Rh4AG397200

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4A
OG0000064
Physical Location & Seq
Forward (+)
70214072 .. 70215797
1726 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4AG397200.1

Sequence Viewer

Length: 1404 bp
ATGGATAGAAGTCAGAAACACAAGATTCACCAAAAGATGTCGGTCGCGGACGAGTCTCCCGTGAAACGTGATCTAGTATTGTATCACAATCCCTATACCGGCGTCGAAATTTACTCCATGCTTGAGGTCCACCCGGATAACAAGAATAAGCGACGTTTGGAGTTTGAGCTCCCTCCCCATAGGTCAATTAAGAAGCTCCACCGAATTGCCTGCAACGCTAGTTGCTCATCTGTATCAGAATGGGCAAGTCTTCCGAAGGACATTCTCCTTTTGATGTTGCACAAGTTGTTCGAACCCATTGACCATGTTCGCCTGGCTGCTGTTTGCAGCCATTGGCATAAAGTCTCCAAAGAGCATAATCATACAACTCAGCGCTGGTGCAACCTACTTCCAATGCTCATGATCCCCCCCTCCCGGCCCCCTAGCCCAATGAAGCAAATGGTTTATAGCCTTTCGGAAGGAGAAACCTATACAAACGTCCAATTACCGGTGCCTTATGATAGGAGGTGCTGTGGCTCCAGCCATGGTTGGTTGGCCACAGCACACGAGAATTTCGCCATAACTCTTTTGAATCCTTTCAGAAAAGCAGCGGCCATTCATTTGCCTCCCTTGACAACCCCACATAATCTCCGAGACTACCAATTTGGGTTACAGAAGTTCCAGGATCAGTTGAAGAAGCGCTACGACTATTATGTCTGTAAGGTTATATTATCTGCTGACCCGTCTTTGAATCCGCATAATTATGTGGTTGTGGCAACCTACGACTATTGTTGCAGGTTGGCTTTCATTAAAGCAGGACAAAGAGATTGGACTTATGTCGAGAAAACATATATGTTTTCTGATGCTATTTTTCACAGAAATGAAATTTATGCAGTTGGACTAGGGGGAATAATTGCGTCAGTTGATGTCAATAGTAGTAATGATCCTTCGCGGCCGCCAAAAGCAATTCCACTTACACGTTTACGACCAATGGAACACCCTCTGTTCCCATACAAAGCAGATAAGGCATATCTTGTTGAATCAACCAATGGAGACTTGCTGCATGTTCGAAGGTTTTTGAAACGAAAGGAAGGTCTTGATCAAAAGCTGGGGGTTATCAATTTTGTGGTATACAAGGTGTTATTCATCGACAACGATGGGACCTTTGTGAGGCAGGATCTGATAGACAGCATTGGGGATGATGCTTTGTTCTTGGGTGATAATCATTCAATATCTGTTTCGGCTTCAAATTTTCCTAGGTGCCAACCAAATTCCATCTACTTCACAAATGACATTATGAAGGGTGGTATGGGTATCTTCAATTTAGCAGACAAGACCGCCACACAACACTACCCTCTAAATCCCAGTGAGAGGTACATCCGACCCGCTATATGGATTGTGCCACCGTTCAATGGTCTTCGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295 F-box F-box-like

Protein Analysis

467

Amino Acids

53.63

Weight (kDa)

9.08

Isoelectric Point (pI)

46.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 81 - 117 9.2e-07 F-box-like
Beta-prop_KIB1-4 PF03478 148 - 434 4.5e-53 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000064)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04090 FvH4_1g04091 FvH4_1g04110 FvH4_1g04440 FvH4_1g05330 FvH4_1g05332 FvH4_1g05560 FvH4_1g05580 FvH4_1g05590 FvH4_1g05611 FvH4_1g05892 FvH4_1g05900 FvH4_1g06763 FvH4_1g17860 FvH4_1g17860 FvH4_1g17861 FvH4_1g17880 FvH4_1g17902 FvH4_2g08142 FvH4_2g25110 FvH4_2g34380 FvH4_3g19131 FvH4_3g20501 FvH4_4g02770 FvH4_4g02771 FvH4_4g17610 FvH4_4g26951 FvH4_4g28330 FvH4_4g29110 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29690 FvH4_4g29691 FvH4_4g30221 FvH4_4g30230 FvH4_4g30240 FvH4_4g30602 FvH4_4g30610 FvH4_6g01351 FvH4_6g01780 FvH4_6g01890 FvH4_6g47150 FvH4_6g52260 FvH4_6g52703 FvH4_7g23210 FvH4_7g23240 FvH4_7g23350 FvH4_7g28790 FvH4_7g28820 FvH4_7g28830 FvH4_7g28840 FvH4_7g28890 FvH4_7g29040 FvH4_7g29050 FvH4_7g29990 FvH4_7g33871 FvH4_c6g00090
