Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0009958

Physical Location & Seq

Genomic Coordinates Reverse (-)

4981025 .. 4982848

Gene Structure 1824 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG066300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1824 bp

ATGTATGCTACTAATTTGACAAAGGGCCAAGCATTTCCATTGGCTATCAGGGTTTGTTCAAAACCCAGAAGCTTTAAAGGGTTCCACAGCTCAAAGCCCCAATCTTTACAGATTGGTGCTCACCCAAAACCCTCACTAAACCGTAGTTCCCCTTTGGTTGATTTTGCTACCGATTCTAGTTATAGGGTTGTAGGAAATGGAATTGTTGCAAAACCCAGAACTAATATGAGCGGATTCAGGGTTAGAAGTGCTACACAGAATTGGATGTTGGTAAGAGGTAGAGGTTTTTCGAATTGGTCTAGTCAGGAGGGTAATGGAGAGAGTAGTAGTGTGGGAAGAAGTGGAAATAGACTGCCGTGGTTGGCAGCTAAGGAAGCAAAGAGGTTGGAGCAGCGAGCAACGGCTACAAAAATACCTCTTTCATCTTGGGGGGAGTCTGCTAAGAGGTTAGAGAAAGACAGCAATGCTGGTTCTTCTGGGGAAGAGGCCATGAGTTTGGCCAGGAGTAGAGGGGGAGACCGCCATAGTAAGTCATCATGGGACAAATCAGCAAAAAGGGTAGAGGAAGAAAGAAAGCCGAAAGCTGAGCGTTCTTCTTGGGAGGTGTCTTCAGAAGGTTTTGTTGGGAATGGTGGTCCATCGGAAAAGAGGAGTGCAGAAAGAAGAATTGGAATGGTGAAGGATAGGCGAAGTGAGTATAGCGTGAGGGATAGAAGACAGGAAGAAGCCAACTCAGAAGGGAGTGGAGAGGAGGAAGAAATGGATGTTGGTGACGATCCAAGGTGGGATCAGATCAAGAATAAGTTTAGGAGAATGGAAGATGTCAAATCTGAGAAACCTGAGTATCGAAGGTGGGATAGGCAGGAAAATTGGGGCAGAAAGACATGGCAAGAGGCTAGTGAATCGTCGGTGCCTAGACTGGTTGGCCAAGGTGTTTATGGTGTTGGTCCAGTTTTGGCTGCTTTGTCAGCTGGAAGAAGAGAATTTTATACGTTGTATGTTCAAGAAGGGCTGGATTTGAGCAATAATAATAGGAAGAAGAAGGACAAGAAGGGATTTGAGAGAGTTTTGAGGATGGCTGAAAATTTTGGGGTGAACATAAAGGAATTGCGCAAGCATGATCTTAATATGGCCGCTGATAATCGACCCCATCAGGGTCTGCTTCTAGATGCCTCTCCATTGGAGATGGTTAAAATTAAGGAATTGGACCCTGTTTCAGTGGAGGAAGATAAGGGTTCTCTTTGGGTAGCTTTGGATGAGGTTACAGATCCTCAAAATTTGGGGGCAATCATCAGGTCCTCTTACTTCTTTGGAGCTGCAGGCGTGGTGTTATGCGCAAAGAATTCAGCCCCACTGAGTGGCGTTGTGAGCAAAGCAAGTGCAGGCTCACTTGAGTTAATGGAGTTGCGATATTGCAAGAACATGATGCAGTTTCTAACATCCTCAGCTGAAAATGGTTGGCGTGTTCTTGGTGGTTCTGTTTCTAGCAAAGCTATTCCTTTGAACGAGATAGTACCTAGTGAACCAACCATTCTTGTTCTGGGTAGTGAGGGCACTGGGTTGAGGCCTTTGGTGGAAAGATCATGCACTCAATTGATTAGAATCCCCGGGAATATTCCTGCAGATGTAGCTGCTGCTGGTTTTGACGATAGCGAATCCGTGGAAGTGAATCATGGGTGCTCTGCTGAAGAGTTCCAGTCTTTTTTGGCTGTGGAGAGCTTAAATGTCAGTGTTGCAGCTGGTGTGCTTCTTCATCACTTAGTGGGAAACAATGAGAAAAGTGAAGTTCATGTGGTTGCTCAGCAGAATAACGGACTGGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000154 GO:0000451 GO:0000453 GO:0001510 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008168 GO:0008171 GO:0008173 GO:0008649 GO:0008757 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0016435 GO:0016740 GO:0016741 GO:0022613 GO:0031167 GO:0032259 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0070039 GO:0071704 GO:0071840 GO:0090304 GO:0140098 GO:0140102 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SpoU_methylase SpoU_sub_bind

