Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0009958

Physical Location & Seq

Genomic Coordinates Reverse (-)

12431025 .. 12433046

Gene Structure 2022 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom15g17570.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2022 bp

ATGTATGCGAATTTAGCAAAAGGCCAAGCATTTCCCTTGGCAATTAGGGTTTGTTCGAGGCCCGAATCTTTTCACACCTCAAAGTTTCAATCTTTACAAATCGGGTCTCATCCAAAACCCCCAATAAACCTTAGGTCGATCAAACTCACAAAACCAACATGCGGGTTTGGTGAAAAAAATTGTGGGTTGTCACATTTGGTTCGTTTTTCAACCGGTTCTTATTGTGAGTTTCTGGAAACTGGGGTTGTTGCAAAACCCAGAAGTGTTTCTGGTGGGTTTAGGATTACAAGTGGTGCACAGAGTTGGTGTTTTGTAAGAGGTAGAGGTTTTTCGAGTTGCTCGGGTCAGGGAGTTGATGGAGGGAGTGGTGTGGGTAGAGCTAGGAAAAGACTCCCGTGGTTGCCGGCAGCAAAAGCTAGGGGAGCAAAAGGGTTGGAGAAGGGAACTACGGCGAAGACATCTGTTTCGTCTTGGGAGCAATCTGCTAAGAGGTTAGAGGAAGTTAGTGATAATGGTTCTTGGGGAGAAGCGGCAAAGAGATTAGATGGAGATAGTAGTGAGTCGTCTTGGGGAAAATCGGGAAATAGGTTAGAGGAAGAAACAAATTCGAAAACTGGCCATGCTTCTTGGGATGTGTCAAGAAAAAATTACGTTAGGAAAAGTGGTCCACTGCAGTATGGGAGTAGAGAAGGTAGAACTGAAAGGGGAACTTCGGTAAAGGATCGTCAGAGTGATCACCGTGGGAGGGACAAAAGATTGGACGAAGCCGATACAGCAAAAAGTTATGTTAGGAAAAGTGGTACATTGGAGCAATGGGGTAGAGAAAGTAGAACTGGAAGGGGAAGTGTGGTAAAGGATCATCAGAGTGATTACCGAGGGAGGGACAGAAGATTTGAGAAAGCTGATACAGAAGGAGATGTTGAAGAAGAAGGAGATGAACAAGAAGAAGAAATGGAGGCTGTTGATGATCCAAGGTGGGATCGTATTCAAAACAAGTTCAGTGGAATGGAAGATGTAAAACCTGGACGTGAGAGACCTGAGTTTCGAAGGTGGAATAGGCAGGAAGATTGGGGTAAGAAGACATGGAAAGAGGCTACTGAATCGTCCGTGCCTAGGATGATTGGCCAAAGTGTTTATGGCGTTGGTCCAGTTTTGGCTGCTTTGTCAGCTGGAAGAAGAGAATTTTATGCATTGTATGTTCAAGAAGGGATGGATTTGAGCAAAAATAATAGGAAGAAGAAGGACAAGAAGGGCTTTGAAAGAATTTTAATGATGGCTGACAAGATTGGGTTAAACGTAAAGGATGTGTCCAAGCATGATCTTAATATGGCTACTGATAATCGACCTCATCAGGGTCTGGTTCTAGATGCTTCTCCGTTGGAGATGGTGAAAATTAACGAATTGGACCCCGTTTCGGTTGAGGAAGGTAAGGGCTCTCTTTGGGTTGCTTTGGATGAGGTTACGGATCCTCAGAATGTGGGAGCAATCATCAGGTCTGCTTACTTCTTTGGAGCTTCTGGGGTGGTGTTATGTGCCAAGAATTCAGCTCCACTGAGTGGTGTTGTGAGCAAAGCAAGTGCAGGCTCACTTGAGTTGATGGAGTTGAGATACTGCAAGAATATGATGCAGTTCCTAACATCCTCAACCGAAAATGGTTGGCGAGTTCTTGGAGGTTCTGTTTCTGCCAAGGCTATACCTTTGAACAAGGTTGCACCTAGTGTACCAACAATTCTTGTTCTGGGAAGTGAGGGCACTGGGTTGAGACCTTTGGTGGAAAGATCTTGCACTGATTTGATTAGAATCCCGGGGAATATTCCCATGGAAATTACTGCTGGTGGAGTTGATGATACTGAAACCGTGGAAGGGAATCATGCGTGCTCAGCTGAAGAGATCCGATCATTTTTGGCCGTGGAGAGCTTAAATGTCAGCGTTGCAGCTGGTGTGTTGCTTCATCACTTAACAGGAAACAATAACGATGAGGATGTCGATGCAGTTAATCAGCAGACTGACGAACTTGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000154 GO:0000451 GO:0000453 GO:0001510 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008168 GO:0008171 GO:0008173 GO:0008649 GO:0008757 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0016435 GO:0016740 GO:0016741 GO:0022613 GO:0031167 GO:0032259 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0070039 GO:0071704 GO:0071840 GO:0090304 GO:0140098 GO:0140102 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SpoU_methylase SpoU_sub_bind

