cyclic nucleotide-gated ion channel
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G48010 |
| fragaria_vesca | FvH4_5g05660 |
| malus_domestica | MD06G1177300.v1.1 MD14G1183500.v1.1 |
| prunus_persica | Prupe.5G176000_v2.0.a1 Prupe.5G176000_v2.0.a1 |
| pyrus_communis | pycom14g15260 |
| rosa_chinensis | RchiOBHm_Chr7g0193151 |
| rosa_laevigata | RLG00000004292 |
| rosa_multiflora | Rmu_co8354259.1_g000001 Rmu_co8396983.1_g000001 Rmu_ssc0000092.1_g000037 |
| rosa_roxburghii | Rroxscaffold_3G00262340 |
| rosa_rugosa | Rorug07G0008000 Rorug07G0008100 |
| rosa_samantha | Rh7AG133100 Rh7BG134200 Rh7CG137000 Rh7DG135000 |
| rosa_wichuraiana | Rw7G011380 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 613 |
| AccI | GTMKAC | 1 cut(s) | 671 |
| AccII | CGCG | 2 cut(s) | 123, 807 |
| AccIII | TCCGGA | 2 cut(s) | 72, 312 |
| AclWI | GGATC | 7 cut(s) | 64, 76, 94, 108, 121, 1278, 1418 |
| AcsI | RAATTY | 5 cut(s) | 555, 765, 964, 1284, 1988 |
| AcuI | CTGAAG | 1 cut(s) | 1668 |
| AfaI | GTAC | 7 cut(s) | 23, 268, 589, 1323, 1718, 1897, 2034 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 109, 206, 339, 696, 952, 1230, 2010 |
| AflIII | ACRYGT | 3 cut(s) | 121, 1189, 1834 |
| AgeI | ACCGGT | 1 cut(s) | 590 |
| AjnI | CCWGG | 2 cut(s) | 86, 1394 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1775, 1807, 2060, 2092 |
| AleI | CACNNNNGTG | 1 cut(s) | 1729 |
| AluBI | AGCT | 7 cut(s) | 361, 491, 1351, 1470, 1646, 1855, 2055 |
| AluI | AGCT | 7 cut(s) | 361, 491, 1351, 1470, 1646, 1855, 2055 |
| Alw21I | GWGCWC | 1 cut(s) | 1472 |
| Alw26I | GTCTC | 5 cut(s) | 342, 986, 1052, 1131, 1617 |
| AlwI | GGATC | 7 cut(s) | 64, 76, 94, 108, 121, 1278, 1418 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 623, 1354 |
| Ama87I | CYCGRG | 5 cut(s) | 109, 332, 339, 375, 1376 |
| Aor13HI | TCCGGA | 2 cut(s) | 72, 312 |
| AoxI | GGCC | 5 cut(s) | 166, 238, 355, 1557, 1967 |
| ApeKI | GCWGC | 5 cut(s) | 491, 623, 726, 1702, 2052 |
| ApoI | RAATTY | 5 cut(s) | 555, 765, 964, 1284, 1988 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 851, 883 |
| AseI | ATTAAT | 1 cut(s) | 738 |
| AsiGI | ACCGGT | 1 cut(s) | 590 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1191 |
| AspLEI | GCGC | 1 cut(s) | 1683 |
| AspS9I | GGNCC | 7 cut(s) | 93, 166, 238, 370, 1557, 1843, 1967 |
| AsuC2I | CCSGG | 6 cut(s) | 110, 111, 333, 334, 376, 377 |
| AsuHPI | GGTGA | 6 cut(s) | 247, 731, 1433, 1538, 1618, 2030 |
| AvaI | CYCGRG | 5 cut(s) | 109, 332, 339, 375, 1376 |
| AvaII | GGWCC | 3 cut(s) | 93, 370, 1843 |
| BamHI | GGATCC | 1 cut(s) | 113 |
| BanII | GRGCYC | 1 cut(s) | 1472 |
| BbsI | GAAGAC | 1 cut(s) | 265 |
| Bbv12I | GWGCWC | 1 cut(s) | 1472 |
