Rorug02G0021600
MYB Family

Myb/SANT-like DNA-binding domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000064
Physical Location & Seq
Reverse (-)
1753464 .. 1758718
5255 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0021600.1

Sequence Viewer

Length: 2820 bp
ATGGCGAGGGCAAAACTTATCTTAATCTGCCAGTGTGGTGGCGAATTCGTCAGGAAGGATGATGGAACCTTGTCATATACAGGAGGAGATGCACATGCAGTAGATATCAATCATGAAACGCTAATTGATGATCTCAAGTTGAAGTTAGCTGAAATGTGTAATTTAGAGCATAAATCTTTGTGCATCAAGTATTTTCTCCCAGGAAATAGGCGAACTCTCATCACTTTATCCAGTGATAAGGACTTGAAAAGGATGTATGAGTTCCACGGGAATGTGGTAACTGCTGATGTTTTTGTCATGGGAAAAGCAGGTTTTGATGCCGAAGAAGCCTTGAACACACTTCAAAGGGCATGTGGGATAAAACTGGCTGACTCTGTGACTCCCGTTGCTGCCTCCAGTACTTCAGCTGTTGTTTTTCACGCTGATGCCAATCATTCTGTTGCAGTTAATTCACCAATTGCACCAAGTGATGTTAATACCGCAGTTGTTCCTACTGCTTCAAATAATACTCCAGATGTCCCTTCCCCTGTTCTTGCTCCACAACAAGCAGGCTCTATTATATCTGCCAAAGAAGGGACTCAAAGCGCAAGTGGAGTGGCTCACACCTCAAACACTTTTCCTGCCTTTACTGATCATGCAGTTGCTATGACTTCAAAGCCGACCGGTTCCATTTCTCTTGCTGCTGATGCAAGTGTCCACAGCTTGGACGTAAATGATATGGACTCTACCCCTGCTGGTGTTATTAGTTCCAGTCCAAATGGTTCCATTTCTGTTGCTGCAGGTGCAAGTGTCCACAGCTTGGACATAATTGATATGGACTGCACCCCTGCCGATACCGTTAAGAAACGAAGGCGCACTGCTGCATGGAAAATTGGTCCAGATGGCCCTACCATTGTTTCTGTCAAAGATGATATTGGGGATAAAGGAAAACCTACGTCTCGGAAGAAGAATACTGTTGACTATAAAACTGCTCCAGAAACTGATAACGAGGATCAGCAAGAAGAGATTGTGCCGTGTAAAGATAGTAATAGCATTGACCCTATTCAGGCTATTCTAGGCCCGTCAAATGATGTTCCATCTGAAGAGTTGGTCACATTGTGGAAAGATGGTATCACTGGGGTTGGACAGGAGTTCACAAGTGTTCATGAATTTCGCGATGTACTGCAAAAATATGCCATTGCTCATCGTTTTATGTATAGGTTAAAAAAGAATGATACTAACCGTGCAAGTTGCATATGTATTGCTGAAGCCTGTTCTTGGAGAATTCAAGCATCCTGGGACTCATCTACCGAAAAGTTTGTGATAAAGAAGATGGAGAAAAGGCATACATGTGAAGGGGAGTCCTGGAAATTTTATCATCCGAAAAAGAATTGGTTGGTTAGTATCATTAAAGACAGATTAACAGACAACCCACATCTGAAGCCGAAAGAAATTGTCAATAGCATTCTTCAGGATTTTGGAATTACAGTGAACTATACTCAAGTACGGCGTGGAATTGAAGATGCAAAGGAACAACTTATGGGTTCTTATAAAGAAGCATATAACCAGTTACCTTGGTTTTGTGAGAAAATGGCAGAGGCAAATCCTGGTAGTAATATTAGGCTTTTCACTGGTGAGGATGGGAGATTTCAGCGTCTCTTTGAATGCTTTCATGCTTCAATACATGGCTTTCAGAATGGTTGCCGACCTATTATTTTTCTTGATTCTATGTCCTTAAAATCAAAATACCACGAGACATTTTTTGCAGCTACTGCTTTGGATGGAGATGATGGTGCTTTCCCGGTTGCATTTGCCATAGTAGACACTGAGAATGATGATAACTGGCATTGGTTTTTGGATCAATTAAGATCAGCTGTTTCAACCACACAGTCCTTAACTATTGTCTTTGATAGAGAGAAAGGACTGGAGAAATTAGTGACTGAGGTATTTGAGAATTGCCACCATGGCTACACTATGCACCACCTTCTGAGAAGCTTCAAGAAAAACTTGAGGCCCCCATTTCATGGAGATGGAAAGGGTTCTTTGCTAAGTTGTTTCGTGGCTGCTGCCCAGTCACTCCGACTTGATGGTTTTAAGTATTTTACAGATCAAATTAAACAGGTTTCATCACATGCTTACGACTGGGTCCTCCAAATTGAACAAGAATGTTGGACAAATGTATTTTTCAAAGGTGAGCACTACAACCATATCACTGTCGATGTTGCAGAGACATACGCCAACTGGATAGAGGAAATGCGAGCATTGCCCATAATACGGAAGATAGAAGTGTTAAGCTCTAAGCTGATGGAATTGATAAATACTTGTCGAACTGATTCATGCACTTGGTCTACAGAACTTACTCCATCTAAGGAAGAAAAGCTGCAACAAAAAATGTTACAAGCGGATCGCCTTAAAGTATTATTTTCAACTGATACTCTTTTTGAGGTTCATAATGATTCCATTAATGTTGTGGATCTCAACAAAGGGGAGTGTAGTTGTCTGGATTGGAAATCAACTGGCCTACCTTGCTGCCATGTTATTGCTGTCTTCAACTGCACAGGTAGGAATGTGTATGATTTTTGTTCAAGATATTATAAAGTTGACAACTTTCGTTCAACTTATTCGGAATCCATAACCACTGTGGCGGTGCCTTTCAAGCCTTTGGATAGTGATAAAATTGACTCAGAGGCCGAGAATGTACTTCCTCCTTCCATCTCCAGGCCACAAAGCCATGATAAGGAAAAACAGAAGAAAACAAAGGGTGTGGCAAAAAAGGAAGTGTTCTGCTCAAACTGCAAGGAAACAGGACATAATAAAGCTACATGCAAGGCAGGCTCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Myb_DNA-bind_3