Protein Analysis

674

Amino Acids

73.79

Weight (kDa)

8.18

Isoelectric Point (pI)

41.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SpoU_sub_bind	PF08032	378 - 462	6.4e-10	RNA 2'-O ribose methyltransferase substrate binding
SpoU_methylase	PF00588	480 - 604	9.2e-26	SpoU rRNA Methylase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009958)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G19870
fragaria_vesca	FvH4_1g06150 FvH4_1g06190
malus_domestica	MD02G1065700.v1.1 MD15G1196600.v1.1
prunus_persica	Prupe.7G219800_v2.0.a1 Prupe.7G219800_v2.0.a1
pyrus_communis	pycom02g05180 pycom02g05220 pycom15g17570
rosa_chinensis	RchiOBHm_Chr2g0091911
rosa_laevigata	RLG00000016260
rosa_multiflora	Rmu_sc0031557.1_g000002 Rmu_sc0031558.1_g000001
rosa_roxburghii	Rroxscaffold_2G00149620
rosa_rugosa	Rorug02G0021600
rosa_samantha	Rh2AG067200 Rh2BG066400 Rh2CG067700 Rh2DG066300
rosa_wichuraiana	Rw2G005380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	1556
AciI	CCGC	2 cut(s)	162, 530
AclWI	GGATC	7 cut(s)	729, 864, 962, 987, 1460, 1473, 1885
AcoI	YGGCCR	3 cut(s)	616, 1123, 1905
AcsI	RAATTY	5 cut(s)	10, 604, 1181, 1263, 1540
AcuI	CTGAAG	1 cut(s)	1905
AdeI	CACNNNGTG	2 cut(s)	1556, 1718
AfaI	GTAC	2 cut(s)	802, 1722
AfiI	CCNNNNNNNGG	8 cut(s)	161, 745, 880, 1113, 1352, 1414, 1556, 1863
AgeI	ACCGGT	1 cut(s)	212
AgsI	TTSAA	7 cut(s)	89, 210, 923, 989, 1202, 1259, 1702
AjiI	CACGTC	1 cut(s)	1028
AjnI	CCWGG	1 cut(s)	1021
AluBI	AGCT	9 cut(s)	380, 416, 902, 1169, 1514, 1547, 1883, 1917, 1937
AluI	AGCT	9 cut(s)	380, 416, 902, 1169, 1514, 1547, 1883, 1917, 1937
Alw21I	GWGCWC	2 cut(s)	298, 1880
Alw26I	GTCTC	3 cut(s)	111, 1027, 1756
Alw44I	GTGCAC	1 cut(s)	294
AlwI	GGATC	7 cut(s)	729, 864, 962, 987, 1460, 1473, 1885
AlwNI	CAGNNNCTG	1 cut(s)	1357
Ama87I	CYCGRG	2 cut(s)	340, 1804
AoxI	GGCC	5 cut(s)	22, 59, 616, 1123, 1905
ApaLI	GTGCAC	1 cut(s)	294
ApeKI	GCWGC	3 cut(s)	407, 1157, 1934
ApoI	RAATTY	5 cut(s)	10, 604, 1181, 1263, 1540
ArsI	GACNNNNNNTTYG	6 cut(s)	448, 480, 875, 907, 1026, 1058
AsiGI	ACCGGT	1 cut(s)	212
