Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0009958

Physical Location & Seq

Genomic Coordinates Reverse (-)

15603952 .. 15605973

Gene Structure 2022 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1196600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1764 bp

ATGTATGCGAATTTAGCAAAAGGCCAAGCATTTCCCTTGGCAATTAGGGTTTGTTCGTGGCCCAAATCGTTTCACACCTCAAAGTTTCAATCTTTACAAATCGGGTCTCGTCCAAAACCCCCAATAAACCTAAGGTCGATCAAACTCACAAAACCAACATGCGGGTTTGGTGAAAAAAATTGTGGGTTGTCACATTTGGTTCGTTTTTCAACCGGTTCGTATTGTGAGATTCCGGAAACTGGGGTTGTTACAAAACCCAGAAGTGTTTCTGGTGGGTTTAGGATTAGAAGTGGTACACAGAGTTGGTGTTTTGTAAGAGGTAGAGGTTTTTCGAGTTGCTCGGGTCAGGGAGTTGATGGAGGGAGTGGTGTGGGTAGAGCTGGGAAAAGACTGCCATGGTTGCCGGCAGCAAAGGCTAGGGGAGCAAAAGGGTTGGAGAAAGGAACTACGGCGAAGACATCTGTTTCGTCTTGGGAGGAATCTGCTAAGAGGTTAGAGGAAGTTAGTGATAATGGTTCTTGGGGAGAAGCGGCAAAGAGATTAGATGGAGATAGTAGCGAGTCGTCTTGGGGAAAATCGGGAAATAGGTTAGACGAAGAAACAAATTCGAAAACTGGCCGTGCTTCTTGGGATGTGTCAAGAAAAAATTACGTTCGGAAAAGTGGTCCATTGCAGTATGGGAGCAGAGAAGGTAGAACTGAAAGGGGAACTTGGGTAAAGGATCGTCAGAGTGATTACCGTGGGAGGGACAAAAGATTGGACGAACCCAATACAGCAAAAAGTTATGTTAGGAAAAGTGGTACATCGGAGCAATGGGGTAGAGAAAGTAGGACTGGAAGGGGAAGTGTGGTAAAGGATCGTCAGAGTGATTACCGAGGGAGGGACAGAAGATTTGAGAAAGCTGATACAGAAGGAGATGTAGAAGAAGAAGGAGACGAACAAGAAGAAGAAATGGAGGCTGTTGATGATCCAAGGAAGAAGAAGGACAAGAAGGGCTTTGAGAGAATTTTAATGATGGCTGACAAGATTGGGTTAAACGTAAAGGATGTGTCCAAGCATGATCTTAATATGGCTACTGATAATCGACCTCATCAGGGTCTGGTTCTAGATGCTTCTCCGTTGGAGATGGTGAAAATTAACGAATTGGACCCCGTTTCAGTTGAGGAAGATAAGGGCTCTCTTTGGGTTGCTTTGGATGAGGTTACGGATCCTCAGAATGTGGGAGCAATCATCAGGTCTGCTTATTTCTTTGGAGCTTCTGGGGTGGTGTTATGTGCCAAGAATTCAGCTCCACTGAGTGGAGTGGTGAGCAAAGCAAGTGCAGGCTCACTTGAGTTAATGGAGTTGAGATACTGCAAAAATATGATGCAGTTCCTAACATCCTCAGCCGAAAATGGTTGGCGAGTTCTTGGAGGTTCTGTTTCTGCCAAGGCTATACCTTTGAACGAGGTTGCACCTAGTGTACCAACAATTCTTGTTCTGGGAAGTGAGGGCACTGGGTTGAGACCTTTGGTGGAAAGATCTTGCACTGATTTGATTAGAATCCCAGGGAATATTCCCGTGGAAATTACTGCTGGTGGATTTGATGATACTGAAACCGTGAAAGGGAATCATGTGTGCTCAGCTGAAGAGTTTCGATCATTTTTGGCCGTGGAGAGCTTAAATGTCAGCGTTGCAGCTGGTGTGCTGCTTCATCACTTGACGGGAAACAATAACAATGAGGATGTCCATGCGGTTAATCAGCAGACTGACGAACTTGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000154 GO:0000451 GO:0000453 GO:0001510 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008168 GO:0008171 GO:0008173 GO:0008649 GO:0008757 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0016435 GO:0016740 GO:0016741 GO:0022613 GO:0031167 GO:0032259 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0070039 GO:0071704 GO:0071840 GO:0090304 GO:0140098 GO:0140102 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SpoU_methylase SpoU_sub_bind

