RLG00000016051

Belongs to the iron ascorbate-dependent oxidoreductase family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Reverse (-)
3497922 .. 3499153
1232 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000016051

Sequence Viewer

Length: 1098 bp
ATGAGTTCAACTACTACCCGAAACCTCTCCCATATCGTCCCGCTCGACTTCAACTCCATCCACACATTACCCGACTCCCACACTTGGGACTCCTCCACGGACCACCACCCGATCACAGAACTCGTACCCATCATAGACATACTCGACCCGAAGGCCGCCTCGCTCATACAGCTTGCCTCTGAGCAATGGGGTGTGTTCCAAGTCACCAACCACGGCATTCCAATGAACATAATCCAAGAAGCGGAGCTACAAGCCCGTGGATTGTTTGAGCTGCCTAGGGACCAAAAACTGCAGGCACTTCGATCACCGGAGAGCTTAACAGGTTACGGGCGAGCCCGCATTTCCGCCAACTTCTCAAAGCTGATGTGGTCGGAGGGTTTCACGATGATCGGGTCTCCGCTTGAACATGCGGCTCAGCTCTGGCCAGATGACCACTCGGTCCAAACCTACTTCTGCAATGTAATGGAAGAGTACCAAAAGAAGATGAAGGGCCTATGTGGAAAATTGATAAGGCTGATGCTTGGATCATTGGGCTTGGACCATGAAGATGTTAAATGGCTGAACCGGCCCAAAAAGAGTGGCAGAAAGTTTCCACAGGTCTTGCAACTGAACTCGTATCCGGTTTGTCCGGACCCGACCCGAGCCATGGGGTTGGCTCCCCACACAGACTCCTCAATTTTCACAGTGCTAAACCAAAGCAACGTAAGCGGCCTGCAAGTCTTTGAGGATGGGATTGGTTGGGTGCCGGTTCACCCGATCCCCGGTGCACTTGTAGTCAATGTAGGTGATTTGATGCACATACTATCCAACGGCCGGTTCAGGGCTGCAGTGCATCGTGCGGTTGTCAGTGAGCTATGTCACCGCATCTCCATCGCCTACTTCTACAGCCCACCGTACGACGTGAAGATATCACCGCCGATGAAGTTGATCGACCAAGATCATCCTCCCCTATATCGACCGGTAACTTGGAAGGAATACCTTGGTATCAAGGGCACACATTTCAACAGGGCACTTGATCTAATCAGGAATGACACGGACCAAGCACCAAACATGTCCACTTGTCACATAGCAAACCCGAAAGCCGAAATGACTAGTTAG

Protein Analysis

366

Amino Acids

40.94

Weight (kDa)

6.62

Isoelectric Point (pI)

