Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0010667

Physical Location & Seq

Genomic Coordinates Reverse (-)

58043402 .. 58046549

Gene Structure 3148 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000004292

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2076 bp

ATGGCATTTGGCGCGTTTTTTCCGCATATGCAACCAACGGTCACGAAAACCCGAAAGCCAGAGCCCTTCACCGGCCTTCCTTCCCCCAACAAATCTAACTCTCTCTCTCACTCTCTCTCTGCTTTGGATGCCCCGAACATGGTGCACAGCTTCCAACCCTACGCGGCGGCCTCGGCCCGCTTCCGGCAAATCTCGGTGCCCTTCAACCTGCGCAAGACAAAGCCATGGTGGTCGGAGATCTTGGACCCGGGATCTGAAACAGTGACACGGTGGAACTACATCTTCTTCGTGATCTGCATCATGGGCCTCTTCCTCGACCCCCTTTTCTTCTTCTTACCCCTCATCGGCGGAAAAGCCTGCATGGAGACCGACCTCCAAATCAGCATCTACGTCACCTCCATCCGCACAATCGCCGACTTGTTCTACGTCTTCCACATTATCATCAAGTTTCGTATTGCCTTTATTGCCCCTGGCTCTAGGGTTTTCGGCCGCGGCCAGCTCGTTAAGGATCCCTGGGCCATTGCCTCGCGCTACCTCAAAAAGGACTTCTCCATTGACCTAGCCGCCTGTCTACCACTCCCTCAGTACGTAATGTGTTATTATTATTGGTTTATTGTTGGATCTTCGTGGTATGTGTTGTCCATTAAACGGCAGTACGAGTGTTGGAAACAGGAATGTGGAAAGGAACAGAATGGGACGCACTCTCCATCCTGTAATCTTGAGTTTCTTGATTGTAAAACTACAAATAATCGTGAACGCCAAGCTTGGTTGGAGAAAACAAACGTGAGTGAGAACTGCGATGCTATAAATGATGAGGGAAAATTTCAGTTTGGAATGTTTAAAGAGGCATTCAAAAATGACGTCGCTTCTGCACCCTTCATTAGTAAATATTTCTATTGCCTTTGGTGGGGTATGAGAAATTTATGTGCATATGGACAAGATATTGAAGTAAGCACTATGGTTGGTGAAACCTCGTTTTGCATTACCATTGCATCAATTGGCCTCGTCCAGTTTTCACATCTCATGAGTCAGATACAGACCTTTCTGCAATCTACGACGGCTAGACTTGAAGAGTGGAGGGTCAAAAGAAGAGACACAGAGGAGTGGATGAGGCACCGCCAACTCCCTCCAGAATTGCAAGAACGTGTGCGTCGGTTTGTTCAATATCAGTGGATTGCCACAAGAGGTGTTGATGAAAAATCCATCTTAAATTCCCTGCCTTTGGATATACGACGTCAAATTCAAAGGCATCTATGCCTTGCCCATGTTCGCCGAGTTCCCTTCTTCGCACAAATGGATGATCAGCTCTTGGACGCCATATGCGAACGCCTCAAGTCATCCTTAAATACCAGAGACACACACATCTTTCGGGAAGGTGCTCCGGTGAGTGAGATGCTTTTCATTGTCAGAGGGCAACTCGAAAGCTCCACTACTGATGGTGGAAGGACAGGATTCTTCAACTCCATCACCCTAAGAGCCGGTGACTTCTGTGGTGAAGAGTTGCTGACATGGGCCTTAATGCCTTCATCCAGTCTAAACCTTCCGGTCTCAACTCGAACTGTGAAGTCCCTCACTGAAGTCGAGGCATTTGCACTCCGAGCTGAAGACCTCAAGTACGTTGCGAGTCAATTTAAGCGCCTTCACAGCAAAAAACTGCAGCACGCATTTAGGTACTACTCCCACCAGTGGAGGACTTGGGGAGCTTGTTATATACAAGTTGCGTGGAGACGACACAAAAAGAGGAAGTTGGCGTTGGATTTGTTAAGAGAGGAGGAGTACTATTACACACATGTTTTGGACCAAGACCCTGACTATAACAATGGATCAACTAGTGGTGCAGACGACGATGACGACGACAACGACGATGAAGGTCCAAGTAAGACCTCATCGCTGCGTCGTATGGCAGAGCAATTGCACATTCCACTCGGGCCTGCAATTTTGGCTTCGAAGTTTGCTGCAACCACCAAAAGAGGACTTCGGAAGGTGGCAACACGGCTTGACCGTGAAACTAGCAGTGCCAAAATGCCCAAAAAGTTGTTTAAGCCGAACGAGCCAGATTTCTCAAAAGATAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005216 GO:0005244 GO:0005249 GO:0005261 GO:0005267 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0008150 GO:0008324 GO:0009987 GO:0015075 GO:0015077 GO:0015079 GO:0015267 GO:0015318 GO:0015672 GO:0016020 GO:0016021 GO:0022803 GO:0022832 GO:0022836 GO:0022838 GO:0022839 GO:0022843 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0034220 GO:0042391 GO:0044425 GO:0044459 GO:0044464 GO:0046873 GO:0051179 GO:0051234 GO:0055085 GO:0065007 GO:0065008 GO:0071804 GO:0071805 GO:0071944 GO:0098655 GO:0098660 GO:0098662

