Rh1CG259500

Remorin, C-terminal region

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
Physical Location & Seq
Reverse (-)
52386308 .. 52387575
1268 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG259500.1

Sequence Viewer

Length: 1080 bp
ATGTCAGAGCAGCGATCCGGGTTAAGAATCCGAGACGCTAGCCCGGACTCGGTTATTGTAAACTCGAGTCCAGCCTCTTCTCCTCTTCCGCTTCCGCCAGCGTTGACCGCTGCTCCTTCGCCTCCGAAGCCTTTGACCACGACTCCACCGCCTCCGAGATCTCTCCGAACTCGGCGGCGCACCGTCACCAGGTTGAAGAGAGCTCCAGTGGTCCGGATCGCGATCCAGATCCGAAGACGAGCCCCGCTTTACACATCACCAGCCACCTCCACGGTCGTCGATCCAGAAAAGGAGAAAAGGCCAAAGGTACTACAGCTAAGCTTCGGGACGACTTTTTCCAAACGATGTGACTTTCTATTTTCCCTGACTTTCACTCTTTGGCTTGGAGCTTGCACAGTTCCAAAGCAAGACAGCGACGCCGACTTGGTTCTTGATTCAGCACGAAGCTCTTTCTCTCTCGCCTTGAAAGAATGCCAGGACCGTCGATCTAGATCTGAAGCTCTGTCCAAGAAGCTAGACAGGCCGAGACCCGCTTCTTTGGATTTGAACAATGTCACCGCCTCGTCTCCGAGATTGGGGACCTTAAAGAAGAGCTCAACGGCGTCTCGCAAGTCTGGAACCTTCCCAAGTCCCGGAACACCTACCTACCGGCATACTAGTCTTGGAGTGCAGAAGGGTTGGAGCTCGGAGCGAGTTCCGGCCAATGCTAATTTGGGGGGGCAGGAAGAATACAACTGCTGCTGCTATGTTGCCATTCAACAATGGGAGGACGTTGCCGTCGAAATGGGAAGATGCAGAGAGGTGGATTTTCAGTCCGGTTCAGGGGGATGGTGTGACGAGGCAGTCGAACAGCAATTATATCGAATTGCGCTGCGCTCCGGTGCTTGCCAGATAGTGGGCTACCCACTTCCCTTCAAAGCTTGGAGATTGTGCATTGCCCTGCTCTGCAGTGCTTGCCAGATAGTGGACTACCCTCTTCTCTTTCTCATCTACGTATCAGTGATTGCCCTTTGCTTCAGGAACGGTGCCAAAGAGAGACGGGTGAAGATTGGCCCAAGATTGCTCACATCAAGCACATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

359

Amino Acids

39.53

Weight (kDa)

9.85

Isoelectric Point (pI)