Asp700I	GAANNNNTTC	2 cut(s)	69, 265
AspA2I	CCTAGG	1 cut(s)	1112
AspS9I	GGNCC	4 cut(s)	60, 665, 1145, 1405
AsuC2I	CCSGG	2 cut(s)	1805, 1806
AsuHPI	GGTGA	3 cut(s)	182, 728, 1399
AsuII	TTCGAA	2 cut(s)	608, 1045
AvaI	CYCGRG	2 cut(s)	340, 1804
AvaII	GGWCC	3 cut(s)	665, 1145, 1405
AvrII	CCTAGG	1 cut(s)	1112
AxyI	CCTNAGG	1 cut(s)	131
BaeGI	GKGCMC	2 cut(s)	298, 1754
BalI	TGGCCA	2 cut(s)	618, 1125
BamHI	GGATCC	1 cut(s)	1465
BanII	GRGCYC	1 cut(s)	1436
BbsI	GAAGAC	2 cut(s)	461, 1085
Bbv12I	GWGCWC	2 cut(s)	298, 1880
BbvI	GCAGC	3 cut(s)	419, 1144, 1946
BccI	CCATC	6 cut(s)	350, 539, 1204, 1267, 1378, 1591
BceAI	ACGGC	2 cut(s)	465, 1892
BciT130I	CCWGG	1 cut(s)	1023
BclI	TGATCA	1 cut(s)	733
BcnI	CCSGG	2 cut(s)	1805, 1806
BcoDI	GTCTC	3 cut(s)	111, 1027, 1756
BfaI	CTAG	5 cut(s)	381, 417, 1113, 1364, 1716
BfmI	CTRYAG	1 cut(s)	671
BglII	AGATCT	1 cut(s)	1778
BisI	GCNGC	4 cut(s)	408, 531, 1158, 1935
BlnI	CCTAGG	1 cut(s)	1112
BlpI	GCTNAGC	1 cut(s)	1879
BlsI	GCNGC	4 cut(s)	409, 532, 1159, 1936
Bme1390I	CCNGG	3 cut(s)	1023, 1805, 1806
Bme18I	GGWCC	3 cut(s)	665, 1145, 1405
BmeT110I	CYCGRG	2 cut(s)	340, 1804
BmgBI	CACGTC	1 cut(s)	1028
BmgT120I	GGNCC	4 cut(s)	60, 665, 1145, 1405
BmiI	GGNNCC	2 cut(s)	1407, 1467
BmrFI	CCNGG	3 cut(s)	1023, 1805, 1806
BmrI	ACTGGG	2 cut(s)	249, 1764
BmsI	GCATC	3 cut(s)	1357, 1614, 1978
BmuI	ACTGGG	2 cut(s)	249, 1764
BpiI	GAAGAC	2 cut(s)	461, 1085
Bpu1102I	GCTNAGC	1 cut(s)	1879
Bpu14I	TTCGAA	2 cut(s)	608, 1045
BpuEI	CTTGAG	1 cut(s)	1610
BpuMI	CCSGG	2 cut(s)	1805, 1806
BsaBI	GATNNNNATC	1 cut(s)	1799
BsaI	GGTCTC	3 cut(s)	111, 1027, 1756
BsaWI	WCCGGW	1 cut(s)	212
BsaXI	ACNNNNNCTCC	2 cut(s)	1662, 1692
Bsc4I	CCNNNNNNNGG	8 cut(s)	161, 745, 880, 1113, 1352, 1414, 1556, 1863
Bse118I	RCCGGY	2 cut(s)	212, 403
Bse1I	ACTGG	5 cut(s)	244, 619, 838, 1148, 1759
Bse21I	CCTNAGG	1 cut(s)	131
Bse3DI	GCAATG	1 cut(s)	818
Bse8I	GATNNNNATC	1 cut(s)	1799
BseBI	CCWGG	1 cut(s)	1023
BseGI	GGATG	8 cut(s)	109, 637, 1122, 1215, 1309, 1459, 1637, 1987
BseJI	GATNNNNATC	1 cut(s)	1799
BseLI	CCNNNNNNNGG	8 cut(s)	161, 745, 880, 1113, 1352, 1414, 1556, 1863
