Prupe.1G076100_v2.0.a1

Protein of unknown function (DUF295)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0000064
Physical Location & Seq
Reverse (-)
5481339 .. 5482508
1170 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G076100.1

Sequence Viewer

Length: 1050 bp
ATGTCTTGTGTTCCATGCATACACATTCTCACAAGATCAAGGAATAATAAGAATACTAGTAGCAGTCAAGTGTCAGATCAATGGGCAAGTATTCCCCTTCTCTTTTTGATTCTGGATAAGTTGTGGGAACCCTCTGACCATATTCGGGTTGCTGGCGTTTGCAAGCAATGGCGTGTTGCTGCGAAAGAATACAATCGCATAACGCAACGTTGGCGAAAAATCTCCGACATTGAGTTATCAGTGCTTTGTAATACGAGTAGTATGTGCCATGGCCATGGCTGGTTAGCCACAATGGATGTATTACCAGAGCCTATTTTGTTGGCGCAACCAAGAACTACGACTGTAATAACTCTGGTGAACCCTTTCAGAAAAACAGCGGTGCCCATTCGTCTCCCTCACTTGAGTTTCAGTTACCACCATATGCATGATGTCGTCCGAAAGTACTCCCCCGCGGTCTTATTCCCGAAGGTTATCTTATCTGAGGATCCCACATTGAATCCAGACAGTTATATGGTTGCAAAGAAAAGATTGGATTCACACCGGGAAAATTACACAGGAGATGTTATATTTCATAAAAGCCAAGTCTTTGCAGTTGCAGAGTCGGGAGACATTTTTTCCATTAATATCCGTAGGAAGCCAATAAAAGCAAAGATTCTTACCTCGCAAGAATGTCGATTCGCAAGTTCCGCTTATAAAGCTTATCTGGTGGAATCAACTAAGGGAGACTTGTTGCATGTTCGAAGATTGCATAAGGAAGAGAGATTCATGGTTTACAAGTTGGTGTTCAATGGGAGGGATGGATCTGTGCAGCATGTTGAATTGACAAGTCTTGGAGATGAGGTTATGTTCCTGAGTGACAATTGTGGTATCTCAGTTTTGGCTTCAAACTTTCCTGGGTGCCAACGCAATTCCATATATTACATAGATCATTGTGCAGAGAATAAAATAGGCCGTTTCAATTTAGAGGATGAAACCATTACAGGATATGATTACTCTTTGTCCATGCCAAAAGCGCTTTGGATTGCGCACCTGTTTACTGGGCTCTGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295

Protein Analysis

350

Amino Acids

39.83

Weight (kDa)

8.92

Isoelectric Point (pI)