71.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 776, 842
AccB1I GGYRCC 1 cut(s) 1025
AccB7I CCANNNNNTGG 2 cut(s) 895, 964
AccII CGCG 1 cut(s) 221
AccIII TCCGGA 1 cut(s) 213
AciI CCGC 8 cut(s) 89, 95, 108, 149, 175, 245, 531, 558
AclWI GGATC 5 cut(s) 9, 217, 223, 224, 275
AcoI YGGCCR 1 cut(s) 699
AcuI CTGAAG 2 cut(s) 516, 1000
AcyI GRCGYC 2 cut(s) 417, 602
AfaI GTAC 1 cut(s) 309
AfiI CCNNNNNNNGG 7 cut(s) 49, 189, 575, 632, 822, 895, 964
AgsI TTSAA 5 cut(s) 196, 466, 547, 758, 916
AhlI ACTAGT 1 cut(s) 656
AjnI CCWGG 2 cut(s) 188, 474
Alw21I GWGCWC 3 cut(s) 205, 596, 686
Alw26I GTCTC 5 cut(s) 27, 520, 570, 609, 1030
AlwI GGATC 5 cut(s) 9, 217, 223, 224, 275
Ama87I CYCGRG 1 cut(s) 64
Aor13HI TCCGGA 1 cut(s) 213
AoxI GGCC 4 cut(s) 299, 521, 699, 1051
ApeKI GCWGC 5 cut(s) 10, 110, 738, 741, 871
AspLEI GCGC 3 cut(s) 180, 871, 876
AspS9I GGNCC 4 cut(s) 211, 478, 579, 1052
AsuC2I CCSGG 3 cut(s) 19, 44, 633
AsuHPI GGTGA 4 cut(s) 178, 249, 547, 1054
AsuNHI GCTAGC 1 cut(s) 38
AvaI CYCGRG 1 cut(s) 64
AvaII GGWCC 3 cut(s) 211, 478, 579
BanI GGYRCC 1 cut(s) 1025
BanII GRGCYC 4 cut(s) 205, 244, 596, 686
BbsI GAAGAC 1 cut(s) 241
Bbv12I GWGCWC 3 cut(s) 205, 596, 686
BbvI GCAGC 5 cut(s) 22, 97, 725, 728, 858
BccI CCATC 1 cut(s) 822
BceAI ACGGC 2 cut(s) 615, 761
BcgI CGANNNNNNTGC 2 cut(s) 842, 876
BciT130I CCWGG 2 cut(s) 190, 476
BcnI CCSGG 3 cut(s) 19, 44, 633
BcoDI GTCTC 5 cut(s) 27, 520, 570, 609, 1030
BcuI ACTAGT 1 cut(s) 656
BfaI CTAG 4 cut(s) 39, 489, 515, 657
BfmI CTRYAG 2 cut(s) 311, 946
BglII AGATCT 2 cut(s) 158, 491
BisI GCNGC 6 cut(s) 11, 111, 176, 739, 742, 872
BlpI GCTNAGC 1 cut(s) 317
BlsI GCNGC 6 cut(s) 12, 112, 177, 740, 743, 873
Bme1390I CCNGG 5 cut(s) 19, 44, 190, 476, 633
Bme18I GGWCC 3 cut(s) 211, 478, 579
BmeT110I CYCGRG 1 cut(s) 64
BmgT120I GGNCC 4 cut(s) 211, 478, 579, 1052
BmiI GGNNCC 3 cut(s) 580, 619, 1027
BmrFI CCNGG 5 cut(s) 19, 44, 190, 476, 633
BmsI GCATC 1 cut(s) 782
BmtI GCTAGC 1 cut(s) 42
BpiI GAAGAC 1 cut(s) 241
BpmI CTGGAG 1 cut(s) 189
Bpu1102I GCTNAGC 1 cut(s) 317
BpuMI CCSGG 3 cut(s) 19, 44, 633
BsaAI YACGTR 1 cut(s) 994
BsaBI GATNNNNATC 3 cut(s) 221, 227, 490
BsaHI GRCGYC 2 cut(s) 417, 602
BsaI GGTCTC 1 cut(s) 520
BsaJI CCNNGG 1 cut(s) 270
BsaWI WCCGGW 3 cut(s) 213, 815, 878
BsaXI ACNNNNNCTCC 4 cut(s) 97, 127, 127, 157
