FvH4_4g30240

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000064
Physical Location & Seq
Reverse (-)
29968650 .. 29969774
1125 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g30240.t1

Sequence Viewer

Length: 1125 bp
ATGACCAGAATAAAAAAATTGAACAAGCACGCTTCAGCTACCTTCAGTAGCTACTTATCAGCATGGCCTGATCTTCTCTTTTTGGTTTTGGACAAGTTGTTGGAACCCATCGACCATGTTCGTTGTGCTGCTGTCTGCAAGCAATGGCAGTCTCTTGCAAAAGAATATAATCTTGCGACGCAGCGATGGAGCAGGGTAGCTCCTATGCTCATGATTTCCGGCAGATCATCTACATCGATGTTCAGTGTTTCCGAAGGAAAAAGCTACATTAAAAATGTTCAGCTTCCGAACAAACATAAGAAAATTTGTGGCTCTAGCCATGGTTGGTTGGCCATAGTAGACAAAACTAGTCAGGACATAACTCTGGTGAACCCCTTTGCACAAGCAATGGCGCCCATTCATCTCCCTCATTTTGAGGAGAACGTCTCAAAGGTCATCCTTTCTGCCGGTCCTGCTTTGAACCCAACAAGTTATATGGTTGTAGCAATCTACAATTCGACGAAGTTGTCTGTTCTTAGAGGAGGAGAGGAAGATTGGAATTGCATCAGACTACCAGACAAACTATTTGACAGTCTTACTGATGTTATAATTTATAAAGGCCAGATCTACGCAGTATCAGTTTGTGGAAAGATCGTGTCAATCAATGTTAGCAAGTGTGTTATCAACTCTTCACATTCTCAAGAATCACTGGATGTTCGGGTGTTCATGACTTGCAGTAGGGAATTTAGGTATTGTGATGAGGCCTATCTCGTGGAATCAACCAAGGGGCACCTTTGGCACGTACAAAGTTGTTACATTGGAGTAACACAATTCGACGGCAGTGTACTTTTCGAAAAGAGTTTCAGGGTATACAAGGTGGAGTTCATCGATACAGATGGTTGCATGGTGAAGCATGTTGAGGTAAAAACCATAGAAGATGAGGCATTGTTCCTTGGCAAAAATTATTCATTATCTGTTTCGGCTTCAAAGCTTCCAGGGTACCGGCTAAATTCCATATACTACACTGGAGATTCGGAATCTGTTATGACAATTTATGATGTAGAGTTGGGAACTGCTTGCTATCCCAATTGTGGCCAAAAGCCACCCGGACTCTGGATTGCGCCACCGTTTAAGGGCCTCTGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295 F-box F-box-like

Protein Analysis

375

Amino Acids

41.87

Weight (kDa)

8.31

Isoelectric Point (pI)

37.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 24 - 55 6.5e-06 F-box-like
Beta-prop_KIB1-4 PF03478 80 - 346 1.4e-43 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000064)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04090 FvH4_1g04091 FvH4_1g04110 FvH4_1g04440 FvH4_1g05330 FvH4_1g05332 FvH4_1g05560 FvH4_1g05580 FvH4_1g05590 FvH4_1g05611 FvH4_1g05892 FvH4_1g05900 FvH4_1g06763 FvH4_1g17860 FvH4_1g17860 FvH4_1g17861 FvH4_1g17880 FvH4_1g17902 FvH4_2g08142 FvH4_2g25110 FvH4_2g34380 FvH4_3g19131 FvH4_3g20501 FvH4_4g02770 FvH4_4g02771 FvH4_4g17610 FvH4_4g26951 FvH4_4g28330 FvH4_4g29110 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29690 