Rroxscaffold_2G00151670

Belongs to the iron ascorbate-dependent oxidoreductase family

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Forward (+)
88866206 .. 88867396
1191 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00151670.1

Sequence Viewer

Length: 1095 bp
ATGAGTTCAACTGCTACCCGAAACCTCTCCCATATCGTCCCACTCGACTTCAACTCCATCCACACATTACCCGACTCCCACACTTGGGACTCCTCGACGGACCACCACCCCTTCACAGAACTCCTACCCATCATAGACCTACTCGACCCGAATGCCGCCTCGCTCATACAGCTTGCCTCTGAGCAATGGGGTGTCTTCCAAGTCACCAACCACGGCATTCCAATGAACTTAATCCAAGAAGCGGAGCTACAAGCCCGTGGATTGTTTGAGCTGCCTAGGGACCAAAAACTCCAGGCACTTCGATCACCGGAGAGCTTAACCGGTTATGGGCGAGCCCGCATTTCCGCCAACTTCTCAAAGCTGATGTGGTCGGAGGGTTTCACGATGATCGGGTCTCCGCTTGAACATGCGGCTCAACTCTGGCCAGATGACCACTCGATATTAGTCATGTTACTATGTGTGTATGACCATTTTGACCCTGAAGATGCCTGCTCATGCAGTAATGTAATGGAGGAGTACCAAAAGAAGATGAAGGGCCTATGTGGAAAATTGATAAGGCTGATGCTTGGCTCATTGGGCTTGGACCATGAAGATGTTAAATGGCTGAACCGGCCCAAAAAGAGTGGCAGAAATTTTCCACAGGTCTTGCAACTGAACTCGTATCCGGTTTGTCCGGACCCGACCCGAGCCATGGGGTTGGCTCCTCACACAGACTCCTCAATTTTCACGGTGCTAAACCAAAGCAACATAAGTGGCCTGCAAGTCTTTGAGGATGGGATTGGTTGGGTGCCGGTTCACCCGATCCCCGGTGCACTTGTAGTCAATGTAGGTGATTTGATGCACATACTATCCAACGGCCGGTTCAAGGCTGCAGTGCATCGTGCGGTTGTCAATGAGCTATATCACCGCATCTCCATCGCCTACTTCTACAGCCCACCGTACGACGTGAAGATATCGCCGCCGATGAAGTTGATCGACCAAGATCATCCTCCCCTATATCGACCGGTAACTTGGAAGGAATACCTTGGTATCAAGGGAACACATTTCAACAGGGCACTTGATCTAATCAGGAATGACACGGACCAAGCACCGTAG

Protein Analysis

364

Amino Acids

40.9

Weight (kDa)

5.99

Isoelectric Point (pI)

