MD15G1145200.v1.1

Belongs to the iron ascorbate-dependent oxidoreductase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Reverse (-)
10752431 .. 10754432
2002 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1145200.v1.1.491

Sequence Viewer

Length: 1122 bp
ATGATGAACATGAACTCATCAATCTCAGACTCCTTCAAAACAAACCCTATCAACCTCTCCCACATTATCCCACTCGATTTCGAATCCGTTCATGCCCTACCCGATTCCCACGTCTGGACTCATAGGAAGGAGGTTGAGATTCCAACACCTTATAATACTCCGTCTTTAGTCTGCGTACCCGTCATTGACCTATTCGATTCGAACGCCGCCTCTCTCATACGCCGTGCATGCGAGAAATGGGGTGTCTTCCAAGTCACCAACCACGGCATTCCCATGCACCTCATGAAAGAAGCCGAGTTCCAAACCCGTCGCTTATTCGCTCTCCCGAGAGACCAAAAGCTCCGGGCCCTCCGATCACCCGAGGGAGTAACCGGGTACGGGTTGGCCCGCATTTCGAAGAACTTCCCGAAGCTGATGTGGTCAGAGGGCTTCACCATCATGGGGTCTCCGGCGGAACATGCTCTTCAACTTTGGCCACGTCACCATGCCAACTTCTGCGATGCAATGGAAGAGTACCAAAAGGAGATGAAGGGCCTAGCCCTAAAATTAATTGGGCTCATGCTTGGATCATTGGGCCTGAACTACGAAGATGTGAAGTGGCTTAAGCCCAAAAATAGCAGCAGGCCACAGACCGTGCTTCAACTGAACTCCTACCCGGTCTGCCCAGACCCGACCCGGGCAATGGGTCTCGCTCCTCACACGGACTCCTCATTGCTCACTTTGCTAAACCAAAGCAGCATAAGCGGCCTCCAAGTCCTTGTGGACGGGATCCGGTGGGTGCCGGCGCACCCGATCCCCGGCGCCCTTGTAGTCAATGTCGGTGATTTAATGCACATACTGTCGAACGGACAATTCAAAAGTGCGGCGCATCGTGCGGTTGTCAACGAAGTACACCATCGCATCTCGATGGCGTACTTCTATGGCCCGCCGATGGACGTGAAGATATCGCCGTTGATTGACCACAATCATCCACTCTATCAGCCGGTAACATGGAAGGAGTACCTCGATTACAAAGCAACGCATTTCGACAAGGCGCTTGAAGTAATCCGGACAGATGCCCAGAAGCTGTACCAGCGTACATCTGATGATTTTGCCTTCGGCCAATGGCCCAATTGTACATAG

Protein Analysis

374

Amino Acids

42.17

Weight (kDa)

7.76

Isoelectric Point (pI)

