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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G31830 |
| malus_domestica | MD08G1056200.v1.1 MD15G1040800.v1.1 MD15G1144300.v1.1 |
| prunus_persica | Prupe.1G394000_v2.0.a1 Prupe.7G263500_v2.0.a1 |
| pyrus_communis | pycom02g00590 |
| rosa_chinensis | RchiOBHm_Chr6g0299391 |
| rosa_laevigata | RLG00000011436 RLG00000015702 |
| rosa_multiflora | Rmu_sc0013965.1_g000003 Rmu_sc0017526.1_g000003 Rmu_ssc0000347.1_g000006 |
| rosa_roxburghii | Rroxscaffold_7G00168730 |
| rosa_rugosa | Rorug01G0461500 Rorug06G0287900 |
| rosa_samantha | Rh2AG010400 Rh2BG011000 Rh2CG011900 Rh2DG012900 Rh6AG399400 Rh6BG408000 Rh6CG413800 Rh6DG400600 |
| rosa_wichuraiana | Rw2G000930 Rw6G034970 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 666 |
| AccB1I | GGYRCC | 1 cut(s) | 1574 |
| AccI | GTMKAC | 2 cut(s) | 1135, 1833 |
| AciI | CCGC | 1 cut(s) | 963 |
| AclWI | GGATC | 2 cut(s) | 721, 1575 |
| AcoI | YGGCCR | 2 cut(s) | 3, 1672 |
| AcsI | RAATTY | 6 cut(s) | 770, 889, 930, 978, 1070, 1363 |
| AcuI | CTGAAG | 1 cut(s) | 1710 |
| AfaI | GTAC | 2 cut(s) | 1201, 1403 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 786, 1116, 1547 |
| AflII | CTTAAG | 1 cut(s) | 514 |
| AgsI | TTSAA | 7 cut(s) | 58, 292, 1304, 1537, 1717, 1735, 1751 |
| AjnI | CCWGG | 3 cut(s) | 269, 946, 1496 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1203, 1235 |
| Alw26I | GTCTC | 3 cut(s) | 333, 579, 1272 |
| AlwI | GGATC | 2 cut(s) | 721, 1575 |
| AoxI | GGCC | 7 cut(s) | 3, 202, 281, 403, 550, 1277, 1672 |
| ApeKI | GCWGC | 3 cut(s) | 1328, 1426, 1460 |
| ApoI | RAATTY | 6 cut(s) | 770, 889, 930, 978, 1070, 1363 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1218 |
| AspS9I | GGNCC | 3 cut(s) | 437, 550, 777 |
| AsuHPI | GGTGA | 3 cut(s) | 158, 368, 1246 |
| AsuII | TTCGAA | 2 cut(s) | 216, 567 |
| AvaII | GGWCC | 2 cut(s) | 437, 777 |
| BalI | TGGCCA | 1 cut(s) | 1674 |
| BanI | GGYRCC | 1 cut(s) | 1574 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1156, 1188 |
| BauI | CACGAG | 1 cut(s) | 311 |
| BbvI | GCAGC | 3 cut(s) | 1315, 1413, 1447 |
| BccI | CCATC | 7 cut(s) | 373, 749, 950, 1314, 1365, 1565, 1787 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 206, 240 |
| BciT130I | CCWGG | 3 cut(s) | 271, 948, 1498 |
| BcoDI | GTCTC | 3 cut(s) | 333, 579, 1272 |
| BfaI | CTAG | 5 cut(s) | 174, 300, 687, 1593, 1695 |
| BfmI | CTRYAG | 1 cut(s) | 1024 |
| BfrI | CTTAAG | 1 cut(s) | 514 |
| BglII | AGATCT | 1 cut(s) | 444 |
| BisI | GCNGC | 3 cut(s) | 1329, 1427, 1461 |
| BlsI | GCNGC | 3 cut(s) | 1330, 1428, 1462 |
