Rroxscaffold_4G00281810

Protein of unknown function (DUF295)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000064
Physical Location & Seq
Reverse (-)
4018594 .. 4019652
1059 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00281810.1

Sequence Viewer

Length: 1059 bp
ATGGACTCCTCAGAGTGGGCAAAGCTGCCAAAGCACCTATTGGATTCAGTTTTTGATAATCTAAGCAAACGCACAGCTCCAATGCTCTTGGCTTATACGGGTGAAGAAGACACATGGAATTTATGCGATGTCGCGGATGATAAGGTTCTTGATTTGCAATTAGAGTTGCCGAACAAACGATTTTGTGGTTCTAGAGGATGGTTAATAACTATGGATGAGAATTTCATAGTGACTCTCGTAAATCCTTTCTCTAGAGTTAATGGGAGACCGAAAGAAAATTCTATTATCAACCTTCCTGCACTCTTGACTCGTGGGAAAAGGCTTAAGCAATGTGACCTGAATATCTTCAAGGCTACAATTTCGGCGGATCCAATCTCAAATGCAAAGGATTGCATTGTTATGATCATATACGAGCCATCATGTCAACTGGCTTTTATCAGACTTAATAAAGACACTACGTGGACTTATATTGATTCACGACGTCGCATGATTGAAGATGTTCTTTTTGTTGGGGATAAATTCTATGCTGTTGATTATAAAAGCCAACTCTTTTCCATTGACATTACTACTCAATTTGATGAGGAGGAAGATGTTATATTGGTTGCAGAAGAAGCATTTGAACAAGATAAGAGATATTTAGTCAAACATTATCTGGTGGAATTAAGTGAGAATGAACTATTGATGGTTAAGAGGTATATGTACTTTGCTCCTGGTCAACATGATTTCCGTATGACATTGAATTTCGAACTTTTCAAACTTGATCACGATAATTGTGAGTGGACCAAGATAAACACTTTAGGTGATGTTGCTGTCTTCATAGGGGACAGCTCTACAATATCAGTGTTGGCCTCAAGTTCTCTTGGATATCTGCCGAACTGCATATACTTCCTACATGATTGGGATCGTCAGAGAATTGATTTTGGGAGTCGTGGTCCACGTGATTTTGGTGTGTATAACATTGAAAGCAAAAAATTTTCACGGGATGTCACCACACATGCTGCGGCTCTAATGAAGATGAGCAATCGAACACCTATTTGGACACAATGGACTGTGTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295

Protein Analysis

352

Amino Acids

40.82

Weight (kDa)

5.22

Isoelectric Point (pI)

42.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_KIB1-4 PF03478 44 - 319 7.7e-49 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000064)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04090 FvH4_1g04091 FvH4_1g04110 FvH4_1g04440 FvH4_1g05330 FvH4_1g05332 FvH4_1g05560 FvH4_1g05580 FvH4_1g05590 FvH4_1g05611 FvH4_1g05892 FvH4_1g05900 FvH4_1g06763 FvH4_1g17860 FvH4_1g17860 FvH4_1g17861 FvH4_1g17880 FvH4_1g17902 FvH4_2g08142 FvH4_2g25110 FvH4_2g34380 FvH4_3g19131 FvH4_3g20501 FvH4_4g02770 FvH4_4g02771 FvH4_4g17610 FvH4_4g26951 FvH4_4g28330 FvH4_4g29110 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29690 FvH4_4g29691 FvH4_4g30221 FvH4_4g30230 FvH4_4g30240 FvH4_4g30602 FvH4_4g30610 FvH4_6g01351 FvH4_6g01780 FvH4_6g01890 FvH4_6g47150 FvH4_6g52260 FvH4_6g52703 FvH4_7g23210 FvH4_7g23240 FvH4_7g23350 FvH4_7g28790 FvH4_7g28820 FvH4_7g28830 FvH4_7g28840 FvH4_7g28890 FvH4_7g29040 FvH4_7g29050 FvH4_7g29990 FvH4_7g33871 FvH4_c6g00090