Protein Analysis

939

Amino Acids

104.34

Weight (kDa)

6.05

Isoelectric Point (pI)

42.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PB1 PF00564 24 - 90 2.1e-06 PB1 domain
DBD_Tnp_Mut PF03108 371 - 435 3.8e-18 MuDR family transposase
MULE PF10551 565 - 656 1.9e-14 MULE transposase domain
SWIM PF04434 817 - 845 7.6e-08 SWIM zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000064)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04090 FvH4_1g04091 FvH4_1g04110 FvH4_1g04440 FvH4_1g05330 FvH4_1g05332 FvH4_1g05560 FvH4_1g05580 FvH4_1g05590 FvH4_1g05611 FvH4_1g05892 FvH4_1g05900 FvH4_1g06763 FvH4_1g17860 FvH4_1g17860 FvH4_1g17861 FvH4_1g17880 FvH4_1g17902 FvH4_2g08142 FvH4_2g25110 FvH4_2g34380 FvH4_3g19131 FvH4_3g20501 FvH4_4g02770 FvH4_4g02771 FvH4_4g17610 FvH4_4g26951 FvH4_4g28330 FvH4_4g29110 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29690 FvH4_4g29691 FvH4_4g30221 FvH4_4g30230 FvH4_4g30240 FvH4_4g30602 FvH4_4g30610 FvH4_6g01351 FvH4_6g01780 FvH4_6g01890 FvH4_6g47150 FvH4_6g52260 FvH4_6g52703 FvH4_7g23210 FvH4_7g23240 FvH4_7g23350 FvH4_7g28790 FvH4_7g28820 FvH4_7g28830 FvH4_7g28840 FvH4_7g28890 FvH4_7g29040 FvH4_7g29050 FvH4_7g29990 FvH4_7g33871 FvH4_c6g00090
malus_domestica MD01G1180800.v1.1 MD01G1199400.v1.1 MD02G1310000.v1.1 MD04G1097400.v1.1 MD07G1264800.v1.1 MD07G1264900.v1.1 MD07G1270200.v1.1 MD07G1270300.v1.1 MD07G1270500.v1.1 MD10G1043600.v1.1 MD13G1047500.v1.1 MD13G1075200.v1.1
prunus_persica Prupe.1G009400_v2.0.a1 Prupe.1G076100_v2.0.a1 Prupe.1G158300_v2.0.a1 Prupe.1G208900_v2.0.a1 Prupe.1G273900_v2.0.a1 Prupe.2G253900_v2.0.a1 Prupe.2G255700_v2.0.a1 Prupe.2G256000_v2.0.a1 Prupe.2G280300_v2.0.a1 Prupe.2G290700_v2.0.a1 Prupe.3G068500_v2.0.a1 Prupe.4G112800_v2.0.a1 Prupe.5G168600_v2.0.a1 Prupe.5G168800_v2.0.a1 Prupe.5G169100_v2.0.a1 Prupe.8G049800_v2.0.a1
pyrus_communis pycom01g19330 pycom01g20930 pycom01g22010 pycom01g22020 pycom02g26090 pycom07g24330 pycom07g24720 pycom13g04150 pycom420g01320
rosa_chinensis RchiOBHm_Chr1g0324121 RchiOBHm_Chr1g0324251 RchiOBHm_Chr1g0343741 RchiOBHm_Chr1g0355031 RchiOBHm_Chr1g0359461 RchiOBHm_Chr1g0376351 RchiOBHm_Chr1g0376381 RchiOBHm_Chr2g0092531 RchiOBHm_Chr2g0108311 RchiOBHm_Chr2g0108321 RchiOBHm_Chr2g0108331 RchiOBHm_Chr2g0133991 RchiOBHm_Chr2g0156691 RchiOBHm_Chr2g0173801 RchiOBHm_Chr3g0449701 RchiOBHm_Chr3g0449861 RchiOBHm_Chr4g0417201 RchiOBHm_Chr4g0417931 RchiOBHm_Chr4g0424551 RchiOBHm_Chr4g0442921 RchiOBHm_Chr4g0442931 RchiOBHm_Chr5g0032171 RchiOBHm_Chr5g0032191 RchiOBHm_Chr5g0032221 RchiOBHm_Chr6g0258051 RchiOBHm_Chr6g0277851 RchiOBHm_Chr6g0291671 RchiOBHm_Chr6g0291691 RchiOBHm_Chr6g0312761 RchiOBHm_Chr7g0223801 RchiOBHm_Chr7g0224141