FvH4_4g29691 FvH4_4g30221 FvH4_4g30230 FvH4_4g30240 FvH4_4g30602 FvH4_4g30610 FvH4_6g01351 FvH4_6g01780 FvH4_6g01890 FvH4_6g47150 FvH4_6g52260 FvH4_6g52703 FvH4_7g23210 FvH4_7g23240 FvH4_7g23350 FvH4_7g28790 FvH4_7g28820 FvH4_7g28830 FvH4_7g28840 FvH4_7g28890 FvH4_7g29040 FvH4_7g29050 FvH4_7g29990 FvH4_7g33871 FvH4_c6g00090
malus_domestica MD01G1180800.v1.1 MD01G1199400.v1.1 MD02G1310000.v1.1 MD04G1097400.v1.1 MD07G1264800.v1.1 MD07G1264900.v1.1 MD07G1270200.v1.1 MD07G1270300.v1.1 MD07G1270500.v1.1 MD10G1043600.v1.1 MD13G1047500.v1.1 MD13G1075200.v1.1
prunus_persica Prupe.1G009400_v2.0.a1 Prupe.1G076100_v2.0.a1 Prupe.1G158300_v2.0.a1 Prupe.1G208900_v2.0.a1 Prupe.1G273900_v2.0.a1 Prupe.2G253900_v2.0.a1 Prupe.2G255700_v2.0.a1 Prupe.2G256000_v2.0.a1 Prupe.2G280300_v2.0.a1 Prupe.2G290700_v2.0.a1 Prupe.3G068500_v2.0.a1 Prupe.4G112800_v2.0.a1 Prupe.5G168600_v2.0.a1 Prupe.5G168800_v2.0.a1 Prupe.5G169100_v2.0.a1 Prupe.8G049800_v2.0.a1
pyrus_communis pycom01g19330 pycom01g20930 pycom01g22010 pycom01g22020 pycom02g26090 pycom07g24330 pycom07g24720 pycom13g04150 pycom420g01320
rosa_chinensis RchiOBHm_Chr1g0324121 RchiOBHm_Chr1g0324251 RchiOBHm_Chr1g0343741 RchiOBHm_Chr1g0355031 RchiOBHm_Chr1g0359461 RchiOBHm_Chr1g0376351 RchiOBHm_Chr1g0376381 RchiOBHm_Chr2g0092531 RchiOBHm_Chr2g0108311 RchiOBHm_Chr2g0108321 RchiOBHm_Chr2g0108331 RchiOBHm_Chr2g0133991 RchiOBHm_Chr2g0156691 RchiOBHm_Chr2g0173801 RchiOBHm_Chr3g0449701 RchiOBHm_Chr3g0449861 RchiOBHm_Chr4g0417201 RchiOBHm_Chr4g0417931 RchiOBHm_Chr4g0424551 RchiOBHm_Chr4g0442921 RchiOBHm_Chr4g0442931 RchiOBHm_Chr5g0032171 RchiOBHm_Chr5g0032191 RchiOBHm_Chr5g0032221 RchiOBHm_Chr6g0258051 RchiOBHm_Chr6g0277851 RchiOBHm_Chr6g0291671 RchiOBHm_Chr6g0291691 RchiOBHm_Chr6g0312761 RchiOBHm_Chr7g0223801 RchiOBHm_Chr7g0224141
rosa_laevigata RLG00000001917 RLG00000001951 RLG00000005804 RLG00000006309 RLG00000006344 RLG00000006458 RLG00000016168 RLG00000016259 RLG00000016305 RLG00000016306 RLG00000019810 RLG00000022223 RLG00000026077 RLG00000026607 RLG00000029703 RLG00000033364 RLG00000034633 RLG00000034637