50.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000064)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04090 FvH4_1g04091 FvH4_1g04110 FvH4_1g04440 FvH4_1g05330 FvH4_1g05332 FvH4_1g05560 FvH4_1g05580 FvH4_1g05590 FvH4_1g05611 FvH4_1g05892 FvH4_1g05900 FvH4_1g06763 FvH4_1g17860 FvH4_1g17860 FvH4_1g17861 FvH4_1g17880 FvH4_1g17902 FvH4_2g08142 FvH4_2g25110 FvH4_2g34380 FvH4_3g19131 FvH4_3g20501 FvH4_4g02770 FvH4_4g02771 FvH4_4g17610 FvH4_4g26951 FvH4_4g28330 FvH4_4g29110 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29690 FvH4_4g29691 FvH4_4g30221 FvH4_4g30230 FvH4_4g30240 FvH4_4g30602 FvH4_4g30610 FvH4_6g01351 FvH4_6g01780 FvH4_6g01890 FvH4_6g47150 FvH4_6g52260 FvH4_6g52703 FvH4_7g23210 FvH4_7g23240 FvH4_7g23350 FvH4_7g28790 FvH4_7g28820 FvH4_7g28830 FvH4_7g28840 FvH4_7g28890 FvH4_7g29040 FvH4_7g29050 FvH4_7g29990 FvH4_7g33871 FvH4_c6g00090
malus_domestica MD01G1180800.v1.1 MD01G1199400.v1.1 MD02G1310000.v1.1 MD04G1097400.v1.1 MD07G1264800.v1.1 MD07G1264900.v1.1 MD07G1270200.v1.1 MD07G1270300.v1.1 MD07G1270500.v1.1 MD10G1043600.v1.1 MD13G1047500.v1.1 MD13G1075200.v1.1
prunus_persica Prupe.1G009400_v2.0.a1 Prupe.1G076100_v2.0.a1 Prupe.1G158300_v2.0.a1 Prupe.1G208900_v2.0.a1 Prupe.1G273900_v2.0.a1 Prupe.2G253900_v2.0.a1 Prupe.2G255700_v2.0.a1 Prupe.2G256000_v2.0.a1 Prupe.2G280300_v2.0.a1 Prupe.2G290700_v2.0.a1 Prupe.3G068500_v2.0.a1 Prupe.4G112800_v2.0.a1 Prupe.5G168600_v2.0.a1 Prupe.5G168800_v2.0.a1 Prupe.5G169100_v2.0.a1 Prupe.8G049800_v2.0.a1
pyrus_communis pycom01g19330 pycom01g20930 pycom01g22010 pycom01g22020 pycom02g26090 pycom07g24330 pycom07g24720 pycom13g04150 pycom420g01320
rosa_chinensis RchiOBHm_Chr1g0324121 RchiOBHm_Chr1g0324251 RchiOBHm_Chr1g0343741 RchiOBHm_Chr1g0355031 RchiOBHm_Chr1g0359461 RchiOBHm_Chr1g0376351 RchiOBHm_Chr1g0376381 RchiOBHm_Chr2g0092531 RchiOBHm_Chr2g0108311 RchiOBHm_Chr2g0108321 RchiOBHm_Chr2g0108331 RchiOBHm_Chr2g0133991 RchiOBHm_Chr2g0156691 RchiOBHm_Chr2g0173801 RchiOBHm_Chr3g0449701 RchiOBHm_Chr3g0449861 RchiOBHm_Chr4g0417201 RchiOBHm_Chr4g0417931 RchiOBHm_Chr4g0424551 RchiOBHm_Chr4g0442921 RchiOBHm_Chr4g0442931 RchiOBHm_Chr5g0032171 RchiOBHm_Chr5g0032191 RchiOBHm_Chr5g0032221 RchiOBHm_Chr6g0258051 RchiOBHm_Chr6g0277851 RchiOBHm_Chr6g0291671 RchiOBHm_Chr6g0291691 RchiOBHm_Chr6g0312761 RchiOBHm_Chr7g0223801 RchiOBHm_Chr7g0224141
rosa_laevigata RLG00000001917 RLG00000001951 RLG00000005804 RLG00000006309 RLG00000006344 RLG00000006458 RLG00000016168 RLG00000016259 RLG00000016305 RLG00000016306 RLG00000019810 RLG00000022223 RLG00000026077 RLG00000026607 RLG00000029703 RLG00000033364 RLG00000034633 RLG00000034637