43.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 42 - 143 4.7e-18 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 214 - 312 1.7e-32 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0014394)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 787
AccIII TCCGGA 1 cut(s) 673
AciI CCGC 9 cut(s) 156, 242, 337, 345, 398, 410, 884, 907, 959
AclWI GGATC 1 cut(s) 796
AcoI YGGCCR 2 cut(s) 422, 856
AcsI RAATTY 1 cut(s) 631
AcuI CTGAAG 1 cut(s) 501
AfaI GTAC 2 cut(s) 518, 941
AfiI CCNNNNNNNGG 8 cut(s) 84, 85, 241, 327, 691, 806, 858, 865
AgeI ACCGGT 2 cut(s) 320, 1003
AgsI TTSAA 5 cut(s) 9, 52, 404, 865, 1048
AjiI CACGTC 1 cut(s) 946
AjnI CCWGG 1 cut(s) 291
AjuI GAANNNNNNNTTGG 2 cut(s) 845, 877
AluBI AGCT 6 cut(s) 172, 247, 271, 315, 361, 898
AluI AGCT 6 cut(s) 172, 247, 271, 315, 361, 898
Alw21I GWGCWC 1 cut(s) 814
Alw26I GTCTC 1 cut(s) 399
Alw44I GTGCAC 1 cut(s) 810
AlwI GGATC 1 cut(s) 796
Ama87I CYCGRG 1 cut(s) 684
Aor13HI TCCGGA 1 cut(s) 673
AoxI GGCC 5 cut(s) 422, 535, 611, 754, 856
ApaLI GTGCAC 1 cut(s) 810
ApeKI GCWGC 2 cut(s) 271, 869
ApoI RAATTY 1 cut(s) 631
AsiGI ACCGGT 2 cut(s) 320, 1003
AspA2I CCTAGG 1 cut(s) 275
AspS9I GGNCC 7 cut(s) 100, 280, 535, 583, 612, 676, 1081
AsuC2I CCSGG 1 cut(s) 807
AsuHPI GGTGA 5 cut(s) 196, 297, 788, 842, 896
AvaI CYCGRG 1 cut(s) 684
AvaII GGWCC 5 cut(s) 100, 280, 583, 676, 1081
AvrII CCTAGG 1 cut(s) 275
BaeGI GKGCMC 2 cut(s) 814, 1057
BaeI ACNNNNGTAYC 2 cut(s) 1012, 1045
BalI TGGCCA 1 cut(s) 424
BanI GGYRCC 1 cut(s) 787
BanII GRGCYC 1 cut(s) 337
BarI GAAGNNNNNNTAC 2 cut(s) 231, 263
BbsI GAAGAC 1 cut(s) 187
Bbv12I GWGCWC 1 cut(s) 814
BbvI GCAGC 2 cut(s) 258, 856
BccI CCATC 4 cut(s) 65, 137, 767, 923
BceAI ACGGC 2 cut(s) 229, 871
BcgI CGANNNNNNTGC 4 cut(s) 134, 168, 898, 932
BciT130I CCWGG 1 cut(s) 293
BciVI GTATCC 1 cut(s) 672
BcnI CCSGG 1 cut(s) 807
BcoDI GTCTC 1 cut(s) 399
BfaI CTAG 1 cut(s) 276
BfmI CTRYAG 2 cut(s) 870, 928
BfuI GTATCC 1 cut(s) 672
BisI GCNGC 5 cut(s) 156, 272, 411, 870, 959
BlnI CCTAGG 1 cut(s) 275
BlsI GCNGC 5 cut(s) 157, 273, 412, 871, 960
Bme1390I CCNGG 2 cut(s) 293, 807
Bme18I GGWCC 5 cut(s) 100, 280, 583, 676, 1081
BmeT110I CYCGRG 1 cut(s) 684
BmgBI CACGTC 1 cut(s) 946
BmgT120I GGNCC 7 cut(s) 100, 280, 535, 583, 612, 676, 1081
BmiI GGNNCC 4 cut(s) 281, 678, 702, 789
BmrFI CCNGG 2 cut(s) 293, 807
BmsI GCATC 5 cut(s) 475, 552, 828, 886, 918
BpiI GAAGAC 1 cut(s) 187
BpmI CTGGAG 1 cut(s) 275
BpuMI CCSGG 1 cut(s) 807
BsaI GGTCTC 1 cut(s) 399
BsaJI CCNNGG 6 cut(s) 211, 256, 275, 690, 805, 1024
BsaWI WCCGGW 5 cut(s) 307, 320, 664, 673, 1003
BsaXI ACNNNNNCTCC 6 cut(s) 38, 68, 698, 728, 896, 926