malus_domestica MD01G1180800.v1.1 MD01G1199400.v1.1 MD02G1310000.v1.1 MD04G1097400.v1.1 MD07G1264800.v1.1 MD07G1264900.v1.1 MD07G1270200.v1.1 MD07G1270300.v1.1 MD07G1270500.v1.1 MD10G1043600.v1.1 MD13G1047500.v1.1 MD13G1075200.v1.1
prunus_persica Prupe.1G009400_v2.0.a1 Prupe.1G076100_v2.0.a1 Prupe.1G158300_v2.0.a1 Prupe.1G208900_v2.0.a1 Prupe.1G273900_v2.0.a1 Prupe.2G253900_v2.0.a1 Prupe.2G255700_v2.0.a1 Prupe.2G256000_v2.0.a1 Prupe.2G280300_v2.0.a1 Prupe.2G290700_v2.0.a1 Prupe.3G068500_v2.0.a1 Prupe.4G112800_v2.0.a1 Prupe.5G168600_v2.0.a1 Prupe.5G168800_v2.0.a1 Prupe.5G169100_v2.0.a1 Prupe.8G049800_v2.0.a1
pyrus_communis pycom01g19330 pycom01g20930 pycom01g22010 pycom01g22020 pycom02g26090 pycom07g24330 pycom07g24720 pycom13g04150 pycom420g01320
rosa_chinensis RchiOBHm_Chr1g0324121 RchiOBHm_Chr1g0324251 RchiOBHm_Chr1g0343741 RchiOBHm_Chr1g0355031 RchiOBHm_Chr1g0359461 RchiOBHm_Chr1g0376351 RchiOBHm_Chr1g0376381 RchiOBHm_Chr2g0092531 RchiOBHm_Chr2g0108311 RchiOBHm_Chr2g0108321 RchiOBHm_Chr2g0108331 RchiOBHm_Chr2g0133991 RchiOBHm_Chr2g0156691 RchiOBHm_Chr2g0173801 RchiOBHm_Chr3g0449701 RchiOBHm_Chr3g0449861 RchiOBHm_Chr4g0417201 RchiOBHm_Chr4g0417931 RchiOBHm_Chr4g0424551 RchiOBHm_Chr4g0442921 RchiOBHm_Chr4g0442931 RchiOBHm_Chr5g0032171 RchiOBHm_Chr5g0032191 RchiOBHm_Chr5g0032221 RchiOBHm_Chr6g0258051 RchiOBHm_Chr6g0277851 RchiOBHm_Chr6g0291671 RchiOBHm_Chr6g0291691 RchiOBHm_Chr6g0312761 RchiOBHm_Chr7g0223801 RchiOBHm_Chr7g0224141
rosa_laevigata RLG00000001917 RLG00000001951 RLG00000005804 RLG00000006309 RLG00000006344 RLG00000006458 RLG00000016168 RLG00000016259 RLG00000016305 RLG00000016306 RLG00000019810 RLG00000022223 RLG00000026077 RLG00000026607 RLG00000029703 RLG00000033364 RLG00000034633 RLG00000034637