Protein Analysis

588

Amino Acids

64.02

Weight (kDa)

8.38

Isoelectric Point (pI)

36.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SpoU_methylase	PF00588	394 - 518	7e-26	SpoU rRNA Methylase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009958)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G19870
fragaria_vesca	FvH4_1g06150 FvH4_1g06190
malus_domestica	MD02G1065700.v1.1 MD15G1196600.v1.1
prunus_persica	Prupe.7G219800_v2.0.a1 Prupe.7G219800_v2.0.a1
pyrus_communis	pycom02g05180 pycom02g05220 pycom15g17570
rosa_chinensis	RchiOBHm_Chr2g0091911
rosa_laevigata	RLG00000016260
rosa_multiflora	Rmu_sc0031557.1_g000002 Rmu_sc0031558.1_g000001
rosa_roxburghii	Rroxscaffold_2G00149620
rosa_rugosa	Rorug02G0021600
rosa_samantha	Rh2AG067200 Rh2BG066400 Rh2CG067700 Rh2DG066300
rosa_wichuraiana	Rw2G005380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	1298
AccIII	TCCGGA	1 cut(s)	232
AciI	CCGC	3 cut(s)	162, 530, 1733
AclWI	GGATC	5 cut(s)	729, 864, 962, 1202, 1215
AcoI	YGGCCR	2 cut(s)	616, 1647
AcsI	RAATTY	4 cut(s)	10, 604, 1005, 1282
AcuI	CTGAAG	1 cut(s)	1647
AdeI	CACNNNGTG	2 cut(s)	1298, 1460
AfaI	GTAC	3 cut(s)	295, 802, 1464
AfiI	CCNNNNNNNGG	7 cut(s)	161, 239, 745, 880, 1094, 1298, 1605
AgeI	ACCGGT	1 cut(s)	212
AgsI	TTSAA	3 cut(s)	89, 210, 1444
AjnI	CCWGG	1 cut(s)	1546
AluBI	AGCT	7 cut(s)	380, 902, 1256, 1289, 1625, 1659, 1679
AluI	AGCT	7 cut(s)	380, 902, 1256, 1289, 1625, 1659, 1679
Alw21I	GWGCWC	1 cut(s)	1622
Alw26I	GTCTC	3 cut(s)	111, 927, 1498
AlwI	GGATC	5 cut(s)	729, 864, 962, 1202, 1215
AlwNI	CAGNNNCTG	1 cut(s)	1099
Ama87I	CYCGRG	1 cut(s)	340
Aor13HI	TCCGGA	1 cut(s)	232
AoxI	GGCC	4 cut(s)	22, 59, 616, 1647
ApeKI	GCWGC	3 cut(s)	407, 1676, 1687
ApoI	RAATTY	4 cut(s)	10, 604, 1005, 1282
ArsI	GACNNNNNNTTYG	4 cut(s)	448, 480, 875, 907
AsiGI	ACCGGT	1 cut(s)	212
Asp700I	GAANNNNTTC	2 cut(s)	265, 1632
AspS9I	GGNCC	3 cut(s)	60, 665, 1147
AsuHPI	GGTGA	3 cut(s)	182, 1141, 1318
AsuII	TTCGAA	1 cut(s)	608
AvaI	CYCGRG	1 cut(s)	340
AvaII	GGWCC	2 cut(s)	665, 1147
AxyI	CCTNAGG	1 cut(s)	131
BaeGI	GKGCMC	1 cut(s)	1496
BamHI	GGATCC	1 cut(s)	1207
BanII	GRGCYC	1 cut(s)	1178
BbsI	GAAGAC	1 cut(s)	461
Bbv12I	GWGCWC	1 cut(s)	1622
BbvCI	CCTCAGC	1 cut(s)	1384
BbvI	GCAGC	3 cut(s)	419, 1674, 1688
BccI	CCATC	4 cut(s)	350, 539, 1009, 1120