BseMI	GCAATG	1 cut(s)	818
BseMII	CTCAG	4 cut(s)	1029, 1484, 1544, 1893
BseNI	ACTGG	5 cut(s)	244, 619, 838, 1148, 1759
BseSI	GKGCMC	2 cut(s)	298, 1754
BseXI	GCAGC	3 cut(s)	419, 1144, 1946
BsgI	GTGCAG	1 cut(s)	1599
BshFI	GGCC	5 cut(s)	24, 61, 618, 1125, 1907
BshTI	ACCGGT	1 cut(s)	212
BsiHKAI	GWGCWC	2 cut(s)	298, 1880
BsiHKCI	CYCGRG	2 cut(s)	340, 1804
BsiSI	CCGG	3 cut(s)	213, 404, 1805
BslFI	GGGAC	2 cut(s)	761, 896
BslI	CCNNNNNNNGG	8 cut(s)	161, 745, 880, 1113, 1352, 1414, 1556, 1863
BsmAI	GTCTC	3 cut(s)	111, 1027, 1756
BsmFI	GGGAC	2 cut(s)	761, 896
BsnI	GGCC	5 cut(s)	24, 61, 618, 1125, 1907
Bso31I	GGTCTC	3 cut(s)	111, 1027, 1756
BsoBI	CYCGRG	2 cut(s)	340, 1804
Bsp119I	TTCGAA	2 cut(s)	608, 1045
Bsp1286I	GDGCHC	4 cut(s)	298, 1436, 1754, 1880
Bsp1720I	GCTNAGC	1 cut(s)	1879
Bsp19I	CCATGG	1 cut(s)	1818
BspACI	CCGC	2 cut(s)	162, 530
BspANI	GGCC	5 cut(s)	24, 61, 618, 1125, 1907
BspCNI	CTCAG	4 cut(s)	1030, 1483, 1545, 1892
BspLI	GGNNCC	2 cut(s)	1407, 1467
BspMAI	CTGCAG	1 cut(s)	675
BspPI	GGATC	7 cut(s)	729, 864, 962, 987, 1460, 1473, 1885
BspT104I	TTCGAA	2 cut(s)	608, 1045
BspTNI	GGTCTC	3 cut(s)	111, 1027, 1756
BsrDI	GCAATG	1 cut(s)	818
BsrFI	RCCGGY	2 cut(s)	212, 403
BsrI	ACTGG	5 cut(s)	244, 619, 838, 1148, 1759
BssAI	RCCGGY	2 cut(s)	212, 403
BssT1I	CCWWGG	5 cut(s)	36, 971, 1112, 1686, 1818
Bst2UI	CCWGG	1 cut(s)	1023
Bst4CI	ACNGT	2 cut(s)	740, 1858
Bst6I	CTCTTC	2 cut(s)	1171, 1881
BstBI	TTCGAA	2 cut(s)	608, 1045
BstC8I	GCNNGC	3 cut(s)	405, 1582, 1876
BstDEI	CTNAG	6 cut(s)	131, 486, 1038, 1470, 1553, 1879
BstDSI	CCRYGG	5 cut(s)	395, 739, 1818, 1857, 1908
BstF5I	GGATG	8 cut(s)	109, 637, 1122, 1215, 1309, 1459, 1637, 1987
BstMAI	GTCTC	3 cut(s)	111, 1027, 1756
BstMWI	GCNNNNNNNGC	6 cut(s)	14, 413, 422, 773, 1166, 1880
BstNI	CCWGG	1 cut(s)	1023
BstNSI	RCATGY	1 cut(s)	162
BstSCI	CCNGG	3 cut(s)	1021, 1803, 1804
BstSFI	CTRYAG	1 cut(s)	671
BstSLI	GKGCMC	2 cut(s)	298, 1754
BstV1I	GCAGC	3 cut(s)	419, 1144, 1946
BstV2I	GAAGAC	2 cut(s)	461, 1085
BstX2I	RGATCY	3 cut(s)	1465, 1778, 1890
BstYI	RGATCY	3 cut(s)	1465, 1778, 1890