rosa_laevigata RLG00000001917 RLG00000001951 RLG00000005804 RLG00000006309 RLG00000006344 RLG00000006458 RLG00000016168 RLG00000016259 RLG00000016305 RLG00000016306 RLG00000019810 RLG00000022223 RLG00000026077 RLG00000026607 RLG00000029703 RLG00000033364 RLG00000034633 RLG00000034637
rosa_multiflora Rmu_co8010764.1_g000001 Rmu_co8262143.1_g000001 Rmu_co8346175.1_g000001 Rmu_sc0000096.1_g000016 Rmu_sc0000544.1_g000003 Rmu_sc0000591.1_g000007 Rmu_sc0000756.1_g000029 Rmu_sc0000841.1_g000017 Rmu_sc0000907.1_g000020 Rmu_sc0000954.1_g000004 Rmu_sc0001195.1_g000007 Rmu_sc0001198.1_g000008 Rmu_sc0001201.1_g000011 Rmu_sc0001201.1_g000013 Rmu_sc0001782.1_g000035 Rmu_sc0001904.1_g000004 Rmu_sc0001962.1_g000039 Rmu_sc0002113.1_g000021 Rmu_sc0002226.1_g000017 Rmu_sc0002226.1_g000020 Rmu_sc0002327.1_g000005 Rmu_sc0002372.1_g000010 Rmu_sc0002372.1_g000014 Rmu_sc0002687.1_g000005 Rmu_sc0003031.1_g000019 Rmu_sc0003076.1_g000014 Rmu_sc0004296.1_g000009 Rmu_sc0004540.1_g000009 Rmu_sc0005369.1_g000002 Rmu_sc0005375.1_g000003 Rmu_sc0005375.1_g000013 Rmu_sc0005742.1_g000008 Rmu_sc0005742.1_g000015 Rmu_sc0005742.1_g000021 Rmu_sc0007419.1_g000011 Rmu_sc0008909.1_g000008 Rmu_sc0010556.1_g000018 Rmu_sc0010999.1_g000008 Rmu_sc0017510.1_g000003 Rmu_sc0017556.1_g000001 Rmu_sc0017900.1_g000007 Rmu_sc0024249.1_g000001 Rmu_sc0032377.1_g000001 Rmu_sc0033569.1_g000001 Rmu_sc0036457.1_g000001 Rmu_sc0041304.1_g000001 Rmu_ssc0000204.1_g000011 Rmu_ssc0000438.1_g000056
rosa_roxburghii Rroxscaffold_1G00048250 Rroxscaffold_1G00048290 Rroxscaffold_2G00092800 Rroxscaffold_2G00110580 Rroxscaffold_2G00135240 Rroxscaffold_2G00135260 Rroxscaffold_2G00135300 Rroxscaffold_2G00149010 Rroxscaffold_2G00149160 Rroxscaffold_2G00149170 Rroxscaffold_2G00149630 Rroxscaffold_2G00151760 Rroxscaffold_2G00151790 Rroxscaffold_2G00152170 Rroxscaffold_3G00225510 Rroxscaffold_3G00249210 Rroxscaffold_4G00277020 Rroxscaffold_4G00281760 Rroxscaffold_4G00281770 Rroxscaffold_4G00281810 Rroxscaffold_4G00281820 Rroxscaffold_4G00282160 Rroxscaffold_4G00310340 Rroxscaffold_5G00361040 Rroxscaffold_5G00363770 Rroxscaffold_5G00366460 Rroxscaffold_5G00378270 Rroxscaffold_5G00378310 Rroxscaffold_5G00379550 Rroxscaffold_5G00379650 Rroxscaffold_6G00422110 Rroxscaffold_6G00427680 Rroxscaffold_7G00175850 Rroxscaffold_7G00175860 Rroxscaffold_7G00190720 Rroxscaffold_7G00190750 Rroxscaffold_7G00190830 Rroxscaffold_7G00196820