| Bme1390I | CCNGG | 3 cut(s) | 271, 948, 1498 |
| Bme18I | GGWCC | 2 cut(s) | 437, 777 |
| BmgT120I | GGNCC | 3 cut(s) | 437, 550, 777 |
| BmiI | GGNNCC | 4 cut(s) | 413, 439, 1208, 1576 |
| BmrFI | CCNGG | 3 cut(s) | 271, 948, 1498 |
| BmrI | ACTGGG | 1 cut(s) | 410 |
| BmsI | GCATC | 3 cut(s) | 460, 1234, 1692 |
| BmuI | ACTGGG | 1 cut(s) | 410 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 330, 362 |
| BpmI | CTGGAG | 2 cut(s) | 763, 1480 |
| Bpu10I | CCTNAGC | 1 cut(s) | 486 |
| Bpu14I | TTCGAA | 2 cut(s) | 216, 567 |
| BpuEI | CTTGAG | 3 cut(s) | 191, 897, 1467 |
| Bsa29I | ATCGAT | 1 cut(s) | 1057 |
| BsaI | GGTCTC | 1 cut(s) | 333 |
| BsaJI | CCNNGG | 2 cut(s) | 270, 946 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 786, 1116, 1547 |
| Bse118I | RCCGGY | 2 cut(s) | 5, 41 |
| Bse1I | ACTGG | 2 cut(s) | 126, 416 |
| Bse3DI | GCAATG | 2 cut(s) | 222, 1339 |
| BseBI | CCWGG | 3 cut(s) | 271, 948, 1498 |
| BseCI | ATCGAT | 1 cut(s) | 1057 |
| BseDI | CCNNGG | 2 cut(s) | 270, 946 |
| BseGI | GGATG | 6 cut(s) | 1007, 1325, 1479, 1576, 1707, 1810 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 786, 1116, 1547 |
| BseMI | GCAATG | 2 cut(s) | 222, 1339 |
| BseMII | CTCAG | 2 cut(s) | 1350, 1779 |
| BseNI | ACTGG | 2 cut(s) | 126, 416 |
| BseXI | GCAGC | 3 cut(s) | 1315, 1413, 1447 |
| BshFI | GGCC | 7 cut(s) | 5, 204, 283, 405, 552, 1279, 1674 |
| BshNI | GGYRCC | 1 cut(s) | 1574 |
| BshVI | ATCGAT | 1 cut(s) | 1057 |
| BsiSI | CCGG | 2 cut(s) | 6, 42 |
| BslFI | GGGAC | 2 cut(s) | 47, 1250 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 786, 1116, 1547 |
| BsmAI | GTCTC | 3 cut(s) | 333, 579, 1272 |
| BsmFI | GGGAC | 2 cut(s) | 47, 1250 |
| BsmI | GAATGC | 3 cut(s) | 306, 850, 1483 |
| BsnI | GGCC | 7 cut(s) | 5, 204, 283, 405, 552, 1279, 1674 |
| Bso31I | GGTCTC | 1 cut(s) | 333 |
| Bsp119I | TTCGAA | 2 cut(s) | 216, 567 |
| Bsp1407I | TGTACA | 1 cut(s) | 1199 |
| Bsp143I | GATC | 5 cut(s) | 444, 713, 1449, 1580, 1624 |
| BspACI | CCGC | 1 cut(s) | 963 |
| BspANI | GGCC | 7 cut(s) | 5, 204, 283, 405, 552, 1279, 1674 |
| BspCNI | CTCAG | 2 cut(s) | 1351, 1778 |
| BspDI | ATCGAT | 1 cut(s) | 1057 |
| BspHI | TCATGA | 2 cut(s) | 352, 925 |
| BspLI | GGNNCC | 4 cut(s) | 413, 439, 1208, 1576 |
| BspPI | GGATC | 2 cut(s) | 721, 1575 |
| BspT104I | TTCGAA | 2 cut(s) | 216, 567 |
| BspT107I | GGYRCC | 1 cut(s) | 1574 |
| BspTI | CTTAAG | 1 cut(s) | 514 |
| BspTNI | GGTCTC | 1 cut(s) | 333 |
| BsrDI | GCAATG | 2 cut(s) | 222, 1339 |
| BsrFI | RCCGGY | 2 cut(s) | 5, 41 |
| BsrGI | TGTACA | 1 cut(s) | 1199 |
| BsrI | ACTGG | 2 cut(s) | 126, 416 |