rosa_multiflora Rmu_co8010764.1_g000001 Rmu_co8262143.1_g000001 Rmu_co8346175.1_g000001 Rmu_sc0000096.1_g000016 Rmu_sc0000544.1_g000003 Rmu_sc0000591.1_g000007 Rmu_sc0000756.1_g000029 Rmu_sc0000841.1_g000017 Rmu_sc0000907.1_g000020 Rmu_sc0000954.1_g000004 Rmu_sc0001195.1_g000007 Rmu_sc0001198.1_g000008 Rmu_sc0001201.1_g000011 Rmu_sc0001201.1_g000013 Rmu_sc0001782.1_g000035 Rmu_sc0001904.1_g000004 Rmu_sc0001962.1_g000039 Rmu_sc0002113.1_g000021 Rmu_sc0002226.1_g000017 Rmu_sc0002226.1_g000020 Rmu_sc0002327.1_g000005 Rmu_sc0002372.1_g000010 Rmu_sc0002372.1_g000014 Rmu_sc0002687.1_g000005 Rmu_sc0003031.1_g000019 Rmu_sc0003076.1_g000014 Rmu_sc0004296.1_g000009 Rmu_sc0004540.1_g000009 Rmu_sc0005369.1_g000002 Rmu_sc0005375.1_g000003 Rmu_sc0005375.1_g000013 Rmu_sc0005742.1_g000008 Rmu_sc0005742.1_g000015 Rmu_sc0005742.1_g000021 Rmu_sc0007419.1_g000011 Rmu_sc0008909.1_g000008 Rmu_sc0010556.1_g000018 Rmu_sc0010999.1_g000008 Rmu_sc0017510.1_g000003 Rmu_sc0017556.1_g000001 Rmu_sc0017900.1_g000007 Rmu_sc0024249.1_g000001 Rmu_sc0032377.1_g000001 Rmu_sc0033569.1_g000001 Rmu_sc0036457.1_g000001 Rmu_sc0041304.1_g000001 Rmu_ssc0000204.1_g000011 Rmu_ssc0000438.1_g000056
rosa_roxburghii Rroxscaffold_1G00048250 Rroxscaffold_1G00048290 Rroxscaffold_2G00092800 Rroxscaffold_2G00110580 Rroxscaffold_2G00135240 Rroxscaffold_2G00135260 Rroxscaffold_2G00135300 Rroxscaffold_2G00149010 Rroxscaffold_2G00149160 Rroxscaffold_2G00149170 Rroxscaffold_2G00149630 Rroxscaffold_2G00151760 Rroxscaffold_2G00151790 Rroxscaffold_2G00152170 Rroxscaffold_3G00225510 Rroxscaffold_3G00249210 Rroxscaffold_4G00277020 Rroxscaffold_4G00281760 Rroxscaffold_4G00281770 Rroxscaffold_4G00281810 Rroxscaffold_4G00281820 Rroxscaffold_4G00282160 Rroxscaffold_4G00310340 Rroxscaffold_5G00361040 Rroxscaffold_5G00363770 Rroxscaffold_5G00366460 Rroxscaffold_5G00378270 Rroxscaffold_5G00378310 Rroxscaffold_5G00379550 Rroxscaffold_5G00379650 Rroxscaffold_6G00422110 Rroxscaffold_6G00427680 Rroxscaffold_7G00175850 Rroxscaffold_7G00175860 Rroxscaffold_7G00190720 Rroxscaffold_7G00190750 Rroxscaffold_7G00190830 Rroxscaffold_7G00196820