| BbvCI | CCTCAGC | 1 cut(s) | 888 |
| BbvI | GCAGC | 5 cut(s) | 478, 610, 738, 1714, 2064 |
| BccI | CCATC | 3 cut(s) | 191, 763, 1475 |
| BceAI | ACGGC | 4 cut(s) | 287, 713, 1263, 1302 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 211, 245, 791, 825 |
| BciT130I | CCWGG | 2 cut(s) | 88, 1396 |
| BclI | TGATCA | 1 cut(s) | 1345 |
| BcnI | CCSGG | 6 cut(s) | 110, 111, 333, 334, 376, 377 |
| BcoDI | GTCTC | 5 cut(s) | 342, 986, 1052, 1131, 1617 |
| BfaI | CTAG | 1 cut(s) | 543 |
| BfmI | CTRYAG | 1 cut(s) | 1700 |
| BfoI | RGCGCY | 1 cut(s) | 1684 |
| BglII | AGATCT | 2 cut(s) | 822, 1651 |
| BmcAI | AGTACT | 1 cut(s) | 2034 |
| Bme1390I | CCNGG | 8 cut(s) | 88, 110, 111, 333, 334, 376, 377, 1396 |
| Bme18I | GGWCC | 3 cut(s) | 93, 370, 1843 |
| BmeT110I | CYCGRG | 5 cut(s) | 109, 332, 339, 375, 1376 |
| BmgT120I | GGNCC | 7 cut(s) | 93, 166, 238, 370, 1557, 1843, 1967 |
| BmiI | GGNNCC | 5 cut(s) | 95, 115, 137, 214, 372 |
| BmrFI | CCNGG | 8 cut(s) | 88, 110, 111, 333, 334, 376, 377, 1396 |
| BpiI | GAAGAC | 1 cut(s) | 265 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 345, 377 |
| BpmI | CTGGAG | 3 cut(s) | 1158, 1274, 2041 |
| Bpu10I | CCTNAGC | 1 cut(s) | 888 |
| BpuEI | CTTGAG | 3 cut(s) | 803, 1484, 1640 |
| BpuMI | CCSGG | 6 cut(s) | 110, 111, 333, 334, 376, 377 |
| BsaAI | YACGTR | 1 cut(s) | 675 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1930 |
| BsaI | GGTCTC | 2 cut(s) | 342, 1052 |
| BsaJI | CCNNGG | 6 cut(s) | 86, 109, 241, 332, 374, 375 |
| BsaWI | WCCGGW | 3 cut(s) | 72, 312, 590 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 736, 766, 1805, 1835 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 109, 206, 339, 696, 952, 1230, 2010 |
| Bse118I | RCCGGY | 3 cut(s) | 570, 590, 1523 |
| Bse1I | ACTGG | 2 cut(s) | 1008, 1729 |
| Bse3DI | GCAATG | 1 cut(s) | 1803 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1930 |
| BseAI | TCCGGA | 2 cut(s) | 72, 312 |
| BseBI | CCWGG | 2 cut(s) | 88, 1396 |
| BseDI | CCNNGG | 6 cut(s) | 86, 109, 241, 332, 374, 375 |
| BseGI | GGATG | 7 cut(s) | 42, 755, 1158, 1348, 1363, 1382, 1982 |
| BseJI | GATNNNNATC | 1 cut(s) | 1930 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 109, 206, 339, 696, 952, 1230, 2010 |
| BseMI | GCAATG | 1 cut(s) | 1803 |
| BseMII | CTCAG | 4 cut(s) | 879, 1531, 1631, 1911 |
| BseNI | ACTGG | 2 cut(s) | 1008, 1729 |
| BseRI | GAGGAG | 5 cut(s) | 205, 1160, 1786, 1829, 1832 |
| BseXI | GCAGC | 5 cut(s) | 478, 610, 738, 1714, 2064 |
| BseYI | CCCAGC | 1 cut(s) | 200 |
| BsgI | GTGCAG | 1 cut(s) | 936 |
| Bsh1236I | CGCG | 2 cut(s) | 123, 807 |
| BshFI | GGCC | 5 cut(s) | 168, 240, 357, 1559, 1969 |
| BshTI | ACCGGT | 1 cut(s) | 590 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1472 |