Bsc4I CCNNNNNNNGG 8 cut(s) 84, 85, 241, 327, 691, 806, 858, 865
Bse118I RCCGGY 5 cut(s) 320, 609, 790, 858, 1003
Bse3DI GCAATG 1 cut(s) 191
BseAI TCCGGA 1 cut(s) 673
BseBI CCWGG 1 cut(s) 293
BseDI CCNNGG 6 cut(s) 211, 256, 275, 690, 805, 1024
BseGI GGATG 3 cut(s) 57, 778, 985
BseLI CCNNNNNNNGG 8 cut(s) 84, 85, 241, 327, 691, 806, 858, 865
BseMI GCAATG 1 cut(s) 191
BseMII CTCAG 1 cut(s) 171
BseRI GAGGAG 4 cut(s) 82, 527, 693, 706
BseSI GKGCMC 2 cut(s) 814, 1057
BseX3I CGGCCG 1 cut(s) 856
BseXI GCAGC 2 cut(s) 258, 856
Bsh1285I CGRYCG 2 cut(s) 859, 1004
BshFI GGCC 5 cut(s) 424, 537, 613, 756, 858
BshNI GGYRCC 1 cut(s) 787
BshTI ACCGGT 2 cut(s) 320, 1003
BsiEI CGRYCG 2 cut(s) 859, 1004
BsiHKAI GWGCWC 1 cut(s) 814
BsiHKCI CYCGRG 1 cut(s) 684
BsiSI CCGG 9 cut(s) 308, 321, 610, 665, 674, 791, 807, 859, 1004
BsiWI CGTACG 1 cut(s) 939
BslFI GGGAC 3 cut(s) 23, 101, 293
BslI CCNNNNNNNGG 8 cut(s) 84, 85, 241, 327, 691, 806, 858, 865
BsmAI GTCTC 1 cut(s) 399
BsmFI GGGAC 3 cut(s) 23, 101, 293
BsmI GAATGC 2 cut(s) 157, 216
BsnI GGCC 5 cut(s) 424, 537, 613, 756, 858
Bso31I GGTCTC 1 cut(s) 399
BsoBI CYCGRG 1 cut(s) 684
Bsp1286I GDGCHC 3 cut(s) 337, 814, 1057
Bsp13I TCCGGA 1 cut(s) 673
Bsp143I GATC 6 cut(s) 302, 387, 801, 972, 982, 1060
Bsp19I CCATGG 1 cut(s) 690
BspACI CCGC 9 cut(s) 156, 242, 337, 345, 398, 410, 884, 907, 959
BspANI GGCC 5 cut(s) 424, 537, 613, 756, 858
BspCNI CTCAG 1 cut(s) 172
BspEI TCCGGA 1 cut(s) 673
BspLI GGNNCC 4 cut(s) 281, 678, 702, 789
BspMAI CTGCAG 1 cut(s) 874
BspPI GGATC 1 cut(s) 796
BspT107I GGYRCC 1 cut(s) 787
BspTNI GGTCTC 1 cut(s) 399
BsrDI GCAATG 1 cut(s) 191
BsrFI RCCGGY 5 cut(s) 320, 609, 790, 858, 1003
BssAI RCCGGY 5 cut(s) 320, 609, 790, 858, 1003
BssECI CCNNGG 6 cut(s) 211, 256, 275, 690, 805, 1024
BssMI GATC 6 cut(s) 302, 387, 801, 972, 982, 1060
BssT1I CCWWGG 3 cut(s) 275, 690, 1024
Bst2UI CCWGG 1 cut(s) 293
Bst4CI ACNGT 3 cut(s) 730, 939, 1092
BstC8I GCNNGC 5 cut(s) 174, 333, 337, 490, 758
BstDEI CTNAG 1 cut(s) 180
BstDSI CCRYGG 3 cut(s) 211, 256, 690
BstF5I GGATG 3 cut(s) 57, 778, 985
BstKTI GATC 6 cut(s) 305, 390, 804, 975, 985, 1063
BstMAI GTCTC 1 cut(s) 399
BstMBI GATC 6 cut(s) 302, 387, 801, 972, 982, 1060
BstMCI CGRYCG 2 cut(s) 859, 1004
BstMWI GCNNNNNNNGC 3 cut(s) 169, 576, 610
BstNI CCWGG 1 cut(s) 293
BstNSI RCATGY 1 cut(s) 410
BstSCI CCNGG 2 cut(s) 291, 805
BstSFI CTRYAG 2 cut(s) 870, 928
BstSLI GKGCMC 2 cut(s) 814, 1057
BstV1I GCAGC 2 cut(s) 258, 856
BstV2I GAAGAC 1 cut(s) 187
BstXI CCANNNNNNTGG 1 cut(s) 697
BstZI CGGCCG 1 cut(s) 856
BsuI GTATCC 1 cut(s) 672
BsuRI GGCC 5 cut(s) 424, 537, 613, 756, 858
BtgI CCRYGG 3 cut(s) 211, 256, 690
BtgZI GCGATG 1 cut(s) 901
BtrI CACGTC 1 cut(s) 946