BceAI	ACGGC	3 cut(s)	465, 603, 1634
BciT130I	CCWGG	1 cut(s)	1548
BcoDI	GTCTC	3 cut(s)	111, 927, 1498
BfaI	CTAG	3 cut(s)	417, 1106, 1458
BglII	AGATCT	1 cut(s)	1520
BisI	GCNGC	4 cut(s)	408, 531, 1677, 1688
BlpI	GCTNAGC	1 cut(s)	1621
BlsI	GCNGC	4 cut(s)	409, 532, 1678, 1689
Bme1390I	CCNGG	1 cut(s)	1548
Bme18I	GGWCC	2 cut(s)	665, 1147
BmeT110I	CYCGRG	1 cut(s)	340
BmgT120I	GGNCC	3 cut(s)	60, 665, 1147
BmiI	GGNNCC	2 cut(s)	1149, 1209
BmrFI	CCNGG	1 cut(s)	1548
BmrI	ACTGGG	2 cut(s)	249, 1506
BmsI	GCATC	2 cut(s)	1099, 1356
BmuI	ACTGGG	2 cut(s)	249, 1506
BpiI	GAAGAC	1 cut(s)	461
Bpu10I	CCTNAGC	1 cut(s)	1384
Bpu1102I	GCTNAGC	1 cut(s)	1621
Bpu14I	TTCGAA	1 cut(s)	608
BpuEI	CTTGAG	1 cut(s)	1352
BsaBI	GATNNNNATC	1 cut(s)	1541
BsaI	GGTCTC	2 cut(s)	111, 1498
BsaWI	WCCGGW	2 cut(s)	212, 232
BsaXI	ACNNNNNCTCC	2 cut(s)	1404, 1434
Bsc4I	CCNNNNNNNGG	7 cut(s)	161, 239, 745, 880, 1094, 1298, 1605
Bse118I	RCCGGY	2 cut(s)	212, 403
Bse1I	ACTGG	4 cut(s)	244, 619, 838, 1501
Bse21I	CCTNAGG	1 cut(s)	131
Bse3DI	GCAATG	2 cut(s)	668, 818
Bse8I	GATNNNNATC	1 cut(s)	1541
BseAI	TCCGGA	1 cut(s)	232
BseBI	CCWGG	1 cut(s)	1548
BseGI	GGATG	5 cut(s)	637, 1051, 1201, 1379, 1729
BseJI	GATNNNNATC	1 cut(s)	1541
BseLI	CCNNNNNNNGG	7 cut(s)	161, 239, 745, 880, 1094, 1298, 1605
BseMI	GCAATG	2 cut(s)	668, 818
BseMII	CTCAG	4 cut(s)	1226, 1286, 1398, 1635
BseNI	ACTGG	4 cut(s)	244, 619, 838, 1501
BseSI	GKGCMC	1 cut(s)	1496
BseXI	GCAGC	3 cut(s)	419, 1674, 1688
BseYI	CCCAGC	1 cut(s)	380
BsgI	GTGCAG	1 cut(s)	1341
BshFI	GGCC	4 cut(s)	24, 61, 618, 1649
BshTI	ACCGGT	1 cut(s)	212
BsiHKAI	GWGCWC	1 cut(s)	1622
BsiHKCI	CYCGRG	1 cut(s)	340
BsiSI	CCGG	3 cut(s)	213, 233, 404
BslFI	GGGAC	2 cut(s)	761, 896
BslI	CCNNNNNNNGG	7 cut(s)	161, 239, 745, 880, 1094, 1298, 1605
BsmAI	GTCTC	3 cut(s)	111, 927, 1498
BsmBI	CGTCTC	1 cut(s)	927
BsmFI	GGGAC	2 cut(s)	761, 896
BsnI	GGCC	4 cut(s)	24, 61, 618, 1649
Bso31I	GGTCTC	2 cut(s)	111, 1498
BsoBI	CYCGRG	1 cut(s)	340
Bsp119I	TTCGAA	1 cut(s)	608
Bsp1286I	GDGCHC	3 cut(s)	1178, 1496, 1622
Bsp13I	TCCGGA	1 cut(s)	232
Bsp143I	GATC	8 cut(s)	138, 721, 856, 967, 1060, 1207, 1520, 1637
Bsp1720I	GCTNAGC	1 cut(s)	1621
Bsp19I	CCATGG	1 cut(s)	395
BspACI	CCGC	3 cut(s)	162, 530, 1733
BspANI	GGCC	4 cut(s)	24, 61, 618, 1649
BspCNI	CTCAG	4 cut(s)	1225, 1287, 1397, 1634