| BssAI | RCCGGY | 2 cut(s) | 5, 41 |
| BssECI | CCNNGG | 2 cut(s) | 270, 946 |
| BssMI | GATC | 5 cut(s) | 444, 713, 1449, 1580, 1624 |
| BssSI | CACGAG | 1 cut(s) | 311 |
| Bst2BI | CACGAG | 1 cut(s) | 311 |
| Bst2UI | CCWGG | 3 cut(s) | 271, 948, 1498 |
| Bst4CI | ACNGT | 3 cut(s) | 54, 511, 1012 |
| Bst6I | CTCTTC | 2 cut(s) | 1159, 1224 |
| BstAFI | CTTAAG | 1 cut(s) | 514 |
| BstAUI | TGTACA | 1 cut(s) | 1199 |
| BstBI | TTCGAA | 2 cut(s) | 216, 567 |
| BstC8I | GCNNGC | 2 cut(s) | 7, 1326 |
| BstDEI | CTNAG | 3 cut(s) | 486, 1359, 1765 |
| BstF5I | GGATG | 6 cut(s) | 1007, 1325, 1479, 1576, 1707, 1810 |
| BstKTI | GATC | 5 cut(s) | 447, 716, 1452, 1583, 1627 |
| BstMAI | GTCTC | 3 cut(s) | 333, 579, 1272 |
| BstMBI | GATC | 5 cut(s) | 444, 713, 1449, 1580, 1624 |
| BstNI | CCWGG | 3 cut(s) | 271, 948, 1498 |
| BstSCI | CCNGG | 3 cut(s) | 269, 946, 1496 |
| BstSFI | CTRYAG | 1 cut(s) | 1024 |
| BstV1I | GCAGC | 3 cut(s) | 1315, 1413, 1447 |
| BstX2I | RGATCY | 2 cut(s) | 444, 1580 |
| BstYI | RGATCY | 2 cut(s) | 444, 1580 |
| Bsu15I | ATCGAT | 1 cut(s) | 1057 |
| BsuRI | GGCC | 7 cut(s) | 5, 204, 283, 405, 552, 1279, 1674 |
| BsuTUI | ATCGAT | 1 cut(s) | 1057 |
| BtsCI | GGATG | 6 cut(s) | 1007, 1325, 1479, 1576, 1707, 1810 |
| BtsI | GCAGTG | 1 cut(s) | 168 |
| BtsIMutI | CAGTG | 2 cut(s) | 168, 1356 |
| Cac8I | GCNNGC | 2 cut(s) | 7, 1326 |
| CciI | TCATGA | 2 cut(s) | 352, 925 |
| Cfr10I | RCCGGY | 2 cut(s) | 5, 41 |
| Cfr13I | GGNCC | 3 cut(s) | 437, 550, 777 |
| ClaI | ATCGAT | 1 cut(s) | 1057 |
| CseI | GACGC | 1 cut(s) | 305 |
| Csp6I | GTAC | 2 cut(s) | 1200, 1402 |
| CviAII | CATG | 5 cut(s) | 353, 710, 926, 1130, 1193 |
| CviQI | GTAC | 2 cut(s) | 1200, 1402 |
| DdeI | CTNAG | 3 cut(s) | 486, 1359, 1765 |
| DpnI | GATC | 5 cut(s) | 446, 715, 1451, 1582, 1626 |
| DpnII | GATC | 5 cut(s) | 444, 713, 1449, 1580, 1624 |
| EaeI | YGGCCR | 2 cut(s) | 3, 1672 |
| Eam1104I | CTCTTC | 2 cut(s) | 1159, 1224 |
| EarI | CTCTTC | 2 cut(s) | 1159, 1224 |
| Eco31I | GGTCTC | 1 cut(s) | 333 |
| Eco32I | GATATC | 2 cut(s) | 277, 622 |
| Eco47I | GGWCC | 2 cut(s) | 437, 777 |
| Eco57I | CTGAAG | 1 cut(s) | 1710 |
| EcoRII | CCWGG | 3 cut(s) | 269, 946, 1496 |
| EcoRV | GATATC | 2 cut(s) | 277, 622 |
| FaeI | CATG | 5 cut(s) | 356, 713, 929, 1133, 1196 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1203, 1235 |
| FaqI | GGGAC | 2 cut(s) | 47, 1250 |
| FatI | CATG | 5 cut(s) | 352, 709, 925, 1129, 1192 |
| FauNDI | CATATG | 1 cut(s) | 1259 |
| FblI | GTMKAC | 2 cut(s) | 1135, 1833 |
| Fnu4HI | GCNGC | 3 cut(s) | 1329, 1427, 1461 |
