MD15G1081400.v1.1

Remorin, C-terminal region

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0003813
Physical Location & Seq
Reverse (-)
5590170 .. 5593217
3048 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1081400.v1.1.491

Sequence Viewer

Length: 1530 bp
ATGCAGCAGAACTCGGCCCCACGCGATCGCCGCCACGAGGAAAGCTCGAGTGGTCCAGATCGCGATCCGGATCCGAACAGAATCCACGCTTTTCAGCACACTCGTCGTCTCTCCGGAAAGGGCGAAAAAGCCAAAGTTCAAAAGGAGGACTCCGACTCGGATTTCGTCCTCGATTCCGCCAGAAGCTCCTTCTCTCTCGCCCTCAAAGAATGCCAGGACCGGCGGTCCAGATCTGAAGCTTTATCGAAGAAGTTAGACCGGCCGAGACCCGCCTCGTTGGACTTGAACAACAATGCCTCTGTGTCCTCGCCGAGATTAGGCGCGATAAAGAAGGGTTCAATGGCGTCTCGGAAATCGGGTAACTTCCCCAGTCCCGGCACACCGAGTTACCGGCACGCGAGTCTCGGAGTTCAGAAGGGTTGGAGCTCGGAGCGAGTCCCGTCGCATACCAATGTGGGTCGGAAGAATACGACGGCTGCGATGTTGCCCTTTAATAACGGGAGGACATTGCCGTCTAAGTGGGAAGATGCTGAGAGATGGATTTTGAGTCCGGTTCAGGGGGATGGCGTGGTGAGGCCAGCTTATCAGCAAACCCAGAGGCGGCCCAAGTCGAAGAGTGGTCCGCTCGGGCCTCCTGGGGTTGCGTATTACTCATTGTACTCGCCGGCAATGCCAATGTTTGATGGGACCAATGTGAGTAATTTCATGGCTGCTTCTCCGTTTTCGGCTGCTGTTATATCAGCTGATGGGTTGGGGTTCCAGTCCGGTGCCGAAAATGGCAGCTTTACGACGCGAGCAGAGCCATGCATTGCTCGTTCGGTTAGCGTTCATGGTTGCTCTGAGGTGCTGGAGCAGCAGTCTTCATTGCCTGACTCTCAAGATGAAAAGTTTGATGGCCCTAATGGGGTCAAGGATGCGGCTACGAATGTATCTCGGGCAGTTTCAAGAAGGGACATGGCAACCCAGATGAGCCCAGATAGCGCTCACTCATCTCCCAGGGCACGGGCTTCTTACTCTGCCTCCACTTCCTCTGGTCTGCCTATTTTGGAAGTGCAGAGTGCGGCTTCTTCAAAGTCGGAAGTCAGGGATGTGCAGGTAGATGAACGGGTCACTATGACAAGGTGGTCCAAGAAGCATAAAGCTCGGAGGCCTGGGAAGGGTTCTCTTATTGGTGATGGTTGGAAAAAGAAAGATGCAGACGTTCAATCTGCTGCTTGGGATCTCTCTGACACGTCAAAGAGCATTTCAAAAGTTAATAGAGAGGAAGCAAAAATCACTGCTTGGGAGAACCTGCAGAGGGCAAAAGCTGAGGCAGCAATACGGAAACTGGAGATGAAGCTTGAAAAAAAGCGATCGTCATCAATGGATAAAATCATGAACAAGTTGAGATCGGCTCAGAAGAAAGCTCAAGACATGAGAAGCTCAGTTGACCAAGCACAAGTTGCAAGGACCTCACGTAAAGCTTTATCAATCCGAATAACTCGTCATATGGGTTCTTTCAGTGGTTGTTTTACATGCCATACTTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Remorin_C

Protein Analysis

510

Amino Acids

55.69

Weight (kDa)

10.04

Isoelectric Point (pI)

56.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Remorin_C PF03763 401 - 497 2e-24 Remorin, C-terminal region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 511, 1123
Acc36I ACCTGC 2 cut(s) 1084, 1299
AccB1I GGYRCC 1 cut(s) 767