BtsCI GGATG 3 cut(s) 57, 778, 985
BtsI GCAGTG 1 cut(s) 879
BtsIMutI CAGTG 1 cut(s) 879
Cac8I GCNNGC 5 cut(s) 174, 333, 337, 490, 758
Cfr10I RCCGGY 5 cut(s) 320, 609, 790, 858, 1003
Cfr13I GGNCC 7 cut(s) 100, 280, 535, 583, 612, 676, 1081
Csp6I GTAC 2 cut(s) 517, 940
CspAI ACCGGT 2 cut(s) 320, 1003
CspCI CAANNNNNGTGG 6 cut(s) 604, 627, 639, 662, 733, 768
CviAII CATG 5 cut(s) 407, 448, 495, 587, 691
CviQI GTAC 2 cut(s) 517, 940
DdeI CTNAG 1 cut(s) 180
DpnI GATC 6 cut(s) 304, 389, 803, 974, 984, 1062
DpnII GATC 6 cut(s) 302, 387, 801, 972, 982, 1060
EaeI YGGCCR 2 cut(s) 422, 856
EagI CGGCCG 1 cut(s) 856
EciI GGCGGA 1 cut(s) 334
EclXI CGGCCG 1 cut(s) 856
Eco130I CCWWGG 3 cut(s) 275, 690, 1024
Eco24I GRGCYC 1 cut(s) 337
Eco31I GGTCTC 1 cut(s) 399
Eco32I GATATC 1 cut(s) 954
Eco47I GGWCC 5 cut(s) 100, 280, 583, 676, 1081
Eco52I CGGCCG 1 cut(s) 856
Eco57I CTGAAG 1 cut(s) 501
Eco88I CYCGRG 1 cut(s) 684
EcoO109I RGGNCCY 1 cut(s) 535
EcoRII CCWGG 1 cut(s) 291
EcoRV GATATC 1 cut(s) 954
EcoT14I CCWWGG 3 cut(s) 275, 690, 1024
EcoT38I GRGCYC 1 cut(s) 337
ErhI CCWWGG 3 cut(s) 275, 690, 1024
FaeI CATG 5 cut(s) 410, 451, 498, 590, 694
FaqI GGGAC 3 cut(s) 23, 101, 293
FatI CATG 5 cut(s) 406, 447, 494, 586, 690
FauI CCCGC 1 cut(s) 344
Fnu4HI GCNGC 5 cut(s) 156, 272, 411, 870, 959
FokI GGATG 3 cut(s) 44, 785, 972
FriOI GRGCYC 1 cut(s) 337
Fsp4HI GCNGC 5 cut(s) 156, 272, 411, 870, 959
FspBI CTAG 1 cut(s) 276
GluI GCNGC 5 cut(s) 156, 272, 411, 870, 959
GsuI CTGGAG 1 cut(s) 275
HaeIII GGCC 5 cut(s) 424, 537, 613, 756, 858
HapII CCGG 9 cut(s) 308, 321, 610, 665, 674, 791, 807, 859, 1004
Hin1II CATG 5 cut(s) 410, 451, 498, 590, 694
HinfI GANTC 3 cut(s) 74, 89, 713
HpaII CCGG 9 cut(s) 308, 321, 610, 665, 674, 791, 807, 859, 1004
HphI GGTGA 5 cut(s) 196, 297, 788, 842, 896
Hpy166II GTNNAC 2 cut(s) 796, 812
Hpy188I TCNGA 2 cut(s) 181, 373
Hpy188III TCNNGA 3 cut(s) 382, 674, 1069
Hpy8I GTNNAC 2 cut(s) 796, 812
Hpy99I CGWCG 2 cut(s) 100, 947
HpyAV CCTTC 3 cut(s) 121, 526, 1009
HpyCH4III ACNGT 3 cut(s) 730, 939, 1092
HpyCH4IV ACGT 1 cut(s) 945
HpyCH4V TGCA 7 cut(s) 498, 649, 760, 812, 841, 872, 877
HpyF10VI GCNNNNNNNGC 3 cut(s) 169, 576, 610
HpyF3I CTNAG 1 cut(s) 180
HpySE526I ACGT 1 cut(s) 945
Hsp92II CATG 5 cut(s) 410, 451, 498, 590, 694
Kpn2I TCCGGA 1 cut(s) 673
Kzo9I GATC 6 cut(s) 302, 387, 801, 972, 982, 1060
LmnI GCTCC 2 cut(s) 244, 706
Lsp1109I GCAGC 2 cut(s) 258, 856
LweI GCATC 5 cut(s) 475, 552, 828, 886, 918
MaeI CTAG 1 cut(s) 276
MaeII ACGT 1 cut(s) 945
MaeIII GTNAC 3 cut(s) 202, 450, 1006
MalI GATC 6 cut(s) 304, 389, 803, 974, 984, 1062
MboI GATC 6 cut(s) 302, 387, 801, 972, 982, 1060