| BsiHKCI | CYCGRG | 5 cut(s) | 109, 332, 339, 375, 1376 |
| BsiSI | CCGG | 8 cut(s) | 73, 110, 313, 333, 376, 571, 591, 1524 |
| BsiWI | CGTACG | 1 cut(s) | 21 |
| BslFI | GGGAC | 1 cut(s) | 79 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 109, 206, 339, 696, 952, 1230, 2010 |
| BsmAI | GTCTC | 5 cut(s) | 342, 986, 1052, 1131, 1617 |
| BsmFI | GGGAC | 1 cut(s) | 79 |
| BsmI | GAATGC | 2 cut(s) | 728, 1026 |
| BsnI | GGCC | 5 cut(s) | 168, 240, 357, 1559, 1969 |
| Bso31I | GGTCTC | 2 cut(s) | 342, 1052 |
| BsoBI | CYCGRG | 5 cut(s) | 109, 332, 339, 375, 1376 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1472 |
| Bsp13I | TCCGGA | 2 cut(s) | 72, 312 |
| BspANI | GGCC | 5 cut(s) | 168, 240, 357, 1559, 1969 |
| BspCNI | CTCAG | 4 cut(s) | 880, 1530, 1632, 1912 |
| BspEI | TCCGGA | 2 cut(s) | 72, 312 |
| BspFNI | CGCG | 2 cut(s) | 123, 807 |
| BspHI | TCATGA | 1 cut(s) | 1068 |
| BspLI | GGNNCC | 5 cut(s) | 95, 115, 137, 214, 372 |
| BspMAI | CTGCAG | 1 cut(s) | 1704 |
| BspPI | GGATC | 7 cut(s) | 64, 76, 94, 108, 121, 1278, 1418 |
| BspQI | GCTCTTC | 1 cut(s) | 1845 |
| BspTNI | GGTCTC | 2 cut(s) | 342, 1052 |
| BsrDI | GCAATG | 1 cut(s) | 1803 |
| BsrFI | RCCGGY | 3 cut(s) | 570, 590, 1523 |
| BsrI | ACTGG | 2 cut(s) | 1008, 1729 |
| BssAI | RCCGGY | 3 cut(s) | 570, 590, 1523 |
| BssECI | CCNNGG | 6 cut(s) | 86, 109, 241, 332, 374, 375 |
| Bst2UI | CCWGG | 2 cut(s) | 88, 1396 |
| Bst4CI | ACNGT | 4 cut(s) | 271, 1606, 1691, 2076 |
| Bst6I | CTCTTC | 6 cut(s) | 176, 1061, 1536, 1778, 1845, 2002 |
| BstBAI | YACGTR | 1 cut(s) | 675 |
| BstC8I | GCNNGC | 5 cut(s) | 40, 359, 1707, 1971, 2063 |
| BstDEI | CTNAG | 4 cut(s) | 888, 1517, 1640, 1920 |
| BstF5I | GGATG | 7 cut(s) | 42, 755, 1158, 1348, 1363, 1382, 1982 |
| BstFNI | CGCG | 2 cut(s) | 123, 807 |
| BstH2I | RGCGCY | 1 cut(s) | 1684 |
| BstHHI | GCGC | 1 cut(s) | 1683 |
| BstMAI | GTCTC | 5 cut(s) | 342, 986, 1052, 1131, 1617 |
| BstNI | CCWGG | 2 cut(s) | 88, 1396 |
| BstNSI | RCATGY | 3 cut(s) | 1709, 1838, 2065 |
| BstSCI | CCNGG | 8 cut(s) | 86, 108, 109, 331, 332, 374, 375, 1394 |
| BstSFI | CTRYAG | 1 cut(s) | 1700 |
| BstUI | CGCG | 2 cut(s) | 123, 807 |
| BstV1I | GCAGC | 5 cut(s) | 478, 610, 738, 1714, 2064 |
| BstV2I | GAAGAC | 1 cut(s) | 265 |
| BstX2I | RGATCY | 6 cut(s) | 81, 99, 113, 822, 1270, 1651 |
| BstYI | RGATCY | 6 cut(s) | 81, 99, 113, 822, 1270, 1651 |
| BsuRI | GGCC | 5 cut(s) | 168, 240, 357, 1559, 1969 |
| BtgZI | GCGATG | 2 cut(s) | 822, 861 |
| BtsCI | GGATG | 7 cut(s) | 42, 755, 1158, 1348, 1363, 1382, 1982 |
| BtsI | GCAGTG | 3 cut(s) | 480, 793, 924 |
| BtsIMutI | CAGTG | 7 cut(s) | 480, 793, 924, 1015, 1637, 1736, 1941 |