rosa_rugosa Rorug01G0395900 Rorug01G0444400 Rorug01G0488100 Rorug02G0001700 Rorug02G0021600 Rorug02G0025700 Rorug02G0152200 Rorug02G0271300 Rorug02G0455800 Rorug02G0572800 Rorug02G0576000 Rorug04G0146300 Rorug04G0172200 Rorug04G0172400 Rorug04G0311300 Rorug04G0312200 Rorug04G0312300 Rorug05G0129500 Rorug05G0129700 Rorug05G0250600 Rorug06G0112600 Rorug06G0220700 Rorug06G0220800 Rorug07G0114600
rosa_samantha Rh1DG066700 Rh1DG081800 Rh1DG184300 Rh1DG401900 Rh1DG402700 Rh1DG407000 Rh1DG407600 Rh2AG200800 Rh2AG201000 Rh2AG521000 Rh2BG066200 Rh2BG066300 Rh2BG073900 Rh2BG373500 Rh2BG417600 Rh2BG662600 Rh2DG066200 Rh2DG072000 Rh2DG390000 Rh2DG677700 Rh3CG020200 Rh3CG021500 Rh3CG081200 Rh4AG209600 Rh4AG362600 Rh4AG362700 Rh4AG397200 Rh4BG209800 Rh4BG209900 Rh4BG210000 Rh4CG220800 Rh4CG271300 Rh4CG388000 Rh4DG029800 Rh4DG368700 Rh4DG403900 Rh5AG035900 Rh5BG034600 Rh5BG034900 Rh5DG228700 Rh5DG228800 Rh6AG355900 Rh6CG083600 Rh6CG229000 Rh6CG229100 Rh6CG229700 Rh6CG346500 Rh6CG346600 Rh7AG362300 Rh7AG362400 Rh7AG363200 Rh7AG365100 Rh7CG380900 Rh7CG381000 Rh7CG381600 Rh7DG437600
rosa_wichuraiana Rw0G004580 Rw0G004590 Rw0G005750 Rw0G006640 Rw0G007050 Rw0G008040 Rw0G012200 Rw0G013750 Rw0G016590 Rw1G006090 Rw1G012040 Rw1G036130 Rw1G036270 Rw1G036290 Rw1G036420 Rw1G036430 Rw1G036590 Rw2G003560 Rw2G005130 Rw2G005980 Rw2G006090 Rw2G015980 Rw2G016000 Rw2G043010 Rw2G053520 Rw4G018760 Rw4G022000 Rw4G034250 Rw5G003280 Rw5G020380 Rw5G020390 Rw6G008210 Rw6G031000 Rw7G030830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1530, 2574
AarI CACCTGC 1 cut(s) 770
Acc36I ACCTGC 2 cut(s) 299, 770
AccB1I GGYRCC 1 cut(s) 2626
AccB7I CCANNNNNTGG 3 cut(s) 703, 799, 2003
AccI GTMKAC 2 cut(s) 1800, 2327
AccII CGCG 1 cut(s) 1155
AciI CCGC 3 cut(s) 480, 2381, 2624
AclWI GGATC 4 cut(s) 999, 1845, 2391, 2460
AcsI RAATTY 4 cut(s) 44, 1148, 1263, 1349
AcuI CTGAAG 5 cut(s) 387, 1101, 1266, 1433, 1439
AdeI CACNNNGTG 2 cut(s) 467, 1098
AfaI GTAC 4 cut(s) 400, 1161, 1485, 2679
AfiI CCNNNNNNNGG 9 cut(s) 573, 703, 799, 1045, 1257, 2003, 2253, 2697, 2716
AflIII ACRYGT 1 cut(s) 1328
AgeI ACCGGT 1 cut(s) 662
AjnI CCWGG 5 cut(s) 199, 1274, 1343, 1585, 2696
Alw21I GWGCWC 1 cut(s) 2178
Alw26I GTCTC 4 cut(s) 942, 1640, 1727, 2201
AlwI GGATC 4 cut(s) 999, 1845, 2391, 2460
AlwNI CAGNNNCTG 2 cut(s) 980, 1751
AoxI GGCC 6 cut(s) 883, 1057, 1991, 2497, 2667, 2699
ApeKI GCWGC 9 cut(s) 389, 680, 776, 860, 1745, 2042, 2045, 2359, 2508
ApoI RAATTY 4 cut(s) 44, 1148, 1263, 1349
AseI ATTAAT 1 cut(s) 2442
AsiGI ACCGGT 1 cut(s) 662
Asp700I GAANNNNTTC 3 cut(s) 1647, 2017, 2311
AspLEI GCGC 2 cut(s) 587, 855
AspS9I GGNCC 5 cut(s) 875, 884, 1058, 1992, 2125
AsuC2I CCSGG 1 cut(s) 1781
AsuHPI GGTGA 3 cut(s) 444, 1625, 2183
AvaII GGWCC 2 cut(s) 875, 2125
BanI GGYRCC 1 cut(s) 2626
BauI CACGAG 1 cut(s) 1730
BbsI GAAGAC 1 cut(s) 2518
Bbv12I GWGCWC 1 cut(s) 2178
BbvI GCAGC 9 cut(s) 376, 667, 763, 847, 1757, 2029, 2032, 2346, 2495
BceAI ACGGC 2 cut(s) 997, 1502