Protein Analysis

607

Amino Acids

66.83

Weight (kDa)

8.93

Isoelectric Point (pI)

51.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SpoU_sub_bind	PF08032	312 - 396	7.6e-09	RNA 2'-O ribose methyltransferase substrate binding
SpoU_methylase	PF00588	414 - 538	4.5e-26	SpoU rRNA Methylase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009958)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G19870
fragaria_vesca	FvH4_1g06150 FvH4_1g06190
malus_domestica	MD02G1065700.v1.1 MD15G1196600.v1.1
prunus_persica	Prupe.7G219800_v2.0.a1 Prupe.7G219800_v2.0.a1
pyrus_communis	pycom02g05180 pycom02g05220 pycom15g17570
rosa_chinensis	RchiOBHm_Chr2g0091911
rosa_laevigata	RLG00000016260
rosa_multiflora	Rmu_sc0031557.1_g000002 Rmu_sc0031558.1_g000001
rosa_roxburghii	Rroxscaffold_2G00149620
rosa_rugosa	Rorug02G0021600
rosa_samantha	Rh2AG067200 Rh2BG066400 Rh2CG067700 Rh2DG066300
rosa_wichuraiana	Rw2G005380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	1112, 1336
AccB1I	GGYRCC	1 cut(s)	910
AccB7I	CCANNNNNTGG	1 cut(s)	1358
AccBSI	CCGCTC	1 cut(s)	231
AciI	CCGC	3 cut(s)	231, 520, 1134
AclWI	GGATC	3 cut(s)	770, 795, 1262
AcoI	YGGCCR	3 cut(s)	498, 925, 1131
AcsI	RAATTY	4 cut(s)	983, 1084, 1276, 1342
AcuI	CTGAAG	2 cut(s)	594, 1707
AdeI	CACNNNGTG	2 cut(s)	1358, 1762
AfaI	GTAC	1 cut(s)	1515
AfiI	CCNNNNNNNGG	2 cut(s)	1154, 1358
AgsI	TTSAA	3 cut(s)	60, 1004, 1504
AjnI	CCWGG	1 cut(s)	500
AjuI	GAANNNNNNNTTGG	8 cut(s)	251, 283, 606, 638, 651, 683, 750, 782
Alw21I	GWGCWC	2 cut(s)	121, 1682
Alw26I	GTCTC	1 cut(s)	510
AlwI	GGATC	3 cut(s)	770, 795, 1262
AlwNI	CAGNNNCTG	1 cut(s)	1159
Ama87I	CYCGRG	1 cut(s)	1607
AoxI	GGCC	6 cut(s)	25, 486, 498, 925, 1131, 1565
ApeKI	GCWGC	7 cut(s)	365, 391, 959, 1316, 1631, 1634, 1736
ApoI	RAATTY	4 cut(s)	983, 1084, 1276, 1342
AspLEI	GCGC	2 cut(s)	1113, 1337
AspS9I	GGNCC	5 cut(s)	25, 635, 947, 1207, 1296
AsuC2I	CCSGG	2 cut(s)	1608, 1609
AsuHPI	GGTGA	4 cut(s)	113, 688, 782, 1105
AsuII	TTCGAA	1 cut(s)	290
AvaI	CYCGRG	1 cut(s)	1607