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

Ion_trans cNMP_binding

Protein Analysis

692

Amino Acids

79.82

Weight (kDa)

8.92

Isoelectric Point (pI)

50.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
cNMP_binding	PF00027	452 - 540	4.7e-06	Cyclic nucleotide-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010667)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G48010
fragaria_vesca	FvH4_5g05660
malus_domestica	MD06G1177300.v1.1 MD14G1183500.v1.1
prunus_persica	Prupe.5G176000_v2.0.a1 Prupe.5G176000_v2.0.a1
pyrus_communis	pycom14g15260
rosa_chinensis	RchiOBHm_Chr7g0193151
rosa_laevigata	RLG00000004292
rosa_multiflora	Rmu_co8354259.1_g000001 Rmu_co8396983.1_g000001 Rmu_ssc0000092.1_g000037
rosa_roxburghii	Rroxscaffold_3G00262340
rosa_rugosa	Rorug07G0008000 Rorug07G0008100
rosa_samantha	Rh7AG133100 Rh7BG134200 Rh7CG137000 Rh7DG135000
rosa_wichuraiana	Rw7G011380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	864, 1237
Acc16I	TGCGCA	1 cut(s)	212
Acc36I	ACCTGC	1 cut(s)	216
AccB1I	GGYRCC	2 cut(s)	196, 1113
AccI	GTMKAC	1 cut(s)	571
AccII	CGCG	4 cut(s)	14, 164, 492, 529
AclWI	GGATC	5 cut(s)	259, 503, 516, 628, 1831
AcoI	YGGCCR	2 cut(s)	487, 493
AcsI	RAATTY	4 cut(s)	821, 919, 1210, 1239
AcuI	CTGAAG	2 cut(s)	1596, 1623
AcyI	GRCGYC	3 cut(s)	861, 1234, 1314
AfaI	GTAC	5 cut(s)	587, 656, 1616, 1673, 1778
AfiI	CCNNNNNNNGG	9 cut(s)	71, 139, 183, 344, 541, 648, 907, 1222, 1686
AflIII	ACRYGT	2 cut(s)	1144, 1789
AgsI	TTSAA	7 cut(s)	205, 853, 947, 1070, 1163, 1244, 1459
AhlI	ACTAGT	1 cut(s)	1829
AjnI	CCWGG	2 cut(s)	469, 512
AjuI	GAANNNNNNNTTGG	2 cut(s)	1736, 1768
AluBI	AGCT	7 cut(s)	150, 499, 764, 1306, 1425, 1601, 1703
AluI	AGCT	7 cut(s)	150, 499, 764, 1306, 1425, 1601, 1703
Alw21I	GWGCWC	2 cut(s)	147, 1381
Alw26I	GTCTC	5 cut(s)	359, 1086, 1347, 1552, 1720
Alw44I	GTGCAC	1 cut(s)	143
AlwI	GGATC	5 cut(s)	259, 503, 516, 628, 1831
Ama87I	CYCGRG	2 cut(s)	247, 1925
ApaLI	GTGCAC	1 cut(s)	143
ApeKI	GCWGC	3 cut(s)	1657, 1891, 1955
ApoI	RAATTY	4 cut(s)	821, 919, 1210, 1239
ArsI	GACNNNNNNTTYG	2 cut(s)	846, 878
AspLEI	GCGC	4 cut(s)	14, 213, 531, 1638
AspS9I	GGNCC	8 cut(s)	175, 244, 304, 516, 1512, 1798, 1871, 1928