BspEI	TCCGGA	1 cut(s)	232
BspLI	GGNNCC	2 cut(s)	1149, 1209
BspPI	GGATC	5 cut(s)	729, 864, 962, 1202, 1215
BspT104I	TTCGAA	1 cut(s)	608
BspTNI	GGTCTC	2 cut(s)	111, 1498
BsrDI	GCAATG	2 cut(s)	668, 818
BsrFI	RCCGGY	2 cut(s)	212, 403
BsrI	ACTGG	4 cut(s)	244, 619, 838, 1501
BssAI	RCCGGY	2 cut(s)	212, 403
BssMI	GATC	8 cut(s)	138, 721, 856, 967, 1060, 1207, 1520, 1637
BssT1I	CCWWGG	4 cut(s)	36, 395, 971, 1428
Bst2UI	CCWGG	1 cut(s)	1548
Bst4CI	ACNGT	2 cut(s)	740, 1600
Bst6I	CTCTTC	1 cut(s)	1623
BstBI	TTCGAA	1 cut(s)	608
BstC8I	GCNNGC	2 cut(s)	405, 1324
BstDEI	CTNAG	6 cut(s)	131, 486, 1212, 1295, 1384, 1621
BstDSI	CCRYGG	4 cut(s)	395, 739, 1560, 1650
BstF5I	GGATG	5 cut(s)	637, 1051, 1201, 1379, 1729
BstKTI	GATC	8 cut(s)	141, 724, 859, 970, 1063, 1210, 1523, 1640
BstMAI	GTCTC	3 cut(s)	111, 927, 1498
BstMBI	GATC	8 cut(s)	138, 721, 856, 967, 1060, 1207, 1520, 1637
BstMWI	GCNNNNNNNGC	4 cut(s)	14, 400, 413, 422
BstNI	CCWGG	1 cut(s)	1548
BstNSI	RCATGY	1 cut(s)	162
BstSCI	CCNGG	1 cut(s)	1546
BstSLI	GKGCMC	1 cut(s)	1496
BstV1I	GCAGC	3 cut(s)	419, 1674, 1688
BstV2I	GAAGAC	1 cut(s)	461
BstX2I	RGATCY	2 cut(s)	1207, 1520
BstYI	RGATCY	2 cut(s)	1207, 1520
Bsu36I	CCTNAGG	1 cut(s)	131
BsuRI	GGCC	4 cut(s)	24, 61, 618, 1649
BtgI	CCRYGG	4 cut(s)	395, 739, 1560, 1650
BtsCI	GGATG	5 cut(s)	637, 1051, 1201, 1379, 1729
BtsIMutI	CAGTG	3 cut(s)	1292, 1494, 1527
Cac8I	GCNNGC	2 cut(s)	405, 1324
CaiI	CAGNNNCTG	1 cut(s)	1099
Cfr10I	RCCGGY	2 cut(s)	212, 403
Cfr13I	GGNCC	3 cut(s)	60, 665, 1147
Csp6I	GTAC	3 cut(s)	294, 801, 1463
CspAI	ACCGGT	1 cut(s)	212
CviAII	CATG	5 cut(s)	159, 396, 1058, 1613, 1730
CviQI	GTAC	3 cut(s)	294, 801, 1463
DdeI	CTNAG	6 cut(s)	131, 486, 1212, 1295, 1384, 1621
DpnI	GATC	8 cut(s)	140, 723, 858, 969, 1062, 1209, 1522, 1639
DpnII	GATC	8 cut(s)	138, 721, 856, 967, 1060, 1207, 1520, 1637
DraIII	CACNNNGTG	2 cut(s)	1298, 1460
EaeI	YGGCCR	2 cut(s)	616, 1647
Eam1104I	CTCTTC	1 cut(s)	1623
EarI	CTCTTC	1 cut(s)	1623
Eco130I	CCWWGG	4 cut(s)	36, 395, 971, 1428
Eco24I	GRGCYC	1 cut(s)	1178
Eco31I	GGTCTC	2 cut(s)	111, 1498
Eco47I	GGWCC	2 cut(s)	665, 1147
Eco57I	CTGAAG	1 cut(s)	1647
Eco81I	CCTNAGG	1 cut(s)	131
Eco88I	CYCGRG	1 cut(s)	340
EcoRI	GAATTC	1 cut(s)	1282
EcoRII	CCWGG	1 cut(s)	1546
EcoT14I	CCWWGG	4 cut(s)	36, 395, 971, 1428