AvaII	GGWCC	4 cut(s)	635, 947, 1207, 1296
BaeGI	GKGCMC	1 cut(s)	1556
BaeI	ACNNNNGTAYC	2 cut(s)	827, 860
BalI	TGGCCA	2 cut(s)	500, 927
BanI	GGYRCC	1 cut(s)	910
BbsI	GAAGAC	2 cut(s)	600, 721
Bbv12I	GWGCWC	2 cut(s)	121, 1682
BbvCI	CCTCAGC	1 cut(s)	1444
BbvI	GCAGC	7 cut(s)	377, 403, 946, 1303, 1618, 1621, 1748
BccI	CCATC	4 cut(s)	646, 1069, 1158, 1180
BceAI	ACGGC	2 cut(s)	340, 417
BciT130I	CCWGG	1 cut(s)	502
BcnI	CCSGG	2 cut(s)	1608, 1609
BcoDI	GTCTC	1 cut(s)	510
BfaI	CTAG	7 cut(s)	177, 300, 897, 915, 1166, 1485, 1518
BfmI	CTRYAG	2 cut(s)	1317, 1620
BisI	GCNGC	8 cut(s)	366, 392, 960, 1134, 1317, 1632, 1635, 1737
BlpI	GCTNAGC	2 cut(s)	585, 1800
BlsI	GCNGC	8 cut(s)	367, 393, 961, 1135, 1318, 1633, 1636, 1738
Bme1390I	CCNGG	3 cut(s)	502, 1608, 1609
Bme18I	GGWCC	4 cut(s)	635, 947, 1207, 1296
BmeT110I	CYCGRG	1 cut(s)	1607
BmgT120I	GGNCC	5 cut(s)	25, 635, 947, 1207, 1296
BmiI	GGNNCC	3 cut(s)	83, 912, 1209
BmrFI	CCNGG	3 cut(s)	502, 1608, 1609
BmrI	ACTGGG	1 cut(s)	1566
BmsI	GCATC	2 cut(s)	1159, 1416
BmuI	ACTGGG	1 cut(s)	1566
BpiI	GAAGAC	2 cut(s)	600, 721
Bpu10I	CCTNAGC	2 cut(s)	369, 1444
Bpu1102I	GCTNAGC	2 cut(s)	585, 1800
Bpu14I	TTCGAA	1 cut(s)	290
BpuEI	CTTGAG	1 cut(s)	1412
BpuMI	CCSGG	2 cut(s)	1608, 1609
BsaBI	GATNNNNATC	1 cut(s)	1601
BsaI	GGTCTC	1 cut(s)	510
BsaJI	CCNNGG	6 cut(s)	356, 779, 928, 1606, 1607, 1659
Bsc4I	CCNNNNNNNGG	2 cut(s)	1154, 1358
Bse1I	ACTGG	5 cut(s)	924, 950, 1561, 1696, 1821
Bse3DI	GCAATG	1 cut(s)	469
Bse8I	GATNNNNATC	1 cut(s)	1601
BseBI	CCWGG	1 cut(s)	502
BseDI	CCNNGG	6 cut(s)	356, 779, 928, 1606, 1607, 1659
BseGI	GGATG	5 cut(s)	270, 769, 1080, 1261, 1439
BseJI	GATNNNNATC	1 cut(s)	1601
BseLI	CCNNNNNNNGG	2 cut(s)	1154, 1358
BseMI	GCAATG	1 cut(s)	469
BseMII	CTCAG	7 cut(s)	576, 747, 822, 831, 1346, 1458, 1814
BseNI	ACTGG	5 cut(s)	924, 950, 1561, 1696, 1821
BseRI	GAGGAG	2 cut(s)	664, 764
BseSI	GKGCMC	1 cut(s)	1556
BseXI	GCAGC	7 cut(s)	377, 403, 946, 1303, 1618, 1621, 1748
BsgI	GTGCAG	2 cut(s)	675, 1401