rosa_rugosa Rorug01G0395900 Rorug01G0444400 Rorug01G0488100 Rorug02G0001700 Rorug02G0021600 Rorug02G0025700 Rorug02G0152200 Rorug02G0271300 Rorug02G0455800 Rorug02G0572800 Rorug02G0576000 Rorug04G0146300 Rorug04G0172200 Rorug04G0172400 Rorug04G0311300 Rorug04G0312200 Rorug04G0312300 Rorug05G0129500 Rorug05G0129700 Rorug05G0250600 Rorug06G0112600 Rorug06G0220700 Rorug06G0220800 Rorug07G0114600
rosa_samantha Rh1DG066700 Rh1DG081800 Rh1DG184300 Rh1DG401900 Rh1DG402700 Rh1DG407000 Rh1DG407600 Rh2AG200800 Rh2AG201000 Rh2AG521000 Rh2BG066200 Rh2BG066300 Rh2BG073900 Rh2BG373500 Rh2BG417600 Rh2BG662600 Rh2DG066200 Rh2DG072000 Rh2DG390000 Rh2DG677700 Rh3CG020200 Rh3CG021500 Rh3CG081200 Rh4AG209600 Rh4AG362600 Rh4AG362700 Rh4AG397200 Rh4BG209800 Rh4BG209900 Rh4BG210000 Rh4CG220800 Rh4CG271300 Rh4CG388000 Rh4DG029800 Rh4DG368700 Rh4DG403900 Rh5AG035900 Rh5BG034600 Rh5BG034900 Rh5DG228700 Rh5DG228800 Rh6AG355900 Rh6CG083600 Rh6CG229000 Rh6CG229100 Rh6CG229700 Rh6CG346500 Rh6CG346600 Rh7AG362300 Rh7AG362400 Rh7AG363200 Rh7AG365100 Rh7CG380900 Rh7CG381000 Rh7CG381600 Rh7DG437600
rosa_wichuraiana Rw0G004580 Rw0G004590 Rw0G005750 Rw0G006640 Rw0G007050 Rw0G008040 Rw0G012200 Rw0G013750 Rw0G016590 Rw1G006090 Rw1G012040 Rw1G036130 Rw1G036270 Rw1G036290 Rw1G036420 Rw1G036430 Rw1G036590 Rw2G003560 Rw2G005130 Rw2G005980 Rw2G006090 Rw2G015980 Rw2G016000 Rw2G043010 Rw2G053520 Rw4G018760 Rw4G022000 Rw4G034250 Rw5G003280 Rw5G020380 Rw5G020390 Rw6G008210 Rw6G031000 Rw7G030830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 587, 594
AasI GACNNNNNNGTC 1 cut(s) 505
Acc65I GGTACC 1 cut(s) 978
AccB1I GGYRCC 3 cut(s) 391, 768, 978
AccI GTMKAC 2 cut(s) 339, 849
AcoI YGGCCR 2 cut(s) 330, 1072
AcsI RAATTY 3 cut(s) 303, 722, 988
AcuI CTGAAG 2 cut(s) 18, 28
AcyI GRCGYC 1 cut(s) 392
AfaI GTAC 3 cut(s) 783, 825, 980
AfiI CCNNNNNNNGG 3 cut(s) 1070, 1092, 1112
AgsI TTSAA 3 cut(s) 22, 460, 966
AhlI ACTAGT 1 cut(s) 347
AjnI CCWGG 1 cut(s) 973
AluBI AGCT 6 cut(s) 38, 51, 200, 264, 283, 970
AluI AGCT 6 cut(s) 38, 51, 200, 264, 283, 970
Alw26I GTCTC 2 cut(s) 156, 430
AoxI GGCC 6 cut(s) 65, 330, 598, 741, 1072, 1114
ApeKI GCWGC 2 cut(s) 128, 181
ApoI RAATTY 3 cut(s) 303, 722, 988
ArsI GACNNNNNNTTYG 2 cut(s) 548, 580
Asp718I GGTACC 1 cut(s) 978
AspLEI GCGC 2 cut(s) 394, 1102
AspS9I GGNCC 2 cut(s) 449, 1114