MboII GAAGA 5 cut(s) 187, 494, 538, 602, 961
MhlI GDGCHC 3 cut(s) 337, 814, 1057
MlsI TGGCCA 1 cut(s) 424
MluCI AATT 3 cut(s) 548, 631, 720
MluNI TGGCCA 1 cut(s) 424
MlyI GAGTC 3 cut(s) 68, 83, 707
MmeI TCCRAC 2 cut(s) 351, 876
Mox20I TGGCCA 1 cut(s) 424
MroI TCCGGA 1 cut(s) 673
MscI TGGCCA 1 cut(s) 424
MseI TTAA 3 cut(s) 230, 317, 597
MslI CAYNNNNRTG 2 cut(s) 221, 591
Msp20I TGGCCA 1 cut(s) 424
MspI CCGG 9 cut(s) 308, 321, 610, 665, 674, 791, 807, 859, 1004
MspR9I CCNGG 2 cut(s) 293, 807
Mva1269I GAATGC 2 cut(s) 157, 216
MvaI CCWGG 1 cut(s) 293
MwoI GCNNNNNNNGC 3 cut(s) 169, 576, 610
NciI CCSGG 1 cut(s) 807
NcoI CCATGG 1 cut(s) 690
NdeII GATC 6 cut(s) 302, 387, 801, 972, 982, 1060
NlaIII CATG 5 cut(s) 410, 451, 498, 590, 694
NlaIV GGNNCC 4 cut(s) 281, 678, 702, 789
NmuCI GTSAC 1 cut(s) 202
NspI RCATGY 1 cut(s) 410
PcsI WCGNNNNNNNCGW 1 cut(s) 42
PctI GAATGC 2 cut(s) 157, 216
Pfl23II CGTACG 1 cut(s) 939
PinAI ACCGGT 2 cut(s) 320, 1003
PkrI GCNGC 5 cut(s) 157, 273, 412, 871, 960
PleI GAGTC 3 cut(s) 68, 83, 707
PpsI GAGTC 3 cut(s) 68, 83, 707
Psp6I CCWGG 1 cut(s) 291
PspGI CCWGG 1 cut(s) 291
PspLI CGTACG 1 cut(s) 939
PspN4I GGNNCC 4 cut(s) 281, 678, 702, 789
PspPI GGNCC 7 cut(s) 100, 280, 535, 583, 612, 676, 1081
PstI CTGCAG 1 cut(s) 874
RsaI GTAC 2 cut(s) 518, 941
RsaNI GTAC 2 cut(s) 517, 940
RseI CAYNNNNRTG 2 cut(s) 221, 591
SaqAI TTAA 3 cut(s) 230, 317, 597
SatI GCNGC 5 cut(s) 156, 272, 411, 870, 959
Sau3AI GATC 6 cut(s) 302, 387, 801, 972, 982, 1060
Sau96I GGNCC 7 cut(s) 100, 280, 535, 583, 612, 676, 1081
SchI GAGTC 3 cut(s) 68, 83, 707
ScrFI CCNGG 2 cut(s) 293, 807
SduI GDGCHC 3 cut(s) 337, 814, 1057
SfaNI GCATC 5 cut(s) 475, 552, 828, 886, 918
SfcI CTRYAG 2 cut(s) 870, 928
SinI GGWCC 5 cut(s) 100, 280, 583, 676, 1081
SmiMI CAYNNNNRTG 2 cut(s) 221, 591
Sse9I AATT 3 cut(s) 548, 631, 720
SsiI CCGC 9 cut(s) 156, 242, 337, 345, 398, 410, 884, 907, 959
SspMI CTAG 1 cut(s) 276
StyD4I CCNGG 2 cut(s) 291, 805
StyI CCWWGG 3 cut(s) 275, 690, 1024
TaaI ACNGT 3 cut(s) 730, 939, 1092
TaiI ACGT 1 cut(s) 948
TaqI TCGA 7 cut(s) 45, 95, 144, 301, 437, 975, 1000
TasI AATT 3 cut(s) 548, 631, 720
TauI GCSGC 3 cut(s) 158, 413, 961
Tru1I TTAA 3 cut(s) 230, 317, 597
Tru9I TTAA 3 cut(s) 230, 317, 597
TscAI CASTG 1 cut(s) 879
TseFI GTSAC 1 cut(s) 202
TseI GCWGC 2 cut(s) 271, 869
Tsp45I GTSAC 1 cut(s) 202
TspDTI ATGAA 4 cut(s) 239, 545, 603, 980
TspGWI ACGGA 2 cut(s) 113, 1094
TspRI CASTG 1 cut(s) 879
VneI GTGCAC 1 cut(s) 810
VpaK11BI GGWCC 5 cut(s) 100, 280, 583, 676, 1081
XapI RAATTY 1 cut(s) 631
XceI RCATGY 1 cut(s) 410
XmaJI CCTAGG 1 cut(s) 275
XspI CTAG 1 cut(s) 276
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.