Rh2DG048000

Belongs to the iron ascorbate-dependent oxidoreductase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
Physical Location & Seq
Reverse (-)
3427444 .. 3428662
1219 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG048000.1

Sequence Viewer

Length: 1062 bp
ATGAGTTCAACTACTACCCGAAACCTCTCCCATATCGTCCCACTCGACTTCAACTCCATCCACACATTACCCGACTCCCACACTTGGGACTCCTCCACGGACCACCACCCCTTCACAGAACTCGTACCCATCATAGACCTACTTGACCCGAATGCCGCCTCGCTGATACAGCTTGCCTCTGAGCAATGGGGTGTGTTCCAAGTCACCAACCACGGCATTCCAATGAACTTAATCCAAGAGGCGGAGCTACAAGCCCGTGGATTGTTTGAGCTGCCTAGGGACCAAAAACTCCAGGCACTTCGATCACCGGAGAGCTTAACCGGTTACGGGCGAGCCCGCATTTCCGCCAACTTCTCAAAGCTGATGTGGTCGGAGGGTTTCACGATGATCGGGTCTCCGCTTAAACATGCGGCTCAGCTCTGGCCAGATGACCACTCGGTCCAAACCTACTTCTGTAATGTAATGGAGGAGTACCAAAAGAAGATGAAGGGCCTGTGTGGAAAATTGATAAGGATGTTGCTTGGATCATTGGGCTTGGACCATGAAGATGTTAAATGGCTGAACCGGCCCAAAAAGAGTGGCAGAAATTTTCCACAGGTCTTGCAACTGAACTCGTATCCGGTTTGTCCGGACCCGTCCCGAGCCATGGGGTTGGCTCCTCACACAGACTCCTCAATTTTCACAGTGCTAAACCAAAGCAACATAAGTGGCCTGCAAGTCTTTGAGGATGGGATTGGTTGGGTGCCGGTTCACCCGATCCCCGGTGCACTTGTAGTCAATGTAGGTGATTTGTTGCACATACTATCCAACGGCCGGTTCAAGACTGCAGTGCATCGTGCGGTTGTCAATGAGCTATATCACCGCATCTCCATCGCCTACTTCTACAGCCCACCGTACGACGTGAAGATATCACCGCCGATGAAGTTGATAGACCAAGATCATCCTCCCCTATATCGACCGGTAACTTGGAAGGAATACCTTGGTATCAAAGGAGCACATTTCAACAGGGCACTTGATCTAATCAGGAATGACACGGACCAAGCACCATACATGCATGAATAG

Protein Analysis

353

Amino Acids

39.83

Weight (kDa)

6.49

Isoelectric Point (pI)