Bsc4I CCNNNNNNNGG 7 cut(s) 49, 189, 575, 632, 822, 895, 964
Bse118I RCCGGY 1 cut(s) 648
Bse1I ACTGG 1 cut(s) 206
Bse3DI GCAATG 1 cut(s) 933
Bse8I GATNNNNATC 3 cut(s) 221, 227, 490
BseAI TCCGGA 1 cut(s) 213
BseBI CCWGG 2 cut(s) 190, 476
BseDI CCNNGG 1 cut(s) 270
BseGI GGATG 1 cut(s) 833
BseJI GATNNNNATC 3 cut(s) 221, 227, 490
BseLI CCNNNNNNNGG 7 cut(s) 49, 189, 575, 632, 822, 895, 964
BseMI GCAATG 1 cut(s) 933
BseNI ACTGG 1 cut(s) 206
BseRI GAGGAG 1 cut(s) 72
BseXI GCAGC 5 cut(s) 22, 97, 725, 728, 858
BsgI GTGCAG 1 cut(s) 689
Bsh1236I CGCG 1 cut(s) 221
Bsh1285I CGRYCG 1 cut(s) 276
BshFI GGCC 4 cut(s) 301, 523, 701, 1053
BshNI GGYRCC 1 cut(s) 1025
BsiEI CGRYCG 1 cut(s) 276
BsiHKAI GWGCWC 3 cut(s) 205, 596, 686
BsiHKCI CYCGRG 1 cut(s) 64
BsiSI CCGG 8 cut(s) 18, 44, 214, 633, 649, 698, 816, 879
BslFI GGGAC 3 cut(s) 340, 592, 615
BslI CCNNNNNNNGG 7 cut(s) 49, 189, 575, 632, 822, 895, 964
BsmAI GTCTC 5 cut(s) 27, 520, 570, 609, 1030
BsmBI CGTCTC 4 cut(s) 27, 570, 609, 1030
BsmFI GGGAC 3 cut(s) 340, 592, 615
BsmI GAATGC 1 cut(s) 476
BsnI GGCC 4 cut(s) 301, 523, 701, 1053
Bso31I GGTCTC 1 cut(s) 520
BsoBI CYCGRG 1 cut(s) 64
Bsp1286I GDGCHC 4 cut(s) 205, 244, 596, 686
Bsp13I TCCGGA 1 cut(s) 213
Bsp143I GATC 8 cut(s) 14, 158, 216, 222, 228, 280, 485, 491
Bsp1720I GCTNAGC 1 cut(s) 317
Bsp68I TCGCGA 1 cut(s) 221
BspACI CCGC 8 cut(s) 89, 95, 108, 149, 175, 245, 531, 558
BspANI GGCC 4 cut(s) 301, 523, 701, 1053
BspEI TCCGGA 1 cut(s) 213
BspFNI CGCG 1 cut(s) 221
BspLI GGNNCC 3 cut(s) 580, 619, 1027
BspMAI CTGCAG 1 cut(s) 950
BspOI GCTAGC 1 cut(s) 42
BspPI GGATC 5 cut(s) 9, 217, 223, 224, 275
BspQI GCTCTTC 1 cut(s) 584
BspT107I GGYRCC 1 cut(s) 1025
BspTNI GGTCTC 1 cut(s) 520
BsrDI GCAATG 1 cut(s) 933
BsrFI RCCGGY 1 cut(s) 648
BsrI ACTGG 1 cut(s) 206
BssAI RCCGGY 1 cut(s) 648
BssECI CCNNGG 1 cut(s) 270
BssMI GATC 8 cut(s) 14, 158, 216, 222, 228, 280, 485, 491
BssNI GRCGYC 2 cut(s) 417, 602
Bst2UI CCWGG 2 cut(s) 190, 476
Bst4CI ACNGT 5 cut(s) 184, 274, 397, 482, 1025
Bst6I CTCTTC 5 cut(s) 82, 90, 191, 584, 981
BstACI GRCGYC 2 cut(s) 417, 602
BstAPI GCANNNNNTGC 1 cut(s) 954
BstBAI YACGTR 1 cut(s) 994
BstC8I GCNNGC 5 cut(s) 40, 99, 391, 886, 955
BstDEI CTNAG 1 cut(s) 317
BstDSI CCRYGG 1 cut(s) 270
BstF5I GGATG 1 cut(s) 833
BstFNI CGCG 1 cut(s) 221
BstHHI GCGC 3 cut(s) 180, 871, 876