| FokI | GGATG | 6 cut(s) | 1014, 1332, 1486, 1583, 1714, 1797 |
| Fsp4HI | GCNGC | 3 cut(s) | 1329, 1427, 1461 |
| FspBI | CTAG | 5 cut(s) | 174, 300, 687, 1593, 1695 |
| GluI | GCNGC | 3 cut(s) | 1329, 1427, 1461 |
| GsuI | CTGGAG | 2 cut(s) | 763, 1480 |
| HaeIII | GGCC | 7 cut(s) | 5, 204, 283, 405, 552, 1279, 1674 |
| HapII | CCGG | 2 cut(s) | 6, 42 |
| HgaI | GACGC | 1 cut(s) | 305 |
| Hin1II | CATG | 5 cut(s) | 356, 713, 929, 1133, 1196 |
| HincII | GTYRAC | 1 cut(s) | 500 |
| HindII | GTYRAC | 1 cut(s) | 500 |
| HindIII | AAGCTT | 2 cut(s) | 797, 1745 |
| HinfI | GANTC | 7 cut(s) | 15, 356, 607, 1059, 1265, 1757, 1763 |
| HpaII | CCGG | 2 cut(s) | 6, 42 |
| HphI | GGTGA | 3 cut(s) | 158, 368, 1246 |
| Hpy166II | GTNNAC | 5 cut(s) | 500, 562, 1136, 1173, 1834 |
| Hpy188I | TCNGA | 5 cut(s) | 321, 718, 1729, 1742, 1762 |
| Hpy8I | GTNNAC | 5 cut(s) | 500, 562, 1136, 1173, 1834 |
| Hpy99I | CGWCG | 1 cut(s) | 785 |
| HpyAV | CCTTC | 2 cut(s) | 108, 242 |
| HpyCH4III | ACNGT | 3 cut(s) | 54, 511, 1012 |
| HpyCH4IV | ACGT | 1 cut(s) | 783 |
| HpyCH4V | TGCA | 6 cut(s) | 25, 227, 1225, 1331, 1377, 1463 |
| HpyF3I | CTNAG | 3 cut(s) | 486, 1359, 1765 |
| HpySE526I | ACGT | 1 cut(s) | 783 |
| Hsp92II | CATG | 5 cut(s) | 356, 713, 929, 1133, 1196 |
| KroI | GCCGGC | 1 cut(s) | 5 |
| KroNI | GCCGGC | 1 cut(s) | 7 |
| Kzo9I | GATC | 5 cut(s) | 444, 713, 1449, 1580, 1624 |
| LmnI | GCTCC | 5 cut(s) | 303, 632, 965, 1206, 1604 |
| Lsp1109I | GCAGC | 3 cut(s) | 1315, 1413, 1447 |
| LweI | GCATC | 3 cut(s) | 460, 1234, 1692 |
| MaeI | CTAG | 5 cut(s) | 174, 300, 687, 1593, 1695 |
| MaeII | ACGT | 1 cut(s) | 783 |
| MaeIII | GTNAC | 2 cut(s) | 163, 986 |
| MalI | GATC | 5 cut(s) | 446, 715, 1451, 1582, 1626 |
| MboI | GATC | 5 cut(s) | 444, 713, 1449, 1580, 1624 |
| MboII | GAAGA | 7 cut(s) | 127, 205, 771, 1176, 1211, 1328, 1342 |
| MfeI | CAATTG | 3 cut(s) | 1273, 1304, 1545 |
| MflI | RGATCY | 2 cut(s) | 444, 1580 |
| MlsI | TGGCCA | 1 cut(s) | 1674 |
| MluNI | TGGCCA | 1 cut(s) | 1674 |
| MlyI | GAGTC | 3 cut(s) | 365, 1274, 1757 |
| MmeI | TCCRAC | 1 cut(s) | 730 |
| Mox20I | TGGCCA | 1 cut(s) | 1674 |
| MroNI | GCCGGC | 1 cut(s) | 5 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1218 |
| MscI | TGGCCA | 1 cut(s) | 1674 |
| MslI | CAYNNNNRTG | 1 cut(s) | 242 |
| Msp20I | TGGCCA | 1 cut(s) | 1674 |
| MspCI | CTTAAG | 1 cut(s) | 514 |
| MspI | CCGG | 2 cut(s) | 6, 42 |
| MspR9I | CCNGG | 3 cut(s) | 271, 948, 1498 |
| MunI | CAATTG | 3 cut(s) | 1273, 1304, 1545 |
| Mva1269I | GAATGC | 3 cut(s) | 306, 850, 1483 |
| MvaI | CCWGG | 3 cut(s) | 271, 948, 1498 |