42.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 42 - 143 4.7e-18 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 199 - 297 6.2e-33 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0014394)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 437
AccB1I GGYRCC 1 cut(s) 742
AccIII TCCGGA 1 cut(s) 628
AciI CCGC 9 cut(s) 156, 242, 337, 345, 398, 410, 839, 862, 914
AclWI GGATC 2 cut(s) 532, 751
AcoI YGGCCR 2 cut(s) 422, 811
AcsI RAATTY 1 cut(s) 586
AfaI GTAC 3 cut(s) 126, 473, 896
AfiI CCNNNNNNNGG 7 cut(s) 84, 85, 241, 327, 646, 761, 813
AgeI ACCGGT 2 cut(s) 320, 958
AgsI TTSAA 4 cut(s) 9, 52, 820, 1003
AjiI CACGTC 1 cut(s) 901
AjnI CCWGG 1 cut(s) 291
AjuI GAANNNNNNNTTGG 2 cut(s) 800, 832
AluBI AGCT 7 cut(s) 172, 247, 271, 315, 361, 418, 853
AluI AGCT 7 cut(s) 172, 247, 271, 315, 361, 418, 853
Alw21I GWGCWC 2 cut(s) 769, 997
Alw26I GTCTC 1 cut(s) 399
Alw44I GTGCAC 1 cut(s) 765
AlwI GGATC 2 cut(s) 532, 751
Ama87I CYCGRG 1 cut(s) 639
Aor13HI TCCGGA 1 cut(s) 628
AoxI GGCC 5 cut(s) 422, 490, 566, 709, 811
ApaLI GTGCAC 1 cut(s) 765
ApeKI GCWGC 1 cut(s) 271
ApoI RAATTY 1 cut(s) 586
AsiGI ACCGGT 2 cut(s) 320, 958
AspA2I CCTAGG 1 cut(s) 275
AspS9I GGNCC 8 cut(s) 100, 280, 439, 490, 538, 567, 631, 1036
AsuC2I CCSGG 1 cut(s) 762
AsuHPI GGTGA 6 cut(s) 196, 297, 743, 797, 851, 903
AvaI CYCGRG 1 cut(s) 639
AvaII GGWCC 6 cut(s) 100, 280, 439, 538, 631, 1036
AvrII CCTAGG 1 cut(s) 275
BaeGI GKGCMC 2 cut(s) 769, 1012
BaeI ACNNNNGTAYC 2 cut(s) 967, 1000
BalI TGGCCA 1 cut(s) 424
BanI GGYRCC 1 cut(s) 742
BanII GRGCYC 1 cut(s) 337
Bbv12I GWGCWC 2 cut(s) 769, 997
BbvI GCAGC 1 cut(s) 258
BccI CCATC 4 cut(s) 65, 137, 722, 878
BceAI ACGGC 2 cut(s) 229, 826
BcgI CGANNNNNNTGC 2 cut(s) 853, 887
BciT130I CCWGG 1 cut(s) 293
BciVI GTATCC 1 cut(s) 627
BcnI CCSGG 1 cut(s) 762
BcoDI GTCTC 1 cut(s) 399
BfaI CTAG 1 cut(s) 276
BfmI CTRYAG 2 cut(s) 825, 883
BfuI GTATCC 1 cut(s) 627
BisI GCNGC 3 cut(s) 156, 272, 411
BlnI CCTAGG 1 cut(s) 275
BlpI GCTNAGC 1 cut(s) 414
BlsI GCNGC 3 cut(s) 157, 273, 412
Bme1390I CCNGG 2 cut(s) 293, 762
Bme18I GGWCC 6 cut(s) 100, 280, 439, 538, 631, 1036
BmeT110I CYCGRG 1 cut(s) 639
BmgBI CACGTC 1 cut(s) 901
BmgT120I GGNCC 8 cut(s) 100, 280, 439, 490, 538, 567, 631, 1036
BmiI GGNNCC 4 cut(s) 281, 633, 657, 744
BmrFI CCNGG 2 cut(s) 293, 762
BmsI GCATC 2 cut(s) 841, 873
BpmI CTGGAG 1 cut(s) 275
Bpu1102I GCTNAGC 1 cut(s) 414
BpuMI CCSGG 1 cut(s) 762
BsaI GGTCTC 1 cut(s) 399
BsaJI CCNNGG 7 cut(s) 96, 211, 256, 275, 645, 760, 979
BsaWI WCCGGW 5 cut(s) 307, 320, 619, 628, 958
BsaXI ACNNNNNCTCC 6 cut(s) 38, 68, 653, 683, 851, 881
Bsc4I CCNNNNNNNGG 7 cut(s) 84, 85, 241, 327, 646, 761, 813
Bse118I RCCGGY 5 cut(s) 320, 564, 745, 813, 958