AsuC2I	CCSGG	2 cut(s)	248, 249
AsuHPI	GGTGA	7 cut(s)	61, 385, 977, 1396, 1459, 1493, 1505
AsuII	TTCGAA	1 cut(s)	1946
AvaI	CYCGRG	2 cut(s)	247, 1925
AvaII	GGWCC	3 cut(s)	244, 1798, 1871
BaeGI	GKGCMC	2 cut(s)	147, 201
BamHI	GGATCC	1 cut(s)	508
BanI	GGYRCC	2 cut(s)	196, 1113
BanII	GRGCYC	1 cut(s)	66
BbsI	GAAGAC	2 cut(s)	421, 1611
Bbv12I	GWGCWC	2 cut(s)	147, 1381
BbvI	GCAGC	3 cut(s)	1669, 1878, 1942
BccI	CCATC	5 cut(s)	407, 715, 1211, 1430, 1472
BceAI	ACGGC	3 cut(s)	665, 1074, 2009
BcgI	CGANNNNNNTGC	4 cut(s)	124, 158, 1571, 1605
BciT130I	CCWGG	2 cut(s)	471, 514
BclI	TGATCA	1 cut(s)	1300
BcnI	CCSGG	2 cut(s)	248, 249
BcoDI	GTCTC	5 cut(s)	359, 1086, 1347, 1552, 1720
BcuI	ACTAGT	1 cut(s)	1829
BfaI	CTAG	5 cut(s)	477, 560, 1062, 1830, 2010
BfmI	CTRYAG	1 cut(s)	1655
BfoI	RGCGCY	1 cut(s)	1639
BfuAI	ACCTGC	1 cut(s)	216
BglII	AGATCT	1 cut(s)	237
BisI	GCNGC	8 cut(s)	165, 168, 490, 493, 564, 1658, 1892, 1956
BlsI	GCNGC	8 cut(s)	166, 169, 491, 494, 565, 1659, 1893, 1957
BmcAI	AGTACT	1 cut(s)	1778
Bme1390I	CCNGG	4 cut(s)	248, 249, 471, 514
Bme18I	GGWCC	3 cut(s)	244, 1798, 1871
BmeT110I	CYCGRG	2 cut(s)	247, 1925
BmgT120I	GGNCC	8 cut(s)	175, 244, 304, 516, 1512, 1798, 1871, 1928
BmiI	GGNNCC	4 cut(s)	198, 246, 510, 1115
BmrFI	CCNGG	4 cut(s)	248, 249, 471, 514
BmsI	GCATC	7 cut(s)	118, 306, 393, 790, 1001, 1258, 1383
BpiI	GAAGAC	2 cut(s)	421, 1611
BplI	GAGNNNNNCTC	2 cut(s)	1401, 1433
BpmI	CTGGAG	1 cut(s)	1113
Bpu14I	TTCGAA	1 cut(s)	1946
BpuEI	CTTGAG	3 cut(s)	740, 1316, 1595
BpuMI	CCSGG	2 cut(s)	248, 249
BsaAI	YACGTR	1 cut(s)	589
BsaBI	GATNNNNATC	1 cut(s)	296
BsaHI	GRCGYC	3 cut(s)	861, 1234, 1314
BsaI	GGTCTC	2 cut(s)	359, 1552
BsaJI	CCNNGG	7 cut(s)	171, 224, 247, 469, 490, 512, 513
BsaWI	WCCGGW	2 cut(s)	1381, 1543
BsaXI	ACNNNNNCTCC	4 cut(s)	380, 410, 688, 718
Bsc4I	CCNNNNNNNGG	9 cut(s)	71, 139, 183, 344, 541, 648, 907, 1222, 1686
Bse118I	RCCGGY	2 cut(s)	71, 1478
Bse1I	ACTGG	3 cut(s)	1009, 1530, 1684
Bse3DI	GCAATG	2 cut(s)	519, 987
Bse8I	GATNNNNATC	1 cut(s)	296
BseBI	CCWGG	2 cut(s)	471, 514
BseDI	CCNNGG	7 cut(s)	171, 224, 247, 469, 490, 512, 513
BseGI	GGATG	7 cut(s)	133, 399, 707, 1113, 1303, 1337, 1526