rosa_multiflora Rmu_co8010764.1_g000001 Rmu_co8262143.1_g000001 Rmu_co8346175.1_g000001 Rmu_sc0000096.1_g000016 Rmu_sc0000544.1_g000003 Rmu_sc0000591.1_g000007 Rmu_sc0000756.1_g000029 Rmu_sc0000841.1_g000017 Rmu_sc0000907.1_g000020 Rmu_sc0000954.1_g000004 Rmu_sc0001195.1_g000007 Rmu_sc0001198.1_g000008 Rmu_sc0001201.1_g000011 Rmu_sc0001201.1_g000013 Rmu_sc0001782.1_g000035 Rmu_sc0001904.1_g000004 Rmu_sc0001962.1_g000039 Rmu_sc0002113.1_g000021 Rmu_sc0002226.1_g000017 Rmu_sc0002226.1_g000020 Rmu_sc0002327.1_g000005 Rmu_sc0002372.1_g000010 Rmu_sc0002372.1_g000014 Rmu_sc0002687.1_g000005 Rmu_sc0003031.1_g000019 Rmu_sc0003076.1_g000014 Rmu_sc0004296.1_g000009 Rmu_sc0004540.1_g000009 Rmu_sc0005369.1_g000002 Rmu_sc0005375.1_g000003 Rmu_sc0005375.1_g000013 Rmu_sc0005742.1_g000008 Rmu_sc0005742.1_g000015 Rmu_sc0005742.1_g000021 Rmu_sc0007419.1_g000011 Rmu_sc0008909.1_g000008 Rmu_sc0010556.1_g000018 Rmu_sc0010999.1_g000008 Rmu_sc0017510.1_g000003 Rmu_sc0017556.1_g000001 Rmu_sc0017900.1_g000007 Rmu_sc0024249.1_g000001 Rmu_sc0032377.1_g000001 Rmu_sc0033569.1_g000001 Rmu_sc0036457.1_g000001 Rmu_sc0041304.1_g000001 Rmu_ssc0000204.1_g000011 Rmu_ssc0000438.1_g000056
rosa_roxburghii Rroxscaffold_1G00048250 Rroxscaffold_1G00048290 Rroxscaffold_2G00092800 Rroxscaffold_2G00110580 Rroxscaffold_2G00135240 Rroxscaffold_2G00135260 Rroxscaffold_2G00135300 Rroxscaffold_2G00149010 Rroxscaffold_2G00149160 Rroxscaffold_2G00149170 Rroxscaffold_2G00149630 Rroxscaffold_2G00151760 Rroxscaffold_2G00151790 Rroxscaffold_2G00152170 Rroxscaffold_3G00225510 Rroxscaffold_3G00249210 Rroxscaffold_4G00277020 Rroxscaffold_4G00281760 Rroxscaffold_4G00281770 Rroxscaffold_4G00281810 Rroxscaffold_4G00281820 Rroxscaffold_4G00282160 Rroxscaffold_4G00310340 Rroxscaffold_5G00361040 Rroxscaffold_5G00363770 Rroxscaffold_5G00366460 Rroxscaffold_5G00378270 Rroxscaffold_5G00378310 Rroxscaffold_5G00379550 Rroxscaffold_5G00379650 Rroxscaffold_6G00422110 Rroxscaffold_6G00427680 Rroxscaffold_7G00175850 Rroxscaffold_7G00175860 Rroxscaffold_7G00190720 Rroxscaffold_7G00190750 Rroxscaffold_7G00190830 Rroxscaffold_7G00196820
rosa_rugosa Rorug01G0395900 Rorug01G0444400 Rorug01G0488100 Rorug02G0001700 Rorug02G0021600 Rorug02G0025700 Rorug02G0152200 Rorug02G0271300 Rorug02G0455800 Rorug02G0572800 Rorug02G0576000 Rorug04G0146300 Rorug04G0172200 Rorug04G0172400 Rorug04G0311300 Rorug04G0312200 Rorug04G0312300 Rorug05G0129500 Rorug05G0129700 Rorug05G0250600 Rorug06G0112600 Rorug06G0220700 Rorug06G0220800 Rorug07G0114600
