No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G31830 |
| malus_domestica | MD08G1056200.v1.1 MD15G1040800.v1.1 MD15G1144300.v1.1 |
| prunus_persica | Prupe.1G394000_v2.0.a1 Prupe.7G263500_v2.0.a1 |
| pyrus_communis | pycom02g00590 |
| rosa_chinensis | RchiOBHm_Chr6g0299391 |
| rosa_laevigata | RLG00000011436 RLG00000015702 |
| rosa_multiflora | Rmu_sc0013965.1_g000003 Rmu_sc0017526.1_g000003 Rmu_ssc0000347.1_g000006 |
| rosa_roxburghii | Rroxscaffold_7G00168730 |
| rosa_rugosa | Rorug01G0461500 Rorug06G0287900 |
| rosa_samantha | Rh2AG010400 Rh2BG011000 Rh2CG011900 Rh2DG012900 Rh6AG399400 Rh6BG408000 Rh6CG413800 Rh6DG400600 |
| rosa_wichuraiana | Rw2G000930 Rw6G034970 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 59 |
| AciI | CCGC | 2 cut(s) | 189, 214 |
| AfaI | GTAC | 1 cut(s) | 131 |
| AspLEI | GCGC | 1 cut(s) | 61 |
| AsuC2I | CCSGG | 1 cut(s) | 17 |
| AsuHPI | GGTGA | 5 cut(s) | 21, 100, 115, 172, 200 |
| BccI | CCATC | 3 cut(s) | 51, 119, 201 |
| BceAI | ACGGC | 1 cut(s) | 83 |
| BcnI | CCSGG | 1 cut(s) | 17 |
| BlpI | GCTNAGC | 1 cut(s) | 21 |
| Bme1390I | CCNGG | 1 cut(s) | 17 |
| BmiI | GGNNCC | 1 cut(s) | 187 |
| BmrFI | CCNGG | 1 cut(s) | 17 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 21 |
| BpuMI | CCSGG | 1 cut(s) | 17 |
| BsaJI | CCNNGG | 1 cut(s) | 15 |
| BsaWI | WCCGGW | 2 cut(s) | 31, 182 |
| BseDI | CCNNGG | 1 cut(s) | 15 |
| BseMII | CTCAG | 1 cut(s) | 35 |
| Bsh1236I | CGCG | 1 cut(s) | 59 |
| Bsh1285I | CGRYCG | 1 cut(s) | 87 |
| BsiEI | CGRYCG | 1 cut(s) | 87 |
| BsiSI | CCGG | 4 cut(s) | 17, 32, 146, 183 |
| BsmI | GAATGC | 1 cut(s) | 25 |
| Bsp1407I | TGTACA | 1 cut(s) | 129 |
| Bsp143I | GATC | 1 cut(s) | 84 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 21 |
| BspACI | CCGC | 2 cut(s) | 189, 214 |
| BspCNI | CTCAG | 1 cut(s) | 34 |
| BspFNI | CGCG | 1 cut(s) | 59 |
| BspLI | GGNNCC | 1 cut(s) | 187 |
| BsrGI | TGTACA | 1 cut(s) | 129 |
| BssECI | CCNNGG | 1 cut(s) | 15 |
| BssMI | GATC | 1 cut(s) | 84 |
| BstAUI | TGTACA | 1 cut(s) | 129 |
| BstDEI | CTNAG | 1 cut(s) | 21 |
| BstFNI | CGCG | 1 cut(s) | 59 |
| BstHHI | GCGC | 1 cut(s) | 61 |
| BstKTI | GATC | 1 cut(s) | 87 |
| BstMBI | GATC | 1 cut(s) | 84 |
| BstMCI | CGRYCG | 1 cut(s) | 87 |
| BstSCI | CCNGG | 1 cut(s) | 15 |
| BstUI | CGCG | 1 cut(s) | 59 |
| CfoI | GCGC | 1 cut(s) | 61 |
| Csp6I | GTAC | 1 cut(s) | 130 |
| CviJI | RGCY | 3 cut(s) | 20, 93, 145 |
| CviKI_1 | RGCY | 3 cut(s) | 20, 93, 145 |
| CviQI | GTAC | 1 cut(s) | 130 |
| DdeI | CTNAG | 1 cut(s) | 21 |
| DpnI | GATC | 1 cut(s) | 86 |
| DpnII | GATC | 1 cut(s) | 84 |
| GlaI | GCGC | 1 cut(s) | 60 |
| HapII | CCGG | 4 cut(s) | 17, 32, 146, 183 |
| HhaI | GCGC | 1 cut(s) | 61 |
| Hin6I | GCGC | 1 cut(s) | 59 |
| HinP1I | GCGC | 1 cut(s) | 59 |
| HpaII | CCGG | 4 cut(s) | 17, 32, 146, 183 |
| HphI | GGTGA | 5 cut(s) | 21, 100, 115, 172, 200 |
| Hpy188I | TCNGA | 2 cut(s) | 48, 89 |
| Hpy188III | TCNNGA | 1 cut(s) | 197 |
| HpyAV | CCTTC | 1 cut(s) | 73 |
| HpyCH4IV | ACGT | 1 cut(s) | 165 |
| HpyCH4V | TGCA | 1 cut(s) | 158 |
| HpyF3I | CTNAG | 1 cut(s) | 21 |
| HpySE526I | ACGT | 1 cut(s) | 165 |
| HspAI | GCGC | 1 cut(s) | 59 |
| Kzo9I | GATC | 1 cut(s) | 84 |
| LpnPI | CCDG | 4 cut(s) | 30, 45, 159, 196 |
| MaeII | ACGT | 1 cut(s) | 165 |
| MaeIII | GTNAC | 2 cut(s) | 106, 116 |
| MalI | GATC | 1 cut(s) | 86 |
| MboI | GATC | 1 cut(s) | 84 |
| MboII | GAAGA | 2 cut(s) | 64, 151 |
| MnlI | CCTC | 2 cut(s) | 83, 142 |
| MspI | CCGG | 4 cut(s) | 17, 32, 146, 183 |
| MspR9I | CCNGG | 1 cut(s) | 17 |
| Mva1269I | GAATGC | 1 cut(s) | 25 |
| MvnI | CGCG | 1 cut(s) | 59 |
| NciI | CCSGG | 1 cut(s) | 17 |
| NdeII | GATC | 1 cut(s) | 84 |
| NlaIV | GGNNCC | 1 cut(s) | 187 |
| NmuCI | GTSAC | 1 cut(s) | 106 |
| PctI | GAATGC | 1 cut(s) | 25 |
| Ple19I | CGATCG | 1 cut(s) | 87 |
| PspN4I | GGNNCC | 1 cut(s) | 187 |
| PvuI | CGATCG | 1 cut(s) | 87 |
| RsaI | GTAC | 1 cut(s) | 131 |
| RsaNI | GTAC | 1 cut(s) | 130 |
| Sau3AI | GATC | 1 cut(s) | 84 |
| ScrFI | CCNGG | 1 cut(s) | 17 |
| SetI | ASST | 2 cut(s) | 128, 168 |
| SsiI | CCGC | 2 cut(s) | 189, 214 |
| StyD4I | CCNGG | 1 cut(s) | 15 |
| TaiI | ACGT | 1 cut(s) | 168 |
| TatI | WGTACW | 1 cut(s) | 129 |
| TseFI | GTSAC | 1 cut(s) | 106 |
| Tsp45I | GTSAC | 1 cut(s) | 106 |
| TspDTI | ATGAA | 2 cut(s) | 17, 89 |