BseJI	GATNNNNATC	1 cut(s)	296
BseLI	CCNNNNNNNGG	9 cut(s)	71, 139, 183, 344, 541, 648, 907, 1222, 1686
BseMI	GCAATG	2 cut(s)	519, 987
BseMII	CTCAG	1 cut(s)	596
BseNI	ACTGG	3 cut(s)	1009, 1530, 1684
BseRI	GAGGAG	3 cut(s)	1115, 1784, 1787
BseSI	GKGCMC	2 cut(s)	147, 201
BseX3I	CGGCCG	1 cut(s)	487
BseXI	GCAGC	3 cut(s)	1669, 1878, 1942
BsgI	GTGCAG	2 cut(s)	855, 1857
Bsh1236I	CGCG	4 cut(s)	14, 164, 492, 529
Bsh1285I	CGRYCG	1 cut(s)	490
BshNI	GGYRCC	2 cut(s)	196, 1113
BsiEI	CGRYCG	1 cut(s)	490
BsiHKAI	GWGCWC	2 cut(s)	147, 1381
BsiHKCI	CYCGRG	2 cut(s)	247, 1925
BsiSI	CCGG	6 cut(s)	72, 184, 248, 1382, 1479, 1544
BslFI	GGGAC	2 cut(s)	709, 1552
BslI	CCNNNNNNNGG	9 cut(s)	71, 139, 183, 344, 541, 648, 907, 1222, 1686
BsmAI	GTCTC	5 cut(s)	359, 1086, 1347, 1552, 1720
BsmBI	CGTCTC	1 cut(s)	1720
BsmFI	GGGAC	2 cut(s)	709, 1552
BsmI	GAATGC	1 cut(s)	848
Bso31I	GGTCTC	2 cut(s)	359, 1552
BsoBI	CYCGRG	2 cut(s)	247, 1925
Bsp119I	TTCGAA	1 cut(s)	1946
Bsp1286I	GDGCHC	4 cut(s)	66, 147, 201, 1381
Bsp143I	GATC	7 cut(s)	237, 251, 291, 508, 620, 1300, 1823
Bsp19I	CCATGG	1 cut(s)	224
BspCNI	CTCAG	1 cut(s)	595
BspFNI	CGCG	4 cut(s)	14, 164, 492, 529
BspHI	TCATGA	1 cut(s)	1023
BspLI	GGNNCC	4 cut(s)	198, 246, 510, 1115
BspMAI	CTGCAG	1 cut(s)	1659
BspMI	ACCTGC	1 cut(s)	216
BspPI	GGATC	5 cut(s)	259, 503, 516, 628, 1831
BspT104I	TTCGAA	1 cut(s)	1946
BspT107I	GGYRCC	2 cut(s)	196, 1113
BspTNI	GGTCTC	2 cut(s)	359, 1552
BsrDI	GCAATG	2 cut(s)	519, 987
BsrFI	RCCGGY	2 cut(s)	71, 1478
BsrI	ACTGG	3 cut(s)	1009, 1530, 1684
BssAI	RCCGGY	2 cut(s)	71, 1478
BssECI	CCNNGG	7 cut(s)	171, 224, 247, 469, 490, 512, 513
BssMI	GATC	7 cut(s)	237, 251, 291, 508, 620, 1300, 1823
BssNI	GRCGYC	3 cut(s)	861, 1234, 1314
BssT1I	CCWWGG	1 cut(s)	224
Bst2UI	CCWGG	2 cut(s)	471, 514
Bst4CI	ACNGT	5 cut(s)	40, 262, 270, 1561, 2003
Bst6I	CTCTTC	4 cut(s)	314, 1065, 1084, 1491
BstACI	GRCGYC	3 cut(s)	861, 1234, 1314
BstBAI	YACGTR	1 cut(s)	589
BstBI	TTCGAA	1 cut(s)	1946
BstC8I	GCNNGC	5 cut(s)	178, 358, 497, 1662, 1932
BstDEI	CTNAG	2 cut(s)	582, 1472
BstDSI	CCRYGG	2 cut(s)	224, 490
BstENI	CCTNNNNNAGG	1 cut(s)	539
BstF5I	GGATG	7 cut(s)	133, 399, 707, 1113, 1303, 1337, 1526
BstFNI	CGCG	4 cut(s)	14, 164, 492, 529