44.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 42 - 143 2.1e-17 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 199 - 297 9.1e-32 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0014394)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 437
AccB1I GGYRCC 1 cut(s) 742
AccBSI CCGCTC 1 cut(s) 43
AccIII TCCGGA 1 cut(s) 628
AclWI GGATC 2 cut(s) 532, 751
AcoI YGGCCR 2 cut(s) 422, 811
AfaI GTAC 3 cut(s) 126, 473, 896
AfiI CCNNNNNNNGG 7 cut(s) 84, 85, 241, 646, 761, 813, 820
AflIII ACRYGT 1 cut(s) 1050
AgeI ACCGGT 1 cut(s) 958
AgsI TTSAA 4 cut(s) 9, 52, 404, 1003
AhlI ACTAGT 1 cut(s) 1091
AjiI CACGTC 1 cut(s) 901
AjuI GAANNNNNNNTTGG 2 cut(s) 800, 832
AluBI AGCT 7 cut(s) 172, 247, 271, 315, 361, 418, 853
AluI AGCT 7 cut(s) 172, 247, 271, 315, 361, 418, 853
Alw21I GWGCWC 1 cut(s) 769
Alw26I GTCTC 1 cut(s) 399
Alw44I GTGCAC 1 cut(s) 765
AlwI GGATC 2 cut(s) 532, 751
Ama87I CYCGRG 1 cut(s) 639
Aor13HI TCCGGA 1 cut(s) 628
AoxI GGCC 6 cut(s) 153, 422, 490, 566, 709, 811
ApaLI GTGCAC 1 cut(s) 765
ApeKI GCWGC 2 cut(s) 271, 824
AsiGI ACCGGT 1 cut(s) 958
AspA2I CCTAGG 1 cut(s) 275
AspS9I GGNCC 8 cut(s) 100, 280, 439, 490, 538, 567, 631, 1036
AsuC2I CCSGG 1 cut(s) 762
AsuHPI GGTGA 6 cut(s) 196, 297, 743, 797, 851, 903
AvaI CYCGRG 1 cut(s) 639
AvaII GGWCC 6 cut(s) 100, 280, 439, 538, 631, 1036
AvrII CCTAGG 1 cut(s) 275
BaeGI GKGCMC 3 cut(s) 769, 995, 1012
BaeI ACNNNNGTAYC 2 cut(s) 967, 1000
BalI TGGCCA 1 cut(s) 424
BanI GGYRCC 1 cut(s) 742
BanII GRGCYC 1 cut(s) 337
BarI GAAGNNNNNNTAC 2 cut(s) 231, 263
Bbv12I GWGCWC 1 cut(s) 769
BbvI GCAGC 2 cut(s) 258, 811
BccI CCATC 4 cut(s) 65, 137, 722, 878
BceAI ACGGC 2 cut(s) 229, 826
BcgI CGANNNNNNTGC 4 cut(s) 281, 315, 853, 887
BciVI GTATCC 1 cut(s) 627
BcnI CCSGG 1 cut(s) 762
BcoDI GTCTC 1 cut(s) 399
BcuI ACTAGT 1 cut(s) 1091
BfaI CTAG 2 cut(s) 276, 1092
BfmI CTRYAG 3 cut(s) 290, 825, 883
BfuI GTATCC 1 cut(s) 627
BisI GCNGC 5 cut(s) 156, 272, 411, 709, 825
BlnI CCTAGG 1 cut(s) 275
BlpI GCTNAGC 1 cut(s) 414
BlsI GCNGC 5 cut(s) 157, 273, 412, 710, 826
Bme1390I CCNGG 1 cut(s) 762
Bme18I GGWCC 6 cut(s) 100, 280, 439, 538, 631, 1036
BmeT110I CYCGRG 1 cut(s) 639
BmgBI CACGTC 1 cut(s) 901
BmgT120I GGNCC 8 cut(s) 100, 280, 439, 490, 538, 567, 631, 1036
BmiI GGNNCC 4 cut(s) 281, 633, 657, 744
BmrFI CCNGG 1 cut(s) 762
BmsI GCATC 4 cut(s) 507, 783, 841, 873
Bpu1102I GCTNAGC 1 cut(s) 414
BpuMI CCSGG 1 cut(s) 762
BsaI GGTCTC 1 cut(s) 399
BsaJI CCNNGG 7 cut(s) 96, 211, 256, 275, 645, 760, 979
BsaWI WCCGGW 4 cut(s) 307, 619, 628, 958
BsaXI ACNNNNNCTCC 6 cut(s) 38, 68, 653, 683, 851, 881
Bsc4I CCNNNNNNNGG 7 cut(s) 84, 85, 241, 646, 761, 813, 820
Bse118I RCCGGY 4 cut(s) 564, 745, 813, 958