AsuC2I CCSGG 1 cut(s) 1086
AsuHPI GGTGA 2 cut(s) 379, 898
AsuII TTCGAA 1 cut(s) 831
AvaII GGWCC 1 cut(s) 449
BaeGI GKGCMC 1 cut(s) 771
BalI TGGCCA 2 cut(s) 332, 1074
BanI GGYRCC 3 cut(s) 391, 768, 978
BauI CACGAG 1 cut(s) 749
BbvI GCAGC 2 cut(s) 115, 193
BccI CCATC 3 cut(s) 116, 180, 869
BceAI ACGGC 1 cut(s) 832
BciT130I CCWGG 1 cut(s) 975
BcnI CCSGG 1 cut(s) 1086
BcoDI GTCTC 2 cut(s) 156, 430
BcuI ACTAGT 1 cut(s) 347
BfaI CTAG 3 cut(s) 315, 348, 1123
BfoI RGCGCY 1 cut(s) 395
BglII AGATCT 1 cut(s) 603
BisI GCNGC 2 cut(s) 129, 182
BlsI GCNGC 2 cut(s) 130, 183
Bme1390I CCNGG 2 cut(s) 975, 1086
Bme18I GGWCC 1 cut(s) 449
BmgT120I GGNCC 2 cut(s) 449, 1114
BmiI GGNNCC 4 cut(s) 105, 393, 770, 980
BmrFI CCNGG 2 cut(s) 975, 1086
BmsI GCATC 1 cut(s) 552
BplI GAGNNNNNCTC 2 cut(s) 410, 442
BpmI CTGGAG 1 cut(s) 1026
Bpu14I TTCGAA 1 cut(s) 831
BpuEI CTTGAG 1 cut(s) 663
BpuMI CCSGG 1 cut(s) 1086
Bsa29I ATCGAT 2 cut(s) 236, 867
BsaAI YACGTR 1 cut(s) 781
BsaHI GRCGYC 1 cut(s) 392
BsaJI CCNNGG 4 cut(s) 319, 762, 931, 974
Bsc4I CCNNNNNNNGG 3 cut(s) 1070, 1092, 1112
Bse118I RCCGGY 2 cut(s) 446, 981
Bse1I ACTGG 2 cut(s) 693, 1009
Bse3DI GCAATG 2 cut(s) 149, 393
BseBI CCWGG 1 cut(s) 975
BseCI ATCGAT 2 cut(s) 236, 867
BseDI CCNNGG 4 cut(s) 319, 762, 931, 974
BseGI GGATG 2 cut(s) 435, 697
BseLI CCNNNNNNNGG 3 cut(s) 1070, 1092, 1112
BseMI GCAATG 2 cut(s) 149, 393
BseNI ACTGG 2 cut(s) 693, 1009
BseRI GAGGAG 3 cut(s) 431, 534, 537
BseSI GKGCMC 1 cut(s) 771
BseXI GCAGC 2 cut(s) 115, 193
BshFI GGCC 6 cut(s) 67, 332, 600, 743, 1074, 1116
BshNI GGYRCC 3 cut(s) 391, 768, 978
BshVI ATCGAT 2 cut(s) 236, 867
BsiSI CCGG 4 cut(s) 219, 447, 982, 1086
BslI CCNNNNNNNGG 3 cut(s) 1070, 1092, 1112
BsmAI GTCTC 2 cut(s) 156, 430
BsmBI CGTCTC 1 cut(s) 430
BsnI GGCC 6 cut(s) 67, 332, 600, 743, 1074, 1116
Bsp119I TTCGAA 1 cut(s) 831
Bsp1286I GDGCHC 1 cut(s) 771
Bsp143I GATC 4 cut(s) 70, 224, 603, 630
Bsp19I CCATGG 1 cut(s) 319
BspANI GGCC 6 cut(s) 67, 332, 600, 743, 1074, 1116
BspDI ATCGAT 2 cut(s) 236, 867
BspHI TCATGA 2 cut(s) 210, 705
BspLI GGNNCC 4 cut(s) 105, 393, 770, 980
BspT104I TTCGAA 1 cut(s) 831
BspT107I GGYRCC 3 cut(s) 391, 768, 978
BsrDI GCAATG 2 cut(s) 149, 393