malus_domestica MD01G1180800.v1.1 MD01G1199400.v1.1 MD02G1310000.v1.1 MD04G1097400.v1.1 MD07G1264800.v1.1 MD07G1264900.v1.1 MD07G1270200.v1.1 MD07G1270300.v1.1 MD07G1270500.v1.1 MD10G1043600.v1.1 MD13G1047500.v1.1 MD13G1075200.v1.1
prunus_persica Prupe.1G009400_v2.0.a1 Prupe.1G076100_v2.0.a1 Prupe.1G158300_v2.0.a1 Prupe.1G208900_v2.0.a1 Prupe.1G273900_v2.0.a1 Prupe.2G253900_v2.0.a1 Prupe.2G255700_v2.0.a1 Prupe.2G256000_v2.0.a1 Prupe.2G280300_v2.0.a1 Prupe.2G290700_v2.0.a1 Prupe.3G068500_v2.0.a1 Prupe.4G112800_v2.0.a1 Prupe.5G168600_v2.0.a1 Prupe.5G168800_v2.0.a1 Prupe.5G169100_v2.0.a1 Prupe.8G049800_v2.0.a1
pyrus_communis pycom01g19330 pycom01g20930 pycom01g22010 pycom01g22020 pycom02g26090 pycom07g24330 pycom07g24720 pycom13g04150 pycom420g01320
rosa_chinensis RchiOBHm_Chr1g0324121 RchiOBHm_Chr1g0324251 RchiOBHm_Chr1g0343741 RchiOBHm_Chr1g0355031 RchiOBHm_Chr1g0359461 RchiOBHm_Chr1g0376351 RchiOBHm_Chr1g0376381 RchiOBHm_Chr2g0092531 RchiOBHm_Chr2g0108311 RchiOBHm_Chr2g0108321 RchiOBHm_Chr2g0108331 RchiOBHm_Chr2g0133991 RchiOBHm_Chr2g0156691 RchiOBHm_Chr2g0173801 RchiOBHm_Chr3g0449701 RchiOBHm_Chr3g0449861 RchiOBHm_Chr4g0417201 RchiOBHm_Chr4g0417931 RchiOBHm_Chr4g0424551 RchiOBHm_Chr4g0442921 RchiOBHm_Chr4g0442931 RchiOBHm_Chr5g0032171 RchiOBHm_Chr5g0032191 RchiOBHm_Chr5g0032221 RchiOBHm_Chr6g0258051 RchiOBHm_Chr6g0277851 RchiOBHm_Chr6g0291671 RchiOBHm_Chr6g0291691 RchiOBHm_Chr6g0312761 RchiOBHm_Chr7g0223801 RchiOBHm_Chr7g0224141
rosa_laevigata RLG00000001917 RLG00000001951 RLG00000005804 RLG00000006309 RLG00000006344 RLG00000006458 RLG00000016168 RLG00000016259 RLG00000016305 RLG00000016306 RLG00000019810 RLG00000022223 RLG00000026077 RLG00000026607 RLG00000029703 RLG00000033364 RLG00000034633 RLG00000034637