rosa_multiflora Rmu_co8010764.1_g000001 Rmu_co8262143.1_g000001 Rmu_co8346175.1_g000001 Rmu_sc0000096.1_g000016 Rmu_sc0000544.1_g000003 Rmu_sc0000591.1_g000007 Rmu_sc0000756.1_g000029 Rmu_sc0000841.1_g000017 Rmu_sc0000907.1_g000020 Rmu_sc0000954.1_g000004 Rmu_sc0001195.1_g000007 Rmu_sc0001198.1_g000008 Rmu_sc0001201.1_g000011 Rmu_sc0001201.1_g000013 Rmu_sc0001782.1_g000035 Rmu_sc0001904.1_g000004 Rmu_sc0001962.1_g000039 Rmu_sc0002113.1_g000021 Rmu_sc0002226.1_g000017 Rmu_sc0002226.1_g000020 Rmu_sc0002327.1_g000005 Rmu_sc0002372.1_g000010 Rmu_sc0002372.1_g000014 Rmu_sc0002687.1_g000005 Rmu_sc0003031.1_g000019 Rmu_sc0003076.1_g000014 Rmu_sc0004296.1_g000009 Rmu_sc0004540.1_g000009 Rmu_sc0005369.1_g000002 Rmu_sc0005375.1_g000003 Rmu_sc0005375.1_g000013 Rmu_sc0005742.1_g000008 Rmu_sc0005742.1_g000015 Rmu_sc0005742.1_g000021 Rmu_sc0007419.1_g000011 Rmu_sc0008909.1_g000008 Rmu_sc0010556.1_g000018 Rmu_sc0010999.1_g000008 Rmu_sc0017510.1_g000003 Rmu_sc0017556.1_g000001 Rmu_sc0017900.1_g000007 Rmu_sc0024249.1_g000001 Rmu_sc0032377.1_g000001 Rmu_sc0033569.1_g000001 Rmu_sc0036457.1_g000001 Rmu_sc0041304.1_g000001 Rmu_ssc0000204.1_g000011 Rmu_ssc0000438.1_g000056
rosa_roxburghii Rroxscaffold_1G00048250 Rroxscaffold_1G00048290 Rroxscaffold_2G00092800 Rroxscaffold_2G00110580 Rroxscaffold_2G00135240 Rroxscaffold_2G00135260 Rroxscaffold_2G00135300 Rroxscaffold_2G00149010 Rroxscaffold_2G00149160 Rroxscaffold_2G00149170 Rroxscaffold_2G00149630 Rroxscaffold_2G00151760 Rroxscaffold_2G00151790 Rroxscaffold_2G00152170 Rroxscaffold_3G00225510 Rroxscaffold_3G00249210 Rroxscaffold_4G00277020 Rroxscaffold_4G00281760 Rroxscaffold_4G00281770 Rroxscaffold_4G00281810 Rroxscaffold_4G00281820 Rroxscaffold_4G00282160 Rroxscaffold_4G00310340 Rroxscaffold_5G00361040 Rroxscaffold_5G00363770 Rroxscaffold_5G00366460 Rroxscaffold_5G00378270 Rroxscaffold_5G00378310 Rroxscaffold_5G00379550 Rroxscaffold_5G00379650 Rroxscaffold_6G00422110 Rroxscaffold_6G00427680 Rroxscaffold_7G00175850 Rroxscaffold_7G00175860 Rroxscaffold_7G00190720 Rroxscaffold_7G00190750 Rroxscaffold_7G00190830 Rroxscaffold_7G00196820
rosa_rugosa Rorug01G0395900 Rorug01G0444400 Rorug01G0488100 Rorug02G0001700 Rorug02G0021600 Rorug02G0025700 Rorug02G0152200 Rorug02G0271300 Rorug02G0455800 Rorug02G0572800 Rorug02G0576000 Rorug04G0146300 Rorug04G0172200 Rorug04G0172400 Rorug04G0311300 Rorug04G0312200 Rorug04G0312300 Rorug05G0129500 Rorug05G0129700 Rorug05G0250600 Rorug06G0112600 Rorug06G0220700 Rorug06G0220800 Rorug07G0114600