BciT130I CCWGG 5 cut(s) 201, 1276, 1345, 1587, 2698
BclI TGATCA 1 cut(s) 631
BcnI CCSGG 1 cut(s) 1781
BcoDI GTCTC 4 cut(s) 942, 1640, 1727, 2201
BfaI CTAG 1 cut(s) 1055
BfmI CTRYAG 2 cut(s) 777, 2328
BfuAI ACCTGC 2 cut(s) 299, 770
BglI GCCNNNNNGGC 1 cut(s) 1944
BisI GCNGC 9 cut(s) 390, 681, 777, 861, 1746, 2043, 2046, 2360, 2509
BlsI GCNGC 9 cut(s) 391, 682, 778, 862, 1747, 2044, 2047, 2361, 2510
BmcAI AGTACT 1 cut(s) 400
Bme1390I CCNGG 6 cut(s) 201, 1276, 1345, 1587, 1781, 2698
Bme18I GGWCC 2 cut(s) 875, 2125
BmgT120I GGNCC 5 cut(s) 875, 884, 1058, 1992, 2125
BmiI GGNNCC 6 cut(s) 67, 667, 763, 1994, 2126, 2628
BmrFI CCNGG 6 cut(s) 201, 1276, 1345, 1587, 1781, 2698
BmrI ACTGGG 3 cut(s) 1125, 2044, 2131
BmsI GCATC 7 cut(s) 79, 192, 307, 415, 676, 1280, 1492
BmuI ACTGGG 3 cut(s) 1125, 2044, 2131
BpiI GAAGAC 1 cut(s) 2518
BpmI CTGGAG 5 cut(s) 379, 495, 957, 1925, 2680
BpuEI CTTGAG 3 cut(s) 119, 1464, 2008
BpuMI CCSGG 1 cut(s) 1781
BsaBI GATNNNNATC 2 cut(s) 108, 429
BsaJI CCNNGG 5 cut(s) 199, 265, 1275, 1553, 1942
BsaWI WCCGGW 1 cut(s) 662
Bsc4I CCNNNNNNNGG 9 cut(s) 573, 703, 799, 1045, 1257, 2003, 2253, 2697, 2716
Bse118I RCCGGY 1 cut(s) 662
Bse3DI GCAATG 2 cut(s) 1176, 2240
Bse8I GATNNNNATC 2 cut(s) 108, 429
BseBI CCWGG 5 cut(s) 201, 1276, 1345, 1587, 2698
BseDI CCNNGG 5 cut(s) 199, 265, 1275, 1553, 1942
BseGI GGATG 6 cut(s) 64, 258, 1271, 1357, 1624, 1765
BseJI GATNNNNATC 2 cut(s) 108, 429
BseLI CCNNNNNNNGG 9 cut(s) 573, 703, 799, 1045, 1257, 2003, 2253, 2697, 2716
BseMI GCAATG 2 cut(s) 1176, 2240
BseMII CTCAG 4 cut(s) 1797, 1911, 1958, 2676
BseRI GAGGAG 1 cut(s) 99
BseXI GCAGC 9 cut(s) 376, 667, 763, 847, 1757, 2029, 2032, 2346, 2495
BsgI GTGCAG 2 cut(s) 805, 2518
Bsh1236I CGCG 1 cut(s) 1155
Bsh1285I CGRYCG 1 cut(s) 663
BshFI GGCC 6 cut(s) 885, 1059, 1993, 2499, 2669, 2701
BshNI GGYRCC 1 cut(s) 2626
BshTI ACCGGT 1 cut(s) 662
BsiEI CGRYCG 1 cut(s) 663
BsiHKAI GWGCWC 1 cut(s) 2178
BsiSI CCGG 2 cut(s) 663, 1781
BslFI GGGAC 3 cut(s) 503, 589, 1292
BslI CCNNNNNNNGG 9 cut(s) 573, 703, 799, 1045, 1257, 2003, 2253, 2697, 2716
BsmAI GTCTC 4 cut(s) 942, 1640, 1727, 2201
BsmBI CGTCTC 2 cut(s) 942, 1640
BsmFI GGGAC 3 cut(s) 503, 589, 1292
BsmI GAATGC 2 cut(s) 1443, 1649
BsnI GGCC 6 cut(s) 885, 1059, 1993, 2499, 2669, 2701
Bsp1286I GDGCHC 1 cut(s) 2178
Bsp143I GATC 8 cut(s) 130, 631, 991, 1837, 1847, 2086, 2383, 2452
Bsp19I CCATGG 1 cut(s) 1942
Bsp68I TCGCGA 1 cut(s) 1155
BspACI CCGC 3 cut(s) 480, 2381, 2624
BspANI GGCC 6 cut(s) 885, 1059, 1993, 2499, 2669, 2701
BspCNI CTCAG 4 cut(s) 1798, 1912, 1959, 2675
BspFNI CGCG 1 cut(s) 1155
BspHI TCATGA 2 cut(s) 112, 1144
BspLI GGNNCC 6 cut(s) 67, 667, 763, 1994, 2126, 2628
BspMAI CTGCAG 1 cut(s) 781
BspMI ACCTGC 2 cut(s) 299, 770
BspPI GGATC 4 cut(s) 999, 1845, 2391, 2460
BspT107I GGYRCC 1 cut(s) 2626
BsrDI GCAATG 2 cut(s) 1176, 2240
