANTC	3 cut(s)	466, 1173, 1345
HpaII	CCGG	6 cut(s)	46, 110, 571, 1103, 1200, 1265
HphI	GGTGA	5 cut(s)	247, 1117, 1180, 1214, 1226
Hpy166II	GTNNAC	3 cut(s)	7, 434, 767
Hpy188I	TCNGA	5 cut(s)	97, 118, 1130, 1319, 1701
Hpy188III	TCNNGA	6 cut(s)	151, 731, 740, 764, 892, 1091
Hpy8I	GTNNAC	3 cut(s)	7, 434, 767
Hpy99I	CGWCG	7 cut(s)	478, 878, 957, 1568, 1577, 1586, 1620
HpyAV	CCTTC	9 cut(s)	73, 898, 1012, 1158, 1254, 1271, 1370, 1583, 1696
HpyCH4III	ACNGT	4 cut(s)	90, 124, 132, 1282
HpyCH4IV	ACGT	4 cut(s)	252, 795, 873, 955
HpyF10VI	GCNNNNNNNGC	8 cut(s)	35, 165, 326, 608, 1319, 1365, 1661, 1771
HpyF3I	CTNAG	3 cut(s)	582, 1193, 1599
HpySE526I	ACGT	4 cut(s)	252, 795, 873, 955
Hsp92I	GRCGYC	3 cut(s)	873, 955, 1035
Hsp92II	CATG	5 cut(s)	166, 226, 989, 1233, 1514
HspAI	GCGC	3 cut(s)	73, 391, 1357
Ksp22I	TGATCA	1 cut(s)	1021
KspI	CCGCGG	1 cut(s)	355
Kzo9I	GATC	8 cut(s)	99, 113, 153, 178, 519, 632, 1021, 1544
LmnI	GCTCC	3 cut(s)	1105, 1151, 1421
Lsp1109I	GCAGC	4 cut(s)	478, 1390, 1599, 1663
LweI	GCATC	5 cut(s)	168, 255, 802, 979, 1104
MaeI	CTAG	5 cut(s)	339, 362, 422, 1551, 1731
MaeII	ACGT	4 cut(s)	252, 795, 873, 955
MaeIII	GTNAC	3 cut(s)	124, 253, 1202
MalI	GATC	8 cut(s)	101, 115, 155, 180, 521, 634, 1023, 1546
MboI	GATC	8 cut(s)	99, 113, 153, 178, 519, 632, 1021, 1544
MfeI	CAATTG	2 cut(s)	624, 1631
MflI	RGATCY	3 cut(s)	99, 113, 632
MhlI	GDGCHC	3 cut(s)	9, 63, 1102
MlsI	TGGCCA	1 cut(s)	602
MluCI	AATT	7 cut(s)	624, 833, 931, 960, 1349, 1631, 1656
MluNI	TGGCCA	1 cut(s)	602
MlyI	GAGTC	1 cut(s)	1354
MmeI	TCCRAC	6 cut(s)	75, 610, 656, 762, 1455, 1619
Mox20I	TGGCCA	1 cut(s)	602
MscI	TGGCCA	1 cut(s)	602
MseI	TTAA	8 cut(s)	366, 657, 852, 929, 1064, 1238, 1353, 1761
Msp20I	TGGCCA	1 cut(s)	602
MspA1I	CMGCKG	2 cut(s)	354, 491
MspI	CCGG	6 cut(s)	46, 110, 571, 1103, 1200, 1265
MspR9I	CCNGG	5 cut(s)	110, 111, 333, 376, 1444
MunI	CAATTG	2 cut(s)	624, 1631
Mva1269I	GAATGC	1 cut(s)	860
MvaI	CCWGG	3 cut(s)	333, 376, 1444
MvnI	CGCG	2 cut(s)	354, 391
MwoI	GCNNNNNNNGC	8 cut(s)	35, 165, 326, 608, 1319, 1365, 1661, 1771
NciI	CCSGG	2 cut(s)	110, 111
NdeI	CATATG	1 cut(s)	1040
NdeII	GATC	8 cut(s)	99, 113, 153, 178, 519, 632, 1021, 1544
NlaIII	CATG	5 cut(s)	166, 226, 989, 1233, 1514
NlaIV	GGNNCC	4 cut(s)	60, 108, 115, 372
NmeAIII	GCCGAG	2 cut(s)	14, 1019
NmuCI	GTSAC	3 cut(s)	124, 253, 1202
NsbI	TGCGCA	1 cut(s)	74
NspI	RCATGY	1 cut(s)	1514
PasI	CCCWGGG	1 cut(s)	375
PciI	ACATGT	1 cut(s)	1510
PcsI	WCGNNNNNNNCGW	7 cut(s)	482, 1041, 1569, 1572, 1578, 1581, 1720
PctI	GAATGC	1 cut(s)	860
PfeI	GAWTC	2 cut(s)	466, 1173