| NaeI | GCCGGC | 1 cut(s) | 7 |
| NdeI | CATATG | 1 cut(s) | 1259 |
| NdeII | GATC | 5 cut(s) | 444, 713, 1449, 1580, 1624 |
| NgoMIV | GCCGGC | 1 cut(s) | 5 |
| NlaIII | CATG | 5 cut(s) | 356, 713, 929, 1133, 1196 |
| NlaIV | GGNNCC | 4 cut(s) | 413, 439, 1208, 1576 |
| NmuCI | GTSAC | 1 cut(s) | 163 |
| NspV | TTCGAA | 2 cut(s) | 216, 567 |
| PagI | TCATGA | 2 cut(s) | 352, 925 |
| PctI | GAATGC | 3 cut(s) | 306, 850, 1483 |
| PdiI | GCCGGC | 1 cut(s) | 7 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1218 |
| PfeI | GAWTC | 4 cut(s) | 15, 607, 1059, 1757 |
| PkrI | GCNGC | 3 cut(s) | 1330, 1428, 1462 |
| PleI | GAGTC | 3 cut(s) | 364, 1273, 1757 |
| PpsI | GAGTC | 3 cut(s) | 364, 1273, 1757 |
| PsiI | TTATAA | 1 cut(s) | 666 |
| Psp6I | CCWGG | 3 cut(s) | 269, 946, 1496 |
| PspGI | CCWGG | 3 cut(s) | 269, 946, 1496 |
| PspN4I | GGNNCC | 4 cut(s) | 413, 439, 1208, 1576 |
| PspPI | GGNCC | 3 cut(s) | 437, 550, 777 |
| PsuI | RGATCY | 2 cut(s) | 444, 1580 |
| RsaI | GTAC | 2 cut(s) | 1201, 1403 |
| RsaNI | GTAC | 2 cut(s) | 1200, 1402 |
| RseI | CAYNNNNRTG | 1 cut(s) | 242 |
| SatI | GCNGC | 3 cut(s) | 1329, 1427, 1461 |
| Sau3AI | GATC | 5 cut(s) | 444, 713, 1449, 1580, 1624 |
| Sau96I | GGNCC | 3 cut(s) | 437, 550, 777 |
| SchI | GAGTC | 3 cut(s) | 365, 1274, 1757 |
| ScrFI | CCNGG | 3 cut(s) | 271, 948, 1498 |
| SfaNI | GCATC | 3 cut(s) | 460, 1234, 1692 |
| SfcI | CTRYAG | 1 cut(s) | 1024 |
| SfuI | TTCGAA | 2 cut(s) | 216, 567 |
| SinI | GGWCC | 2 cut(s) | 437, 777 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 242 |
| SmlI | CTYRAG | 4 cut(s) | 206, 514, 912, 1482 |
| SmoI | CTYRAG | 4 cut(s) | 206, 514, 912, 1482 |
| SsiI | CCGC | 1 cut(s) | 963 |
| SspMI | CTAG | 5 cut(s) | 174, 300, 687, 1593, 1695 |
| StyD4I | CCNGG | 3 cut(s) | 269, 946, 1496 |
| TaaI | ACNGT | 3 cut(s) | 54, 511, 1012 |
| TaiI | ACGT | 1 cut(s) | 786 |
| TaqI | TCGA | 3 cut(s) | 216, 567, 1057 |
| TaqII | GACCGA | 1 cut(s) | 794 |
| TatI | WGTACW | 1 cut(s) | 1199 |
| TfiI | GAWTC | 4 cut(s) | 15, 607, 1059, 1757 |
| TscAI | CASTG | 2 cut(s) | 168, 1363 |
| TseFI | GTSAC | 1 cut(s) | 163 |
| TseI | GCWGC | 3 cut(s) | 1328, 1426, 1460 |
| Tsp45I | GTSAC | 1 cut(s) | 163 |
| TspGWI | ACGGA | 1 cut(s) | 716 |
| TspRI | CASTG | 2 cut(s) | 168, 1363 |
| Vha464I | CTTAAG | 1 cut(s) | 514 |
| VpaK11BI | GGWCC | 2 cut(s) | 437, 777 |
| XapI | RAATTY | 6 cut(s) | 770, 889, 930, 978, 1070, 1363 |
| XbaI | TCTAGA | 1 cut(s) | 173 |
| XmiI | GTMKAC | 2 cut(s) | 1135, 1833 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1218 |
| XspI | CTAG | 5 cut(s) | 174, 300, 687, 1593, 1695 |