AccBSI CCGCTC 1 cut(s) 625
AccII CGCG 5 cut(s) 24, 63, 323, 398, 793
AccIII TCCGGA 2 cut(s) 67, 113
AciI CCGC 8 cut(s) 31, 177, 223, 270, 601, 623, 917, 1061
AclWI GGATC 4 cut(s) 59, 65, 78, 1227
AcoI YGGCCR 1 cut(s) 260
AcuI CTGAAG 1 cut(s) 255
AcyI GRCGYC 1 cut(s) 344
AfaI GTAC 1 cut(s) 659
AfeI AGCGCT 1 cut(s) 982
AfiI CCNNNNNNNGG 9 cut(s) 37, 317, 374, 557, 600, 904, 1002, 1157, 1297
AflIII ACRYGT 1 cut(s) 1230
AgsI TTSAA 8 cut(s) 140, 286, 339, 945, 1071, 1205, 1248, 1343
AhdI GACNNNNNGTC 1 cut(s) 223
AjiI CACGTC 1 cut(s) 1233
AjnI CCWGG 4 cut(s) 213, 634, 995, 1150
Alw21I GWGCWC 1 cut(s) 428
Alw26I GTCTC 4 cut(s) 113, 259, 351, 407
AlwI GGATC 4 cut(s) 59, 65, 78, 1227
Ama87I CYCGRG 3 cut(s) 46, 626, 933
Aor13HI TCCGGA 2 cut(s) 67, 113
Aor51HI AGCGCT 1 cut(s) 982
AoxI GGCC 7 cut(s) 15, 260, 575, 602, 629, 895, 1148
ApeKI GCWGC 8 cut(s) 4, 476, 710, 728, 780, 853, 1211, 1313
ArsI GACNNNNNNTTYG 4 cut(s) 146, 178, 1468, 1500
AsiSI GCGATCGC 1 cut(s) 28
AspLEI GCGC 2 cut(s) 323, 983
AsuC2I CCSGG 1 cut(s) 375
AsuHPI GGTGA 2 cut(s) 583, 1184
AvaI CYCGRG 3 cut(s) 46, 626, 933
AvaII GGWCC 7 cut(s) 53, 217, 225, 620, 687, 1125, 1449
BaeGI GKGCMC 1 cut(s) 1003
BaeI ACNNNNGTAYC 2 cut(s) 912, 945
BamHI GGATCC 1 cut(s) 70
BanI GGYRCC 1 cut(s) 767
BanII GRGCYC 2 cut(s) 428, 974
BauI CACGAG 1 cut(s) 35
BbsI GAAGAC 1 cut(s) 852
Bbv12I GWGCWC 1 cut(s) 428
BbvCI CCTCAGC 1 cut(s) 1308
BbvI GCAGC 8 cut(s) 16, 463, 697, 715, 792, 865, 1198, 1325
BccI CCATC 6 cut(s) 531, 557, 677, 740, 887, 1169
BceAI ACGGC 2 cut(s) 489, 496
BcgI CGANNNNNNTGC 4 cut(s) 86, 120, 1124, 1158
BciT130I CCWGG 4 cut(s) 215, 636, 997, 1152
BcnI CCSGG 1 cut(s) 375
BcoDI GTCTC 4 cut(s) 113, 259, 351, 407
BfmI CTRYAG 1 cut(s) 1292
BfoI RGCGCY 1 cut(s) 984
BfuAI ACCTGC 2 cut(s) 1084, 1299
BglII AGATCT 1 cut(s) 230
Bme1390I CCNGG 5 cut(s) 215, 375, 636, 997, 1152
Bme18I GGWCC 7 cut(s) 53, 217, 225, 620, 687, 1125, 1449
BmeRI GACNNNNNGTC 1 cut(s) 223
BmeT110I CYCGRG 3 cut(s) 46, 626, 933
BmgBI CACGTC 1 cut(s) 1233
BmiI GGNNCC 5 cut(s) 18, 72, 688, 758, 769
BmrFI CCNGG 5 cut(s) 215, 375, 636, 997, 1152
BmrI ACTGGG 1 cut(s) 363
BmsI GCATC 3 cut(s) 517, 904, 1183
BmuI ACTGGG 1 cut(s) 363