Bse3DI GCAATG 2 cut(s) 191, 463
BseAI TCCGGA 1 cut(s) 628
BseDI CCNNGG 7 cut(s) 96, 211, 256, 275, 645, 760, 979
BseGI GGATG 3 cut(s) 57, 733, 940
BseLI CCNNNNNNNGG 7 cut(s) 84, 85, 241, 646, 761, 813, 820
BseMI GCAATG 2 cut(s) 191, 463
BseMII CTCAG 2 cut(s) 171, 428
BseRI GAGGAG 2 cut(s) 82, 661
BseSI GKGCMC 3 cut(s) 769, 995, 1012
BseX3I CGGCCG 1 cut(s) 811
BseXI GCAGC 2 cut(s) 258, 811
Bsh1285I CGRYCG 2 cut(s) 814, 959
BshFI GGCC 6 cut(s) 155, 424, 492, 568, 711, 813
BshNI GGYRCC 1 cut(s) 742
BshTI ACCGGT 1 cut(s) 958
BsiEI CGRYCG 2 cut(s) 814, 959
BsiHKAI GWGCWC 1 cut(s) 769
BsiHKCI CYCGRG 1 cut(s) 639
BsiSI CCGG 8 cut(s) 308, 565, 620, 629, 746, 762, 814, 959
BsiWI CGTACG 1 cut(s) 894
BslFI GGGAC 3 cut(s) 23, 101, 293
BslI CCNNNNNNNGG 7 cut(s) 84, 85, 241, 646, 761, 813, 820
BsmAI GTCTC 1 cut(s) 399
BsmFI GGGAC 3 cut(s) 23, 101, 293
BsmI GAATGC 1 cut(s) 216
BsnI GGCC 6 cut(s) 155, 424, 492, 568, 711, 813
Bso31I GGTCTC 1 cut(s) 399
BsoBI CYCGRG 1 cut(s) 639
Bsp1286I GDGCHC 4 cut(s) 337, 769, 995, 1012
Bsp13I TCCGGA 1 cut(s) 628
Bsp143I GATC 8 cut(s) 111, 302, 387, 524, 756, 927, 937, 1015
Bsp1720I GCTNAGC 1 cut(s) 414
Bsp19I CCATGG 1 cut(s) 645
BspANI GGCC 6 cut(s) 155, 424, 492, 568, 711, 813
BspCNI CTCAG 2 cut(s) 172, 427
BspEI TCCGGA 1 cut(s) 628
BspLI GGNNCC 4 cut(s) 281, 633, 657, 744
BspMAI CTGCAG 2 cut(s) 294, 829
BspPI GGATC 2 cut(s) 532, 751
BspT107I GGYRCC 1 cut(s) 742
BspTNI GGTCTC 1 cut(s) 399
BsrBI CCGCTC 1 cut(s) 43
BsrDI GCAATG 2 cut(s) 191, 463
BsrFI RCCGGY 4 cut(s) 564, 745, 813, 958
BssAI RCCGGY 4 cut(s) 564, 745, 813, 958
BssECI CCNNGG 7 cut(s) 96, 211, 256, 275, 645, 760, 979
BssMI GATC 8 cut(s) 111, 302, 387, 524, 756, 927, 937, 1015
BssT1I CCWWGG 3 cut(s) 275, 645, 979
Bst4CI ACNGT 2 cut(s) 685, 894
Bst6I CTCTTC 1 cut(s) 462
BstC8I GCNNGC 5 cut(s) 174, 294, 333, 337, 713
BstDEI CTNAG 2 cut(s) 180, 414
BstDSI CCRYGG 4 cut(s) 96, 211, 256, 645
BstF5I GGATG 3 cut(s) 57, 733, 940
BstKTI GATC 8 cut(s) 114, 305, 390, 527, 759, 930, 940, 1018
BstMAI GTCTC 1 cut(s) 399
BstMBI GATC 8 cut(s) 111, 302, 387, 524, 756, 927, 937, 1015
BstMCI CGRYCG 2 cut(s) 814, 959
BstMWI GCNNNNNNNGC 3 cut(s) 169, 565, 705
BstNSI RCATGY 2 cut(s) 410, 1054
BstSCI CCNGG 1 cut(s) 760
BstSFI CTRYAG 3 cut(s) 290, 825, 883
BstSLI GKGCMC 3 cut(s) 769, 995, 1012
BstV1I GCAGC 2 cut(s) 258, 811
BstXI CCANNNNNNTGG 1 cut(s) 652
BstZI CGGCCG 1 cut(s) 811
BsuI GTATCC 1 cut(s) 627
BsuRI GGCC 6 cut(s) 155, 424, 492, 568, 711, 813
BtgI CCRYGG 4 cut(s) 96, 211, 256, 645
BtgZI GCGATG 1 cut(s) 856
BtrI CACGTC 1 cut(s) 901
BtsCI GGATG 3 cut(s) 57, 733, 940
BtsI GCAGTG 1 cut(s) 834
BtsIMutI CAGTG 3 cut(s) 690, 834, 853
Cac8I GCNNGC 5 cut(s) 174, 294, 333, 337, 713