rosa_multiflora Rmu_co8010764.1_g000001 Rmu_co8262143.1_g000001 Rmu_co8346175.1_g000001 Rmu_sc0000096.1_g000016 Rmu_sc0000544.1_g000003 Rmu_sc0000591.1_g000007 Rmu_sc0000756.1_g000029 Rmu_sc0000841.1_g000017 Rmu_sc0000907.1_g000020 Rmu_sc0000954.1_g000004 Rmu_sc0001195.1_g000007 Rmu_sc0001198.1_g000008 Rmu_sc0001201.1_g000011 Rmu_sc0001201.1_g000013 Rmu_sc0001782.1_g000035 Rmu_sc0001904.1_g000004 Rmu_sc0001962.1_g000039 Rmu_sc0002113.1_g000021 Rmu_sc0002226.1_g000017 Rmu_sc0002226.1_g000020 Rmu_sc0002327.1_g000005 Rmu_sc0002372.1_g000010 Rmu_sc0002372.1_g000014 Rmu_sc0002687.1_g000005 Rmu_sc0003031.1_g000019 Rmu_sc0003076.1_g000014 Rmu_sc0004296.1_g000009 Rmu_sc0004540.1_g000009 Rmu_sc0005369.1_g000002 Rmu_sc0005375.1_g000003 Rmu_sc0005375.1_g000013 Rmu_sc0005742.1_g000008 Rmu_sc0005742.1_g000015 Rmu_sc0005742.1_g000021 Rmu_sc0007419.1_g000011 Rmu_sc0008909.1_g000008 Rmu_sc0010556.1_g000018 Rmu_sc0010999.1_g000008 Rmu_sc0017510.1_g000003 Rmu_sc0017556.1_g000001 Rmu_sc0017900.1_g000007 Rmu_sc0024249.1_g000001 Rmu_sc0032377.1_g000001 Rmu_sc0033569.1_g000001 Rmu_sc0036457.1_g000001 Rmu_sc0041304.1_g000001 Rmu_ssc0000204.1_g000011 Rmu_ssc0000438.1_g000056
rosa_roxburghii Rroxscaffold_1G00048250 Rroxscaffold_1G00048290 Rroxscaffold_2G00092800 Rroxscaffold_2G00110580 Rroxscaffold_2G00135240 Rroxscaffold_2G00135260 Rroxscaffold_2G00135300 Rroxscaffold_2G00149010 Rroxscaffold_2G00149160 Rroxscaffold_2G00149170 Rroxscaffold_2G00149630 Rroxscaffold_2G00151760 Rroxscaffold_2G00151790 Rroxscaffold_2G00152170 Rroxscaffold_3G00225510 Rroxscaffold_3G00249210 Rroxscaffold_4G00277020 Rroxscaffold_4G00281760 Rroxscaffold_4G00281770 Rroxscaffold_4G00281810 Rroxscaffold_4G00281820 Rroxscaffold_4G00282160 Rroxscaffold_4G00310340 Rroxscaffold_5G00361040 Rroxscaffold_5G00363770 Rroxscaffold_5G00366460 Rroxscaffold_5G00378270 Rroxscaffold_5G00378310 Rroxscaffold_5G00379550 Rroxscaffold_5G00379650 Rroxscaffold_6G00422110 Rroxscaffold_6G00427680 Rroxscaffold_7G00175850 Rroxscaffold_7G00175860 Rroxscaffold_7G00190720 Rroxscaffold_7G00190750 Rroxscaffold_7G00190830 Rroxscaffold_7G00196820
rosa_rugosa Rorug01G0395900 Rorug01G0444400 Rorug01G0488100 Rorug02G0001700 Rorug02G0021600 Rorug02G0025700 Rorug02G0152200 Rorug02G0271300 Rorug02G0455800 Rorug02G0572800 Rorug02G0576000 Rorug04G0146300 Rorug04G0172200 Rorug04G0172400 Rorug04G0311300 Rorug04G0312200 Rorug04G0312300 Rorug05G0129500 Rorug05G0129700 Rorug05G0250600 Rorug06G0112600 Rorug06G0220700 Rorug06G0220800 Rorug07G0114600