BpiI GAAGAC 1 cut(s) 852
BplI GAGNNNNNCTC 4 cut(s) 29, 61, 1378, 1410
BpmI CTGGAG 2 cut(s) 869, 1349
Bpu10I CCTNAGC 1 cut(s) 1308
BpuEI CTTGAG 2 cut(s) 861, 1392
BpuMI CCSGG 1 cut(s) 375
BsaAI YACGTR 1 cut(s) 1457
BsaBI GATNNNNATC 3 cut(s) 63, 69, 1357
BsaHI GRCGYC 1 cut(s) 344
BsaI GGTCTC 1 cut(s) 259
BsaJI CCNNGG 4 cut(s) 635, 995, 996, 1151
BsaWI WCCGGW 4 cut(s) 67, 113, 550, 764
BsaXI ACNNNNNCTCC 4 cut(s) 842, 872, 1004, 1034
Bsc4I CCNNNNNNNGG 9 cut(s) 37, 317, 374, 557, 600, 904, 1002, 1157, 1297
Bse118I RCCGGY 4 cut(s) 219, 258, 390, 664
Bse1I ACTGG 3 cut(s) 369, 760, 1332
Bse3DI GCAATG 4 cut(s) 506, 675, 807, 863
Bse8I GATNNNNATC 3 cut(s) 63, 69, 1357
BseAI TCCGGA 2 cut(s) 67, 113
BseBI CCWGG 4 cut(s) 215, 636, 997, 1152
BseDI CCNNGG 4 cut(s) 635, 995, 996, 1151
BseGI GGATG 3 cut(s) 568, 919, 1093
BseJI GATNNNNATC 3 cut(s) 63, 69, 1357
BseLI CCNNNNNNNGG 9 cut(s) 37, 317, 374, 557, 600, 904, 1002, 1157, 1297
BseMI GCAATG 4 cut(s) 506, 675, 807, 863
BseMII CTCAG 5 cut(s) 522, 831, 1299, 1409, 1437
BseNI ACTGG 3 cut(s) 369, 760, 1332
BseSI GKGCMC 1 cut(s) 1003
BseX3I CGGCCG 1 cut(s) 260
BseXI GCAGC 8 cut(s) 16, 463, 697, 715, 792, 865, 1198, 1325
BsgI GTGCAG 2 cut(s) 1073, 1112
Bsh1236I CGCG 5 cut(s) 24, 63, 323, 398, 793
Bsh1285I CGRYCG 3 cut(s) 28, 263, 1355
BshFI GGCC 7 cut(s) 17, 262, 577, 604, 631, 897, 1150
BshNI GGYRCC 1 cut(s) 767
BsiEI CGRYCG 3 cut(s) 28, 263, 1355
BsiHKAI GWGCWC 1 cut(s) 428
BsiHKCI CYCGRG 3 cut(s) 46, 626, 933
BsiSI CCGG 9 cut(s) 68, 114, 220, 259, 375, 391, 551, 665, 765
BslFI GGGAC 4 cut(s) 357, 422, 700, 965
BslI CCNNNNNNNGG 9 cut(s) 37, 317, 374, 557, 600, 904, 1002, 1157, 1297
BsmAI GTCTC 4 cut(s) 113, 259, 351, 407
BsmBI CGTCTC 2 cut(s) 113, 351
BsmFI GGGAC 4 cut(s) 357, 422, 700, 965
BsmI GAATGC 1 cut(s) 215
BsnI GGCC 7 cut(s) 17, 262, 577, 604, 631, 897, 1150
Bso31I GGTCTC 1 cut(s) 259
BsoBI CYCGRG 3 cut(s) 46, 626, 933
Bsp1286I GDGCHC 3 cut(s) 428, 974, 1003
Bsp13I TCCGGA 2 cut(s) 67, 113
Bsp143I GATC 8 cut(s) 25, 58, 64, 70, 230, 1219, 1352, 1388
Bsp68I TCGCGA 1 cut(s) 63
BspACI CCGC 8 cut(s) 31, 177, 223, 270, 601, 623, 917, 1061
BspANI GGCC 7 cut(s) 17, 262, 577, 604, 631, 897, 1150