BstKTI GATC 8 cut(s) 17, 161, 219, 225, 231, 283, 488, 494
BstMAI GTCTC 5 cut(s) 27, 520, 570, 609, 1030
BstMBI GATC 8 cut(s) 14, 158, 216, 222, 228, 280, 485, 491
BstMCI CGRYCG 1 cut(s) 276
BstMWI GCNNNNNNNGC 4 cut(s) 107, 127, 520, 954
BstNI CCWGG 2 cut(s) 190, 476
BstSCI CCNGG 5 cut(s) 17, 42, 188, 474, 631
BstSFI CTRYAG 2 cut(s) 311, 946
BstSNI TACGTA 1 cut(s) 994
BstUI CGCG 1 cut(s) 221
BstV1I GCAGC 5 cut(s) 22, 97, 725, 728, 858
BstV2I GAAGAC 1 cut(s) 241
BstX2I RGATCY 3 cut(s) 158, 228, 491
BstYI RGATCY 3 cut(s) 158, 228, 491
BsuRI GGCC 4 cut(s) 301, 523, 701, 1053
BtgI CCRYGG 1 cut(s) 270
BtsCI GGATG 1 cut(s) 833
BtsI GCAGTG 1 cut(s) 955
BtsIMutI CAGTG 3 cut(s) 213, 955, 1005
BtuMI TCGCGA 1 cut(s) 221
Cac8I GCNNGC 5 cut(s) 40, 99, 391, 886, 955
CfoI GCGC 3 cut(s) 180, 871, 876
Cfr10I RCCGGY 1 cut(s) 648
Cfr13I GGNCC 4 cut(s) 211, 478, 579, 1052
CseI GACGC 3 cut(s) 44, 425, 591
CsiI ACCWGGT 1 cut(s) 188
Csp6I GTAC 1 cut(s) 308
CviQI GTAC 1 cut(s) 308
DdeI CTNAG 1 cut(s) 317
DpnI GATC 8 cut(s) 16, 160, 218, 224, 230, 282, 487, 493
DpnII GATC 8 cut(s) 14, 158, 216, 222, 228, 280, 485, 491
DrdI GACNNNNNNGTC 2 cut(s) 776, 842
DseDI GACNNNNNNGTC 2 cut(s) 776, 842
EaeI YGGCCR 1 cut(s) 699
Eam1104I CTCTTC 5 cut(s) 82, 90, 191, 584, 981
EarI CTCTTC 5 cut(s) 82, 90, 191, 584, 981
EciI GGCGGA 1 cut(s) 84
Ecl136II GAGCTC 3 cut(s) 203, 594, 684
Eco105I TACGTA 1 cut(s) 994
Eco24I GRGCYC 4 cut(s) 205, 244, 596, 686
Eco31I GGTCTC 1 cut(s) 520
Eco47I GGWCC 3 cut(s) 211, 478, 579
Eco53kI GAGCTC 3 cut(s) 203, 594, 684
Eco57I CTGAAG 2 cut(s) 516, 1000
Eco88I CYCGRG 1 cut(s) 64
EcoICRI GAGCTC 3 cut(s) 203, 594, 684
EcoO109I RGGNCCY 1 cut(s) 579
EcoRII CCWGG 2 cut(s) 188, 474
EcoT38I GRGCYC 4 cut(s) 205, 244, 596, 686
Esp3I CGTCTC 4 cut(s) 27, 570, 609, 1030
FaiI YATR 4 cut(s) 654, 747, 859, 1078
FaqI GGGAC 3 cut(s) 340, 592, 615
FauI CCCGC 2 cut(s) 252, 538
Fnu4HI GCNGC 6 cut(s) 11, 111, 176, 739, 742, 872
FokI GGATG 1 cut(s) 840
FriOI GRGCYC 4 cut(s) 205, 244, 596, 686
Fsp4HI GCNGC 6 cut(s) 11, 111, 176, 739, 742, 872
FspBI CTAG 4 cut(s) 39, 489, 515, 657
GlaI GCGC 3 cut(s) 179, 870, 875
GluI GCNGC 6 cut(s) 11, 111, 176, 739, 742, 872
GsuI CTGGAG 1 cut(s) 189
HaeIII GGCC 4 cut(s) 301, 523, 701, 1053
HapII CCGG 8 cut(s) 18, 44, 214, 633, 649, 698, 816, 879