BstH2I	RGCGCY	1 cut(s)	1639
BstHHI	GCGC	4 cut(s)	14, 213, 531, 1638
BstKTI	GATC	7 cut(s)	240, 254, 294, 511, 623, 1303, 1826
BstMAI	GTCTC	5 cut(s)	359, 1086, 1347, 1552, 1720
BstMBI	GATC	7 cut(s)	237, 251, 291, 508, 620, 1300, 1823
BstMCI	CGRYCG	1 cut(s)	490
BstMWI	GCNNNNNNNGC	9 cut(s)	11, 128, 173, 303, 464, 1598, 1644, 1940, 2050
BstNI	CCWGG	2 cut(s)	471, 514
BstNSI	RCATGY	1 cut(s)	1793
BstSCI	CCNGG	4 cut(s)	246, 247, 469, 512
BstSFI	CTRYAG	1 cut(s)	1655
BstSLI	GKGCMC	2 cut(s)	147, 201
BstSNI	TACGTA	1 cut(s)	589
BstUI	CGCG	4 cut(s)	14, 164, 492, 529
BstV1I	GCAGC	3 cut(s)	1669, 1878, 1942
BstV2I	GAAGAC	2 cut(s)	421, 1611
BstX2I	RGATCY	4 cut(s)	237, 251, 508, 620
BstYI	RGATCY	4 cut(s)	237, 251, 508, 620
BstZI	CGGCCG	1 cut(s)	487
BtgI	CCRYGG	2 cut(s)	224, 490
BtgZI	GCGATG	2 cut(s)	813, 1872
BtsCI	GGATG	7 cut(s)	133, 399, 707, 1113, 1303, 1337, 1526
BtsI	GCAGTG	1 cut(s)	2020
BtsIMutI	CAGTG	5 cut(s)	267, 1175, 1572, 1691, 2020
BveI	ACCTGC	1 cut(s)	216
Cac8I	GCNNGC	5 cut(s)	178, 358, 497, 1662, 1932
CciI	TCATGA	1 cut(s)	1023
CfoI	GCGC	4 cut(s)	14, 213, 531, 1638
Cfr10I	RCCGGY	2 cut(s)	71, 1478
Cfr13I	GGNCC	8 cut(s)	175, 244, 304, 516, 1512, 1798, 1871, 1928
Cfr42I	CCGCGG	1 cut(s)	493
Cfr9I	CCCGGG	1 cut(s)	247
CseI	GACGC	4 cut(s)	706, 1139, 1322, 1883
Csp6I	GTAC	5 cut(s)	586, 655, 1615, 1672, 1777
CspCI	CAANNNNNGTGG	4 cut(s)	1151, 1186, 1703, 1738
CviAII	CATG	8 cut(s)	139, 225, 301, 361, 1024, 1265, 1509, 1790
CviQI	GTAC	5 cut(s)	586, 655, 1615, 1672, 1777
DdeI	CTNAG	2 cut(s)	582, 1472
DpnI	GATC	7 cut(s)	239, 253, 293, 510, 622, 1302, 1825
DpnII	GATC	7 cut(s)	237, 251, 291, 508, 620, 1300, 1823
DraI	TTTAAA	1 cut(s)	841
EaeI	YGGCCR	2 cut(s)	487, 493
EagI	CGGCCG	1 cut(s)	487
Eam1104I	CTCTTC	4 cut(s)	314, 1065, 1084, 1491
EarI	CTCTTC	4 cut(s)	314, 1065, 1084, 1491
EciI	GGCGGA	1 cut(s)	363
EclXI	CGGCCG	1 cut(s)	487
Eco105I	TACGTA	1 cut(s)	589
Eco130I	CCWWGG	1 cut(s)	224
Eco24I	GRGCYC	1 cut(s)	66
Eco31I	GGTCTC	2 cut(s)	359, 1552
Eco47I	GGWCC	3 cut(s)	244, 1798, 1871
Eco52I	CGGCCG	1 cut(s)	487
Eco57I	CTGAAG	2 cut(s)	1596, 1623
Eco88I	CYCGRG	2 cut(s)	247, 1925
EcoNI	CCTNNNNNAGG	1 cut(s)	539