Cfr10I RCCGGY 4 cut(s) 564, 745, 813, 958
Cfr13I GGNCC 8 cut(s) 100, 280, 439, 490, 538, 567, 631, 1036
Csp6I GTAC 3 cut(s) 125, 472, 895
CspAI ACCGGT 1 cut(s) 958
CspCI CAANNNNNGTGG 4 cut(s) 559, 582, 594, 617
CviAII CATG 4 cut(s) 407, 542, 646, 1051
CviQI GTAC 3 cut(s) 125, 472, 895
DdeI CTNAG 2 cut(s) 180, 414
DpnI GATC 8 cut(s) 113, 304, 389, 526, 758, 929, 939, 1017
DpnII GATC 8 cut(s) 111, 302, 387, 524, 756, 927, 937, 1015
DrdI GACNNNNNNGTC 1 cut(s) 437
DseDI GACNNNNNNGTC 1 cut(s) 437
EaeI YGGCCR 2 cut(s) 422, 811
EagI CGGCCG 1 cut(s) 811
Eam1104I CTCTTC 1 cut(s) 462
EarI CTCTTC 1 cut(s) 462
EciI GGCGGA 1 cut(s) 334
EclXI CGGCCG 1 cut(s) 811
Eco130I CCWWGG 3 cut(s) 275, 645, 979
Eco24I GRGCYC 1 cut(s) 337
Eco31I GGTCTC 1 cut(s) 399
Eco32I GATATC 1 cut(s) 909
Eco47I GGWCC 6 cut(s) 100, 280, 439, 538, 631, 1036
Eco52I CGGCCG 1 cut(s) 811
Eco88I CYCGRG 1 cut(s) 639
EcoO109I RGGNCCY 1 cut(s) 490
EcoRV GATATC 1 cut(s) 909
EcoT14I CCWWGG 3 cut(s) 275, 645, 979
EcoT38I GRGCYC 1 cut(s) 337
ErhI CCWWGG 3 cut(s) 275, 645, 979
FaeI CATG 4 cut(s) 410, 545, 649, 1054
FaqI GGGAC 3 cut(s) 23, 101, 293
FatI CATG 4 cut(s) 406, 541, 645, 1050
FauI CCCGC 2 cut(s) 48, 344
Fnu4HI GCNGC 5 cut(s) 156, 272, 411, 709, 825
FokI GGATG 3 cut(s) 44, 740, 927
FriOI GRGCYC 1 cut(s) 337
Fsp4HI GCNGC 5 cut(s) 156, 272, 411, 709, 825
FspBI CTAG 2 cut(s) 276, 1092
GluI GCNGC 5 cut(s) 156, 272, 411, 709, 825
HaeIII GGCC 6 cut(s) 155, 424, 492, 568, 711, 813
HapII CCGG 8 cut(s) 308, 565, 620, 629, 746, 762, 814, 959
Hin1II CATG 4 cut(s) 410, 545, 649, 1054
HinfI GANTC 3 cut(s) 74, 89, 668
HpaII CCGG 8 cut(s) 308, 565, 620, 629, 746, 762, 814, 959
HphI GGTGA 6 cut(s) 196, 297, 743, 797, 851, 903
Hpy166II GTNNAC 3 cut(s) 751, 767, 1056
Hpy188I TCNGA 2 cut(s) 181, 373
Hpy188III TCNNGA 3 cut(s) 382, 629, 1024
Hpy8I GTNNAC 3 cut(s) 751, 767, 1056
Hpy99I CGWCG 1 cut(s) 902
HpyAV CCTTC 3 cut(s) 145, 481, 964
HpyCH4III ACNGT 2 cut(s) 685, 894
HpyCH4IV ACGT 2 cut(s) 702, 900
HpyCH4V TGCA 8 cut(s) 292, 456, 604, 715, 767, 796, 827, 832
HpyF10VI GCNNNNNNNGC 3 cut(s) 169, 565, 705
HpyF3I CTNAG 2 cut(s) 180, 414
HpySE526I ACGT 2 cut(s) 702, 900
Hsp92II CATG 4 cut(s) 410, 545, 649, 1054
Kpn2I TCCGGA 1 cut(s) 628
Kzo9I GATC 8 cut(s) 111, 302, 387, 524, 756, 927, 937, 1015
LmnI GCTCC 2 cut(s) 244, 661
Lsp1109I GCAGC 2 cut(s) 258, 811
LweI GCATC 4 cut(s) 507, 783, 841, 873
MaeI CTAG 2 cut(s) 276, 1092
MaeII ACGT 2 cut(s) 702, 900
MaeIII GTNAC 5 cut(s) 202, 323, 857, 961, 1061
MalI GATC 8 cut(s) 113, 304, 389, 526, 758, 929, 939, 1017
MbiI CCGCTC 1 cut(s) 43
MboI GATC 8 cut(s) 111, 302, 387, 524, 756, 927, 937, 1015
MboII GAAGA 4 cut(s) 479, 493, 557, 916