rosa_samantha Rh1DG066700 Rh1DG081800 Rh1DG184300 Rh1DG401900 Rh1DG402700 Rh1DG407000 Rh1DG407600 Rh2AG200800 Rh2AG201000 Rh2AG521000 Rh2BG066200 Rh2BG066300 Rh2BG073900 Rh2BG373500 Rh2BG417600 Rh2BG662600 Rh2DG066200 Rh2DG072000 Rh2DG390000 Rh2DG677700 Rh3CG020200 Rh3CG021500 Rh3CG081200 Rh4AG209600 Rh4AG362600 Rh4AG362700 Rh4AG397200 Rh4BG209800 Rh4BG209900 Rh4BG210000 Rh4CG220800 Rh4CG271300 Rh4CG388000 Rh4DG029800 Rh4DG368700 Rh4DG403900 Rh5AG035900 Rh5BG034600 Rh5BG034900 Rh5DG228700 Rh5DG228800 Rh6AG355900 Rh6CG083600 Rh6CG229000 Rh6CG229100 Rh6CG229700 Rh6CG346500 Rh6CG346600 Rh7AG362300 Rh7AG362400 Rh7AG363200 Rh7AG365100 Rh7CG380900 Rh7CG381000 Rh7CG381600 Rh7DG437600
rosa_wichuraiana Rw0G004580 Rw0G004590 Rw0G005750 Rw0G006640 Rw0G007050 Rw0G008040 Rw0G012200 Rw0G013750 Rw0G016590 Rw1G006090 Rw1G012040 Rw1G036130 Rw1G036270 Rw1G036290 Rw1G036420 Rw1G036430 Rw1G036590 Rw2G003560 Rw2G005130 Rw2G005980 Rw2G006090 Rw2G015980 Rw2G016000 Rw2G043010 Rw2G053520 Rw4G018760 Rw4G022000 Rw4G034250 Rw5G003280 Rw5G020380 Rw5G020390 Rw6G008210 Rw6G031000 Rw7G030830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 537
AatII GACGTC 1 cut(s) 484
AccII CGCG 1 cut(s) 134
AciI CCGC 3 cut(s) 134, 365, 1001
AclWI GGATC 3 cut(s) 362, 375, 909
AcsI RAATTY 6 cut(s) 118, 220, 277, 518, 739, 971
AcvI CACGTG 1 cut(s) 938
AcyI GRCGYC 1 cut(s) 481
AdeI CACNNNGTG 1 cut(s) 459
AfaI GTAC 1 cut(s) 701
AfiI CCNNNNNNNGG 1 cut(s) 15
AflII CTTAAG 1 cut(s) 323
AgsI TTSAA 6 cut(s) 349, 494, 620, 739, 754, 962
AjnI CCWGG 1 cut(s) 709
AjuI GAANNNNNNNTTGG 2 cut(s) 1018, 1050
AluBI AGCT 3 cut(s) 25, 77, 828
AluI AGCT 3 cut(s) 25, 77, 828
Alw26I GTCTC 1 cut(s) 259
AlwI GGATC 3 cut(s) 362, 375, 909
AoxI GGCC 1 cut(s) 846
ApeKI GCWGC 2 cut(s) 25, 998
ApoI RAATTY 6 cut(s) 118, 220, 277, 518, 739, 971
Asp700I GAANNNNTTC 2 cut(s) 344, 498
AspS9I GGNCC 2 cut(s) 780, 932
AsuHPI GGTGA 3 cut(s) 113, 812, 979
AsuII TTCGAA 1 cut(s) 744
AvaII GGWCC 2 cut(s) 780, 932
BamHI GGATCC 1 cut(s) 367
BauI CACGAG 1 cut(s) 309
BbrPI CACGTG 1 cut(s) 938
BbsI GAAGAC 2 cut(s) 114, 805
BbvI GCAGC 2 cut(s) 12, 985
BccI CCATC 3 cut(s) 192, 424, 676
BciT130I CCWGG 1 cut(s) 711
BclI TGATCA 2 cut(s) 402, 760
BcoDI GTCTC 1 cut(s) 259
BfaI CTAG 2 cut(s) 192, 252