BsrFI RCCGGY 1 cut(s) 662
BssAI RCCGGY 1 cut(s) 662
BssECI CCNNGG 5 cut(s) 199, 265, 1275, 1553, 1942
BssMI GATC 8 cut(s) 130, 631, 991, 1837, 1847, 2086, 2383, 2452
BssSI CACGAG 1 cut(s) 1730
BssT1I CCWWGG 2 cut(s) 1553, 1942
Bst2BI CACGAG 1 cut(s) 1730
Bst2UI CCWGG 5 cut(s) 201, 1276, 1345, 1587, 2698
Bst4CI ACNGT 7 cut(s) 838, 955, 1223, 1468, 1869, 2194, 2620
Bst6I CTCTTC 2 cut(s) 996, 1077
BstAPI GCANNNNNTGC 1 cut(s) 1751
BstC8I GCNNGC 3 cut(s) 550, 2238, 2812
BstDEI CTNAG 8 cut(s) 1806, 1920, 1967, 2027, 2277, 2346, 2662, 2817
BstDSI CCRYGG 2 cut(s) 265, 1942
BstF5I GGATG 6 cut(s) 64, 258, 1271, 1357, 1624, 1765
BstFNI CGCG 1 cut(s) 1155
BstHHI GCGC 2 cut(s) 587, 855
BstKTI GATC 8 cut(s) 133, 634, 994, 1840, 1850, 2089, 2386, 2455
BstMAI GTCTC 4 cut(s) 942, 1640, 1727, 2201
BstMBI GATC 8 cut(s) 130, 631, 991, 1837, 1847, 2086, 2383, 2452
BstMCI CGRYCG 1 cut(s) 663
BstNI CCWGG 5 cut(s) 201, 1276, 1345, 1587, 2698
BstNSI RCATGY 5 cut(s) 98, 354, 1332, 2114, 2805
BstSCI CCNGG 6 cut(s) 199, 1274, 1343, 1585, 1779, 2696
BstSFI CTRYAG 2 cut(s) 777, 2328
BstUI CGCG 1 cut(s) 1155
BstV1I GCAGC 9 cut(s) 376, 667, 763, 847, 1757, 2029, 2032, 2346, 2495
BstV2I GAAGAC 1 cut(s) 2518
BstX2I RGATCY 1 cut(s) 2452
BstXI CCANNNNNNTGG 1 cut(s) 38
BstYI RGATCY 1 cut(s) 2452
BsuRI GGCC 6 cut(s) 885, 1059, 1993, 2499, 2669, 2701
BtgI CCRYGG 2 cut(s) 265, 1942
BtgZI GCGATG 1 cut(s) 1170
BtsCI GGATG 6 cut(s) 64, 258, 1271, 1357, 1624, 1765
BtsI GCAGTG 1 cut(s) 855
BtsIMutI CAGTG 9 cut(s) 38, 238, 855, 1113, 1473, 1608, 1803, 2190, 2616
BtuMI TCGCGA 1 cut(s) 1155
BveI ACCTGC 2 cut(s) 299, 770
Cac8I GCNNGC 3 cut(s) 550, 2238, 2812
CaiI CAGNNNCTG 2 cut(s) 980, 1751
CciI TCATGA 2 cut(s) 112, 1144
CfoI GCGC 2 cut(s) 587, 855
Cfr10I RCCGGY 1 cut(s) 662
Cfr13I GGNCC 5 cut(s) 875, 884, 1058, 1992, 2125
CseI GACGC 1 cut(s) 1622
Csp6I GTAC 4 cut(s) 399, 1160, 1484, 2678
CspAI ACCGGT 1 cut(s) 662
CspCI CAANNNNNGTGG 4 cut(s) 576, 611, 2724, 2759
CviQI GTAC 4 cut(s) 399, 1160, 1484, 2678
DdeI CTNAG 8 cut(s) 1806, 1920, 1967, 2027, 2277, 2346, 2662, 2817
DpnI GATC 8 cut(s) 132, 633, 993, 1839, 1849, 2088, 2385, 2454
DpnII GATC 8 cut(s) 130, 631, 991, 1837, 1847, 2086, 2383, 2452
DraIII CACNNNGTG 2 cut(s) 467, 1098
Eam1104I CTCTTC 2 cut(s) 996, 1077
EarI CTCTTC 2 cut(s) 996, 1077
Eco130I CCWWGG 2 cut(s) 1553, 1942
Eco32I GATATC 1 cut(s) 106
Eco47I GGWCC 2 cut(s) 875, 2125
Eco57I CTGAAG 5 cut(s) 387, 1101, 1266, 1433, 1439
EcoO109I RGGNCCY 2 cut(s) 1992, 2125
EcoRI GAATTC 2 cut(s) 44, 1263
EcoRII CCWGG 5 cut(s) 199, 1274, 1343, 1585, 2696
EcoRV GATATC 1 cut(s) 106
EcoT14I CCWWGG 2 cut(s) 1553, 1942
ErhI CCWWGG 2 cut(s) 1553, 1942
Esp3I CGTCTC 2 cut(s) 942, 1640
FalI AAGNNNNNCTT 2 cut(s) 1970, 2002
FaqI GGGAC 3 cut(s) 503, 589, 1292
FauNDI CATATG 1 cut(s) 1235