BsrFI RCCGGY 2 cut(s) 446, 981
BsrI ACTGG 2 cut(s) 693, 1009
BssAI RCCGGY 2 cut(s) 446, 981
BssECI CCNNGG 4 cut(s) 319, 762, 931, 974
BssMI GATC 4 cut(s) 70, 224, 603, 630
BssNAI GTATAC 1 cut(s) 850
BssNI GRCGYC 1 cut(s) 392
BssSI CACGAG 1 cut(s) 749
BssT1I CCWWGG 3 cut(s) 319, 762, 931
Bst1107I GTATAC 1 cut(s) 850
Bst2BI CACGAG 1 cut(s) 749
Bst2UI CCWGG 1 cut(s) 975
Bst4CI ACNGT 2 cut(s) 572, 1107
Bst6I CTCTTC 1 cut(s) 673
BstACI GRCGYC 1 cut(s) 392
BstBAI YACGTR 1 cut(s) 781
BstBI TTCGAA 1 cut(s) 831
BstC8I GCNNGC 3 cut(s) 30, 140, 1057
BstDEI CTNAG 1 cut(s) 515
BstDSI CCRYGG 1 cut(s) 319
BstF5I GGATG 2 cut(s) 435, 697
BstH2I RGCGCY 1 cut(s) 395
BstHHI GCGC 2 cut(s) 394, 1102
BstKTI GATC 4 cut(s) 73, 227, 606, 633
BstMAI GTCTC 2 cut(s) 156, 430
BstMBI GATC 4 cut(s) 70, 224, 603, 630
BstMWI GCNNNNNNNGC 2 cut(s) 452, 775
BstNI CCWGG 1 cut(s) 975
BstNSI RCATGY 1 cut(s) 896
BstSCI CCNGG 2 cut(s) 973, 1084
BstSLI GKGCMC 1 cut(s) 771
BstV1I GCAGC 2 cut(s) 115, 193
BstX2I RGATCY 1 cut(s) 603
BstYI RGATCY 1 cut(s) 603
BstZ17I GTATAC 1 cut(s) 850
Bsu15I ATCGAT 2 cut(s) 236, 867
BsuRI GGCC 6 cut(s) 67, 332, 600, 743, 1074, 1116
BsuTUI ATCGAT 2 cut(s) 236, 867
BtgI CCRYGG 1 cut(s) 319
BtgZI GCGATG 1 cut(s) 199
BtsCI GGATG 2 cut(s) 435, 697
BtsI GCAGTG 1 cut(s) 826
BtsIMutI CAGTG 4 cut(s) 250, 686, 826, 1002
Cac8I GCNNGC 3 cut(s) 30, 140, 1057
CciI TCATGA 2 cut(s) 210, 705
CfoI GCGC 2 cut(s) 394, 1102
Cfr10I RCCGGY 2 cut(s) 446, 981
Cfr13I GGNCC 2 cut(s) 449, 1114
ClaI ATCGAT 2 cut(s) 236, 867
CseI GACGC 1 cut(s) 187
Csp6I GTAC 3 cut(s) 782, 824, 979
CviAII CATG 7 cut(s) 63, 116, 211, 320, 706, 883, 893
CviQI GTAC 3 cut(s) 782, 824, 979
DdeI CTNAG 1 cut(s) 515
DinI GGCGCC 1 cut(s) 393
DpnI GATC 4 cut(s) 72, 226, 605, 632
DpnII GATC 4 cut(s) 70, 224, 603, 630
DrdI GACNNNNNNGTC 1 cut(s) 505
DseDI GACNNNNNNGTC 1 cut(s) 505
EaeI YGGCCR 2 cut(s) 330, 1072
Eam1104I CTCTTC 1 cut(s) 673
EarI CTCTTC 1 cut(s) 673
Eco130I CCWWGG 3 cut(s) 319, 762, 931
Eco147I AGGCCT 1 cut(s) 743
Eco47I GGWCC 1 cut(s) 449
Eco57I CTGAAG 2 cut(s) 18, 28
EcoO109I RGGNCCY 1 cut(s) 1114
EcoRII CCWGG 1 cut(s) 973
EcoT14I CCWWGG 3 cut(s) 319, 762, 931
EgeI GGCGCC 1 cut(s) 393