BfrI CTTAAG 1 cut(s) 323
BisI GCNGC 3 cut(s) 26, 999, 1002
BlsI GCNGC 3 cut(s) 27, 1000, 1003
Bme1390I CCNGG 1 cut(s) 711
Bme18I GGWCC 2 cut(s) 780, 932
BmgT120I GGNCC 2 cut(s) 780, 932
BmiI GGNNCC 1 cut(s) 369
BmrFI CCNGG 1 cut(s) 711
BpiI GAAGAC 2 cut(s) 114, 805
Bpu14I TTCGAA 1 cut(s) 744
BpuEI CTTGAG 1 cut(s) 835
BsaAI YACGTR 2 cut(s) 459, 938
BsaBI GATNNNNATC 1 cut(s) 900
BsaHI GRCGYC 1 cut(s) 481
BsaI GGTCTC 1 cut(s) 259
BsaXI ACNNNNNCTCC 2 cut(s) 916, 946
Bsc4I CCNNNNNNNGG 1 cut(s) 15
Bse1I ACTGG 1 cut(s) 432
Bse3DI GCAATG 1 cut(s) 335
Bse8I GATNNNNATC 1 cut(s) 900
BseBI CCWGG 1 cut(s) 711
BseGI GGATG 4 cut(s) 142, 203, 220, 988
BseJI GATNNNNATC 1 cut(s) 900
BseLI CCNNNNNNNGG 1 cut(s) 15
BseMI GCAATG 1 cut(s) 335
BseMII CTCAG 1 cut(s) 24
BseNI ACTGG 1 cut(s) 432
BseRI GAGGAG 1 cut(s) 596
BseXI GCAGC 2 cut(s) 12, 985
BsgI GTGCAG 1 cut(s) 282
Bsh1236I CGCG 1 cut(s) 134
BshFI GGCC 1 cut(s) 848
BslFI GGGAC 1 cut(s) 836
BslI CCNNNNNNNGG 1 cut(s) 15
BsmAI GTCTC 1 cut(s) 259
BsmFI GGGAC 1 cut(s) 836
BsnI GGCC 1 cut(s) 848
Bso31I GGTCTC 1 cut(s) 259
Bsp119I TTCGAA 1 cut(s) 744
Bsp143I GATC 4 cut(s) 367, 402, 760, 901
BspACI CCGC 3 cut(s) 134, 365, 1001
BspANI GGCC 1 cut(s) 848
BspCNI CTCAG 1 cut(s) 23
BspFNI CGCG 1 cut(s) 134
BspLI GGNNCC 1 cut(s) 369
BspPI GGATC 3 cut(s) 362, 375, 909
BspT104I TTCGAA 1 cut(s) 744
BspTI CTTAAG 1 cut(s) 323
BspTNI GGTCTC 1 cut(s) 259
BsrDI GCAATG 1 cut(s) 335
BsrI ACTGG 1 cut(s) 432
BssMI GATC 4 cut(s) 367, 402, 760, 901
BssNI GRCGYC 1 cut(s) 481
BssSI CACGAG 1 cut(s) 309
Bst2BI CACGAG 1 cut(s) 309
Bst2UI CCWGG 1 cut(s) 711
Bst4CI ACNGT 1 cut(s) 1051
BstACI GRCGYC 1 cut(s) 481
BstAFI CTTAAG 1 cut(s) 323
BstBAI YACGTR 2 cut(s) 459, 938
BstBI TTCGAA 1 cut(s) 744
BstDEI CTNAG 2 cut(s) 10, 62
BstF5I GGATG 4 cut(s) 142, 203, 220, 988
BstFNI CGCG 1 cut(s) 134
BstKTI GATC 4 cut(s) 370, 405, 763, 904
BstMAI GTCTC 1 cut(s) 259
BstMBI GATC 4 cut(s) 367, 402, 760, 901
BstMWI GCNNNNNNNGC 2 cut(s) 31, 611
BstNI CCWGG 1 cut(s) 711
BstNSI RCATGY 1 cut(s) 998
BstSCI CCNGG 1 cut(s) 709
BstUI CGCG 1 cut(s) 134
BstV1I GCAGC 2 cut(s) 12, 985
BstV2I GAAGAC 2 cut(s) 114, 805
BstX2I RGATCY 1 cut(s) 367
BstYI RGATCY 1 cut(s) 367
BsuRI GGCC 1 cut(s) 848
BtgZI GCGATG 1 cut(s) 141