rosa_samantha Rh1DG066700 Rh1DG081800 Rh1DG184300 Rh1DG401900 Rh1DG402700 Rh1DG407000 Rh1DG407600 Rh2AG200800 Rh2AG201000 Rh2AG521000 Rh2BG066200 Rh2BG066300 Rh2BG073900 Rh2BG373500 Rh2BG417600 Rh2BG662600 Rh2DG066200 Rh2DG072000 Rh2DG390000 Rh2DG677700 Rh3CG020200 Rh3CG021500 Rh3CG081200 Rh4AG209600 Rh4AG362600 Rh4AG362700 Rh4AG397200 Rh4BG209800 Rh4BG209900 Rh4BG210000 Rh4CG220800 Rh4CG271300 Rh4CG388000 Rh4DG029800 Rh4DG368700 Rh4DG403900 Rh5AG035900 Rh5BG034600 Rh5BG034900 Rh5DG228700 Rh5DG228800 Rh6AG355900 Rh6CG083600 Rh6CG229000 Rh6CG229100 Rh6CG229700 Rh6CG346500 Rh6CG346600 Rh7AG362300 Rh7AG362400 Rh7AG363200 Rh7AG365100 Rh7CG380900 Rh7CG381000 Rh7CG381600 Rh7DG437600
rosa_wichuraiana Rw0G004580 Rw0G004590 Rw0G005750 Rw0G006640 Rw0G007050 Rw0G008040 Rw0G012200 Rw0G013750 Rw0G016590 Rw1G006090 Rw1G012040 Rw1G036130 Rw1G036270 Rw1G036290 Rw1G036420 Rw1G036430 Rw1G036590 Rw2G003560 Rw2G005130 Rw2G005980 Rw2G006090 Rw2G015980 Rw2G016000 Rw2G043010 Rw2G053520 Rw4G018760 Rw4G022000 Rw4G034250 Rw5G003280 Rw5G020380 Rw5G020390 Rw6G008210 Rw6G031000 Rw7G030830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 693
Acc16I TGCGCA 1 cut(s) 1026
AccB1I GGYRCC 2 cut(s) 379, 897
AccII CGCG 1 cut(s) 452
AciI CCGC 4 cut(s) 377, 450, 452, 687
AclI AACGTT 1 cut(s) 208
AclWI GGATC 3 cut(s) 479, 492, 808
AcoI YGGCCR 1 cut(s) 271
AfaI GTAC 1 cut(s) 443
AfeI AGCGCT 1 cut(s) 1014
AfiI CCNNNNNNNGG 1 cut(s) 145
AgsI TTSAA 5 cut(s) 496, 787, 818, 885, 958
AhlI ACTAGT 1 cut(s) 56
AjnI CCWGG 1 cut(s) 892
AluBI AGCT 1 cut(s) 698
AluI AGCT 1 cut(s) 698
Alw26I GTCTC 3 cut(s) 395, 600, 717
AlwI GGATC 3 cut(s) 479, 492, 808
Aor51HI AGCGCT 1 cut(s) 1014
AoxI GGCC 2 cut(s) 271, 949
ApeKI GCWGC 2 cut(s) 179, 808
AseI ATTAAT 1 cut(s) 621
Asp700I GAANNNNTTC 1 cut(s) 362
AspLEI GCGC 3 cut(s) 325, 1015, 1027
AsuC2I CCSGG 1 cut(s) 542
AsuHPI GGTGA 1 cut(s) 367
AsuII TTCGAA 1 cut(s) 739
BaeGI GKGCMC 1 cut(s) 384
BalI TGGCCA 1 cut(s) 273
BamHI GGATCC 1 cut(s) 484
BanI GGYRCC 2 cut(s) 379, 897
BanII GRGCYC 1 cut(s) 1044
BbvI GCAGC 2 cut(s) 166, 820
BccI CCATC 1 cut(s) 791
BceAI ACGGC 1 cut(s) 936
BcgI CGANNNNNNTGC 2 cut(s) 653, 687
BciT130I CCWGG 1 cut(s) 894
BcnI CCSGG 1 cut(s) 542
BcoDI GTCTC 3 cut(s) 395, 600, 717
BcuI ACTAGT 1 cut(s) 56
BfaI CTAG 2 cut(s) 57, 1048
BfoI RGCGCY 1 cut(s) 1016
BisI GCNGC 2 cut(s) 180, 809