BspCNI CTCAG 5 cut(s) 523, 832, 1300, 1408, 1436
BspEI TCCGGA 2 cut(s) 67, 113
BspFNI CGCG 5 cut(s) 24, 63, 323, 398, 793
BspHI TCATGA 1 cut(s) 1374
BspLI GGNNCC 5 cut(s) 18, 72, 688, 758, 769
BspMAI CTGCAG 1 cut(s) 1296
BspMI ACCTGC 2 cut(s) 1084, 1299
BspPI GGATC 4 cut(s) 59, 65, 78, 1227
BspT107I GGYRCC 1 cut(s) 767
BspTNI GGTCTC 1 cut(s) 259
BsrBI CCGCTC 1 cut(s) 625
BsrDI GCAATG 4 cut(s) 506, 675, 807, 863
BsrFI RCCGGY 4 cut(s) 219, 258, 390, 664
BsrI ACTGG 3 cut(s) 369, 760, 1332
BssAI RCCGGY 4 cut(s) 219, 258, 390, 664
BssECI CCNNGG 4 cut(s) 635, 995, 996, 1151
BssMI GATC 8 cut(s) 25, 58, 64, 70, 230, 1219, 1352, 1388
BssNI GRCGYC 1 cut(s) 344
BssSI CACGAG 1 cut(s) 35
Bst2BI CACGAG 1 cut(s) 35
Bst2UI CCWGG 4 cut(s) 215, 636, 997, 1152
Bst6I CTCTTC 1 cut(s) 608
BstACI GRCGYC 1 cut(s) 344
BstAPI GCANNNNNTGC 1 cut(s) 1442
BstBAI YACGTR 1 cut(s) 1457
BstC8I GCNNGC 4 cut(s) 396, 579, 666, 795
BstDEI CTNAG 6 cut(s) 516, 531, 840, 1308, 1395, 1423
BstF5I GGATG 3 cut(s) 568, 919, 1093
BstFNI CGCG 5 cut(s) 24, 63, 323, 398, 793
BstH2I RGCGCY 1 cut(s) 984
BstHHI GCGC 2 cut(s) 323, 983
BstKTI GATC 8 cut(s) 28, 61, 67, 73, 233, 1222, 1355, 1391
BstMAI GTCTC 4 cut(s) 113, 259, 351, 407
BstMBI GATC 8 cut(s) 25, 58, 64, 70, 230, 1219, 1352, 1388
BstMCI CGRYCG 3 cut(s) 28, 263, 1355
BstMWI GCNNNNNNNGC 7 cut(s) 30, 670, 799, 853, 978, 1313, 1442
BstNI CCWGG 4 cut(s) 215, 636, 997, 1152
BstNSI RCATGY 1 cut(s) 1518
BstSCI CCNGG 5 cut(s) 213, 373, 634, 995, 1150
BstSFI CTRYAG 1 cut(s) 1292
BstSLI GKGCMC 1 cut(s) 1003
BstUI CGCG 5 cut(s) 24, 63, 323, 398, 793
BstV1I GCAGC 8 cut(s) 16, 463, 697, 715, 792, 865, 1198, 1325
BstV2I GAAGAC 1 cut(s) 852
BstX2I RGATCY 3 cut(s) 70, 230, 1219
BstYI RGATCY 3 cut(s) 70, 230, 1219
BstZI CGGCCG 1 cut(s) 260
BsuRI GGCC 7 cut(s) 17, 262, 577, 604, 631, 897, 1150
BtgZI GCGATG 1 cut(s) 494
BtrI CACGTC 1 cut(s) 1233
BtsCI GGATG 3 cut(s) 568, 919, 1093
BtsI GCAGTG 1 cut(s) 1275
BtsIMutI CAGTG 2 cut(s) 1275, 1507
BtuMI TCGCGA 1 cut(s) 63
BveI ACCTGC 2 cut(s) 1084, 1299
Cac8I GCNNGC 4 cut(s) 396, 579, 666, 795
CciI TCATGA 1 cut(s) 1374
CfoI GCGC 2 cut(s) 323, 983
Cfr10I RCCGGY 4 cut(s) 219, 258, 390, 664
CseI GACGC 2 cut(s) 333, 799