BtsCI GGATG 4 cut(s) 142, 203, 220, 988
BtsIMutI CAGTG 1 cut(s) 846
Cfr13I GGNCC 2 cut(s) 780, 932
Csp6I GTAC 1 cut(s) 700
CviAII CATG 6 cut(s) 114, 420, 487, 719, 893, 995
CviQI GTAC 1 cut(s) 700
DdeI CTNAG 2 cut(s) 10, 62
DpnI GATC 4 cut(s) 369, 404, 762, 903
DpnII GATC 4 cut(s) 367, 402, 760, 901
DraIII CACNNNGTG 1 cut(s) 459
EciI GGCGGA 1 cut(s) 380
Eco31I GGTCTC 1 cut(s) 259
Eco32I GATATC 1 cut(s) 866
Eco47I GGWCC 2 cut(s) 780, 932
Eco72I CACGTG 1 cut(s) 938
EcoRII CCWGG 1 cut(s) 709
EcoRV GATATC 1 cut(s) 866
FaeI CATG 6 cut(s) 117, 423, 490, 722, 896, 998
FalI AAGNNNNNCTT 2 cut(s) 486, 518
FaqI GGGAC 1 cut(s) 836
FatI CATG 6 cut(s) 113, 419, 486, 718, 892, 994
FbaI TGATCA 2 cut(s) 402, 760
Fnu4HI GCNGC 3 cut(s) 26, 999, 1002
FokI GGATG 4 cut(s) 149, 210, 227, 995
Fsp4HI GCNGC 3 cut(s) 26, 999, 1002
FspBI CTAG 2 cut(s) 192, 252
GluI GCNGC 3 cut(s) 26, 999, 1002
HaeIII GGCC 1 cut(s) 848
Hin1I GRCGYC 1 cut(s) 481
Hin1II CATG 6 cut(s) 117, 423, 490, 722, 896, 998
HincII GTYRAC 2 cut(s) 425, 716
HindII GTYRAC 2 cut(s) 425, 716
HinfI GANTC 6 cut(s) 5, 44, 232, 307, 473, 925
HphI GGTGA 3 cut(s) 113, 812, 979
Hpy166II GTNNAC 5 cut(s) 425, 462, 716, 780, 935
Hpy188I TCNGA 3 cut(s) 13, 440, 909
Hpy188III TCNNGA 6 cut(s) 149, 192, 252, 304, 477, 764
Hpy8I GTNNAC 5 cut(s) 425, 462, 716, 780, 935
Hpy99I CGWCG 2 cut(s) 483, 486
HpyAV CCTTC 1 cut(s) 302
HpyCH4III ACNGT 1 cut(s) 1051
HpyCH4IV ACGT 3 cut(s) 458, 481, 937
HpyCH4V TGCA 6 cut(s) 157, 299, 383, 393, 605, 879
HpyF10VI GCNNNNNNNGC 2 cut(s) 31, 611
HpyF3I CTNAG 2 cut(s) 10, 62
HpySE526I ACGT 3 cut(s) 458, 481, 937
Hsp92I GRCGYC 1 cut(s) 481
Hsp92II CATG 6 cut(s) 117, 423, 490, 722, 896, 998
Ksp22I TGATCA 2 cut(s) 402, 760
Kzo9I GATC 4 cut(s) 367, 402, 760, 901
LmnI GCTCC 2 cut(s) 82, 712
LpnPI CCDG 6 cut(s) 309, 350, 413, 638, 696, 723
Lsp1109I GCAGC 2 cut(s) 12, 985
MaeI CTAG 2 cut(s) 192, 252
MaeII ACGT 3 cut(s) 458, 481, 937
MaeIII GTNAC 3 cut(s) 229, 332, 985
MalI GATC 4 cut(s) 369, 404, 762, 903
MboI GATC 4 cut(s) 367, 402, 760, 901
MboII GAAGA 8 cut(s) 116, 119, 337, 506, 599, 620, 805, 1024
MflI RGATCY 1 cut(s) 367
MlyI GAGTC 3 cut(s) 226, 301, 934
MnlI CCTC 6 cut(s) 19, 188, 574, 577, 684, 859
MroXI GAANNNNTTC 2 cut(s) 344, 498