Bsu36I	CCTNAGG	1 cut(s)	131
BsuRI	GGCC	5 cut(s)	24, 61, 618, 1125, 1907
BtgI	CCRYGG	5 cut(s)	395, 739, 1818, 1857, 1908
BtrI	CACGTC	1 cut(s)	1028
BtsCI	GGATG	8 cut(s)	109, 637, 1122, 1215, 1309, 1459, 1637, 1987
BtsI	GCAGTG	1 cut(s)	668
BtsIMutI	CAGTG	5 cut(s)	668, 1006, 1550, 1752, 1785
Cac8I	GCNNGC	3 cut(s)	405, 1582, 1876
CaiI	CAGNNNCTG	1 cut(s)	1357
Cfr10I	RCCGGY	2 cut(s)	212, 403
Cfr13I	GGNCC	4 cut(s)	60, 665, 1145, 1405
Cfr9I	CCCGGG	1 cut(s)	1804
Csp6I	GTAC	2 cut(s)	801, 1721
CspAI	ACCGGT	1 cut(s)	212
CspCI	CAANNNNNGTGG	2 cut(s)	982, 1017
CviAII	CATG	6 cut(s)	159, 620, 1083, 1316, 1819, 1871
CviQI	GTAC	2 cut(s)	801, 1721
DdeI	CTNAG	6 cut(s)	131, 486, 1038, 1470, 1553, 1879
DraIII	CACNNNGTG	2 cut(s)	1556, 1718
EaeI	YGGCCR	3 cut(s)	616, 1123, 1905
Eam1104I	CTCTTC	2 cut(s)	1171, 1881
EarI	CTCTTC	2 cut(s)	1171, 1881
Eco130I	CCWWGG	5 cut(s)	36, 971, 1112, 1686, 1818
Eco24I	GRGCYC	1 cut(s)	1436
Eco31I	GGTCTC	3 cut(s)	111, 1027, 1756
Eco47I	GGWCC	3 cut(s)	665, 1145, 1405
Eco57I	CTGAAG	1 cut(s)	1905
Eco81I	CCTNAGG	1 cut(s)	131
Eco88I	CYCGRG	2 cut(s)	340, 1804
EcoRI	GAATTC	1 cut(s)	1540
EcoRII	CCWGG	1 cut(s)	1021
EcoT14I	CCWWGG	5 cut(s)	36, 971, 1112, 1686, 1818
EcoT22I	ATGCAT	1 cut(s)	1192
EcoT38I	GRGCYC	1 cut(s)	1436
ErhI	CCWWGG	5 cut(s)	36, 971, 1112, 1686, 1818
FaeI	CATG	6 cut(s)	162, 623, 1086, 1319, 1822, 1874
FalI	AAGNNNNNCTT	4 cut(s)	694, 726, 1238, 1270
FaqI	GGGAC	2 cut(s)	761, 896
FatI	CATG	6 cut(s)	158, 619, 1082, 1315, 1818, 1870
FauI	CCCGC	1 cut(s)	155
FbaI	TGATCA	1 cut(s)	733
Fnu4HI	GCNGC	4 cut(s)	408, 531, 1158, 1935
FokI	GGATG	8 cut(s)	96, 644, 1129, 1222, 1316, 1466, 1624, 1994
FriOI	GRGCYC	1 cut(s)	1436
Fsp4HI	GCNGC	4 cut(s)	408, 531, 1158, 1935
FspBI	CTAG	5 cut(s)	381, 417, 1113, 1364, 1716
GluI	GCNGC	4 cut(s)	408, 531, 1158, 1935
HaeIII	GGCC	5 cut(s)	24, 61, 618, 1125, 1907
HapII	CCGG	3 cut(s)	213, 404, 1805
Hin1II	CATG	6 cut(s)	162, 623, 1086, 1319, 1822, 1874
HinfI	GANTC	6 cut(s)	65, 390, 560, 1100, 1800, 1867
HpaII	CCGG	3 cut(s)	213, 404, 1805
HphI	GGTGA	3 cut(s)	182, 728, 1399