BshFI	GGCC	6 cut(s)	27, 488, 500, 927, 1133, 1567
BshNI	GGYRCC	1 cut(s)	910
BsiHKAI	GWGCWC	2 cut(s)	121, 1682
BsiHKCI	CYCGRG	1 cut(s)	1607
BsiSI	CCGG	1 cut(s)	1608
BslFI	GGGAC	1 cut(s)	554
BslI	CCNNNNNNNGG	2 cut(s)	1154, 1358
BsmAI	GTCTC	1 cut(s)	510
BsmFI	GGGAC	1 cut(s)	554
BsnI	GGCC	6 cut(s)	27, 488, 500, 927, 1133, 1567
Bso31I	GGTCTC	1 cut(s)	510
BsoBI	CYCGRG	1 cut(s)	1607
Bsp119I	TTCGAA	1 cut(s)	290
Bsp1286I	GDGCHC	3 cut(s)	121, 1556, 1682
Bsp143I	GATC	6 cut(s)	775, 787, 792, 1120, 1267, 1580
Bsp1720I	GCTNAGC	2 cut(s)	585, 1800
BspACI	CCGC	3 cut(s)	231, 520, 1134
BspANI	GGCC	6 cut(s)	27, 488, 500, 927, 1133, 1567
BspCNI	CTCAG	7 cut(s)	577, 746, 823, 832, 1347, 1457, 1813
BspLI	GGNNCC	3 cut(s)	83, 912, 1209
BspMAI	CTGCAG	2 cut(s)	1321, 1624
BspPI	GGATC	3 cut(s)	770, 795, 1262
BspT104I	TTCGAA	1 cut(s)	290
BspT107I	GGYRCC	1 cut(s)	910
BspTNI	GGTCTC	1 cut(s)	510
BsrBI	CCGCTC	1 cut(s)	231
BsrDI	GCAATG	1 cut(s)	469
BsrI	ACTGG	5 cut(s)	924, 950, 1561, 1696, 1821
BssECI	CCNNGG	6 cut(s)	356, 779, 928, 1606, 1607, 1659
BssMI	GATC	6 cut(s)	775, 787, 792, 1120, 1267, 1580
BssT1I	CCWWGG	2 cut(s)	779, 928
Bst2UI	CCWGG	1 cut(s)	502
Bst4CI	ACNGT	1 cut(s)	143
Bst6I	CTCTTC	3 cut(s)	477, 973, 1683
BstBI	TTCGAA	1 cut(s)	290
BstC8I	GCNNGC	4 cut(s)	396, 1115, 1321, 1384
BstDSI	CCRYGG	2 cut(s)	356, 1659
BstF5I	GGATG	5 cut(s)	270, 769, 1080, 1261, 1439
BstHHI	GCGC	2 cut(s)	1113, 1337
BstKTI	GATC	6 cut(s)	778, 790, 795, 1123, 1270, 1583
BstMAI	GTCTC	1 cut(s)	510
BstMBI	GATC	6 cut(s)	775, 787, 792, 1120, 1267, 1580
BstMWI	GCNNNNNNNGC	4 cut(s)	374, 968, 1368, 1628
BstNI	CCWGG	1 cut(s)	502
BstSCI	CCNGG	3 cut(s)	500, 1606, 1607
BstSFI	CTRYAG	2 cut(s)	1317, 1620
BstSLI	GKGCMC	1 cut(s)	1556
BstV1I	GCAGC	7 cut(s)	377, 403, 946, 1303, 1618, 1621, 1748
BstV2I	GAAGAC	2 cut(s)	600, 721
BstX2I	RGATCY	1 cut(s)	1267
BstXI	CCANNNNNNTGG	1 cut(s)	496
BstYI	RGATCY	1 cut(s)	1267
BsuRI	GGCC	6 cut(s)	27, 488, 500, 927, 1133, 1567
BtgI	CCRYGG	2 cut(s)	356, 1659
BtsCI	GGATG	5 cut(s)	270, 769, 1080, 1261, 1439