HgaI GACGC 3 cut(s) 44, 425, 591
HhaI GCGC 3 cut(s) 180, 871, 876
Hin1I GRCGYC 2 cut(s) 417, 602
Hin6I GCGC 3 cut(s) 178, 869, 874
HinP1I GCGC 3 cut(s) 178, 869, 874
HincII GTYRAC 1 cut(s) 105
HindII GTYRAC 1 cut(s) 105
HindIII AAGCTT 2 cut(s) 319, 918
HinfI GANTC 5 cut(s) 27, 47, 67, 142, 434
HpaII CCGG 8 cut(s) 18, 44, 214, 633, 649, 698, 816, 879
HphI GGTGA 4 cut(s) 178, 249, 547, 1054
Hpy166II GTNNAC 3 cut(s) 61, 105, 967
Hpy188I TCNGA 9 cut(s) 7, 32, 126, 156, 167, 233, 496, 570, 688
Hpy188III TCNNGA 9 cut(s) 214, 220, 226, 284, 325, 431, 489, 615, 1018
Hpy8I GTNNAC 3 cut(s) 61, 105, 967
Hpy99I CGWCG 4 cut(s) 281, 419, 486, 782
HpyAV CCTTC 4 cut(s) 126, 631, 667, 922
HpyCH4III ACNGT 5 cut(s) 184, 274, 397, 482, 1025
HpyCH4IV ACGT 2 cut(s) 771, 993
HpyCH4V TGCA 5 cut(s) 393, 670, 795, 933, 948
HpyF10VI GCNNNNNNNGC 4 cut(s) 107, 127, 520, 954
HpyF3I CTNAG 1 cut(s) 317
HpySE526I ACGT 2 cut(s) 771, 993
Hsp92I GRCGYC 2 cut(s) 417, 602
HspAI GCGC 3 cut(s) 178, 869, 874
Kpn2I TCCGGA 1 cut(s) 213
Kzo9I GATC 8 cut(s) 14, 158, 216, 222, 228, 280, 485, 491
LguI GCTCTTC 1 cut(s) 584
LmnI GCTCC 6 cut(s) 118, 208, 386, 681, 688, 881
Lsp1109I GCAGC 5 cut(s) 22, 97, 725, 728, 858
LweI GCATC 1 cut(s) 782
MabI ACCWGGT 1 cut(s) 188
MaeI CTAG 4 cut(s) 39, 489, 515, 657
MaeII ACGT 2 cut(s) 771, 993
MaeIII GTNAC 4 cut(s) 184, 347, 553, 833
MalI GATC 8 cut(s) 16, 160, 218, 224, 230, 282, 487, 493
MboI GATC 8 cut(s) 14, 158, 216, 222, 228, 280, 485, 491
MboII GAAGA 9 cut(s) 69, 77, 208, 246, 601, 737, 801, 968, 1057
MflI RGATCY 3 cut(s) 158, 228, 491
MhlI GDGCHC 4 cut(s) 205, 244, 596, 686
MluCI AATT 3 cut(s) 709, 854, 864
MlyI GAGTC 3 cut(s) 41, 76, 136
MmeI TCCRAC 1 cut(s) 659
MroI TCCGGA 1 cut(s) 213
MseI TTAA 2 cut(s) 23, 584
MspA1I CMGCKG 1 cut(s) 110
MspI CCGG 8 cut(s) 18, 44, 214, 633, 649, 698, 816, 879
MspR9I CCNGG 5 cut(s) 19, 44, 190, 476, 633
MteI GCGCNGCGC 1 cut(s) 872
Mva1269I GAATGC 1 cut(s) 476
MvaI CCWGG 2 cut(s) 190, 476
MvnI CGCG 1 cut(s) 221
MwoI GCNNNNNNNGC 4 cut(s) 107, 127, 520, 954
NciI CCSGG 3 cut(s) 19, 44, 633
NdeII GATC 8 cut(s) 14, 158, 216, 222, 228, 280, 485, 491
NheI GCTAGC 1 cut(s) 38
NlaIV GGNNCC 3 cut(s) 580, 619, 1027
NmeAIII GCCGAG 2 cut(s) 151, 549
NmuCI GTSAC 4 cut(s) 184, 347, 553, 833
NruI TCGCGA 1 cut(s) 221