PkrI	GCNGC	8 cut(s)	31, 353, 356, 427, 493, 1380, 1614, 1678
PleI	GAGTC	1 cut(s)	1353
PpsI	GAGTC	1 cut(s)	1353
PpuMI	RGGWCCY	1 cut(s)	370
PscI	ACATGT	1 cut(s)	1510
Psp5II	RGGWCCY	1 cut(s)	370
Psp6I	CCWGG	3 cut(s)	331, 374, 1442
PspGI	CCWGG	3 cut(s)	331, 374, 1442
PspN4I	GGNNCC	4 cut(s)	60, 108, 115, 372
PspPI	GGNCC	9 cut(s)	37, 106, 166, 370, 378, 1233, 1519, 1592, 1649
PspPPI	RGGWCCY	1 cut(s)	370
PstI	CTGCAG	1 cut(s)	1380
PsuI	RGATCY	3 cut(s)	99, 113, 632
PvuII	CAGCTG	1 cut(s)	491
RsaI	GTAC	3 cut(s)	668, 1394, 1499
RsaNI	GTAC	3 cut(s)	667, 1393, 1498
SacII	CCGCGG	1 cut(s)	355
SaqAI	TTAA	8 cut(s)	366, 657, 852, 929, 1064, 1238, 1353, 1761
SatI	GCNGC	8 cut(s)	30, 352, 355, 426, 492, 1379, 1613, 1677
Sau3AI	GATC	8 cut(s)	99, 113, 153, 178, 519, 632, 1021, 1544
Sau96I	GGNCC	9 cut(s)	37, 106, 166, 370, 378, 1233, 1519, 1592, 1649
ScaI	AGTACT	1 cut(s)	1499
SchI	GAGTC	1 cut(s)	1354
ScrFI	CCNGG	5 cut(s)	110, 111, 333, 376, 1444
SduI	GDGCHC	3 cut(s)	9, 63, 1102
SfaNI	GCATC	5 cut(s)	168, 255, 802, 979, 1104
SfcI	CTRYAG	1 cut(s)	1376
Sfr303I	CCGCGG	1 cut(s)	355
SgrBI	CCGCGG	1 cut(s)	355
SinI	GGWCC	4 cut(s)	106, 370, 1519, 1592
SmaI	CCCGGG	1 cut(s)	111
SmlI	CTYRAG	4 cut(s)	731, 1052, 1331, 1718
SmoI	CTYRAG	4 cut(s)	731, 1052, 1331, 1718
SpeI	ACTAGT	1 cut(s)	1550
Sse9I	AATT	7 cut(s)	624, 833, 931, 960, 1349, 1631, 1656
SsiI	CCGC	8 cut(s)	29, 40, 210, 265, 352, 354, 426, 574
SspMI	CTAG	5 cut(s)	339, 362, 422, 1551, 1731
StyD4I	CCNGG	5 cut(s)	108, 109, 331, 374, 1442
TaaI	ACNGT	4 cut(s)	90, 124, 132, 1282
TaiI	ACGT	4 cut(s)	255, 798, 876, 958
TaqI	TCGA	5 cut(s)	177, 485, 1140, 1276, 1302
TaqII	GACCGA	1 cut(s)	245
TasI	AATT	7 cut(s)	624, 833, 931, 960, 1349, 1631, 1656
TatI	WGTACW	1 cut(s)	1497
TauI	GCSGC	4 cut(s)	32, 354, 357, 428
TfiI	GAWTC	2 cut(s)	466, 1173
Tru1I	TTAA	8 cut(s)	366, 657, 852, 929, 1064, 1238, 1353, 1761
Tru9I	TTAA	8 cut(s)	366, 657, 852, 929, 1064, 1238, 1353, 1761
TscAI	CASTG	5 cut(s)	129, 595, 1300, 1412, 1741
TseFI	GTSAC	3 cut(s)	124, 253, 1202
TseI	GCWGC	4 cut(s)	491, 1378, 1612, 1676
Tsp45I	GTSAC	3 cut(s)	124, 253, 1202
TspDTI	ATGAA	4 cut(s)	930, 1111, 1236, 1602
TspMI	CCCGGG	1 cut(s)	109
TspRI	CASTG	5 cut(s)	129, 595, 1300, 1412, 1741
VneI	GTGCAC	1 cut(s)	5
VpaK11BI	GGWCC	4 cut(s)	106, 370, 1519, 1592
XagI	CCTNNNNNAGG	1 cut(s)	401
XapI	RAATTY	3 cut(s)	833, 931, 960
XceI	RCATGY	1 cut(s)	1514
XmaI	CCCGGG	1 cut(s)	109
XmiI	GTMKAC	1 cut(s)	433
XspI	CTAG	5 cut(s)	339, 362, 422, 1551, 1731
ZraI	GACGTC	2 cut(s)	874, 956
ZrmI	AGTACT	1 cut(s)	1499

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.