EheI GGCGCC 1 cut(s) 393
ErhI CCWWGG 3 cut(s) 319, 762, 931
Esp3I CGTCTC 1 cut(s) 430
FaeI CATG 7 cut(s) 66, 119, 214, 323, 709, 886, 896
FatI CATG 7 cut(s) 62, 115, 210, 319, 705, 882, 892
FblI GTMKAC 2 cut(s) 339, 849
Fnu4HI GCNGC 2 cut(s) 129, 182
FokI GGATG 2 cut(s) 422, 704
Fsp4HI GCNGC 2 cut(s) 129, 182
FspBI CTAG 3 cut(s) 315, 348, 1123
GlaI GCGC 2 cut(s) 393, 1101
GluI GCNGC 2 cut(s) 129, 182
GsuI CTGGAG 1 cut(s) 1026
HaeII RGCGCY 1 cut(s) 395
HaeIII GGCC 6 cut(s) 67, 332, 600, 743, 1074, 1116
HapII CCGG 4 cut(s) 219, 447, 982, 1086
HgaI GACGC 1 cut(s) 187
HhaI GCGC 2 cut(s) 394, 1102
Hin1I GRCGYC 1 cut(s) 392
Hin1II CATG 7 cut(s) 66, 119, 214, 323, 709, 886, 896
Hin6I GCGC 2 cut(s) 392, 1100
HinP1I GCGC 2 cut(s) 392, 1100
HindIII AAGCTT 1 cut(s) 968
HinfI GANTC 5 cut(s) 683, 755, 1010, 1016, 1089
HpaII CCGG 4 cut(s) 219, 447, 982, 1086
HphI GGTGA 2 cut(s) 379, 898
Hpy166II GTNNAC 4 cut(s) 340, 370, 824, 850
Hpy188I TCNGA 4 cut(s) 253, 288, 548, 1015
Hpy188III TCNNGA 5 cut(s) 211, 353, 680, 706, 1093
Hpy8I GTNNAC 4 cut(s) 340, 370, 824, 850
Hpy99I CGWCG 3 cut(s) 181, 502, 818
HpyAV CCTTC 2 cut(s) 52, 248
HpyCH4III ACNGT 2 cut(s) 572, 1107
HpyCH4IV ACGT 2 cut(s) 423, 780
HpyCH4V TGCA 6 cut(s) 138, 158, 380, 543, 714, 882
HpyF10VI GCNNNNNNNGC 2 cut(s) 452, 775
HpyF3I CTNAG 1 cut(s) 515
HpySE526I ACGT 2 cut(s) 423, 780
Hsp92I GRCGYC 1 cut(s) 392
Hsp92II CATG 7 cut(s) 66, 119, 214, 323, 709, 886, 896
HspAI GCGC 2 cut(s) 392, 1100
KasI GGCGCC 1 cut(s) 391
KpnI GGTACC 1 cut(s) 982
Kzo9I GATC 4 cut(s) 70, 224, 603, 630
LmnI GCTCC 2 cut(s) 189, 205
Lsp1109I GCAGC 2 cut(s) 115, 193
LweI GCATC 1 cut(s) 552
MaeI CTAG 3 cut(s) 315, 348, 1123
MaeII ACGT 2 cut(s) 423, 780
MaeIII GTNAC 2 cut(s) 791, 802
MalI GATC 4 cut(s) 72, 226, 605, 632
MboI GATC 4 cut(s) 70, 224, 603, 630
MboII GAAGA 4 cut(s) 65, 542, 660, 926
MfeI CAATTG 1 cut(s) 1066
MflI RGATCY 1 cut(s) 603
MhlI GDGCHC 1 cut(s) 771
MlsI TGGCCA 2 cut(s) 332, 1074
MluNI TGGCCA 2 cut(s) 332, 1074
Mly113I GGCGCC 1 cut(s) 392
MlyI GAGTC 1 cut(s) 1083
MmeI TCCRAC 1 cut(s) 81
MnlI CCTC 8 cut(s) 409, 417, 512, 515, 520, 733, 892, 913
Mox20I TGGCCA 2 cut(s) 332, 1074