39.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 59 - 159 1.5e-20 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 212 - 309 8.7e-31 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0014394)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 153
AccB1I GGYRCC 2 cut(s) 778, 800
AccIII TCCGGA 1 cut(s) 1047
AciI CCGC 7 cut(s) 207, 388, 452, 744, 863, 875, 926
AclWI GGATC 4 cut(s) 574, 763, 776, 787
AcoI YGGCCR 2 cut(s) 473, 1099
AcyI GRCGYC 1 cut(s) 801
AfaI GTAC 9 cut(s) 177, 377, 515, 891, 914, 1001, 1070, 1078, 1117
AfiI CCNNNNNNNGG 7 cut(s) 114, 378, 441, 676, 682, 797, 931
AflII CTTAAG 1 cut(s) 602
AgsI TTSAA 5 cut(s) 37, 467, 641, 856, 1040
AjiI CACGTC 3 cut(s) 112, 479, 937
AluBI AGCT 3 cut(s) 340, 412, 1066
AluI AGCT 3 cut(s) 340, 412, 1066
Alw26I GTCTC 3 cut(s) 324, 450, 692
AlwI GGATC 4 cut(s) 574, 763, 776, 787
AlwNI CAGNNNCTG 1 cut(s) 1066
Ama87I CYCGRG 3 cut(s) 325, 359, 675
Aor13HI TCCGGA 1 cut(s) 1047
ApaI GGGCCC 1 cut(s) 349
ApeKI GCWGC 2 cut(s) 618, 735
AseI ATTAAT 1 cut(s) 548
Asp700I GAANNNNTTC 2 cut(s) 87, 401
AspLEI GCGC 4 cut(s) 787, 803, 868, 1036
AspS9I GGNCC 7 cut(s) 345, 346, 385, 532, 574, 923, 1107
AsuC2I CCSGG 6 cut(s) 344, 373, 656, 676, 677, 798
AsuHPI GGTGA 5 cut(s) 247, 348, 424, 473, 833
AsuII TTCGAA 3 cut(s) 81, 200, 395
AvaI CYCGRG 3 cut(s) 325, 359, 675
BaeGI GKGCMC 1 cut(s) 349
BalI TGGCCA 1 cut(s) 475
BamHI GGATCC 1 cut(s) 768
BanI GGYRCC 2 cut(s) 778, 800
BanII GRGCYC 2 cut(s) 349, 558
BbsI GAAGAC 1 cut(s) 238
BbvI GCAGC 2 cut(s) 630, 747
BccI CCATC 4 cut(s) 443, 901, 903, 925
BceAI ACGGC 3 cut(s) 207, 280, 934
BcnI CCSGG 6 cut(s) 344, 373, 656, 676, 677, 798
BcoDI GTCTC 3 cut(s) 324, 450, 692
BfaI CTAG 1 cut(s) 536
BfoI RGCGCY 2 cut(s) 804, 1037
BfrI CTTAAG 1 cut(s) 602
BisI GCNGC 5 cut(s) 207, 619, 736, 745, 864
BlsI GCNGC 5 cut(s) 208, 620, 737, 746, 865
Bme1390I CCNGG 6 cut(s) 344, 373, 656, 676, 677, 798
BmeT110I CYCGRG 3 cut(s) 325, 359, 675
BmgBI CACGTC 3 cut(s) 112, 479, 937
BmgT120I GGNCC 7 cut(s) 345, 346, 385, 532, 574, 923, 1107
BmiI GGNNCC 4 cut(s) 347, 770, 780, 802
BmrFI CCNGG 6 cut(s) 344, 373, 656, 676, 677, 798
BmsI GCATC 4 cut(s) 490, 877, 909, 1045
BpiI GAAGAC 1 cut(s) 238
Bpu14I TTCGAA 3 cut(s) 81, 200, 395
BpuMI CCSGG 6 cut(s) 344, 373, 656, 676, 677, 798
BsaHI GRCGYC 1 cut(s) 801
BsaI GGTCTC 3 cut(s) 324, 450, 692
BsaJI CCNNGG 4 cut(s) 262, 360, 675, 796
BsaWI WCCGGW 2 cut(s) 771, 1047
BsaXI ACNNNNNCTCC 2 cut(s) 689, 719
Bsc4I CCNNNNNNNGG 7 cut(s) 114, 378, 441, 676, 682, 797, 931
Bse118I RCCGGY 2 cut(s) 781, 982
Bse3DI GCAATG 3 cut(s) 510, 687, 710
BseAI TCCGGA 1 cut(s) 1047
BseDI CCNNGG 4 cut(s) 262, 360, 675, 796
BseGI GGATG 1 cut(s) 967