EcoRII	CCWGG	2 cut(s)	469, 512
EcoT14I	CCWWGG	1 cut(s)	224
EcoT38I	GRGCYC	1 cut(s)	66
ErhI	CCWWGG	1 cut(s)	224
Esp3I	CGTCTC	1 cut(s)	1720
FaeI	CATG	8 cut(s)	142, 228, 304, 364, 1027, 1268, 1512, 1793
FalI	AAGNNNNNCTT	2 cut(s)	1325, 1357
FaqI	GGGAC	2 cut(s)	709, 1552
FatI	CATG	8 cut(s)	138, 224, 300, 360, 1023, 1264, 1508, 1789
FauI	CCCGC	1 cut(s)	185
FauNDI	CATATG	3 cut(s)	27, 931, 1319
FbaI	TGATCA	1 cut(s)	1300
FblI	GTMKAC	1 cut(s)	571
Fnu4HI	GCNGC	8 cut(s)	165, 168, 490, 493, 564, 1658, 1892, 1956
FokI	GGATG	7 cut(s)	140, 386, 694, 1120, 1310, 1324, 1513
FriOI	GRGCYC	1 cut(s)	66
Fsp4HI	GCNGC	8 cut(s)	165, 168, 490, 493, 564, 1658, 1892, 1956
FspBI	CTAG	5 cut(s)	477, 560, 1062, 1830, 2010
FspI	TGCGCA	1 cut(s)	212
GlaI	GCGC	4 cut(s)	13, 212, 530, 1637
GluI	GCNGC	8 cut(s)	165, 168, 490, 493, 564, 1658, 1892, 1956
GsuI	CTGGAG	1 cut(s)	1113
HaeII	RGCGCY	1 cut(s)	1639
HapII	CCGG	6 cut(s)	72, 184, 248, 1382, 1479, 1544
HgaI	GACGC	4 cut(s)	706, 1139, 1322, 1883
HhaI	GCGC	4 cut(s)	14, 213, 531, 1638
Hin1I	GRCGYC	3 cut(s)	861, 1234, 1314
Hin1II	CATG	8 cut(s)	142, 228, 304, 364, 1027, 1268, 1512, 1793
Hin6I	GCGC	4 cut(s)	12, 211, 529, 1636
HinP1I	GCGC	4 cut(s)	12, 211, 529, 1636
HindIII	AAGCTT	1 cut(s)	762
HinfI	GANTC	3 cut(s)	1027, 1452, 1624
HpaII	CCGG	6 cut(s)	72, 184, 248, 1382, 1479, 1544
HphI	GGTGA	7 cut(s)	61, 385, 977, 1396, 1459, 1493, 1505
Hpy166II	GTNNAC	3 cut(s)	145, 572, 755
Hpy188I	TCNGA	6 cut(s)	235, 256, 1032, 1409, 1598, 1980
Hpy188III	TCNNGA	8 cut(s)	43, 289, 719, 728, 752, 1024, 1130, 1370
Hpy8I	GTNNAC	3 cut(s)	145, 572, 755
Hpy99I	CGWCG	8 cut(s)	866, 1060, 1155, 1236, 1847, 1856, 1865, 1899
HpyCH4III	ACNGT	5 cut(s)	40, 262, 270, 1561, 2003
HpyCH4IV	ACGT	8 cut(s)	390, 426, 588, 783, 861, 1144, 1234, 1617
HpyF10VI	GCNNNNNNNGC	9 cut(s)	11, 128, 173, 303, 464, 1598, 1644, 1940, 2050
HpyF3I	CTNAG	2 cut(s)	582, 1472
HpySE526I	ACGT	8 cut(s)	390, 426, 588, 783, 861, 1144, 1234, 1617
Hsp92I	GRCGYC	3 cut(s)	861, 1234, 1314
Hsp92II	CATG	8 cut(s)	142, 228, 304, 364, 1027, 1268, 1512, 1793
HspAI	GCGC	4 cut(s)	12, 211, 529, 1636
Ksp22I	TGATCA	1 cut(s)	1300
KspI	CCGCGG	1 cut(s)	493
Kzo9I	GATC	7 cut(s)	237, 251, 291, 508, 620, 1300, 1823