Hpy166II	GTNNAC	3 cut(s)	296, 668, 1721
Hpy188I	TCNGA	4 cut(s)	729, 864, 1473, 1895
Hpy188III	TCNNGA	5 cut(s)	233, 579, 639, 1202, 1364
Hpy8I	GTNNAC	3 cut(s)	296, 668, 1721
HpyCH4III	ACNGT	2 cut(s)	740, 1858
HpyCH4IV	ACGT	3 cut(s)	651, 1027, 1296
HpyF10VI	GCNNNNNNNGC	6 cut(s)	14, 413, 422, 773, 1166, 1880
HpyF3I	CTNAG	6 cut(s)	131, 486, 1038, 1470, 1553, 1879
HpySE526I	ACGT	3 cut(s)	651, 1027, 1296
Hsp92II	CATG	6 cut(s)	162, 623, 1086, 1319, 1822, 1874
KroI	GCCGGC	1 cut(s)	403
KroNI	GCCGGC	1 cut(s)	405
Ksp22I	TGATCA	1 cut(s)	733
LmnI	GCTCC	6 cut(s)	422, 475, 808, 1481, 1511, 1552
Lsp1109I	GCAGC	3 cut(s)	419, 1144, 1946
LweI	GCATC	3 cut(s)	1357, 1614, 1978
MaeI	CTAG	5 cut(s)	381, 417, 1113, 1364, 1716
MaeII	ACGT	3 cut(s)	651, 1027, 1296
MaeIII	GTNAC	2 cut(s)	189, 1459
MflI	RGATCY	3 cut(s)	1465, 1778, 1890
MhlI	GDGCHC	4 cut(s)	298, 1436, 1754, 1880
MlsI	TGGCCA	2 cut(s)	618, 1125
MluNI	TGGCCA	2 cut(s)	618, 1125
MlyI	GAGTC	2 cut(s)	384, 569
MmeI	TCCRAC	2 cut(s)	414, 1359
Mox20I	TGGCCA	2 cut(s)	618, 1125
Mph1103I	ATGCAT	1 cut(s)	1192
MroNI	GCCGGC	1 cut(s)	403
MroXI	GAANNNNTTC	2 cut(s)	69, 265
MscI	TGGCCA	2 cut(s)	618, 1125
MseI	TTAA	7 cut(s)	1268, 1292, 1323, 1395, 1919, 1958, 1995
MslI	CAYNNNNRTG	1 cut(s)	864
Msp20I	TGGCCA	2 cut(s)	618, 1125
MspA1I	CMGCKG	3 cut(s)	1169, 1883, 1937
MspI	CCGG	3 cut(s)	213, 404, 1805
MspR9I	CCNGG	3 cut(s)	1023, 1805, 1806
MvaI	CCWGG	1 cut(s)	1023
MwoI	GCNNNNNNNGC	6 cut(s)	14, 413, 422, 773, 1166, 1880
NaeI	GCCGGC	1 cut(s)	405
NciI	CCSGG	2 cut(s)	1805, 1806
NcoI	CCATGG	1 cut(s)	1818
NgoMIV	GCCGGC	1 cut(s)	403
NlaIII	CATG	6 cut(s)	162, 623, 1086, 1319, 1822, 1874
NlaIV	GGNNCC	2 cut(s)	1407, 1467
NmuCI	GTSAC	1 cut(s)	189
NsiI	ATGCAT	1 cut(s)	1192
NspI	RCATGY	1 cut(s)	162
NspV	TTCGAA	2 cut(s)	608, 1045
PdiI	GCCGGC	1 cut(s)	405
PdmI	GAANNNNTTC	2 cut(s)	69, 265
PfeI	GAWTC	4 cut(s)	65, 1100, 1800, 1867
PflMI	CCANNNNNTGG	1 cut(s)	1556
PinAI	ACCGGT	1 cut(s)	212
PkrI	GCNGC	4 cut(s)	409, 532, 1159, 1936
PleI	GAGTC	2 cut(s)	384, 568
PpsI	GAGTC	2 cut(s)	384, 568
Psp6I	CCWGG	1 cut(s)	1021
PspGI	CCWGG	1 cut(s)	1021