Csp6I GTAC 1 cut(s) 658
CviAII CATG 7 cut(s) 706, 804, 830, 955, 1375, 1414, 1515
CviQI GTAC 1 cut(s) 658
DdeI CTNAG 6 cut(s) 516, 531, 840, 1308, 1395, 1423
DpnI GATC 8 cut(s) 27, 60, 66, 72, 232, 1221, 1354, 1390
DpnII GATC 8 cut(s) 25, 58, 64, 70, 230, 1219, 1352, 1388
DrdI GACNNNNNNGTC 2 cut(s) 511, 1123
DriI GACNNNNNGTC 1 cut(s) 223
DseDI GACNNNNNNGTC 2 cut(s) 511, 1123
EaeI YGGCCR 1 cut(s) 260
EagI CGGCCG 1 cut(s) 260
Eam1104I CTCTTC 1 cut(s) 608
Eam1105I GACNNNNNGTC 1 cut(s) 223
EarI CTCTTC 1 cut(s) 608
EciI GGCGGA 1 cut(s) 166
Ecl136II GAGCTC 1 cut(s) 426
EclXI CGGCCG 1 cut(s) 260
Eco147I AGGCCT 1 cut(s) 1150
Eco24I GRGCYC 2 cut(s) 428, 974
Eco31I GGTCTC 1 cut(s) 259
Eco47I GGWCC 7 cut(s) 53, 217, 225, 620, 687, 1125, 1449
Eco47III AGCGCT 1 cut(s) 982
Eco52I CGGCCG 1 cut(s) 260
Eco53kI GAGCTC 1 cut(s) 426
Eco57I CTGAAG 1 cut(s) 255
Eco88I CYCGRG 3 cut(s) 46, 626, 933
EcoICRI GAGCTC 1 cut(s) 426
EcoO109I RGGNCCY 1 cut(s) 1449
EcoRII CCWGG 4 cut(s) 213, 634, 995, 1150
EcoT22I ATGCAT 1 cut(s) 809
EcoT38I GRGCYC 2 cut(s) 428, 974
Esp3I CGTCTC 2 cut(s) 113, 351
FaeI CATG 7 cut(s) 709, 807, 833, 958, 1378, 1417, 1518
FaqI GGGAC 4 cut(s) 357, 422, 700, 965
FatI CATG 7 cut(s) 705, 803, 829, 954, 1374, 1413, 1514
FauI CCCGC 1 cut(s) 277
FauNDI CATATG 1 cut(s) 1488
FokI GGATG 3 cut(s) 575, 926, 1100
FriOI GRGCYC 2 cut(s) 428, 974
GlaI GCGC 2 cut(s) 322, 982
GsuI CTGGAG 2 cut(s) 869, 1349
HaeII RGCGCY 1 cut(s) 984
HaeIII GGCC 7 cut(s) 17, 262, 577, 604, 631, 897, 1150
HapII CCGG 9 cut(s) 68, 114, 220, 259, 375, 391, 551, 665, 765
HgaI GACGC 2 cut(s) 333, 799
HhaI GCGC 2 cut(s) 323, 983
Hin1I GRCGYC 1 cut(s) 344
Hin1II CATG 7 cut(s) 709, 807, 833, 958, 1378, 1417, 1518
Hin6I GCGC 2 cut(s) 321, 981
HinP1I GCGC 2 cut(s) 321, 981
HincII GTYRAC 1 cut(s) 1429
HindII GTYRAC 1 cut(s) 1429
HindIII AAGCTT 3 cut(s) 237, 1337, 1461
HinfI GANTC 8 cut(s) 81, 149, 155, 173, 400, 435, 547, 872
HpaII CCGG 9 cut(s) 68, 114, 220, 259, 375, 391, 551, 665, 765
HphI GGTGA 2 cut(s) 583, 1184
Hpy166II GTNNAC 1 cut(s) 1429
Hpy188III TCNNGA 9 cut(s) 56, 62, 68, 114, 228, 878, 945, 1375, 1409
Hpy8I GTNNAC 1 cut(s) 1429
Hpy99I CGWCG 4 cut(s) 108, 445, 475, 793