rosa_samantha Rh1DG066700 Rh1DG081800 Rh1DG184300 Rh1DG401900 Rh1DG402700 Rh1DG407000 Rh1DG407600 Rh2AG200800 Rh2AG201000 Rh2AG521000 Rh2BG066200 Rh2BG066300 Rh2BG073900 Rh2BG373500 Rh2BG417600 Rh2BG662600 Rh2DG066200 Rh2DG072000 Rh2DG390000 Rh2DG677700 Rh3CG020200 Rh3CG021500 Rh3CG081200 Rh4AG209600 Rh4AG362600 Rh4AG362700 Rh4AG397200 Rh4BG209800 Rh4BG209900 Rh4BG210000 Rh4CG220800 Rh4CG271300 Rh4CG388000 Rh4DG029800 Rh4DG368700 Rh4DG403900 Rh5AG035900 Rh5BG034600 Rh5BG034900 Rh5DG228700 Rh5DG228800 Rh6AG355900 Rh6CG083600 Rh6CG229000 Rh6CG229100 Rh6CG229700 Rh6CG346500 Rh6CG346600 Rh7AG362300 Rh7AG362400 Rh7AG363200 Rh7AG365100 Rh7CG380900 Rh7CG381000 Rh7CG381600 Rh7DG437600
rosa_wichuraiana Rw0G004580 Rw0G004590 Rw0G005750 Rw0G006640 Rw0G007050 Rw0G008040 Rw0G012200 Rw0G013750 Rw0G016590 Rw1G006090 Rw1G012040 Rw1G036130 Rw1G036270 Rw1G036290 Rw1G036420 Rw1G036430 Rw1G036590 Rw2G003560 Rw2G005130 Rw2G005980 Rw2G006090 Rw2G015980 Rw2G016000 Rw2G043010 Rw2G053520 Rw4G018760 Rw4G022000 Rw4G034250 Rw5G003280 Rw5G020380 Rw5G020390 Rw6G008210 Rw6G031000 Rw7G030830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 692
Acc36I ACCTGC 1 cut(s) 765
AccB1I GGYRCC 2 cut(s) 490, 1239
AccI GTMKAC 1 cut(s) 1110
AccII CGCG 2 cut(s) 47, 931
AciI CCGC 7 cut(s) 47, 590, 734, 931, 935, 1317, 1365
AclWI GGATC 4 cut(s) 397, 672, 917, 1164
AcoI YGGCCR 3 cut(s) 534, 591, 932
AcsI RAATTY 5 cut(s) 108, 550, 864, 1228, 1249
AcyI GRCGYC 1 cut(s) 102
AfaI GTAC 1 cut(s) 1355
AfeI AGCGCT 2 cut(s) 374, 680
AfiI CCNNNNNNNGG 7 cut(s) 98, 414, 487, 1149, 1350, 1371, 1391
AflIII ACRYGT 1 cut(s) 956
AgeI ACCGGT 1 cut(s) 487
AgsI TTSAA 9 cut(s) 571, 673, 730, 1019, 1060, 1209, 1227, 1300, 1390
AjnI CCWGG 2 cut(s) 312, 660
AluBI AGCT 3 cut(s) 169, 196, 1087
AluI AGCT 3 cut(s) 169, 196, 1087
Alw21I GWGCWC 1 cut(s) 171
Alw26I GTCTC 4 cut(s) 60, 349, 627, 1026
AlwI GGATC 4 cut(s) 397, 672, 917, 1164
AlwNI CAGNNNCTG 1 cut(s) 1159
Aor51HI AGCGCT 2 cut(s) 374, 680
AoxI GGCC 4 cut(s) 416, 534, 591, 932
ApeKI GCWGC 4 cut(s) 317, 327, 587, 1039
ApoI RAATTY 5 cut(s) 108, 550, 864, 1228, 1249
ArsI GACNNNNNNTTYG 4 cut(s) 626, 658, 1057, 1089
AsiGI ACCGGT 1 cut(s) 487
Asp700I GAANNNNTTC 1 cut(s) 575
AspA2I CCTAGG 1 cut(s) 1235
AspLEI GCGC 2 cut(s) 375, 681
AspS9I GGNCC 3 cut(s) 127, 417, 1140
AsuC2I CCSGG 2 cut(s) 134, 415
AsuHPI GGTGA 2 cut(s) 20, 1208
AsuII TTCGAA 2 cut(s) 291, 1048
AvaII GGWCC 2 cut(s) 127, 1140
AvrII CCTAGG 1 cut(s) 1235
BalI TGGCCA 1 cut(s) 536
BanI GGYRCC 2 cut(s) 490, 1239
BanII GRGCYC 1 cut(s) 171
BarI GAAGNNNNNNTAC 4 cut(s) 665, 697, 910, 942
BauI CACGAG 1 cut(s) 545
BbsI GAAGAC 2 cut(s) 242, 1388
Bbv12I GWGCWC 1 cut(s) 171
BbvI GCAGC 4 cut(s) 304, 339, 599, 1026
BccI CCATC 2 cut(s) 1130, 1262
BcgI CGANNNNNNTGC 2 cut(s) 192, 226