BtsIMutI	CAGTG	4 cut(s)	1224, 1352, 1554, 1735
Cac8I	GCNNGC	4 cut(s)	396, 1115, 1321, 1384
CaiI	CAGNNNCTG	1 cut(s)	1159
CfoI	GCGC	2 cut(s)	1113, 1337
Cfr13I	GGNCC	5 cut(s)	25, 635, 947, 1207, 1296
Cfr9I	CCCGGG	1 cut(s)	1607
Csp6I	GTAC	1 cut(s)	1514
CviAII	CATG	8 cut(s)	490, 537, 885, 1118, 1423, 1584, 1673, 1790
CviQI	GTAC	1 cut(s)	1514
DpnI	GATC	6 cut(s)	777, 789, 794, 1122, 1269, 1582
DpnII	GATC	6 cut(s)	775, 787, 792, 1120, 1267, 1580
DraI	TTTAAA	1 cut(s)	76
DraIII	CACNNNGTG	2 cut(s)	1358, 1762
EaeI	YGGCCR	3 cut(s)	498, 925, 1131
Eam1104I	CTCTTC	3 cut(s)	477, 973, 1683
EarI	CTCTTC	3 cut(s)	477, 973, 1683
Eco130I	CCWWGG	2 cut(s)	779, 928
Eco147I	AGGCCT	1 cut(s)	1567
Eco31I	GGTCTC	1 cut(s)	510
Eco47I	GGWCC	4 cut(s)	635, 947, 1207, 1296
Eco57I	CTGAAG	2 cut(s)	594, 1707
Eco88I	CYCGRG	1 cut(s)	1607
EcoO109I	RGGNCCY	1 cut(s)	1296
EcoRI	GAATTC	1 cut(s)	1342
EcoRII	CCWGG	1 cut(s)	500
EcoT14I	CCWWGG	2 cut(s)	779, 928
ErhI	CCWWGG	2 cut(s)	779, 928
FaeI	CATG	8 cut(s)	493, 540, 888, 1121, 1426, 1587, 1676, 1793
FaqI	GGGAC	1 cut(s)	554
FatI	CATG	8 cut(s)	489, 536, 884, 1117, 1422, 1583, 1672, 1789
Fnu4HI	GCNGC	8 cut(s)	366, 392, 960, 1134, 1317, 1632, 1635, 1737
FokI	GGATG	5 cut(s)	277, 776, 1087, 1268, 1426
Fsp4HI	GCNGC	8 cut(s)	366, 392, 960, 1134, 1317, 1632, 1635, 1737
FspBI	CTAG	7 cut(s)	177, 300, 897, 915, 1166, 1485, 1518
FspI	TGCGCA	2 cut(s)	1112, 1336
GlaI	GCGC	2 cut(s)	1112, 1336
GluI	GCNGC	8 cut(s)	366, 392, 960, 1134, 1317, 1632, 1635, 1737
HaeIII	GGCC	6 cut(s)	27, 488, 500, 927, 1133, 1567
HapII	CCGG	1 cut(s)	1608
HhaI	GCGC	2 cut(s)	1113, 1337
Hin1II	CATG	8 cut(s)	493, 540, 888, 1121, 1426, 1587, 1676, 1793
Hin6I	GCGC	2 cut(s)	1111, 1335
HinP1I	GCGC	2 cut(s)	1111, 1335
HindIII	AAGCTT	1 cut(s)	70
HinfI	GANTC	7 cut(s)	173, 234, 434, 902, 1602, 1655, 1669
HpaII	CCGG	1 cut(s)	1608
HphI	GGTGA	4 cut(s)	113, 688, 782, 1105
Hpy166II	GTNNAC	2 cut(s)	1096, 1523
Hpy188I	TCNGA	5 cut(s)	613, 643, 736, 792, 832