EcoT38I	GRGCYC	1 cut(s)	1178
ErhI	CCWWGG	4 cut(s)	36, 395, 971, 1428
Esp3I	CGTCTC	1 cut(s)	927
FaeI	CATG	5 cut(s)	162, 399, 1061, 1616, 1733
FalI	AAGNNNNNCTT	4 cut(s)	694, 726, 980, 1012
FaqI	GGGAC	2 cut(s)	761, 896
FatI	CATG	5 cut(s)	158, 395, 1057, 1612, 1729
FauI	CCCGC	1 cut(s)	155
Fnu4HI	GCNGC	4 cut(s)	408, 531, 1677, 1688
FokI	GGATG	5 cut(s)	644, 1058, 1208, 1366, 1736
FriOI	GRGCYC	1 cut(s)	1178
Fsp4HI	GCNGC	4 cut(s)	408, 531, 1677, 1688
FspBI	CTAG	3 cut(s)	417, 1106, 1458
GluI	GCNGC	4 cut(s)	408, 531, 1677, 1688
GsaI	CCCAGC	1 cut(s)	384
HaeIII	GGCC	4 cut(s)	24, 61, 618, 1649
HapII	CCGG	3 cut(s)	213, 233, 404
Hin1II	CATG	5 cut(s)	162, 399, 1061, 1616, 1733
HinfI	GANTC	5 cut(s)	229, 479, 560, 1542, 1609
HpaII	CCGG	3 cut(s)	213, 233, 404
HphI	GGTGA	3 cut(s)	182, 1141, 1318
Hpy166II	GTNNAC	2 cut(s)	296, 1463
Hpy188I	TCNGA	5 cut(s)	657, 729, 808, 864, 1215
Hpy188III	TCNNGA	4 cut(s)	233, 579, 639, 1106
Hpy8I	GTNNAC	2 cut(s)	296, 1463
HpyAV	CCTTC	6 cut(s)	683, 831, 905, 923, 976, 985
HpyCH4III	ACNGT	2 cut(s)	740, 1600
HpyCH4IV	ACGT	2 cut(s)	651, 1038
HpyCH4V	TGCA	7 cut(s)	673, 1322, 1356, 1369, 1454, 1527, 1676
HpyF10VI	GCNNNNNNNGC	4 cut(s)	14, 400, 413, 422
HpyF3I	CTNAG	6 cut(s)	131, 486, 1212, 1295, 1384, 1621
HpySE526I	ACGT	2 cut(s)	651, 1038
Hsp92II	CATG	5 cut(s)	162, 399, 1061, 1616, 1733
Kpn2I	TCCGGA	1 cut(s)	232
KroI	GCCGGC	1 cut(s)	403
KroNI	GCCGGC	1 cut(s)	405
Kzo9I	GATC	8 cut(s)	138, 721, 856, 967, 1060, 1207, 1520, 1637
LmnI	GCTCC	6 cut(s)	422, 681, 808, 1223, 1253, 1294
Lsp1109I	GCAGC	3 cut(s)	419, 1674, 1688
LweI	GCATC	2 cut(s)	1099, 1356
MaeI	CTAG	3 cut(s)	417, 1106, 1458
MaeII	ACGT	2 cut(s)	651, 1038
MaeIII	GTNAC	3 cut(s)	189, 247, 1201
MalI	GATC	8 cut(s)	140, 723, 858, 969, 1062, 1209, 1522, 1639
MboI	GATC	8 cut(s)	138, 721, 856, 967, 1060, 1207, 1520, 1637
MflI	RGATCY	2 cut(s)	1207, 1520
MhlI	GDGCHC	3 cut(s)	1178, 1496, 1622
MlyI	GAGTC	1 cut(s)	569
MmeI	TCCRAC	2 cut(s)	414, 1101
MroI	TCCGGA	1 cut(s)	232
MroNI	GCCGGC	1 cut(s)	403
MroXI	GAANNNNTTC	2 cut(s)	265, 1632
MseI	TTAA	7 cut(s)	1010, 1034, 1065, 1137, 1337, 1661, 1737
MspA1I	CMGCKG	2 cut(s)	1625, 1679
MspI	CCGG	3 cut(s)	213, 233, 404
MspR9I	CCNGG	1 cut(s)	1548
MvaI	CCWGG	1 cut(s)	1548
MwoI	GCNNNNNNNGC	4 cut(s)	14, 400, 413, 422
NaeI	GCCGGC	1 cut(s)	405