LmnI	GCTCC	3 cut(s)	1384, 1430, 1700
Lsp1109I	GCAGC	3 cut(s)	1669, 1878, 1942
LweI	GCATC	7 cut(s)	118, 306, 393, 790, 1001, 1258, 1383
MaeI	CTAG	5 cut(s)	477, 560, 1062, 1830, 2010
MaeII	ACGT	8 cut(s)	390, 426, 588, 783, 861, 1144, 1234, 1617
MaeIII	GTNAC	4 cut(s)	40, 262, 391, 1481
MalI	GATC	7 cut(s)	239, 253, 293, 510, 622, 1302, 1825
MboI	GATC	7 cut(s)	237, 251, 291, 508, 620, 1300, 1823
MfeI	CAATTG	2 cut(s)	996, 1910
MflI	RGATCY	4 cut(s)	237, 251, 508, 620
MhlI	GDGCHC	4 cut(s)	66, 147, 201, 1381
MluCI	AATT	9 cut(s)	821, 919, 996, 1133, 1210, 1239, 1628, 1910, 1935
MlyI	GAGTC	2 cut(s)	1036, 1633
MmeI	TCCRAC	6 cut(s)	178, 213, 598, 644, 750, 1734
MseI	TTAA	9 cut(s)	504, 645, 840, 1208, 1343, 1517, 1632, 1763, 2040
MspA1I	CMGCKG	1 cut(s)	492
MspI	CCGG	6 cut(s)	72, 184, 248, 1382, 1479, 1544
MspR9I	CCNGG	4 cut(s)	248, 249, 471, 514
MunI	CAATTG	2 cut(s)	996, 1910
Mva1269I	GAATGC	1 cut(s)	848
MvaI	CCWGG	2 cut(s)	471, 514
MvnI	CGCG	4 cut(s)	14, 164, 492, 529
MwoI	GCNNNNNNNGC	9 cut(s)	11, 128, 173, 303, 464, 1598, 1644, 1940, 2050
NciI	CCSGG	2 cut(s)	248, 249
NcoI	CCATGG	1 cut(s)	224
NdeI	CATATG	3 cut(s)	27, 931, 1319
NdeII	GATC	7 cut(s)	237, 251, 291, 508, 620, 1300, 1823
NlaIII	CATG	8 cut(s)	142, 228, 304, 364, 1027, 1268, 1512, 1793
NlaIV	GGNNCC	4 cut(s)	198, 246, 510, 1115
NmeAIII	GCCGAG	2 cut(s)	152, 1298
NmuCI	GTSAC	4 cut(s)	40, 262, 391, 1481
NsbI	TGCGCA	1 cut(s)	212
NspI	RCATGY	1 cut(s)	1793
NspV	TTCGAA	1 cut(s)	1946
PagI	TCATGA	1 cut(s)	1023
PasI	CCCWGGG	1 cut(s)	513
PciI	ACATGT	1 cut(s)	1789
PcsI	WCGNNNNNNNCGW	6 cut(s)	1320, 1848, 1851, 1857, 1860, 1999
PctI	GAATGC	1 cut(s)	848
PfeI	GAWTC	1 cut(s)	1452
PkrI	GCNGC	8 cut(s)	166, 169, 491, 494, 565, 1659, 1893, 1957
PleI	GAGTC	2 cut(s)	1035, 1632
PpsI	GAGTC	2 cut(s)	1035, 1632
Ppu21I	YACGTR	1 cut(s)	589
PscI	ACATGT	1 cut(s)	1789
Psp6I	CCWGG	2 cut(s)	469, 512
PspGI	CCWGG	2 cut(s)	469, 512
PspN4I	GGNNCC	4 cut(s)	198, 246, 510, 1115
PspPI	GGNCC	8 cut(s)	175, 244, 304, 516, 1512, 1798, 1871, 1928
PstI	CTGCAG	1 cut(s)	1659
PsuI	RGATCY	4 cut(s)	237, 251, 508, 620
RsaI	GTAC	5 cut(s)	587, 656, 1616, 1673, 1778
RsaNI	GTAC	5 cut(s)	586, 655, 1615, 1672, 1777