FbaI TGATCA 1 cut(s) 631
FblI GTMKAC 2 cut(s) 1800, 2327
Fnu4HI GCNGC 9 cut(s) 390, 681, 777, 861, 1746, 2043, 2046, 2360, 2509
FokI GGATG 6 cut(s) 71, 265, 1258, 1344, 1631, 1772
Fsp4HI GCNGC 9 cut(s) 390, 681, 777, 861, 1746, 2043, 2046, 2360, 2509
FspBI CTAG 1 cut(s) 1055
GlaI GCGC 2 cut(s) 586, 854
GluI GCNGC 9 cut(s) 390, 681, 777, 861, 1746, 2043, 2046, 2360, 2509
GsuI CTGGAG 5 cut(s) 379, 495, 957, 1925, 2680
HaeIII GGCC 6 cut(s) 885, 1059, 1993, 2499, 2669, 2701
HapII CCGG 2 cut(s) 663, 1781
HgaI GACGC 1 cut(s) 1622
HhaI GCGC 2 cut(s) 587, 855
Hin6I GCGC 2 cut(s) 585, 853
HinP1I GCGC 2 cut(s) 585, 853
HincII GTYRAC 2 cut(s) 958, 2581
HindII GTYRAC 2 cut(s) 958, 2581
HindIII AAGCTT 1 cut(s) 1972
HpaII CCGG 2 cut(s) 663, 1781
HphI GGTGA 3 cut(s) 444, 1625, 2183
Hpy166II GTNNAC 8 cut(s) 697, 793, 958, 1134, 1471, 1801, 2328, 2581
Hpy188I TCNGA 9 cut(s) 942, 1081, 1362, 1419, 1674, 1968, 2060, 2605, 2665
Hpy8I GTNNAC 8 cut(s) 697, 793, 958, 1134, 1471, 1801, 2328, 2581
HpyAV CCTTC 7 cut(s) 49, 531, 566, 843, 1328, 1973, 2697
HpyCH4III ACNGT 7 cut(s) 838, 955, 1223, 1468, 1869, 2194, 2620
HpyCH4IV ACGT 2 cut(s) 708, 935
HpyF3I CTNAG 8 cut(s) 1806, 1920, 1967, 2027, 2277, 2346, 2662, 2817
HpySE526I ACGT 2 cut(s) 708, 935
HspAI GCGC 2 cut(s) 585, 853
Ksp22I TGATCA 1 cut(s) 631
Kzo9I GATC 8 cut(s) 130, 631, 991, 1837, 1847, 2086, 2383, 2452
LmnI GCTCC 2 cut(s) 541, 976
Lsp1109I GCAGC 9 cut(s) 376, 667, 763, 847, 1757, 2029, 2032, 2346, 2495
LweI GCATC 7 cut(s) 79, 192, 307, 415, 676, 1280, 1492
MaeI CTAG 1 cut(s) 1055
MaeII ACGT 2 cut(s) 708, 935
MaeIII GTNAC 7 cut(s) 277, 376, 1090, 1548, 1915, 2052, 2373
MalI GATC 8 cut(s) 132, 633, 993, 1839, 1849, 2088, 2385, 2454
MboI GATC 8 cut(s) 130, 631, 991, 1837, 1847, 2086, 2383, 2452
MfeI CAATTG 1 cut(s) 456
MflI RGATCY 1 cut(s) 2452
MhlI GDGCHC 1 cut(s) 2178
MlyI GAGTC 7 cut(s) 365, 373, 571, 716, 1274, 1349, 2654
MmeI TCCRAC 3 cut(s) 1102, 2083, 2129
MroXI GAANNNNTTC 3 cut(s) 1647, 2017, 2311
MslI CAYNNNNRTG 4 cut(s) 270, 423, 1329, 2007
MspA1I CMGCKG 2 cut(s) 407, 1853
MspI CCGG 2 cut(s) 663, 1781
MspR9I CCNGG 6 cut(s) 201, 1276, 1345, 1587, 1781, 2698
MunI CAATTG 1 cut(s) 456
Mva1269I GAATGC 2 cut(s) 1443, 1649
MvaI CCWGG 5 cut(s) 201, 1276, 1345, 1587, 2698
MvnI CGCG 1 cut(s) 1155
NciI CCSGG 1 cut(s) 1781
NcoI CCATGG 1 cut(s) 1942
NdeI CATATG 1 cut(s) 1235
NdeII GATC 8 cut(s) 130, 631, 991, 1837, 1847, 2086, 2383, 2452
NlaIV GGNNCC 6 cut(s) 67, 667, 763, 1994, 2126, 2628
NmeAIII GCCGAG 1 cut(s) 2695
NmuCI GTSAC 4 cut(s) 376, 1090, 1915, 2052
NruI TCGCGA 1 cut(s) 1155
NspI RCATGY 5 cut(s) 98, 354, 1332, 2114, 2805
PagI TCATGA 2 cut(s) 112, 1144
PaqCI CACCTGC 1 cut(s) 770
PciI ACATGT 1 cut(s) 1328
PctI GAATGC 2 cut(s) 1443, 1649
PdmI GAANNNNTTC 3 cut(s) 1647, 2017, 2311
PfeI GAWTC 4 cut(s) 1703, 2312, 2435, 2606