BseLI CCNNNNNNNGG 7 cut(s) 114, 378, 441, 676, 682, 797, 931
BseMI GCAATG 3 cut(s) 510, 687, 710
BseMII CTCAG 1 cut(s) 39
BseRI GAGGAG 2 cut(s) 684, 697
BseSI GKGCMC 1 cut(s) 349
BseXI GCAGC 2 cut(s) 630, 747
BshNI GGYRCC 2 cut(s) 778, 800
BsiHKCI CYCGRG 3 cut(s) 325, 359, 675
BslI CCNNNNNNNGG 7 cut(s) 114, 378, 441, 676, 682, 797, 931
BsmAI GTCTC 3 cut(s) 324, 450, 692
BsmI GAATGC 1 cut(s) 267
Bso31I GGTCTC 3 cut(s) 324, 450, 692
BsoBI CYCGRG 3 cut(s) 325, 359, 675
Bsp119I TTCGAA 3 cut(s) 81, 200, 395
Bsp120I GGGCCC 1 cut(s) 345
Bsp1286I GDGCHC 2 cut(s) 349, 558
Bsp13I TCCGGA 1 cut(s) 1047
Bsp1407I TGTACA 1 cut(s) 1115
Bsp143I GATC 4 cut(s) 353, 566, 768, 792
BspACI CCGC 7 cut(s) 207, 388, 452, 744, 863, 875, 926
BspCNI CTCAG 1 cut(s) 38
BspEI TCCGGA 1 cut(s) 1047
BspHI TCATGA 1 cut(s) 282
BspLI GGNNCC 4 cut(s) 347, 770, 780, 802
BspPI GGATC 4 cut(s) 574, 763, 776, 787
BspQI GCTCTTC 1 cut(s) 468
BspT104I TTCGAA 3 cut(s) 81, 200, 395
BspT107I GGYRCC 2 cut(s) 778, 800
BspTI CTTAAG 1 cut(s) 602
BspTNI GGTCTC 3 cut(s) 324, 450, 692
BsrDI GCAATG 3 cut(s) 510, 687, 710
BsrFI RCCGGY 2 cut(s) 781, 982
BsrGI TGTACA 1 cut(s) 1115
BssAI RCCGGY 2 cut(s) 781, 982
BssECI CCNNGG 4 cut(s) 262, 360, 675, 796
BssMI GATC 4 cut(s) 353, 566, 768, 792
BssNI GRCGYC 1 cut(s) 801
Bst4CI ACNGT 2 cut(s) 634, 840
Bst6I CTCTTC 2 cut(s) 468, 504
BstACI GRCGYC 1 cut(s) 801
BstAFI CTTAAG 1 cut(s) 602
BstAUI TGTACA 1 cut(s) 1115
BstBI TTCGAA 3 cut(s) 81, 200, 395
BstC8I GCNNGC 5 cut(s) 229, 388, 623, 783, 926
BstDEI CTNAG 1 cut(s) 25
BstDSI CCRYGG 1 cut(s) 262
BstF5I GGATG 1 cut(s) 967
BstH2I RGCGCY 2 cut(s) 804, 1037
BstHHI GCGC 4 cut(s) 787, 803, 868, 1036
BstKTI GATC 4 cut(s) 356, 569, 771, 795
BstMAI GTCTC 3 cut(s) 324, 450, 692
BstMBI GATC 4 cut(s) 353, 566, 768, 792
BstMWI GCNNNNNNNGC 7 cut(s) 228, 458, 721, 741, 744, 872, 1072
BstNSI RCATGY 2 cut(s) 231, 461
BstSCI CCNGG 6 cut(s) 342, 371, 654, 674, 675, 796
BstSLI GKGCMC 1 cut(s) 349
BstV1I GCAGC 2 cut(s) 630, 747
BstV2I GAAGAC 1 cut(s) 238
BstX2I RGATCY 1 cut(s) 768
BstYI RGATCY 1 cut(s) 768
BtgI CCRYGG 1 cut(s) 262
BtgZI GCGATG 2 cut(s) 513, 881
BtrI CACGTC 3 cut(s) 112, 479, 937
BtsCI GGATG 1 cut(s) 967
Cac8I GCNNGC 5 cut(s) 229, 388, 623, 783, 926
CaiI CAGNNNCTG 1 cut(s) 1066
CciI TCATGA 1 cut(s) 282
CfoI GCGC 4 cut(s) 787, 803, 868, 1036
Cfr10I RCCGGY 2 cut(s) 781, 982
Cfr13I GGNCC 7 cut(s) 345, 346, 385, 532, 574, 923, 1107
Cfr9I CCCGGG 1 cut(s) 675
Csp6I GTAC 9 cut(s) 176, 376, 514, 890, 913, 1000, 1069, 1077, 1116
CviQI GTAC 9 cut(s) 176, 376, 514, 890, 913, 1000, 1069, 1077, 1116
DdeI CTNAG 1 cut(s) 25
DinI GGCGCC 1 cut(s) 802
DpnI GATC 4 cut(s) 355, 568, 770, 794