| Cac8I | GCNNGC | 5 cut(s) | 40, 359, 1707, 1971, 2063 |
| CaiI | CAGNNNCTG | 2 cut(s) | 623, 1354 |
| CciI | TCATGA | 1 cut(s) | 1068 |
| CfoI | GCGC | 1 cut(s) | 1683 |
| Cfr10I | RCCGGY | 3 cut(s) | 570, 590, 1523 |
| Cfr13I | GGNCC | 7 cut(s) | 93, 166, 238, 370, 1557, 1843, 1967 |
| Cfr9I | CCCGGG | 3 cut(s) | 109, 332, 375 |
| Csp6I | GTAC | 7 cut(s) | 22, 267, 588, 1322, 1717, 1896, 2033 |
| CspAI | ACCGGT | 1 cut(s) | 590 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1196, 1231 |
| CviQI | GTAC | 7 cut(s) | 22, 267, 588, 1322, 1717, 1896, 2033 |
| DdeI | CTNAG | 4 cut(s) | 888, 1517, 1640, 1920 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 613 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 613 |
| Eam1104I | CTCTTC | 6 cut(s) | 176, 1061, 1536, 1778, 1845, 2002 |
| EarI | CTCTTC | 6 cut(s) | 176, 1061, 1536, 1778, 1845, 2002 |
| EciI | GGCGGA | 5 cut(s) | 25, 589, 994, 1265, 1304 |
| Ecl136II | GAGCTC | 1 cut(s) | 1470 |
| Eco24I | GRGCYC | 1 cut(s) | 1472 |
| Eco31I | GGTCTC | 2 cut(s) | 342, 1052 |
| Eco47I | GGWCC | 3 cut(s) | 93, 370, 1843 |
| Eco53kI | GAGCTC | 1 cut(s) | 1470 |
| Eco57I | CTGAAG | 1 cut(s) | 1668 |
| Eco88I | CYCGRG | 5 cut(s) | 109, 332, 339, 375, 1376 |
| EcoICRI | GAGCTC | 1 cut(s) | 1470 |
| EcoRII | CCWGG | 2 cut(s) | 86, 1394 |
| EcoT22I | ATGCAT | 1 cut(s) | 1028 |
| EcoT38I | GRGCYC | 1 cut(s) | 1472 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1533, 1565, 1839, 1871 |
| FaqI | GGGAC | 1 cut(s) | 79 |
| FauI | CCCGC | 2 cut(s) | 47, 570 |
| FauNDI | CATATG | 2 cut(s) | 976, 1364 |
| FbaI | TGATCA | 1 cut(s) | 1345 |
| FblI | GTMKAC | 1 cut(s) | 671 |
| FokI | GGATG | 7 cut(s) | 29, 742, 1165, 1355, 1369, 1370, 1969 |
| FriOI | GRGCYC | 1 cut(s) | 1472 |
| FspBI | CTAG | 1 cut(s) | 543 |
| GlaI | GCGC | 1 cut(s) | 1682 |
| GsaI | CCCAGC | 1 cut(s) | 204 |
| GsuI | CTGGAG | 3 cut(s) | 1158, 1274, 2041 |
| HaeII | RGCGCY | 1 cut(s) | 1684 |
| HaeIII | GGCC | 5 cut(s) | 168, 240, 357, 1559, 1969 |
| HapII | CCGG | 8 cut(s) | 73, 110, 313, 333, 376, 571, 591, 1524 |
| HhaI | GCGC | 1 cut(s) | 1683 |
| Hin6I | GCGC | 1 cut(s) | 1681 |
| HinP1I | GCGC | 1 cut(s) | 1681 |
| HincII | GTYRAC | 2 cut(s) | 7, 1166 |
| HindII | GTYRAC | 2 cut(s) | 7, 1166 |
| HinfI | GANTC | 3 cut(s) | 1379, 1874, 2014 |
| HpaI | GTTAAC | 1 cut(s) | 7 |
| HpaII | CCGG | 8 cut(s) | 73, 110, 313, 333, 376, 571, 591, 1524 |
| HphI | GGTGA | 6 cut(s) | 247, 731, 1433, 1538, 1618, 2030 |
| Hpy166II | GTNNAC | 5 cut(s) | 7, 672, 1166, 1322, 1370 |
| Hpy188I | TCNGA | 7 cut(s) | 118, 406, 519, 1454, 1520, 1873, 2019 |
| Hpy8I | GTNNAC | 5 cut(s) | 7, 672, 1166, 1322, 1370 |
| Hpy99I | CGWCG | 2 cut(s) | 699, 1200 |