BciT130I CCWGG 2 cut(s) 314, 662
BclI TGATCA 1 cut(s) 1078
BcnI CCSGG 2 cut(s) 134, 415
BcoDI GTCTC 4 cut(s) 60, 349, 627, 1026
BfaI CTAG 6 cut(s) 74, 219, 423, 881, 1236, 1402
BfoI RGCGCY 2 cut(s) 376, 682
BfuAI ACCTGC 1 cut(s) 765
BisI GCNGC 7 cut(s) 318, 328, 588, 591, 932, 935, 1040
BlnI CCTAGG 1 cut(s) 1235
BlsI GCNGC 7 cut(s) 319, 329, 589, 592, 933, 936, 1041
Bme1390I CCNGG 4 cut(s) 134, 314, 415, 662
Bme18I GGWCC 2 cut(s) 127, 1140
BmgT120I GGNCC 3 cut(s) 127, 417, 1140
BmiI GGNNCC 5 cut(s) 419, 492, 517, 1141, 1241
BmrFI CCNGG 4 cut(s) 134, 314, 415, 662
BmrI ACTGGG 1 cut(s) 1338
BmsI GCATC 2 cut(s) 832, 1171
BmuI ACTGGG 1 cut(s) 1338
BoxI GACNNNNGTC 1 cut(s) 815
BpiI GAAGAC 2 cut(s) 242, 1388
BpmI CTGGAG 1 cut(s) 502
Bpu14I TTCGAA 2 cut(s) 291, 1048
BpuEI CTTGAG 1 cut(s) 143
BpuMI CCSGG 2 cut(s) 134, 415
BsaHI GRCGYC 1 cut(s) 102
BsaJI CCNNGG 2 cut(s) 523, 1235
BsaWI WCCGGW 1 cut(s) 487
BsaXI ACNNNNNCTCC 4 cut(s) 496, 526, 612, 642
Bsc4I CCNNNNNNNGG 7 cut(s) 98, 414, 487, 1149, 1350, 1371, 1391
Bse118I RCCGGY 2 cut(s) 98, 487
Bse1I ACTGG 1 cut(s) 1344
BseBI CCWGG 2 cut(s) 314, 662
BseDI CCNNGG 2 cut(s) 523, 1235
BseGI GGATG 2 cut(s) 1183, 1356
BseLI CCNNNNNNNGG 7 cut(s) 98, 414, 487, 1149, 1350, 1371, 1391
BseMII CTCAG 1 cut(s) 383
BseNI ACTGG 1 cut(s) 1344
BseX3I CGGCCG 1 cut(s) 932
BseXI GCAGC 4 cut(s) 304, 339, 599, 1026
BseYI CCCAGC 1 cut(s) 1087
Bsh1236I CGCG 2 cut(s) 47, 931
Bsh1285I CGRYCG 2 cut(s) 45, 935
BshFI GGCC 4 cut(s) 418, 536, 593, 934
BshNI GGYRCC 2 cut(s) 490, 1239
BshTI ACCGGT 1 cut(s) 487
BsiEI CGRYCG 2 cut(s) 45, 935
BsiHKAI GWGCWC 1 cut(s) 171
BsiSI CCGG 4 cut(s) 99, 134, 415, 488
BslFI GGGAC 1 cut(s) 1153
BslI CCNNNNNNNGG 7 cut(s) 98, 414, 487, 1149, 1350, 1371, 1391
BsmAI GTCTC 4 cut(s) 60, 349, 627, 1026
BsmFI GGGAC 1 cut(s) 1153
BsnI GGCC 4 cut(s) 418, 536, 593, 934
Bsp119I TTCGAA 2 cut(s) 291, 1048
Bsp1286I GDGCHC 1 cut(s) 171
Bsp143I GATC 6 cut(s) 70, 402, 664, 922, 1078, 1156
Bsp19I CCATGG 1 cut(s) 523
BspACI CCGC 7 cut(s) 47, 590, 734, 931, 935, 1317, 1365
BspANI GGCC 4 cut(s) 418, 536, 593, 934
BspCNI CTCAG 1 cut(s) 382
BspFNI CGCG 2 cut(s) 47, 931
BspHI TCATGA 1 cut(s) 399
BspLI GGNNCC 5 cut(s) 419, 492, 517, 1141, 1241
BspMI ACCTGC 1 cut(s) 765
BspPI GGATC 4 cut(s) 397, 672, 917, 1164
BspT104I TTCGAA 2 cut(s) 291, 1048
BspT107I GGYRCC 2 cut(s) 490, 1239
BsrFI RCCGGY 2 cut(s) 98, 487
BsrI ACTGG 1 cut(s) 1344
BssAI RCCGGY 2 cut(s) 98, 487
BssECI CCNNGG 2 cut(s) 523, 1235