PflFI GACNNNGTC 1 cut(s) 2123
PflMI CCANNNNNTGG 3 cut(s) 703, 799, 2003
PfoI TCCNGGA 1 cut(s) 1343
PinAI ACCGGT 1 cut(s) 662
PkrI GCNGC 9 cut(s) 391, 682, 778, 862, 1747, 2044, 2047, 2361, 2510
PleI GAGTC 7 cut(s) 365, 373, 571, 716, 1274, 1348, 2654
PpsI GAGTC 7 cut(s) 365, 373, 571, 716, 1274, 1348, 2654
PpuMI RGGWCCY 1 cut(s) 2125
PscI ACATGT 1 cut(s) 1328
PshBI ATTAAT 1 cut(s) 2442
PsiI TTATAA 2 cut(s) 1530, 2574
Psp5II RGGWCCY 1 cut(s) 2125
Psp6I CCWGG 5 cut(s) 199, 1274, 1343, 1585, 2696
PspGI CCWGG 5 cut(s) 199, 1274, 1343, 1585, 2696
PspN4I GGNNCC 6 cut(s) 67, 667, 763, 1994, 2126, 2628
PspPI GGNCC 5 cut(s) 875, 884, 1058, 1992, 2125
PspPPI RGGWCCY 1 cut(s) 2125
PstI CTGCAG 1 cut(s) 781
PstNI CAGNNNCTG 2 cut(s) 980, 1751
PsuI RGATCY 1 cut(s) 2452
PsyI GACNNNGTC 1 cut(s) 2123
PvuII CAGCTG 2 cut(s) 407, 1853
RruI TCGCGA 1 cut(s) 1155
RsaI GTAC 4 cut(s) 400, 1161, 1485, 2679
RsaNI GTAC 4 cut(s) 399, 1160, 1484, 2678
RseI CAYNNNNRTG 4 cut(s) 270, 423, 1329, 2007
SatI GCNGC 9 cut(s) 390, 681, 777, 861, 1746, 2043, 2046, 2360, 2509
Sau3AI GATC 8 cut(s) 130, 631, 991, 1837, 1847, 2086, 2383, 2452
Sau96I GGNCC 5 cut(s) 875, 884, 1058, 1992, 2125
ScaI AGTACT 1 cut(s) 400
SchI GAGTC 7 cut(s) 365, 373, 571, 716, 1274, 1349, 2654
ScrFI CCNGG 6 cut(s) 201, 1276, 1345, 1587, 1781, 2698
SduI GDGCHC 1 cut(s) 2178
SfaNI GCATC 7 cut(s) 79, 192, 307, 415, 676, 1280, 1492
SfcI CTRYAG 2 cut(s) 777, 2328
SinI GGWCC 2 cut(s) 875, 2125
SmiMI CAYNNNNRTG 4 cut(s) 270, 423, 1329, 2007
SmlI CTYRAG 3 cut(s) 134, 1479, 1987
SmoI CTYRAG 3 cut(s) 134, 1479, 1987
SsiI CCGC 3 cut(s) 480, 2381, 2624
SspI AATATT 1 cut(s) 1597
SspMI CTAG 1 cut(s) 1055
StyD4I CCNGG 6 cut(s) 199, 1274, 1343, 1585, 1779, 2696
StyI CCWWGG 2 cut(s) 1553, 1942
TaaI ACNGT 7 cut(s) 838, 955, 1223, 1468, 1869, 2194, 2620
TaiI ACGT 2 cut(s) 711, 938
TaqI TCGA 2 cut(s) 2196, 2305
TatI WGTACW 3 cut(s) 398, 1159, 2677
TfiI GAWTC 4 cut(s) 1703, 2312, 2435, 2606
TscAI CASTG 9 cut(s) 38, 238, 862, 1120, 1473, 1615, 1810, 2197, 2623
TseFI GTSAC 4 cut(s) 376, 1090, 1915, 2052
TseI GCWGC 9 cut(s) 389, 680, 776, 860, 1745, 2042, 2045, 2359, 2508
Tsp45I GTSAC 4 cut(s) 376, 1090, 1915, 2052
TspDTI ATGAA 8 cut(s) 129, 1133, 1161, 1640, 1991, 2094, 2304, 2417
TspGWI ACGGA 1 cut(s) 2269
TspRI CASTG 9 cut(s) 38, 238, 862, 1120, 1473, 1615, 1810, 2197, 2623
Tth111I GACNNNGTC 1 cut(s) 2123
Van91I CCANNNNNTGG 3 cut(s) 703, 799, 2003
VpaK11BI GGWCC 2 cut(s) 875, 2125
VspI ATTAAT 1 cut(s) 2442
XapI RAATTY 4 cut(s) 44, 1148, 1263, 1349
XceI RCATGY 5 cut(s) 98, 354, 1332, 2114, 2805
XcmI CCANNNNNNNNNTGG 2 cut(s) 2446, 2617
XmiI GTMKAC 2 cut(s) 1800, 2327
XmnI GAANNNNTTC 3 cut(s) 1647, 2017, 2311
XspI CTAG 1 cut(s) 1055
ZrmI AGTACT 1 cut(s) 400
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.