| HpyCH4III | ACNGT | 4 cut(s) | 271, 1606, 1691, 2076 |
| HpyCH4IV | ACGT | 3 cut(s) | 586, 674, 1189 |
| HpyF3I | CTNAG | 4 cut(s) | 888, 1517, 1640, 1920 |
| HpySE526I | ACGT | 3 cut(s) | 586, 674, 1189 |
| HspAI | GCGC | 1 cut(s) | 1681 |
| Kpn2I | TCCGGA | 2 cut(s) | 72, 312 |
| Ksp22I | TGATCA | 1 cut(s) | 1345 |
| KspAI | GTTAAC | 1 cut(s) | 7 |
| LguI | GCTCTTC | 1 cut(s) | 1845 |
| LmnI | GCTCC | 4 cut(s) | 218, 334, 1475, 2060 |
| Lsp1109I | GCAGC | 5 cut(s) | 478, 610, 738, 1714, 2064 |
| MaeI | CTAG | 1 cut(s) | 543 |
| MaeII | ACGT | 3 cut(s) | 586, 674, 1189 |
| MaeIII | GTNAC | 3 cut(s) | 124, 253, 1526 |
| MflI | RGATCY | 6 cut(s) | 81, 99, 113, 822, 1270, 1651 |
| MhlI | GDGCHC | 1 cut(s) | 1472 |
| MluI | ACGCGT | 1 cut(s) | 121 |
| MlyI | GAGTC | 1 cut(s) | 1388 |
| MmeI | TCCRAC | 1 cut(s) | 429 |
| Mph1103I | ATGCAT | 1 cut(s) | 1028 |
| MroI | TCCGGA | 2 cut(s) | 72, 312 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1191 |
| MseI | TTAA | 2 cut(s) | 6, 738 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1729, 2043 |
| MspA1I | CMGCKG | 1 cut(s) | 491 |
| MspI | CCGG | 8 cut(s) | 73, 110, 313, 333, 376, 571, 591, 1524 |
| MspR9I | CCNGG | 8 cut(s) | 88, 110, 111, 333, 334, 376, 377, 1396 |
| Mva1269I | GAATGC | 2 cut(s) | 728, 1026 |
| MvaI | CCWGG | 2 cut(s) | 88, 1396 |
| MvnI | CGCG | 2 cut(s) | 123, 807 |
| NciI | CCSGG | 6 cut(s) | 110, 111, 333, 334, 376, 377 |
| NdeI | CATATG | 2 cut(s) | 976, 1364 |
| NlaIV | GGNNCC | 5 cut(s) | 95, 115, 137, 214, 372 |
| NmeAIII | GCCGAG | 1 cut(s) | 222 |
| NmuCI | GTSAC | 3 cut(s) | 124, 253, 1526 |
| NsiI | ATGCAT | 1 cut(s) | 1028 |
| NspI | RCATGY | 3 cut(s) | 1709, 1838, 2065 |
| OliI | CACNNNNGTG | 1 cut(s) | 1729 |
| PaeI | GCATGC | 2 cut(s) | 1709, 2065 |
| PaeR7I | CTCGAG | 1 cut(s) | 1376 |
| PagI | TCATGA | 1 cut(s) | 1068 |
| PciI | ACATGT | 1 cut(s) | 1834 |
| PciSI | GCTCTTC | 1 cut(s) | 1845 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 249, 1195 |
| PctI | GAATGC | 2 cut(s) | 728, 1026 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1191 |
| PfeI | GAWTC | 2 cut(s) | 1874, 2014 |
| Pfl23II | CGTACG | 1 cut(s) | 21 |
| PinAI | ACCGGT | 1 cut(s) | 590 |
| PleI | GAGTC | 1 cut(s) | 1387 |
| PpsI | GAGTC | 1 cut(s) | 1387 |
| Ppu21I | YACGTR | 1 cut(s) | 675 |
| PscI | ACATGT | 1 cut(s) | 1834 |
| PshBI | ATTAAT | 1 cut(s) | 738 |
| Psp124BI | GAGCTC | 1 cut(s) | 1472 |
| Psp6I | CCWGG | 2 cut(s) | 86, 1394 |
| PspFI | CCCAGC | 1 cut(s) | 200 |
| PspGI | CCWGG | 2 cut(s) | 86, 1394 |
| PspLI | CGTACG | 1 cut(s) | 21 |
| PspN4I | GGNNCC | 5 cut(s) | 95, 115, 137, 214, 372 |
| PspPI | GGNCC | 7 cut(s) | 93, 166, 238, 370, 1557, 1843, 1967 |