BssMI GATC 6 cut(s) 70, 402, 664, 922, 1078, 1156
BssNAI GTATAC 1 cut(s) 1111
BssNI GRCGYC 1 cut(s) 102
BssSI CACGAG 1 cut(s) 545
BssT1I CCWWGG 2 cut(s) 523, 1235
Bst1107I GTATAC 1 cut(s) 1111
Bst2BI CACGAG 1 cut(s) 545
Bst2UI CCWGG 2 cut(s) 314, 662
Bst4CI ACNGT 1 cut(s) 1386
BstACI GRCGYC 1 cut(s) 102
BstBI TTCGAA 2 cut(s) 291, 1048
BstC8I GCNNGC 1 cut(s) 211
BstDEI CTNAG 1 cut(s) 369
BstDSI CCRYGG 1 cut(s) 523
BstENI CCTNNNNNAGG 1 cut(s) 1147
BstF5I GGATG 2 cut(s) 1183, 1356
BstFNI CGCG 2 cut(s) 47, 931
BstH2I RGCGCY 2 cut(s) 376, 682
BstHHI GCGC 2 cut(s) 375, 681
BstKTI GATC 6 cut(s) 73, 405, 667, 925, 1081, 1159
BstMAI GTCTC 4 cut(s) 60, 349, 627, 1026
BstMBI GATC 6 cut(s) 70, 402, 664, 922, 1078, 1156
BstMCI CGRYCG 2 cut(s) 45, 935
BstMWI GCNNNNNNNGC 2 cut(s) 215, 1004
BstNI CCWGG 2 cut(s) 314, 662
BstNSI RCATGY 1 cut(s) 1046
BstPAI GACNNNNGTC 1 cut(s) 815
BstSCI CCNGG 4 cut(s) 132, 312, 413, 660
BstUI CGCG 2 cut(s) 47, 931
BstV1I GCAGC 4 cut(s) 304, 339, 599, 1026
BstV2I GAAGAC 2 cut(s) 242, 1388
BstX2I RGATCY 1 cut(s) 1156
BstYI RGATCY 1 cut(s) 1156
BstZ17I GTATAC 1 cut(s) 1111
BstZI CGGCCG 1 cut(s) 932
BsuRI GGCC 4 cut(s) 418, 536, 593, 934
BtgI CCRYGG 1 cut(s) 523
BtsCI GGATG 2 cut(s) 1183, 1356
BtsIMutI CAGTG 1 cut(s) 1351
BveI ACCTGC 1 cut(s) 765
Cac8I GCNNGC 1 cut(s) 211
CaiI CAGNNNCTG 1 cut(s) 1159
CciI TCATGA 1 cut(s) 399
CciNI GCGGCCGC 1 cut(s) 932
CfoI GCGC 2 cut(s) 375, 681
Cfr10I RCCGGY 2 cut(s) 98, 487
Cfr13I GGNCC 3 cut(s) 127, 417, 1140
CseI GACGC 2 cut(s) 91, 885
Csp6I GTAC 1 cut(s) 1354
CspAI ACCGGT 1 cut(s) 487
CviAII CATG 5 cut(s) 118, 305, 400, 524, 1043
CviQI GTAC 1 cut(s) 1354
DdeI CTNAG 1 cut(s) 369
DpnI GATC 6 cut(s) 72, 404, 666, 924, 1080, 1158
DpnII GATC 6 cut(s) 70, 402, 664, 922, 1078, 1156
DrdI GACNNNNNNGTC 1 cut(s) 692
DseDI GACNNNNNNGTC 1 cut(s) 692
EaeI YGGCCR 3 cut(s) 534, 591, 932
EagI CGGCCG 1 cut(s) 932
Ecl136II GAGCTC 1 cut(s) 169
EclXI CGGCCG 1 cut(s) 932
Eco130I CCWWGG 2 cut(s) 523, 1235
Eco24I GRGCYC 1 cut(s) 171
Eco47I GGWCC 2 cut(s) 127, 1140
Eco47III AGCGCT 2 cut(s) 374, 680
Eco52I CGGCCG 1 cut(s) 932
Eco53kI GAGCTC 1 cut(s) 169
EcoICRI GAGCTC 1 cut(s) 169
EcoNI CCTNNNNNAGG 1 cut(s) 1147
EcoO109I RGGNCCY 1 cut(s) 1140
EcoRII CCWGG 2 cut(s) 312, 660
EcoT14I CCWWGG 2 cut(s) 523, 1235
EcoT38I GRGCYC 1 cut(s) 171
ErhI CCWWGG 2 cut(s) 523, 1235
FaeI CATG 5 cut(s) 121, 308, 403, 527, 1046
FaqI GGGAC 1 cut(s) 1153
FatI CATG 5 cut(s) 117, 304, 399, 523, 1042