PaeR7I CTCGAG 1 cut(s) 64
PciSI GCTCTTC 1 cut(s) 584
PcsI WCGNNNNNNNCGW 2 cut(s) 777, 843
PctI GAATGC 1 cut(s) 476
PfeI GAWTC 2 cut(s) 27, 434
PflMI CCANNNNNTGG 2 cut(s) 895, 964
PfoI TCCNGGA 1 cut(s) 631
PkrI GCNGC 6 cut(s) 12, 112, 177, 740, 743, 873
PleI GAGTC 3 cut(s) 41, 75, 136
PpsI GAGTC 3 cut(s) 41, 75, 136
Ppu21I YACGTR 1 cut(s) 994
PpuMI RGGWCCY 1 cut(s) 579
Psp124BI GAGCTC 3 cut(s) 205, 596, 686
Psp5II RGGWCCY 1 cut(s) 579
Psp6I CCWGG 2 cut(s) 188, 474
PspGI CCWGG 2 cut(s) 188, 474
PspN4I GGNNCC 3 cut(s) 580, 619, 1027
PspPI GGNCC 4 cut(s) 211, 478, 579, 1052
PspPPI RGGWCCY 1 cut(s) 579
PspXI VCTCGAGB 1 cut(s) 64
PstI CTGCAG 1 cut(s) 950
PsuI RGATCY 3 cut(s) 158, 228, 491
RruI TCGCGA 1 cut(s) 221
RsaI GTAC 1 cut(s) 309
RsaNI GTAC 1 cut(s) 308
SacI GAGCTC 3 cut(s) 205, 596, 686
SapI GCTCTTC 1 cut(s) 584
SaqAI TTAA 2 cut(s) 23, 584
SatI GCNGC 6 cut(s) 11, 111, 176, 739, 742, 872
Sau3AI GATC 8 cut(s) 14, 158, 216, 222, 228, 280, 485, 491
Sau96I GGNCC 4 cut(s) 211, 478, 579, 1052
SchI GAGTC 3 cut(s) 41, 76, 136
ScrFI CCNGG 5 cut(s) 19, 44, 190, 476, 633
SduI GDGCHC 4 cut(s) 205, 244, 596, 686
SexAI ACCWGGT 1 cut(s) 188
SfaNI GCATC 1 cut(s) 782
SfcI CTRYAG 2 cut(s) 311, 946
Sfr274I CTCGAG 1 cut(s) 64
SinI GGWCC 3 cut(s) 211, 478, 579
SlaI CTCGAG 1 cut(s) 64
SmlI CTYRAG 1 cut(s) 64
SmoI CTYRAG 1 cut(s) 64
SnaBI TACGTA 1 cut(s) 994
SpeI ACTAGT 1 cut(s) 656
Sse9I AATT 3 cut(s) 709, 854, 864
SsiI CCGC 8 cut(s) 89, 95, 108, 149, 175, 245, 531, 558
SspMI CTAG 4 cut(s) 39, 489, 515, 657
SstI GAGCTC 3 cut(s) 205, 596, 686
StyD4I CCNGG 5 cut(s) 17, 42, 188, 474, 631
TaaI ACNGT 5 cut(s) 184, 274, 397, 482, 1025
TaiI ACGT 2 cut(s) 774, 996
TaqI TCGA 6 cut(s) 65, 279, 484, 780, 846, 862
TasI AATT 3 cut(s) 709, 854, 864
TauI GCSGC 1 cut(s) 178
TfiI GAWTC 2 cut(s) 27, 434
Tru1I TTAA 2 cut(s) 23, 584
Tru9I TTAA 2 cut(s) 23, 584
TscAI CASTG 3 cut(s) 213, 955, 1005
TseFI GTSAC 4 cut(s) 184, 347, 553, 833
TseI GCWGC 5 cut(s) 10, 110, 738, 741, 871
Tsp45I GTSAC 4 cut(s) 184, 347, 553, 833
TspRI CASTG 3 cut(s) 213, 955, 1005
Van91I CCANNNNNTGG 2 cut(s) 895, 964
VpaK11BI GGWCC 3 cut(s) 211, 478, 579
XbaI TCTAGA 1 cut(s) 488
XcmI CCANNNNNNNNNTGG 1 cut(s) 709
XhoI CTCGAG 1 cut(s) 64
XspI CTAG 4 cut(s) 39, 489, 515, 657
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.