MscI TGGCCA 2 cut(s) 332, 1074
MseI TTAA 2 cut(s) 270, 1110
Msp20I TGGCCA 2 cut(s) 332, 1074
MspI CCGG 4 cut(s) 219, 447, 982, 1086
MspR9I CCNGG 2 cut(s) 975, 1086
MunI CAATTG 1 cut(s) 1066
MvaI CCWGG 1 cut(s) 975
MwoI GCNNNNNNNGC 2 cut(s) 452, 775
NarI GGCGCC 1 cut(s) 392
NciI CCSGG 1 cut(s) 1086
NcoI CCATGG 1 cut(s) 319
NdeII GATC 4 cut(s) 70, 224, 603, 630
NlaIII CATG 7 cut(s) 66, 119, 214, 323, 709, 886, 896
NlaIV GGNNCC 4 cut(s) 105, 393, 770, 980
NspI RCATGY 1 cut(s) 896
NspV TTCGAA 1 cut(s) 831
PagI TCATGA 2 cut(s) 210, 705
PceI AGGCCT 1 cut(s) 743
PfeI GAWTC 4 cut(s) 683, 755, 1010, 1016
PkrI GCNGC 2 cut(s) 130, 183
PleI GAGTC 1 cut(s) 1083
PluTI GGCGCC 1 cut(s) 395
PpsI GAGTC 1 cut(s) 1083
Ppu21I YACGTR 1 cut(s) 781
PsiI TTATAA 2 cut(s) 587, 594
Psp6I CCWGG 1 cut(s) 973
PspGI CCWGG 1 cut(s) 973
PspN4I GGNNCC 4 cut(s) 105, 393, 770, 980
PspPI GGNCC 2 cut(s) 449, 1114
PsuI RGATCY 1 cut(s) 603
RsaI GTAC 3 cut(s) 783, 825, 980
RsaNI GTAC 3 cut(s) 782, 824, 979
SaqAI TTAA 2 cut(s) 270, 1110
SatI GCNGC 2 cut(s) 129, 182
Sau3AI GATC 4 cut(s) 70, 224, 603, 630
Sau96I GGNCC 2 cut(s) 449, 1114
SchI GAGTC 1 cut(s) 1083
ScrFI CCNGG 2 cut(s) 975, 1086
SduI GDGCHC 1 cut(s) 771
SfaNI GCATC 1 cut(s) 552
SfoI GGCGCC 1 cut(s) 393
SfuI TTCGAA 1 cut(s) 831
SinI GGWCC 1 cut(s) 449
SmlI CTYRAG 1 cut(s) 678
SmoI CTYRAG 1 cut(s) 678
SpeI ACTAGT 1 cut(s) 347
SseBI AGGCCT 1 cut(s) 743
SspDI GGCGCC 1 cut(s) 391
SspMI CTAG 3 cut(s) 315, 348, 1123
StuI AGGCCT 1 cut(s) 743
StyD4I CCNGG 2 cut(s) 973, 1084
StyI CCWWGG 3 cut(s) 319, 762, 931
TaaI ACNGT 2 cut(s) 572, 1107
TaiI ACGT 2 cut(s) 426, 783
TaqI TCGA 6 cut(s) 111, 236, 497, 813, 831, 867
TatI WGTACW 1 cut(s) 823
TfiI GAWTC 4 cut(s) 683, 755, 1010, 1016
Tru1I TTAA 2 cut(s) 270, 1110
Tru9I TTAA 2 cut(s) 270, 1110
TscAI CASTG 4 cut(s) 250, 693, 826, 1009
TseI GCWGC 2 cut(s) 128, 181
TspDTI ATGAA 4 cut(s) 389, 694, 853, 936
TspRI CASTG 4 cut(s) 250, 693, 826, 1009
VpaK11BI GGWCC 1 cut(s) 449
XapI RAATTY 3 cut(s) 303, 722, 988
XceI RCATGY 1 cut(s) 896
XcmI CCANNNNNNNNNTGG 1 cut(s) 1089
XmiI GTMKAC 2 cut(s) 339, 849
XspI CTAG 3 cut(s) 315, 348, 1123
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.