FauI CCCGC 1 cut(s) 1372
FbaI TGATCA 1 cut(s) 1078
FblI GTMKAC 1 cut(s) 1110
Fnu4HI GCNGC 7 cut(s) 318, 328, 588, 591, 932, 935, 1040
FokI GGATG 2 cut(s) 1190, 1343
FriOI GRGCYC 1 cut(s) 171
Fsp4HI GCNGC 7 cut(s) 318, 328, 588, 591, 932, 935, 1040
FspBI CTAG 6 cut(s) 74, 219, 423, 881, 1236, 1402
GlaI GCGC 2 cut(s) 374, 680
GluI GCNGC 7 cut(s) 318, 328, 588, 591, 932, 935, 1040
GsaI CCCAGC 1 cut(s) 1091
GsuI CTGGAG 1 cut(s) 502
HaeII RGCGCY 2 cut(s) 376, 682
HaeIII GGCC 4 cut(s) 418, 536, 593, 934
HapII CCGG 4 cut(s) 99, 134, 415, 488
HgaI GACGC 2 cut(s) 91, 885
HhaI GCGC 2 cut(s) 375, 681
Hin1I GRCGYC 1 cut(s) 102
Hin1II CATG 5 cut(s) 121, 308, 403, 527, 1046
Hin6I GCGC 2 cut(s) 373, 679
HinP1I GCGC 2 cut(s) 373, 679
HinfI GANTC 5 cut(s) 25, 53, 571, 730, 1019
HpaII CCGG 4 cut(s) 99, 134, 415, 488
HphI GGTGA 2 cut(s) 20, 1208
Hpy166II GTNNAC 3 cut(s) 130, 962, 1111
Hpy188I TCNGA 9 cut(s) 15, 238, 255, 457, 581, 632, 841, 1161, 1361
Hpy188III TCNNGA 3 cut(s) 400, 820, 1076
Hpy8I GTNNAC 3 cut(s) 130, 962, 1111
Hpy99I CGWCG 2 cut(s) 107, 156
HpyAV CCTTC 6 cut(s) 250, 452, 936, 1044, 1064, 1273
HpyCH4III ACNGT 1 cut(s) 1386
HpyCH4IV ACGT 4 cut(s) 67, 154, 477, 958
HpyCH4V TGCA 7 cut(s) 213, 280, 327, 381, 774, 872, 1042
HpyF10VI GCNNNNNNNGC 2 cut(s) 215, 1004
HpyF3I CTNAG 1 cut(s) 369
HpySE526I ACGT 4 cut(s) 67, 154, 477, 958
Hsp92I GRCGYC 1 cut(s) 102
Hsp92II CATG 5 cut(s) 121, 308, 403, 527, 1046
HspAI GCGC 2 cut(s) 373, 679
Ksp22I TGATCA 1 cut(s) 1078
Kzo9I GATC 6 cut(s) 70, 402, 664, 922, 1078, 1156
LmnI GCTCC 3 cut(s) 174, 201, 521
Lsp1109I GCAGC 4 cut(s) 304, 339, 599, 1026
LweI GCATC 2 cut(s) 832, 1171
MaeI CTAG 6 cut(s) 74, 219, 423, 881, 1236, 1402
MaeII ACGT 4 cut(s) 67, 154, 477, 958
MaeIII GTNAC 1 cut(s) 648
MalI GATC 6 cut(s) 72, 404, 666, 924, 1080, 1158
MboI GATC 6 cut(s) 70, 402, 664, 922, 1078, 1156
MboII GAAGA 4 cut(s) 242, 685, 1288, 1388
MflI RGATCY 1 cut(s) 1156
MhlI GDGCHC 1 cut(s) 171
MlsI TGGCCA 1 cut(s) 536
MluNI TGGCCA 1 cut(s) 536
MlyI GAGTC 1 cut(s) 62
MmeI TCCRAC 2 cut(s) 856, 1384
MnlI CCTC 9 cut(s) 118, 183, 421, 498, 615, 990, 1143, 1344, 1344
Mox20I TGGCCA 1 cut(s) 536
MroXI GAANNNNTTC 1 cut(s) 575
MscI TGGCCA 1 cut(s) 536
MseI TTAA 2 cut(s) 189, 789
MslI CAYNNNNRTG 2 cut(s) 741, 858
Msp20I TGGCCA 1 cut(s) 536
MspA1I CMGCKG 1 cut(s) 590
MspI CCGG 4 cut(s) 99, 134, 415, 488
MspR9I CCNGG 4 cut(s) 134, 314, 415, 662
MvaI CCWGG 2 cut(s) 314, 662
MvnI CGCG 2 cut(s) 47, 931