PspN4I	GGNNCC	2 cut(s)	1407, 1467
PspPI	GGNCC	4 cut(s)	60, 665, 1145, 1405
PstI	CTGCAG	1 cut(s)	675
PstNI	CAGNNNCTG	1 cut(s)	1357
PsuI	RGATCY	3 cut(s)	1465, 1778, 1890
PvuII	CAGCTG	3 cut(s)	1169, 1883, 1937
RsaI	GTAC	2 cut(s)	802, 1722
RsaNI	GTAC	2 cut(s)	801, 1721
RseI	CAYNNNNRTG	1 cut(s)	864
SaqAI	TTAA	7 cut(s)	1268, 1292, 1323, 1395, 1919, 1958, 1995
SatI	GCNGC	4 cut(s)	408, 531, 1158, 1935
Sau96I	GGNCC	4 cut(s)	60, 665, 1145, 1405
SchI	GAGTC	2 cut(s)	384, 569
ScrFI	CCNGG	3 cut(s)	1023, 1805, 1806
SduI	GDGCHC	4 cut(s)	298, 1436, 1754, 1880
SfaNI	GCATC	3 cut(s)	1357, 1614, 1978
SfcI	CTRYAG	1 cut(s)	671
SfuI	TTCGAA	2 cut(s)	608, 1045
SinI	GGWCC	3 cut(s)	665, 1145, 1405
SmaI	CCCGGG	1 cut(s)	1806
SmiMI	CAYNNNNRTG	1 cut(s)	864
SmlI	CTYRAG	1 cut(s)	1589
SmoI	CTYRAG	1 cut(s)	1589
SsiI	CCGC	2 cut(s)	162, 530
SspI	AATATT	1 cut(s)	1813
SspMI	CTAG	5 cut(s)	381, 417, 1113, 1364, 1716
StyD4I	CCNGG	3 cut(s)	1021, 1803, 1804
StyI	CCWWGG	5 cut(s)	36, 971, 1112, 1686, 1818
TaaI	ACNGT	2 cut(s)	740, 1858
TaiI	ACGT	3 cut(s)	654, 1030, 1299
TaqI	TCGA	7 cut(s)	56, 137, 332, 608, 1045, 1342, 1986
TauI	GCSGC	1 cut(s)	533
TfiI	GAWTC	4 cut(s)	65, 1100, 1800, 1867
Tru1I	TTAA	7 cut(s)	1268, 1292, 1323, 1395, 1919, 1958, 1995
Tru9I	TTAA	7 cut(s)	1268, 1292, 1323, 1395, 1919, 1958, 1995
TscAI	CASTG	5 cut(s)	675, 1006, 1557, 1759, 1792
TseFI	GTSAC	1 cut(s)	189
TseI	GCWGC	3 cut(s)	407, 1157, 1934
Tsp45I	GTSAC	1 cut(s)	189
TspDTI	ATGAA	2 cut(s)	951, 1940
TspGWI	ACGGA	3 cut(s)	1096, 1365, 1478
TspMI	CCCGGG	1 cut(s)	1804
TspRI	CASTG	5 cut(s)	675, 1006, 1557, 1759, 1792
Van91I	CCANNNNNTGG	1 cut(s)	1556
VneI	GTGCAC	1 cut(s)	294
VpaK11BI	GGWCC	3 cut(s)	665, 1145, 1405
XapI	RAATTY	5 cut(s)	10, 604, 1181, 1263, 1540
XbaI	TCTAGA	1 cut(s)	1363
XceI	RCATGY	1 cut(s)	162
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1133
XmaI	CCCGGG	1 cut(s)	1804
XmaJI	CCTAGG	1 cut(s)	1112
XmnI	GAANNNNTTC	2 cut(s)	69, 265
XspI	CTAG	5 cut(s)	381, 417, 1113, 1364, 1716
Zsp2I	ATGCAT	1 cut(s)	1192

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.