SacII	CCGCGG	1 cut(s)	493
SaqAI	TTAA	9 cut(s)	504, 645, 840, 1208, 1343, 1517, 1632, 1763, 2040
SatI	GCNGC	8 cut(s)	165, 168, 490, 493, 564, 1658, 1892, 1956
Sau3AI	GATC	7 cut(s)	237, 251, 291, 508, 620, 1300, 1823
Sau96I	GGNCC	8 cut(s)	175, 244, 304, 516, 1512, 1798, 1871, 1928
ScaI	AGTACT	1 cut(s)	1778
SchI	GAGTC	2 cut(s)	1036, 1633
ScrFI	CCNGG	4 cut(s)	248, 249, 471, 514
SduI	GDGCHC	4 cut(s)	66, 147, 201, 1381
SfaNI	GCATC	7 cut(s)	118, 306, 393, 790, 1001, 1258, 1383
SfcI	CTRYAG	1 cut(s)	1655
Sfr303I	CCGCGG	1 cut(s)	493
SfuI	TTCGAA	1 cut(s)	1946
SgrBI	CCGCGG	1 cut(s)	493
SinI	GGWCC	3 cut(s)	244, 1798, 1871
SmaI	CCCGGG	1 cut(s)	249
SmlI	CTYRAG	3 cut(s)	719, 1331, 1610
SmoI	CTYRAG	3 cut(s)	719, 1331, 1610
SnaBI	TACGTA	1 cut(s)	589
SpeI	ACTAGT	1 cut(s)	1829
Sse9I	AATT	9 cut(s)	821, 919, 996, 1133, 1210, 1239, 1628, 1910, 1935
SspI	AATATT	1 cut(s)	890
SspMI	CTAG	5 cut(s)	477, 560, 1062, 1830, 2010
StyD4I	CCNGG	4 cut(s)	246, 247, 469, 512
StyI	CCWWGG	1 cut(s)	224
TaaI	ACNGT	5 cut(s)	40, 262, 270, 1561, 2003
TaiI	ACGT	8 cut(s)	393, 429, 591, 786, 864, 1147, 1237, 1620
TaqI	TCGA	5 cut(s)	315, 1419, 1555, 1581, 1946
TaqII	GACCGA	1 cut(s)	383
TasI	AATT	9 cut(s)	821, 919, 996, 1133, 1210, 1239, 1628, 1910, 1935
TatI	WGTACW	1 cut(s)	1776
TauI	GCSGC	5 cut(s)	167, 170, 492, 495, 566
TfiI	GAWTC	1 cut(s)	1452
Tru1I	TTAA	9 cut(s)	504, 645, 840, 1208, 1343, 1517, 1632, 1763, 2040
Tru9I	TTAA	9 cut(s)	504, 645, 840, 1208, 1343, 1517, 1632, 1763, 2040
TscAI	CASTG	5 cut(s)	267, 1175, 1579, 1691, 2020
TseFI	GTSAC	4 cut(s)	40, 262, 391, 1481
TseI	GCWGC	3 cut(s)	1657, 1891, 1955
Tsp45I	GTSAC	4 cut(s)	40, 262, 391, 1481
TspDTI	ATGAA	5 cut(s)	868, 1209, 1390, 1515, 1881
TspMI	CCCGGG	1 cut(s)	247
TspRI	CASTG	5 cut(s)	267, 1175, 1579, 1691, 2020
VneI	GTGCAC	1 cut(s)	143
VpaK11BI	GGWCC	3 cut(s)	244, 1798, 1871
XagI	CCTNNNNNAGG	1 cut(s)	539
XapI	RAATTY	4 cut(s)	821, 919, 1210, 1239
XceI	RCATGY	1 cut(s)	1793
XmaI	CCCGGG	1 cut(s)	247
XmiI	GTMKAC	1 cut(s)	571
XspI	CTAG	5 cut(s)	477, 560, 1062, 1830, 2010
ZraI	GACGTC	2 cut(s)	862, 1235
ZrmI	AGTACT	1 cut(s)	1778

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.