HpyAV CCTTC 5 cut(s) 199, 325, 409, 942, 1150
HpyCH4IV ACGT 3 cut(s) 1200, 1232, 1456
HpyCH4V TGCA 7 cut(s) 4, 807, 1054, 1093, 1196, 1294, 1445
HpyF10VI GCNNNNNNNGC 7 cut(s) 30, 670, 799, 853, 978, 1313, 1442
HpyF3I CTNAG 6 cut(s) 516, 531, 840, 1308, 1395, 1423
HpySE526I ACGT 3 cut(s) 1200, 1232, 1456
Hsp92I GRCGYC 1 cut(s) 344
Hsp92II CATG 7 cut(s) 709, 807, 833, 958, 1378, 1417, 1518
HspAI GCGC 2 cut(s) 321, 981
Kpn2I TCCGGA 2 cut(s) 67, 113
KroI GCCGGC 1 cut(s) 664
KroNI GCCGGC 1 cut(s) 666
Kzo9I GATC 8 cut(s) 25, 58, 64, 70, 230, 1219, 1352, 1388
LmnI GCTCC 4 cut(s) 191, 423, 430, 850
Lsp1109I GCAGC 8 cut(s) 16, 463, 697, 715, 792, 865, 1198, 1325
LweI GCATC 3 cut(s) 517, 904, 1183
MaeII ACGT 3 cut(s) 1200, 1232, 1456
MaeIII GTNAC 3 cut(s) 359, 386, 1108
MalI GATC 8 cut(s) 27, 60, 66, 72, 232, 1221, 1354, 1390
MbiI CCGCTC 1 cut(s) 625
MboI GATC 8 cut(s) 25, 58, 64, 70, 230, 1219, 1352, 1388
MboII GAAGA 7 cut(s) 259, 475, 536, 625, 852, 1059, 1411
MflI RGATCY 3 cut(s) 70, 230, 1219
MhlI GDGCHC 3 cut(s) 428, 974, 1003
MluCI AATT 1 cut(s) 700
MlyI GAGTC 6 cut(s) 143, 149, 409, 444, 556, 866
MmeI TCCRAC 6 cut(s) 177, 258, 401, 440, 1056, 1160
Mph1103I ATGCAT 1 cut(s) 809
MroI TCCGGA 2 cut(s) 67, 113
MroNI GCCGGC 1 cut(s) 664
MseI TTAA 2 cut(s) 492, 1254
MslI CAYNNNNRTG 1 cut(s) 450
MspA1I CMGCKG 1 cut(s) 743
MspI CCGG 9 cut(s) 68, 114, 220, 259, 375, 391, 551, 665, 765
MspR9I CCNGG 5 cut(s) 215, 375, 636, 997, 1152
Mva1269I GAATGC 1 cut(s) 215
MvaI CCWGG 4 cut(s) 215, 636, 997, 1152
MvnI CGCG 5 cut(s) 24, 63, 323, 398, 793
MwoI GCNNNNNNNGC 7 cut(s) 30, 670, 799, 853, 978, 1313, 1442
NaeI GCCGGC 1 cut(s) 666
NciI CCSGG 1 cut(s) 375
NdeI CATATG 1 cut(s) 1488
NdeII GATC 8 cut(s) 25, 58, 64, 70, 230, 1219, 1352, 1388
NgoMIV GCCGGC 1 cut(s) 664
NlaIII CATG 7 cut(s) 709, 807, 833, 958, 1378, 1417, 1518
NlaIV GGNNCC 5 cut(s) 18, 72, 688, 758, 769
NmeAIII GCCGAG 2 cut(s) 288, 336
NmuCI GTSAC 1 cut(s) 1108
NruI TCGCGA 1 cut(s) 63
NsiI ATGCAT 1 cut(s) 809
NspI RCATGY 1 cut(s) 1518
PaeR7I CTCGAG 1 cut(s) 46
PagI TCATGA 1 cut(s) 1374
PasI CCCWGGG 1 cut(s) 996
PceI AGGCCT 1 cut(s) 1150
PcsI WCGNNNNNNNCGW 1 cut(s) 476
PctI GAATGC 1 cut(s) 215
PdiI GCCGGC 1 cut(s) 666