DpnII GATC 4 cut(s) 353, 566, 768, 792
EaeI YGGCCR 2 cut(s) 473, 1099
Eam1104I CTCTTC 2 cut(s) 468, 504
EarI CTCTTC 2 cut(s) 468, 504
EciI GGCGGA 1 cut(s) 467
Eco24I GRGCYC 2 cut(s) 349, 558
Eco31I GGTCTC 3 cut(s) 324, 450, 692
Eco32I GATATC 1 cut(s) 945
Eco88I CYCGRG 3 cut(s) 325, 359, 675
EcoO109I RGGNCCY 2 cut(s) 346, 532
EcoRV GATATC 1 cut(s) 945
EcoT38I GRGCYC 2 cut(s) 349, 558
EgeI GGCGCC 1 cut(s) 802
EheI GGCGCC 1 cut(s) 802
FauI CCCGC 2 cut(s) 395, 933
Fnu4HI GCNGC 5 cut(s) 207, 619, 736, 745, 864
FokI GGATG 1 cut(s) 954
FriOI GRGCYC 2 cut(s) 349, 558
Fsp4HI GCNGC 5 cut(s) 207, 619, 736, 745, 864
FspBI CTAG 1 cut(s) 536
GlaI GCGC 4 cut(s) 786, 802, 867, 1035
GluI GCNGC 5 cut(s) 207, 619, 736, 745, 864
HaeII RGCGCY 2 cut(s) 804, 1037
HhaI GCGC 4 cut(s) 787, 803, 868, 1036
Hin1I GRCGYC 1 cut(s) 801
Hin6I GCGC 4 cut(s) 785, 801, 866, 1034
HinP1I GCGC 4 cut(s) 785, 801, 866, 1034
HincII GTYRAC 1 cut(s) 883
HindII GTYRAC 1 cut(s) 883
HinfI GANTC 7 cut(s) 29, 83, 104, 118, 139, 197, 704
HphI GGTGA 5 cut(s) 247, 348, 424, 473, 833
Hpy166II GTNNAC 3 cut(s) 763, 883, 892
Hpy188I TCNGA 4 cut(s) 28, 353, 424, 1084
Hpy188III TCNNGA 6 cut(s) 115, 283, 325, 406, 904, 1048
Hpy8I GTNNAC 3 cut(s) 763, 883, 892
Hpy99I CGWCG 1 cut(s) 312
HpyAV CCTTC 5 cut(s) 43, 121, 523, 988, 1105
HpyCH4III ACNGT 2 cut(s) 634, 840
HpyCH4IV ACGT 3 cut(s) 111, 478, 936
HpyCH4V TGCA 4 cut(s) 227, 277, 503, 832
HpyF10VI GCNNNNNNNGC 7 cut(s) 228, 458, 721, 741, 744, 872, 1072
HpyF3I CTNAG 1 cut(s) 25
HpySE526I ACGT 3 cut(s) 111, 478, 936
Hsp92I GRCGYC 1 cut(s) 801
HspAI GCGC 4 cut(s) 785, 801, 866, 1034
KasI GGCGCC 1 cut(s) 800
Kpn2I TCCGGA 1 cut(s) 1047
KroI GCCGGC 1 cut(s) 781
KroNI GCCGGC 1 cut(s) 783
Kzo9I GATC 4 cut(s) 353, 566, 768, 792
LguI GCTCTTC 1 cut(s) 468
LmnI GCTCC 2 cut(s) 345, 697
Lsp1109I GCAGC 2 cut(s) 630, 747
LweI GCATC 4 cut(s) 490, 877, 909, 1045
MaeI CTAG 1 cut(s) 536
MaeII ACGT 3 cut(s) 111, 478, 936
MaeIII GTNAC 4 cut(s) 253, 367, 479, 985
MalI GATC 4 cut(s) 355, 568, 770, 794
MboI GATC 4 cut(s) 353, 566, 768, 792
MboII GAAGA 6 cut(s) 238, 409, 455, 521, 599, 952
MfeI CAATTG 1 cut(s) 1111
MflI RGATCY 1 cut(s) 768
MhlI GDGCHC 2 cut(s) 349, 558
MlsI TGGCCA 1 cut(s) 475
MluCI AATT 4 cut(s) 545, 549, 851, 1111
MluNI TGGCCA 1 cut(s) 475
Mly113I GGCGCC 1 cut(s) 801
MlyI GAGTC 3 cut(s) 23, 112, 698
MmeI TCCRAC 1 cut(s) 167
Mox20I TGGCCA 1 cut(s) 475
MroI TCCGGA 1 cut(s) 1047
MroNI GCCGGC 1 cut(s) 781
MroXI GAANNNNTTC 2 cut(s) 87, 401
MscI TGGCCA 1 cut(s) 475
MseI TTAA 3 cut(s) 548, 603, 827
MslI CAYNNNNRTG 3 cut(s) 272, 437, 905
Msp20I TGGCCA 1 cut(s) 475
MspCI CTTAAG 1 cut(s) 602
MspR9I CCNGG 6 cut(s) 344, 373, 656, 676, 677, 798
MunI CAATTG 1 cut(s) 1111