MhlI GDGCHC 4 cut(s) 337, 769, 995, 1012
MlsI TGGCCA 1 cut(s) 424
MluCI AATT 2 cut(s) 503, 675
MluNI TGGCCA 1 cut(s) 424
MlyI GAGTC 3 cut(s) 68, 83, 662
MmeI TCCRAC 2 cut(s) 351, 831
MnlI CCTC 8 cut(s) 35, 103, 169, 187, 367, 682, 718, 954
Mox20I TGGCCA 1 cut(s) 424
MroI TCCGGA 1 cut(s) 628
MscI TGGCCA 1 cut(s) 424
MseI TTAA 2 cut(s) 317, 552
MslI CAYNNNNRTG 2 cut(s) 221, 546
Msp20I TGGCCA 1 cut(s) 424
MspI CCGG 8 cut(s) 308, 565, 620, 629, 746, 762, 814, 959
MspR9I CCNGG 1 cut(s) 762
Mva1269I GAATGC 1 cut(s) 216
MwoI GCNNNNNNNGC 3 cut(s) 169, 565, 705
NciI CCSGG 1 cut(s) 762
NcoI CCATGG 1 cut(s) 645
NdeII GATC 8 cut(s) 111, 302, 387, 524, 756, 927, 937, 1015
NlaIII CATG 4 cut(s) 410, 545, 649, 1054
NlaIV GGNNCC 4 cut(s) 281, 633, 657, 744
NmuCI GTSAC 3 cut(s) 202, 857, 1061
NspI RCATGY 2 cut(s) 410, 1054
PciI ACATGT 1 cut(s) 1050
PcsI WCGNNNNNNNCGW 1 cut(s) 42
PctI GAATGC 1 cut(s) 216
Pfl23II CGTACG 1 cut(s) 894
PinAI ACCGGT 1 cut(s) 958
PkrI GCNGC 5 cut(s) 157, 273, 412, 710, 826
PleI GAGTC 3 cut(s) 68, 83, 662
PpsI GAGTC 3 cut(s) 68, 83, 662
PscI ACATGT 1 cut(s) 1050
PspLI CGTACG 1 cut(s) 894
PspN4I GGNNCC 4 cut(s) 281, 633, 657, 744
PspPI GGNCC 8 cut(s) 100, 280, 439, 490, 538, 567, 631, 1036
PstI CTGCAG 2 cut(s) 294, 829
RsaI GTAC 3 cut(s) 126, 473, 896
RsaNI GTAC 3 cut(s) 125, 472, 895
RseI CAYNNNNRTG 2 cut(s) 221, 546
SaqAI TTAA 2 cut(s) 317, 552
SatI GCNGC 5 cut(s) 156, 272, 411, 709, 825
Sau3AI GATC 8 cut(s) 111, 302, 387, 524, 756, 927, 937, 1015
Sau96I GGNCC 8 cut(s) 100, 280, 439, 490, 538, 567, 631, 1036
SchI GAGTC 3 cut(s) 68, 83, 662
ScrFI CCNGG 1 cut(s) 762
SduI GDGCHC 4 cut(s) 337, 769, 995, 1012
SfaNI GCATC 4 cut(s) 507, 783, 841, 873
SfcI CTRYAG 3 cut(s) 290, 825, 883
SinI GGWCC 6 cut(s) 100, 280, 439, 538, 631, 1036
SmiMI CAYNNNNRTG 2 cut(s) 221, 546
SpeI ACTAGT 1 cut(s) 1091
Sse9I AATT 2 cut(s) 503, 675
SspMI CTAG 2 cut(s) 276, 1092
StyD4I CCNGG 1 cut(s) 760
StyI CCWWGG 3 cut(s) 275, 645, 979
TaaI ACNGT 2 cut(s) 685, 894
TaiI ACGT 2 cut(s) 705, 903
TaqI TCGA 5 cut(s) 45, 144, 301, 930, 955
TaqII GACCGA 1 cut(s) 427
TasI AATT 2 cut(s) 503, 675
TauI GCSGC 3 cut(s) 158, 413, 711
Tru1I TTAA 2 cut(s) 317, 552
Tru9I TTAA 2 cut(s) 317, 552
TscAI CASTG 3 cut(s) 690, 834, 853
TseFI GTSAC 3 cut(s) 202, 857, 1061
TseI GCWGC 2 cut(s) 271, 824
Tsp45I GTSAC 3 cut(s) 202, 857, 1061
TspDTI ATGAA 4 cut(s) 239, 500, 558, 935
TspGWI ACGGA 2 cut(s) 113, 1049
TspRI CASTG 3 cut(s) 690, 834, 853
VneI GTGCAC 1 cut(s) 765
VpaK11BI GGWCC 6 cut(s) 100, 280, 439, 538, 631, 1036
XceI RCATGY 2 cut(s) 410, 1054
XmaJI CCTAGG 1 cut(s) 275
XspI CTAG 2 cut(s) 276, 1092
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.