Bse3DI GCAATG 1 cut(s) 191
BseAI TCCGGA 1 cut(s) 628
BseBI CCWGG 1 cut(s) 293
BseDI CCNNGG 7 cut(s) 96, 211, 256, 275, 645, 760, 979
BseGI GGATG 4 cut(s) 57, 519, 733, 940
BseLI CCNNNNNNNGG 7 cut(s) 84, 85, 241, 327, 646, 761, 813
BseMI GCAATG 1 cut(s) 191
BseMII CTCAG 2 cut(s) 171, 428
BseRI GAGGAG 4 cut(s) 82, 482, 648, 661
BseSI GKGCMC 2 cut(s) 769, 1012
BseX3I CGGCCG 1 cut(s) 811
BseXI GCAGC 1 cut(s) 258
Bsh1285I CGRYCG 2 cut(s) 814, 959
BshFI GGCC 5 cut(s) 424, 492, 568, 711, 813
BshNI GGYRCC 1 cut(s) 742
BshTI ACCGGT 2 cut(s) 320, 958
BsiEI CGRYCG 2 cut(s) 814, 959
BsiHKAI GWGCWC 2 cut(s) 769, 997
BsiHKCI CYCGRG 1 cut(s) 639
BsiSI CCGG 9 cut(s) 308, 321, 565, 620, 629, 746, 762, 814, 959
BsiWI CGTACG 1 cut(s) 894
BslFI GGGAC 4 cut(s) 23, 101, 293, 622
BslI CCNNNNNNNGG 7 cut(s) 84, 85, 241, 327, 646, 761, 813
BsmAI GTCTC 1 cut(s) 399
BsmFI GGGAC 4 cut(s) 23, 101, 293, 622
BsmI GAATGC 2 cut(s) 157, 216
BsnI GGCC 5 cut(s) 424, 492, 568, 711, 813
Bso31I GGTCTC 1 cut(s) 399
BsoBI CYCGRG 1 cut(s) 639
Bsp1286I GDGCHC 4 cut(s) 337, 769, 997, 1012
Bsp13I TCCGGA 1 cut(s) 628
Bsp143I GATC 6 cut(s) 302, 387, 524, 756, 937, 1015
Bsp1720I GCTNAGC 1 cut(s) 414
Bsp19I CCATGG 1 cut(s) 645
BspACI CCGC 9 cut(s) 156, 242, 337, 345, 398, 410, 839, 862, 914
BspANI GGCC 5 cut(s) 424, 492, 568, 711, 813
BspCNI CTCAG 2 cut(s) 172, 427
BspEI TCCGGA 1 cut(s) 628
BspLI GGNNCC 4 cut(s) 281, 633, 657, 744
BspMAI CTGCAG 1 cut(s) 829
BspPI GGATC 2 cut(s) 532, 751
BspT107I GGYRCC 1 cut(s) 742
BspTNI GGTCTC 1 cut(s) 399
BsrDI GCAATG 1 cut(s) 191
BsrFI RCCGGY 5 cut(s) 320, 564, 745, 813, 958
BssAI RCCGGY 5 cut(s) 320, 564, 745, 813, 958
BssECI CCNNGG 7 cut(s) 96, 211, 256, 275, 645, 760, 979
BssMI GATC 6 cut(s) 302, 387, 524, 756, 937, 1015
BssT1I CCWWGG 3 cut(s) 275, 645, 979
Bst2UI CCWGG 1 cut(s) 293
Bst4CI ACNGT 2 cut(s) 685, 894
BstC8I GCNNGC 4 cut(s) 174, 333, 337, 713
BstDEI CTNAG 2 cut(s) 180, 414
BstDSI CCRYGG 4 cut(s) 96, 211, 256, 645
BstF5I GGATG 4 cut(s) 57, 519, 733, 940
BstKTI GATC 6 cut(s) 305, 390, 527, 759, 940, 1018
BstMAI GTCTC 1 cut(s) 399
BstMBI GATC 6 cut(s) 302, 387, 524, 756, 937, 1015
BstMCI CGRYCG 2 cut(s) 814, 959
BstMWI GCNNNNNNNGC 2 cut(s) 169, 565
BstNI CCWGG 1 cut(s) 293
BstNSI RCATGY 2 cut(s) 410, 1054
BstSCI CCNGG 2 cut(s) 291, 760
BstSFI CTRYAG 2 cut(s) 825, 883
BstSLI GKGCMC 2 cut(s) 769, 1012
BstV1I GCAGC 1 cut(s) 258
BstXI CCANNNNNNTGG 1 cut(s) 652
BstZI CGGCCG 1 cut(s) 811
BsuI GTATCC 1 cut(s) 627
BsuRI GGCC 5 cut(s) 424, 492, 568, 711, 813
BtgI CCRYGG 4 cut(s) 96, 211, 256, 645
BtgZI GCGATG 1 cut(s) 856
BtrI CACGTC 1 cut(s) 901
BtsCI GGATG 4 cut(s) 57, 519, 733, 940
BtsI GCAGTG 1 cut(s) 834
BtsIMutI CAGTG 2 cut(s) 690, 834