| PspXI | VCTCGAGB | 1 cut(s) | 1376 |
| PstI | CTGCAG | 1 cut(s) | 1704 |
| PstNI | CAGNNNCTG | 2 cut(s) | 623, 1354 |
| PsuI | RGATCY | 6 cut(s) | 81, 99, 113, 822, 1270, 1651 |
| PvuII | CAGCTG | 1 cut(s) | 491 |
| RsaI | GTAC | 7 cut(s) | 23, 268, 589, 1323, 1718, 1897, 2034 |
| RsaNI | GTAC | 7 cut(s) | 22, 267, 588, 1322, 1717, 1896, 2033 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1729, 2043 |
| SacI | GAGCTC | 1 cut(s) | 1472 |
| SapI | GCTCTTC | 1 cut(s) | 1845 |
| SaqAI | TTAA | 2 cut(s) | 6, 738 |
| Sau96I | GGNCC | 7 cut(s) | 93, 166, 238, 370, 1557, 1843, 1967 |
| ScaI | AGTACT | 1 cut(s) | 2034 |
| SchI | GAGTC | 1 cut(s) | 1388 |
| ScrFI | CCNGG | 8 cut(s) | 88, 110, 111, 333, 334, 376, 377, 1396 |
| SduI | GDGCHC | 1 cut(s) | 1472 |
| SfcI | CTRYAG | 1 cut(s) | 1700 |
| Sfr274I | CTCGAG | 1 cut(s) | 1376 |
| SinI | GGWCC | 3 cut(s) | 93, 370, 1843 |
| SlaI | CTCGAG | 1 cut(s) | 1376 |
| SmaI | CCCGGG | 3 cut(s) | 111, 334, 377 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1729, 2043 |
| SmlI | CTYRAG | 4 cut(s) | 818, 1376, 1463, 1655 |
| SmoI | CTYRAG | 4 cut(s) | 818, 1376, 1463, 1655 |
| SphI | GCATGC | 2 cut(s) | 1709, 2065 |
| SspI | AATATT | 2 cut(s) | 1945, 1957 |
| SspMI | CTAG | 1 cut(s) | 543 |
| SstI | GAGCTC | 1 cut(s) | 1472 |
| StyD4I | CCNGG | 8 cut(s) | 86, 108, 109, 331, 332, 374, 375, 1394 |
| TaaI | ACNGT | 4 cut(s) | 271, 1606, 1691, 2076 |
| TaiI | ACGT | 3 cut(s) | 589, 677, 1192 |
| TaqI | TCGA | 9 cut(s) | 56, 68, 177, 231, 276, 417, 694, 1377, 1600 |
| TatI | WGTACW | 2 cut(s) | 1895, 2032 |
| TauI | GCSGC | 6 cut(s) | 29, 32, 213, 428, 1539, 1997 |
| TfiI | GAWTC | 2 cut(s) | 1874, 2014 |
| Tru1I | TTAA | 2 cut(s) | 6, 738 |
| Tru9I | TTAA | 2 cut(s) | 6, 738 |
| TscAI | CASTG | 7 cut(s) | 480, 793, 924, 1015, 1644, 1736, 1941 |
| TseFI | GTSAC | 3 cut(s) | 124, 253, 1526 |
| TseI | GCWGC | 5 cut(s) | 491, 623, 726, 1702, 2052 |
| Tsp45I | GTSAC | 3 cut(s) | 124, 253, 1526 |
| TspDTI | ATGAA | 5 cut(s) | 239, 451, 963, 1435, 2061 |
| TspGWI | ACGGA | 2 cut(s) | 254, 1283 |
| TspMI | CCCGGG | 3 cut(s) | 109, 332, 375 |
| TspRI | CASTG | 7 cut(s) | 480, 793, 924, 1015, 1644, 1736, 1941 |
| VpaK11BI | GGWCC | 3 cut(s) | 93, 370, 1843 |
| VspI | ATTAAT | 1 cut(s) | 738 |
| XapI | RAATTY | 5 cut(s) | 555, 765, 964, 1284, 1988 |
| XceI | RCATGY | 3 cut(s) | 1709, 1838, 2065 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1853 |
| XhoI | CTCGAG | 1 cut(s) | 1376 |
| XmaI | CCCGGG | 3 cut(s) | 109, 332, 375 |
| XmiI | GTMKAC | 1 cut(s) | 671 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1191 |
| XspI | CTAG | 1 cut(s) | 543 |
| ZrmI | AGTACT | 1 cut(s) | 2034 |
| Zsp2I | ATGCAT | 1 cut(s) | 1028 |