Hpy188III	TCNNGA	4 cut(s)	305, 796, 1004, 1166
Hpy8I	GTNNAC	2 cut(s)	1096, 1523
Hpy99I	CGWCG	1 cut(s)	910
HpyAV	CCTTC	7 cut(s)	608, 673, 731, 843, 1001, 1036, 1045
HpyCH4III	ACNGT	1 cut(s)	143
HpyCH4IV	ACGT	1 cut(s)	992
HpyCH4V	TGCA	9 cut(s)	209, 656, 1319, 1382, 1416, 1429, 1587, 1622, 1736
HpyF10VI	GCNNNNNNNGC	4 cut(s)	374, 968, 1368, 1628
HpySE526I	ACGT	1 cut(s)	992
Hsp92II	CATG	8 cut(s)	493, 540, 888, 1121, 1426, 1587, 1676, 1793
HspAI	GCGC	2 cut(s)	1111, 1335
Kzo9I	GATC	6 cut(s)	775, 787, 792, 1120, 1267, 1580
LmnI	GCTCC	2 cut(s)	388, 1313
Lsp1109I	GCAGC	7 cut(s)	377, 403, 946, 1303, 1618, 1621, 1748
LweI	GCATC	2 cut(s)	1159, 1416
MaeI	CTAG	7 cut(s)	177, 300, 897, 915, 1166, 1485, 1518
MaeII	ACGT	1 cut(s)	992
MaeIII	GTNAC	2 cut(s)	770, 1261
MalI	GATC	6 cut(s)	777, 789, 794, 1122, 1269, 1582
MbiI	CCGCTC	1 cut(s)	231
MboI	GATC	6 cut(s)	775, 787, 792, 1120, 1267, 1580
MfeI	CAATTG	1 cut(s)	1592
MflI	RGATCY	1 cut(s)	1267
MhlI	GDGCHC	3 cut(s)	121, 1556, 1682
MlsI	TGGCCA	2 cut(s)	500, 927
MluNI	TGGCCA	2 cut(s)	500, 927
MlyI	GAGTC	1 cut(s)	443
MmeI	TCCRAC	1 cut(s)	366
Mox20I	TGGCCA	2 cut(s)	500, 927
MscI	TGGCCA	2 cut(s)	500, 927
MseI	TTAA	6 cut(s)	75, 1125, 1191, 1197, 1397, 1721
Msp20I	TGGCCA	2 cut(s)	500, 927
MspA1I	CMGCKG	4 cut(s)	971, 1136, 1448, 1739
MspI	CCGG	1 cut(s)	1608
MspR9I	CCNGG	3 cut(s)	502, 1608, 1609
MunI	CAATTG	1 cut(s)	1592
MvaI	CCWGG	1 cut(s)	502
MwoI	GCNNNNNNNGC	4 cut(s)	374, 968, 1368, 1628
NciI	CCSGG	2 cut(s)	1608, 1609
NdeII	GATC	6 cut(s)	775, 787, 792, 1120, 1267, 1580
NlaIII	CATG	8 cut(s)	493, 540, 888, 1121, 1426, 1587, 1676, 1793
NlaIV	GGNNCC	3 cut(s)	83, 912, 1209
NmuCI	GTSAC	1 cut(s)	770
NsbI	TGCGCA	2 cut(s)	1112, 1336
NspV	TTCGAA	1 cut(s)	290
PceI	AGGCCT	1 cut(s)	1567
PfeI	GAWTC	6 cut(s)	173, 234, 902, 1602, 1655, 1669
PflMI	CCANNNNNTGG	1 cut(s)	1358
PkrI	GCNGC	8 cut(s)	367, 393, 961, 1135, 1318, 1633, 1636, 1738
PleI	GAGTC	1 cut(s)	442
PpsI	GAGTC	1 cut(s)	442
PpuMI	RGGWCCY	1 cut(s)	1296
Psp5II	RGGWCCY	1 cut(s)	1296