Mva1269I GAATGC 1 cut(s) 267
MwoI GCNNNNNNNGC 7 cut(s) 228, 458, 721, 741, 744, 872, 1072
NaeI GCCGGC 1 cut(s) 783
NarI GGCGCC 1 cut(s) 801
NciI CCSGG 6 cut(s) 344, 373, 656, 676, 677, 798
NdeII GATC 4 cut(s) 353, 566, 768, 792
NgoMIV GCCGGC 1 cut(s) 781
NlaIV GGNNCC 4 cut(s) 347, 770, 780, 802
NmeAIII GCCGAG 1 cut(s) 319
NmuCI GTSAC 2 cut(s) 253, 479
NspI RCATGY 2 cut(s) 231, 461
NspV TTCGAA 3 cut(s) 81, 200, 395
PaeI GCATGC 1 cut(s) 231
PagI TCATGA 1 cut(s) 282
PciSI GCTCTTC 1 cut(s) 468
PctI GAATGC 1 cut(s) 267
PdiI GCCGGC 1 cut(s) 783
PdmI GAANNNNTTC 2 cut(s) 87, 401
PfeI GAWTC 4 cut(s) 83, 104, 139, 197
PkrI GCNGC 5 cut(s) 208, 620, 737, 746, 865
PleI GAGTC 3 cut(s) 23, 112, 698
PluTI GGCGCC 1 cut(s) 804
PpsI GAGTC 3 cut(s) 23, 112, 698
PshBI ATTAAT 1 cut(s) 548
PsiI TTATAA 1 cut(s) 153
PspN4I GGNNCC 4 cut(s) 347, 770, 780, 802
PspOMI GGGCCC 1 cut(s) 345
PspPI GGNCC 7 cut(s) 345, 346, 385, 532, 574, 923, 1107
PstNI CAGNNNCTG 1 cut(s) 1066
PsuI RGATCY 1 cut(s) 768
RsaI GTAC 9 cut(s) 177, 377, 515, 891, 914, 1001, 1070, 1078, 1117
RsaNI GTAC 9 cut(s) 176, 376, 514, 890, 913, 1000, 1069, 1077, 1116
RseI CAYNNNNRTG 3 cut(s) 272, 437, 905
SapI GCTCTTC 1 cut(s) 468
SaqAI TTAA 3 cut(s) 548, 603, 827
SatI GCNGC 5 cut(s) 207, 619, 736, 745, 864
Sau3AI GATC 4 cut(s) 353, 566, 768, 792
Sau96I GGNCC 7 cut(s) 345, 346, 385, 532, 574, 923, 1107
SchI GAGTC 3 cut(s) 23, 112, 698
ScrFI CCNGG 6 cut(s) 344, 373, 656, 676, 677, 798
SduI GDGCHC 2 cut(s) 349, 558
SfaNI GCATC 4 cut(s) 490, 877, 909, 1045
SfoI GGCGCC 1 cut(s) 802
SfuI TTCGAA 3 cut(s) 81, 200, 395
SmaI CCCGGG 1 cut(s) 677
SmiMI CAYNNNNRTG 3 cut(s) 272, 437, 905
SmlI CTYRAG 1 cut(s) 602
SmoI CTYRAG 1 cut(s) 602
SphI GCATGC 1 cut(s) 231
Sse9I AATT 4 cut(s) 545, 549, 851, 1111
SsiI CCGC 7 cut(s) 207, 388, 452, 744, 863, 875, 926
SspDI GGCGCC 1 cut(s) 800
SspMI CTAG 1 cut(s) 536
StyD4I CCNGG 6 cut(s) 342, 371, 654, 674, 675, 796
TaaI ACNGT 2 cut(s) 634, 840
TaiI ACGT 3 cut(s) 114, 481, 939
TaqI TCGA 9 cut(s) 75, 81, 195, 200, 395, 842, 905, 1005, 1026
TasI AATT 4 cut(s) 545, 549, 851, 1111
TatI WGTACW 2 cut(s) 889, 1115
TauI GCSGC 3 cut(s) 209, 747, 866
TfiI GAWTC 4 cut(s) 83, 104, 139, 197
Tru1I TTAA 3 cut(s) 548, 603, 827
Tru9I TTAA 3 cut(s) 548, 603, 827
TseFI GTSAC 2 cut(s) 253, 479
TseI GCWGC 2 cut(s) 618, 735
Tsp45I GTSAC 2 cut(s) 253, 479
TspDTI ATGAA 5 cut(s) 20, 26, 80, 299, 542
TspGWI ACGGA 4 cut(s) 76, 150, 716, 861
TspMI CCCGGG 1 cut(s) 675
Vha464I CTTAAG 1 cut(s) 602
VspI ATTAAT 1 cut(s) 548
XceI RCATGY 2 cut(s) 231, 461
XmaI CCCGGG 1 cut(s) 675
XmnI GAANNNNTTC 2 cut(s) 87, 401
XspI CTAG 1 cut(s) 536
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.