BlsI GCNGC 2 cut(s) 181, 810
BmcAI AGTACT 1 cut(s) 443
Bme1390I CCNGG 2 cut(s) 542, 894
BmiI GGNNCC 4 cut(s) 129, 381, 486, 899
BmrFI CCNGG 2 cut(s) 542, 894
BmrI ACTGGG 1 cut(s) 1047
BmuI ACTGGG 1 cut(s) 1047
Bpu14I TTCGAA 1 cut(s) 739
BpuEI CTTGAG 1 cut(s) 421
BpuMI CCSGG 1 cut(s) 542
BsaJI CCNNGG 4 cut(s) 268, 274, 450, 893
BsaXI ACNNNNNCTCC 2 cut(s) 825, 855
Bsc4I CCNNNNNNNGG 1 cut(s) 145
Bse1I ACTGG 1 cut(s) 1042
Bse3DI GCAATG 1 cut(s) 173
BseBI CCWGG 1 cut(s) 894
BseDI CCNNGG 4 cut(s) 268, 274, 450, 893
BseGI GGATG 3 cut(s) 301, 802, 973
BseLI CCNNNNNNNGG 1 cut(s) 145
BseMI GCAATG 1 cut(s) 173
BseMII CTCAG 3 cut(s) 471, 842, 885
BseNI ACTGG 1 cut(s) 1042
BseSI GKGCMC 1 cut(s) 384
BseXI GCAGC 2 cut(s) 166, 820
BsgI GTGCAG 2 cut(s) 827, 954
Bsh1236I CGCG 1 cut(s) 452
BshFI GGCC 2 cut(s) 273, 951
BshNI GGYRCC 2 cut(s) 379, 897
BsiSI CCGG 1 cut(s) 541
BslI CCNNNNNNNGG 1 cut(s) 145
BsmAI GTCTC 3 cut(s) 395, 600, 717
BsmBI CGTCTC 1 cut(s) 395
BsnI GGCC 2 cut(s) 273, 951
Bsp119I TTCGAA 1 cut(s) 739
Bsp1286I GDGCHC 2 cut(s) 384, 1044
Bsp143I GATC 5 cut(s) 35, 76, 484, 800, 925
Bsp19I CCATGG 2 cut(s) 268, 274
BspACI CCGC 4 cut(s) 377, 450, 452, 687
BspANI GGCC 2 cut(s) 273, 951
BspCNI CTCAG 3 cut(s) 472, 843, 884
BspFNI CGCG 1 cut(s) 452
BspLI GGNNCC 4 cut(s) 129, 381, 486, 899
BspPI GGATC 3 cut(s) 479, 492, 808
BspT104I TTCGAA 1 cut(s) 739
BspT107I GGYRCC 2 cut(s) 379, 897
BsrDI GCAATG 1 cut(s) 173
BsrI ACTGG 1 cut(s) 1042
BssECI CCNNGG 4 cut(s) 268, 274, 450, 893
BssMI GATC 5 cut(s) 35, 76, 484, 800, 925
BssT1I CCWWGG 2 cut(s) 268, 274
Bst2UI CCWGG 1 cut(s) 894
Bst4CI ACNGT 2 cut(s) 343, 506
Bst6I CTCTTC 1 cut(s) 750
BstBI TTCGAA 1 cut(s) 739
BstC8I GCNNGC 2 cut(s) 154, 164
BstDEI CTNAG 4 cut(s) 480, 717, 851, 871
BstDSI CCRYGG 3 cut(s) 268, 274, 450
BstF5I GGATG 3 cut(s) 301, 802, 973
BstFNI CGCG 1 cut(s) 452
BstH2I RGCGCY 1 cut(s) 1016
BstHHI GCGC 3 cut(s) 325, 1015, 1027
BstKTI GATC 5 cut(s) 38, 79, 487, 803, 928
BstMAI GTCTC 3 cut(s) 395, 600, 717
BstMBI GATC 5 cut(s) 35, 76, 484, 800, 925
BstMWI GCNNNNNNNGC 4 cut(s) 211, 686, 695, 1012
BstNI CCWGG 1 cut(s) 894
BstNSI RCATGY 2 cut(s) 737, 815
BstSCI CCNGG 2 cut(s) 540, 892
BstSLI GKGCMC 1 cut(s) 384
BstUI CGCG 1 cut(s) 452
BstV1I GCAGC 2 cut(s) 166, 820
BstX2I RGATCY 2 cut(s) 484, 800
BstXI CCANNNNNNTGG 1 cut(s) 275
BstYI RGATCY 2 cut(s) 484, 800
BsuRI GGCC 2 cut(s) 273, 951
BtgI CCRYGG 3 cut(s) 268, 274, 450
BtsCI GGATG 3 cut(s) 301, 802, 973
BtsIMutI CAGTG 1 cut(s) 246