NcoI	CCATGG	1 cut(s)	395
NdeII	GATC	8 cut(s)	138, 721, 856, 967, 1060, 1207, 1520, 1637
NgoMIV	GCCGGC	1 cut(s)	403
NlaIII	CATG	5 cut(s)	162, 399, 1061, 1616, 1733
NlaIV	GGNNCC	2 cut(s)	1149, 1209
NmuCI	GTSAC	1 cut(s)	189
NspI	RCATGY	1 cut(s)	162
NspV	TTCGAA	1 cut(s)	608
PasI	CCCWGGG	1 cut(s)	1547
PdiI	GCCGGC	1 cut(s)	405
PdmI	GAANNNNTTC	2 cut(s)	265, 1632
PfeI	GAWTC	4 cut(s)	229, 479, 1542, 1609
PflMI	CCANNNNNTGG	1 cut(s)	1298
PinAI	ACCGGT	1 cut(s)	212
PkrI	GCNGC	4 cut(s)	409, 532, 1678, 1689
PleI	GAGTC	1 cut(s)	568
PpsI	GAGTC	1 cut(s)	568
Psp6I	CCWGG	1 cut(s)	1546
PspFI	CCCAGC	1 cut(s)	380
PspGI	CCWGG	1 cut(s)	1546
PspN4I	GGNNCC	2 cut(s)	1149, 1209
PspPI	GGNCC	3 cut(s)	60, 665, 1147
PstNI	CAGNNNCTG	1 cut(s)	1099
PsuI	RGATCY	2 cut(s)	1207, 1520
PvuII	CAGCTG	2 cut(s)	1625, 1679
RsaI	GTAC	3 cut(s)	295, 802, 1464
RsaNI	GTAC	3 cut(s)	294, 801, 1463
SaqAI	TTAA	7 cut(s)	1010, 1034, 1065, 1137, 1337, 1661, 1737
SatI	GCNGC	4 cut(s)	408, 531, 1677, 1688
Sau3AI	GATC	8 cut(s)	138, 721, 856, 967, 1060, 1207, 1520, 1637
Sau96I	GGNCC	3 cut(s)	60, 665, 1147
SchI	GAGTC	1 cut(s)	569
ScrFI	CCNGG	1 cut(s)	1548
SduI	GDGCHC	3 cut(s)	1178, 1496, 1622
SfaNI	GCATC	2 cut(s)	1099, 1356
SfuI	TTCGAA	1 cut(s)	608
SinI	GGWCC	2 cut(s)	665, 1147
SmlI	CTYRAG	1 cut(s)	1331
SmoI	CTYRAG	1 cut(s)	1331
SsiI	CCGC	3 cut(s)	162, 530, 1733
SspI	AATATT	1 cut(s)	1555
SspMI	CTAG	3 cut(s)	417, 1106, 1458
StyD4I	CCNGG	1 cut(s)	1546
StyI	CCWWGG	4 cut(s)	36, 395, 971, 1428
TaaI	ACNGT	2 cut(s)	740, 1600
TaiI	ACGT	2 cut(s)	654, 1041
TaqI	TCGA	5 cut(s)	137, 332, 608, 1084, 1636
TauI	GCSGC	1 cut(s)	533
TfiI	GAWTC	4 cut(s)	229, 479, 1542, 1609
Tru1I	TTAA	7 cut(s)	1010, 1034, 1065, 1137, 1337, 1661, 1737
Tru9I	TTAA	7 cut(s)	1010, 1034, 1065, 1137, 1337, 1661, 1737
TscAI	CASTG	3 cut(s)	1299, 1501, 1534
TseFI	GTSAC	1 cut(s)	189
TseI	GCWGC	3 cut(s)	407, 1676, 1687
Tsp45I	GTSAC	1 cut(s)	189
TspDTI	ATGAA	1 cut(s)	1682
TspGWI	ACGGA	2 cut(s)	1107, 1220
TspRI	CASTG	3 cut(s)	1299, 1501, 1534
Van91I	CCANNNNNTGG	1 cut(s)	1298
VpaK11BI	GGWCC	2 cut(s)	665, 1147
XapI	RAATTY	4 cut(s)	10, 604, 1005, 1282
XbaI	TCTAGA	1 cut(s)	1105
XceI	RCATGY	1 cut(s)	162
XmnI	GAANNNNTTC	2 cut(s)	265, 1632
XspI	CTAG	3 cut(s)	417, 1106, 1458

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.