MwoI GCNNNNNNNGC 2 cut(s) 215, 1004
NciI CCSGG 2 cut(s) 134, 415
NcoI CCATGG 1 cut(s) 523
NdeII GATC 6 cut(s) 70, 402, 664, 922, 1078, 1156
NlaIII CATG 5 cut(s) 121, 308, 403, 527, 1046
NlaIV GGNNCC 5 cut(s) 419, 492, 517, 1141, 1241
NotI GCGGCCGC 1 cut(s) 932
NspI RCATGY 1 cut(s) 1046
NspV TTCGAA 2 cut(s) 291, 1048
PagI TCATGA 1 cut(s) 399
PcsI WCGNNNNNNNCGW 1 cut(s) 57
PdmI GAANNNNTTC 1 cut(s) 575
PfeI GAWTC 4 cut(s) 25, 571, 730, 1019
PfoI TCCNGGA 1 cut(s) 660
PinAI ACCGGT 1 cut(s) 487
PkrI GCNGC 7 cut(s) 319, 329, 589, 592, 933, 936, 1041
PleI GAGTC 1 cut(s) 61
PpsI GAGTC 1 cut(s) 61
PpuMI RGGWCCY 1 cut(s) 1140
PshAI GACNNNNGTC 1 cut(s) 815
Psp124BI GAGCTC 1 cut(s) 171
Psp5II RGGWCCY 1 cut(s) 1140
Psp6I CCWGG 2 cut(s) 312, 660
PspFI CCCAGC 1 cut(s) 1087
PspGI CCWGG 2 cut(s) 312, 660
PspN4I GGNNCC 5 cut(s) 419, 492, 517, 1141, 1241
PspPI GGNCC 3 cut(s) 127, 417, 1140
PspPPI RGGWCCY 1 cut(s) 1140
PstNI CAGNNNCTG 1 cut(s) 1159
PsuI RGATCY 1 cut(s) 1156
RsaI GTAC 1 cut(s) 1355
RsaNI GTAC 1 cut(s) 1354
RseI CAYNNNNRTG 2 cut(s) 741, 858
SacI GAGCTC 1 cut(s) 171
SaqAI TTAA 2 cut(s) 189, 789
SatI GCNGC 7 cut(s) 318, 328, 588, 591, 932, 935, 1040
Sau3AI GATC 6 cut(s) 70, 402, 664, 922, 1078, 1156
Sau96I GGNCC 3 cut(s) 127, 417, 1140
SchI GAGTC 1 cut(s) 62
ScrFI CCNGG 4 cut(s) 134, 314, 415, 662
SduI GDGCHC 1 cut(s) 171
SfaNI GCATC 2 cut(s) 832, 1171
SfuI TTCGAA 2 cut(s) 291, 1048
SinI GGWCC 2 cut(s) 127, 1140
SmiMI CAYNNNNRTG 2 cut(s) 741, 858
SmlI CTYRAG 1 cut(s) 122
SmoI CTYRAG 1 cut(s) 122
SsiI CCGC 7 cut(s) 47, 590, 734, 931, 935, 1317, 1365
SspMI CTAG 6 cut(s) 74, 219, 423, 881, 1236, 1402
SstI GAGCTC 1 cut(s) 171
StyD4I CCNGG 4 cut(s) 132, 312, 413, 660
StyI CCWWGG 2 cut(s) 523, 1235
TaaI ACNGT 1 cut(s) 1386
TaiI ACGT 4 cut(s) 70, 157, 480, 961
TaqI TCGA 5 cut(s) 105, 291, 819, 1048, 1128
TaqII GACCGA 1 cut(s) 31
TauI GCSGC 3 cut(s) 593, 934, 937
TfiI GAWTC 4 cut(s) 25, 571, 730, 1019
Tru1I TTAA 2 cut(s) 189, 789
Tru9I TTAA 2 cut(s) 189, 789
TscAI CASTG 1 cut(s) 1351
TseI GCWGC 4 cut(s) 317, 327, 587, 1039
TspDTI ATGAA 6 cut(s) 446, 587, 775, 876, 1114, 1292
TspRI CASTG 1 cut(s) 1351
VpaK11BI GGWCC 2 cut(s) 127, 1140
XagI CCTNNNNNAGG 1 cut(s) 1147
XapI RAATTY 5 cut(s) 108, 550, 864, 1228, 1249
XceI RCATGY 1 cut(s) 1046
XmaJI CCTAGG 1 cut(s) 1235
XmiI GTMKAC 1 cut(s) 1110
XmnI GAANNNNTTC 1 cut(s) 575
XspI CTAG 6 cut(s) 74, 219, 423, 881, 1236, 1402
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.