MseI TTAA 6 cut(s) 203, 258, 324, 444, 662, 687
MslI CAYNNNNRTG 1 cut(s) 398
MspCI CTTAAG 1 cut(s) 323
MspR9I CCNGG 1 cut(s) 711
MvaI CCWGG 1 cut(s) 711
MvnI CGCG 1 cut(s) 134
MwoI GCNNNNNNNGC 2 cut(s) 31, 611
NdeII GATC 4 cut(s) 367, 402, 760, 901
NlaIII CATG 6 cut(s) 117, 423, 490, 722, 896, 998
NlaIV GGNNCC 1 cut(s) 369
NmuCI GTSAC 3 cut(s) 229, 332, 985
NspI RCATGY 1 cut(s) 998
NspV TTCGAA 1 cut(s) 744
PcsI WCGNNNNNNNCGW 1 cut(s) 934
PdmI GAANNNNTTC 2 cut(s) 344, 498
PfeI GAWTC 2 cut(s) 44, 473
PkrI GCNGC 3 cut(s) 27, 1000, 1003
PleI GAGTC 3 cut(s) 226, 301, 933
PmaCI CACGTG 1 cut(s) 938
PmlI CACGTG 1 cut(s) 938
PpsI GAGTC 3 cut(s) 226, 301, 933
Ppu21I YACGTR 2 cut(s) 459, 938
PsiI TTATAA 1 cut(s) 537
Psp6I CCWGG 1 cut(s) 709
PspCI CACGTG 1 cut(s) 938
PspGI CCWGG 1 cut(s) 709
PspN4I GGNNCC 1 cut(s) 369
PspPI GGNCC 2 cut(s) 780, 932
PsrI GAACNNNNNNTAC 2 cut(s) 866, 898
PsuI RGATCY 1 cut(s) 367
RsaI GTAC 1 cut(s) 701
RsaNI GTAC 1 cut(s) 700
RseI CAYNNNNRTG 1 cut(s) 398
SaqAI TTAA 6 cut(s) 203, 258, 324, 444, 662, 687
SatI GCNGC 3 cut(s) 26, 999, 1002
Sau3AI GATC 4 cut(s) 367, 402, 760, 901
Sau96I GGNCC 2 cut(s) 780, 932
SchI GAGTC 3 cut(s) 226, 301, 934
ScrFI CCNGG 1 cut(s) 711
SfuI TTCGAA 1 cut(s) 744
SinI GGWCC 2 cut(s) 780, 932
SmiMI CAYNNNNRTG 1 cut(s) 398
SmlI CTYRAG 2 cut(s) 323, 850
SmoI CTYRAG 2 cut(s) 323, 850
SsiI CCGC 3 cut(s) 134, 365, 1001
SspMI CTAG 2 cut(s) 192, 252
StyD4I CCNGG 1 cut(s) 709
TaaI ACNGT 1 cut(s) 1051
TaiI ACGT 3 cut(s) 461, 484, 940
TaqI TCGA 2 cut(s) 744, 1024
TaqII GACCGA 1 cut(s) 283
TatI WGTACW 1 cut(s) 699
TauI GCSGC 1 cut(s) 1004
TfiI GAWTC 2 cut(s) 44, 473
Tru1I TTAA 6 cut(s) 203, 258, 324, 444, 662, 687
Tru9I TTAA 6 cut(s) 203, 258, 324, 444, 662, 687
TscAI CASTG 1 cut(s) 846
TseFI GTSAC 3 cut(s) 229, 332, 985
TseI GCWGC 2 cut(s) 25, 998
Tsp45I GTSAC 3 cut(s) 229, 332, 985
TspDTI ATGAA 4 cut(s) 214, 687, 805, 1025
TspGWI ACGGA 1 cut(s) 716
TspRI CASTG 1 cut(s) 846
Vha464I CTTAAG 1 cut(s) 323
VpaK11BI GGWCC 2 cut(s) 780, 932
XapI RAATTY 6 cut(s) 118, 220, 277, 518, 739, 971
XbaI TCTAGA 2 cut(s) 191, 251
XceI RCATGY 1 cut(s) 998
XmnI GAANNNNTTC 2 cut(s) 344, 498
XspI CTAG 2 cut(s) 192, 252
ZraI GACGTC 1 cut(s) 482
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.