PfeI GAWTC 2 cut(s) 81, 173
Ple19I CGATCG 2 cut(s) 28, 1355
PleI GAGTC 6 cut(s) 143, 149, 408, 443, 555, 866
PpsI GAGTC 6 cut(s) 143, 149, 408, 443, 555, 866
Ppu21I YACGTR 1 cut(s) 1457
PpuMI RGGWCCY 1 cut(s) 1449
Psp124BI GAGCTC 1 cut(s) 428
Psp5II RGGWCCY 1 cut(s) 1449
Psp6I CCWGG 4 cut(s) 213, 634, 995, 1150
PspGI CCWGG 4 cut(s) 213, 634, 995, 1150
PspN4I GGNNCC 5 cut(s) 18, 72, 688, 758, 769
PspPPI RGGWCCY 1 cut(s) 1449
PspXI VCTCGAGB 1 cut(s) 46
PstI CTGCAG 1 cut(s) 1296
PsuI RGATCY 3 cut(s) 70, 230, 1219
PvuI CGATCG 2 cut(s) 28, 1355
PvuII CAGCTG 1 cut(s) 743
RgaI GCGATCGC 1 cut(s) 28
RruI TCGCGA 1 cut(s) 63
RsaI GTAC 1 cut(s) 659
RsaNI GTAC 1 cut(s) 658
RseI CAYNNNNRTG 1 cut(s) 450
SacI GAGCTC 1 cut(s) 428
SaqAI TTAA 2 cut(s) 492, 1254
Sau3AI GATC 8 cut(s) 25, 58, 64, 70, 230, 1219, 1352, 1388
SchI GAGTC 6 cut(s) 143, 149, 409, 444, 556, 866
ScrFI CCNGG 5 cut(s) 215, 375, 636, 997, 1152
SduI GDGCHC 3 cut(s) 428, 974, 1003
SfaAI GCGATCGC 1 cut(s) 28
SfaNI GCATC 3 cut(s) 517, 904, 1183
SfcI CTRYAG 1 cut(s) 1292
Sfr274I CTCGAG 1 cut(s) 46
SgfI GCGATCGC 1 cut(s) 28
SinI GGWCC 7 cut(s) 53, 217, 225, 620, 687, 1125, 1449
SlaI CTCGAG 1 cut(s) 46
SmiMI CAYNNNNRTG 1 cut(s) 450
SmlI CTYRAG 3 cut(s) 46, 876, 1407
SmoI CTYRAG 3 cut(s) 46, 876, 1407
Sse9I AATT 1 cut(s) 700
SseBI AGGCCT 1 cut(s) 1150
SsiI CCGC 8 cut(s) 31, 177, 223, 270, 601, 623, 917, 1061
SstI GAGCTC 1 cut(s) 428
StuI AGGCCT 1 cut(s) 1150
StyD4I CCNGG 5 cut(s) 213, 373, 634, 995, 1150
TaiI ACGT 3 cut(s) 1203, 1235, 1459
TaqI TCGA 4 cut(s) 47, 171, 245, 611
TasI AATT 1 cut(s) 700
TatI WGTACW 1 cut(s) 657
TauI GCSGC 4 cut(s) 33, 604, 920, 1064
TfiI GAWTC 2 cut(s) 81, 173
Tru1I TTAA 2 cut(s) 492, 1254
Tru9I TTAA 2 cut(s) 492, 1254
TscAI CASTG 2 cut(s) 1282, 1507
TseFI GTSAC 1 cut(s) 1108
TseI GCWGC 8 cut(s) 4, 476, 710, 728, 780, 853, 1211, 1313
Tsp45I GTSAC 1 cut(s) 1108
TspDTI ATGAA 7 cut(s) 694, 818, 852, 897, 1116, 1349, 1391
TspGWI ACGGA 2 cut(s) 708, 1336
TspRI CASTG 2 cut(s) 1282, 1507
VpaK11BI GGWCC 7 cut(s) 53, 217, 225, 620, 687, 1125, 1449
XceI RCATGY 1 cut(s) 1518
XhoI CTCGAG 1 cut(s) 46
Zsp2I ATGCAT 1 cut(s) 809
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.