Psp6I	CCWGG	1 cut(s)	500
PspGI	CCWGG	1 cut(s)	500
PspN4I	GGNNCC	3 cut(s)	83, 912, 1209
PspPI	GGNCC	5 cut(s)	25, 635, 947, 1207, 1296
PspPPI	RGGWCCY	1 cut(s)	1296
PstI	CTGCAG	2 cut(s)	1321, 1624
PstNI	CAGNNNCTG	1 cut(s)	1159
PsuI	RGATCY	1 cut(s)	1267
PvuII	CAGCTG	3 cut(s)	971, 1448, 1739
RsaI	GTAC	1 cut(s)	1515
RsaNI	GTAC	1 cut(s)	1514
SaqAI	TTAA	6 cut(s)	75, 1125, 1191, 1197, 1397, 1721
SatI	GCNGC	8 cut(s)	366, 392, 960, 1134, 1317, 1632, 1635, 1737
Sau3AI	GATC	6 cut(s)	775, 787, 792, 1120, 1267, 1580
Sau96I	GGNCC	5 cut(s)	25, 635, 947, 1207, 1296
SchI	GAGTC	1 cut(s)	443
ScrFI	CCNGG	3 cut(s)	502, 1608, 1609
SduI	GDGCHC	3 cut(s)	121, 1556, 1682
SfaNI	GCATC	2 cut(s)	1159, 1416
SfcI	CTRYAG	2 cut(s)	1317, 1620
SfuI	TTCGAA	1 cut(s)	290
SinI	GGWCC	4 cut(s)	635, 947, 1207, 1296
SmaI	CCCGGG	1 cut(s)	1609
SmlI	CTYRAG	1 cut(s)	1391
SmoI	CTYRAG	1 cut(s)	1391
SseBI	AGGCCT	1 cut(s)	1567
SsiI	CCGC	3 cut(s)	231, 520, 1134
SspI	AATATT	1 cut(s)	1615
SspMI	CTAG	7 cut(s)	177, 300, 897, 915, 1166, 1485, 1518
StuI	AGGCCT	1 cut(s)	1567
StyD4I	CCNGG	3 cut(s)	500, 1606, 1607
StyI	CCWWGG	2 cut(s)	779, 928
TaaI	ACNGT	1 cut(s)	143
TaiI	ACGT	1 cut(s)	995
TaqI	TCGA	3 cut(s)	290, 847, 1144
TauI	GCSGC	1 cut(s)	1136
TfiI	GAWTC	6 cut(s)	173, 234, 902, 1602, 1655, 1669
Tru1I	TTAA	6 cut(s)	75, 1125, 1191, 1197, 1397, 1721
Tru9I	TTAA	6 cut(s)	75, 1125, 1191, 1197, 1397, 1721
TscAI	CASTG	4 cut(s)	1224, 1359, 1561, 1735
TseFI	GTSAC	1 cut(s)	770
TseI	GCWGC	7 cut(s)	365, 391, 959, 1316, 1631, 1634, 1736
Tsp45I	GTSAC	1 cut(s)	770
TspDTI	ATGAA	3 cut(s)	411, 1742, 1778
TspGWI	ACGGA	1 cut(s)	1648
TspMI	CCCGGG	1 cut(s)	1607
TspRI	CASTG	4 cut(s)	1224, 1359, 1561, 1735
Van91I	CCANNNNNTGG	1 cut(s)	1358
VpaK11BI	GGWCC	4 cut(s)	635, 947, 1207, 1296
XapI	RAATTY	4 cut(s)	983, 1084, 1276, 1342
XbaI	TCTAGA	1 cut(s)	1165
XcmI	CCANNNNNNNNNTGG	2 cut(s)	935, 1537
XmaI	CCCGGG	1 cut(s)	1607
XspI	CTAG	7 cut(s)	177, 300, 897, 915, 1166, 1485, 1518

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.