Cac8I GCNNGC 4 cut(s) 174, 333, 337, 713
Cfr10I RCCGGY 5 cut(s) 320, 564, 745, 813, 958
Cfr13I GGNCC 8 cut(s) 100, 280, 439, 490, 538, 567, 631, 1036
Csp6I GTAC 3 cut(s) 125, 472, 895
CspAI ACCGGT 2 cut(s) 320, 958
CspCI CAANNNNNGTGG 6 cut(s) 559, 582, 594, 617, 688, 723
CviAII CATG 5 cut(s) 407, 542, 646, 1051, 1055
CviQI GTAC 3 cut(s) 125, 472, 895
DdeI CTNAG 2 cut(s) 180, 414
DpnI GATC 6 cut(s) 304, 389, 526, 758, 939, 1017
DpnII GATC 6 cut(s) 302, 387, 524, 756, 937, 1015
DrdI GACNNNNNNGTC 1 cut(s) 437
DseDI GACNNNNNNGTC 1 cut(s) 437
EaeI YGGCCR 2 cut(s) 422, 811
EagI CGGCCG 1 cut(s) 811
EciI GGCGGA 2 cut(s) 257, 334
EclXI CGGCCG 1 cut(s) 811
Eco130I CCWWGG 3 cut(s) 275, 645, 979
Eco24I GRGCYC 1 cut(s) 337
Eco31I GGTCTC 1 cut(s) 399
Eco32I GATATC 1 cut(s) 909
Eco47I GGWCC 6 cut(s) 100, 280, 439, 538, 631, 1036
Eco52I CGGCCG 1 cut(s) 811
Eco88I CYCGRG 1 cut(s) 639
EcoO109I RGGNCCY 1 cut(s) 490
EcoRII CCWGG 1 cut(s) 291
EcoRV GATATC 1 cut(s) 909
EcoT14I CCWWGG 3 cut(s) 275, 645, 979
EcoT22I ATGCAT 1 cut(s) 1056
EcoT38I GRGCYC 1 cut(s) 337
ErhI CCWWGG 3 cut(s) 275, 645, 979
FaeI CATG 5 cut(s) 410, 545, 649, 1054, 1058
FaqI GGGAC 4 cut(s) 23, 101, 293, 622
FatI CATG 5 cut(s) 406, 541, 645, 1050, 1054
FauI CCCGC 1 cut(s) 344
Fnu4HI GCNGC 3 cut(s) 156, 272, 411
FokI GGATG 4 cut(s) 44, 526, 740, 927
FriOI GRGCYC 1 cut(s) 337
Fsp4HI GCNGC 3 cut(s) 156, 272, 411
FspBI CTAG 1 cut(s) 276
GluI GCNGC 3 cut(s) 156, 272, 411
GsuI CTGGAG 1 cut(s) 275
HaeIII GGCC 5 cut(s) 424, 492, 568, 711, 813
HapII CCGG 9 cut(s) 308, 321, 565, 620, 629, 746, 762, 814, 959
Hin1II CATG 5 cut(s) 410, 545, 649, 1054, 1058
HinfI GANTC 3 cut(s) 74, 89, 668
HpaII CCGG 9 cut(s) 308, 321, 565, 620, 629, 746, 762, 814, 959
HphI GGTGA 6 cut(s) 196, 297, 743, 797, 851, 903
Hpy166II GTNNAC 2 cut(s) 751, 767
Hpy188I TCNGA 2 cut(s) 181, 373
Hpy188III TCNNGA 5 cut(s) 382, 629, 639, 820, 1024
Hpy8I GTNNAC 2 cut(s) 751, 767
Hpy99I CGWCG 1 cut(s) 902
HpyAV CCTTC 3 cut(s) 121, 481, 964
HpyCH4III ACNGT 2 cut(s) 685, 894
HpyCH4IV ACGT 1 cut(s) 900
HpyCH4V TGCA 7 cut(s) 604, 715, 767, 796, 827, 832, 1054
HpyF10VI GCNNNNNNNGC 2 cut(s) 169, 565
HpyF3I CTNAG 2 cut(s) 180, 414
HpySE526I ACGT 1 cut(s) 900
Hsp92II CATG 5 cut(s) 410, 545, 649, 1054, 1058
Kpn2I TCCGGA 1 cut(s) 628
Kzo9I GATC 6 cut(s) 302, 387, 524, 756, 937, 1015
LmnI GCTCC 3 cut(s) 244, 661, 992
Lsp1109I GCAGC 1 cut(s) 258
LweI GCATC 2 cut(s) 841, 873
MaeI CTAG 1 cut(s) 276
MaeII ACGT 1 cut(s) 900
MaeIII GTNAC 3 cut(s) 202, 323, 961
MalI GATC 6 cut(s) 304, 389, 526, 758, 939, 1017
MboI GATC 6 cut(s) 302, 387, 524, 756, 937, 1015
MboII GAAGA 3 cut(s) 493, 557, 916
MhlI GDGCHC 4 cut(s) 337, 769, 997, 1012
MlsI TGGCCA 1 cut(s) 424
MluCI AATT 3 cut(s) 503, 586, 675
MluNI TGGCCA 1 cut(s) 424
MlyI GAGTC 3 cut(s) 68, 83, 662
MmeI TCCRAC 2 cut(s) 351, 831
Mox20I TGGCCA 1 cut(s) 424
Mph1103I ATGCAT 1 cut(s) 1056
MroI TCCGGA 1 cut(s) 628
MscI TGGCCA 1 cut(s) 424
MseI TTAA 4 cut(s) 230, 317, 402, 552
MslI CAYNNNNRTG 2 cut(s) 221, 546
Msp20I TGGCCA 1 cut(s) 424
MspI CCGG 9 cut(s) 308, 321, 565, 620, 629, 746, 762, 814, 959
MspR9I CCNGG 2 cut(s) 293, 762
Mva1269I GAATGC 2 cut(s) 157, 216
MvaI CCWGG 1 cut(s) 293
MwoI GCNNNNNNNGC 2 cut(s) 169, 565
NciI CCSGG 1 cut(s) 762
NcoI CCATGG 1 cut(s) 645
NdeII GATC 6 cut(s) 302, 387, 524, 756, 937, 1015
NlaIII CATG 5 cut(s) 410, 545, 649, 1054, 1058
NlaIV GGNNCC 4 cut(s) 281, 633, 657, 744
NmuCI GTSAC 1 cut(s) 202
NsiI ATGCAT 1 cut(s) 1056
NspI RCATGY 2 cut(s) 410, 1054
PcsI WCGNNNNNNNCGW 1 cut(s) 42
PctI GAATGC 2 cut(s) 157, 216
Pfl23II CGTACG 1 cut(s) 894
PinAI ACCGGT 2 cut(s) 320, 958
PkrI GCNGC 3 cut(s) 157, 273, 412
PleI GAGTC 3 cut(s) 68, 83, 662
PpsI GAGTC 3 cut(s) 68, 83, 662
Psp6I CCWGG 1 cut(s) 291
PspGI CCWGG 1 cut(s) 291
PspLI CGTACG 1 cut(s) 894
PspN4I GGNNCC 4 cut(s) 281, 633, 657, 744
PspPI GGNCC 8 cut(s) 100, 280, 439, 490, 538, 567, 631, 1036
PstI CTGCAG 1 cut(s) 829
RsaI GTAC 3 cut(s) 126, 473, 896
RsaNI GTAC 3 cut(s) 125, 472, 895
RseI CAYNNNNRTG 2 cut(s) 221, 546
SaqAI TTAA 4 cut(s) 230, 317, 402, 552
SatI GCNGC 3 cut(s) 156, 272, 411
Sau3AI GATC 6 cut(s) 302, 387, 524, 756, 937, 1015
Sau96I GGNCC 8 cut(s) 100, 280, 439, 490, 538, 567, 631, 1036
SchI GAGTC 3 cut(s) 68, 83, 662
ScrFI CCNGG 2 cut(s) 293, 762
SduI GDGCHC 4 cut(s) 337, 769, 997, 1012
SfaNI GCATC 2 cut(s) 841, 873
SfcI CTRYAG 2 cut(s) 825, 883
SinI GGWCC 6 cut(s) 100, 280, 439, 538, 631, 1036
SmiMI CAYNNNNRTG 2 cut(s) 221, 546
Sse9I AATT 3 cut(s) 503, 586, 675
SsiI CCGC 9 cut(s) 156, 242, 337, 345, 398, 410, 839, 862, 914
SspMI CTAG 1 cut(s) 276
StyD4I CCNGG 2 cut(s) 291, 760
StyI CCWWGG 3 cut(s) 275, 645, 979
TaaI ACNGT 2 cut(s) 685, 894
TaiI ACGT 1 cut(s) 903
TaqI TCGA 3 cut(s) 45, 301, 955
TaqII GACCGA 1 cut(s) 427
TasI AATT 3 cut(s) 503, 586, 675
TauI GCSGC 2 cut(s) 158, 413
Tru1I TTAA 4 cut(s) 230, 317, 402, 552
Tru9I TTAA 4 cut(s) 230, 317, 402, 552
TscAI CASTG 2 cut(s) 690, 834
TseFI GTSAC 1 cut(s) 202
TseI GCWGC 1 cut(s) 271
Tsp45I GTSAC 1 cut(s) 202
TspDTI ATGAA 4 cut(s) 239, 500, 558, 935
TspGWI ACGGA 2 cut(s) 113, 1049
TspRI CASTG 2 cut(s) 690, 834
VneI GTGCAC 1 cut(s) 765
VpaK11BI GGWCC 6 cut(s) 100, 280, 439, 538, 631, 1036
XapI RAATTY 1 cut(s) 586
XceI RCATGY 2 cut(s) 410, 1054
XmaJI CCTAGG 1 cut(s) 275
XspI CTAG 1 cut(s) 276
Zsp2I ATGCAT 1 cut(s) 1056
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.