Cac8I GCNNGC 2 cut(s) 154, 164
CfoI GCGC 3 cut(s) 325, 1015, 1027
Cfr42I CCGCGG 1 cut(s) 453
Csp6I GTAC 1 cut(s) 442
CviAII CATG 8 cut(s) 15, 269, 275, 425, 734, 766, 812, 1003
CviQI GTAC 1 cut(s) 442
DdeI CTNAG 4 cut(s) 480, 717, 851, 871
DpnI GATC 5 cut(s) 37, 78, 486, 802, 927
DpnII GATC 5 cut(s) 35, 76, 484, 800, 925
EaeI YGGCCR 1 cut(s) 271
Eam1104I CTCTTC 1 cut(s) 750
EarI CTCTTC 1 cut(s) 750
Eco130I CCWWGG 2 cut(s) 268, 274
Eco24I GRGCYC 1 cut(s) 1044
Eco47III AGCGCT 1 cut(s) 1014
EcoRII CCWGG 1 cut(s) 892
EcoT14I CCWWGG 2 cut(s) 268, 274
EcoT22I ATGCAT 2 cut(s) 20, 426
EcoT38I GRGCYC 1 cut(s) 1044
ErhI CCWWGG 2 cut(s) 268, 274
Esp3I CGTCTC 1 cut(s) 395
FaeI CATG 8 cut(s) 18, 272, 278, 428, 737, 769, 815, 1006
FalI AAGNNNNNCTT 6 cut(s) 458, 490, 673, 705, 710, 742
FatI CATG 8 cut(s) 14, 268, 274, 424, 733, 765, 811, 1002
FauI CCCGC 1 cut(s) 457
FauNDI CATATG 1 cut(s) 420
Fnu4HI GCNGC 2 cut(s) 180, 809
FokI GGATG 3 cut(s) 308, 809, 980
FriOI GRGCYC 1 cut(s) 1044
Fsp4HI GCNGC 2 cut(s) 180, 809
FspBI CTAG 2 cut(s) 57, 1048
FspI TGCGCA 1 cut(s) 1026
GlaI GCGC 3 cut(s) 324, 1014, 1026
GluI GCNGC 2 cut(s) 180, 809
HaeII RGCGCY 1 cut(s) 1016
HaeIII GGCC 2 cut(s) 273, 951
HapII CCGG 1 cut(s) 541
HhaI GCGC 3 cut(s) 325, 1015, 1027
Hin1II CATG 8 cut(s) 18, 272, 278, 428, 737, 769, 815, 1006
Hin6I GCGC 3 cut(s) 323, 1013, 1025
HinP1I GCGC 3 cut(s) 323, 1013, 1025
HindIII AAGCTT 1 cut(s) 696
HinfI GANTC 8 cut(s) 109, 496, 533, 599, 652, 675, 710, 762
HpaII CCGG 1 cut(s) 541
HphI GGTGA 1 cut(s) 367
Hpy166II GTNNAC 3 cut(s) 358, 772, 1035
Hpy188I TCNGA 6 cut(s) 76, 136, 226, 368, 437, 481
Hpy188III TCNNGA 5 cut(s) 113, 463, 500, 603, 850
Hpy8I GTNNAC 3 cut(s) 358, 772, 1035
HpyAV CCTTC 2 cut(s) 107, 460
HpyCH4III ACNGT 2 cut(s) 343, 506
HpyCH4IV ACGT 1 cut(s) 208
HpyF10VI GCNNNNNNNGC 4 cut(s) 211, 686, 695, 1012
HpyF3I CTNAG 4 cut(s) 480, 717, 851, 871
HpySE526I ACGT 1 cut(s) 208
Hsp92II CATG 8 cut(s) 18, 272, 278, 428, 737, 769, 815, 1006
HspAI GCGC 3 cut(s) 323, 1013, 1025
KspI CCGCGG 1 cut(s) 453
Kzo9I GATC 5 cut(s) 35, 76, 484, 800, 925
Lsp1109I GCAGC 2 cut(s) 166, 820
MaeI CTAG 2 cut(s) 57, 1048
MaeII ACGT 1 cut(s) 208
MaeIII GTNAC 2 cut(s) 410, 854
MalI GATC 5 cut(s) 37, 78, 486, 802, 927
MboI GATC 5 cut(s) 35, 76, 484, 800, 925
MboII GAAGA 2 cut(s) 753, 767
MfeI CAATTG 1 cut(s) 859
MflI RGATCY 2 cut(s) 484, 800
MhlI GDGCHC 2 cut(s) 384, 1044
MlsI TGGCCA 1 cut(s) 273
MluCI AATT 5 cut(s) 547, 818, 859, 907, 958
MluNI TGGCCA 1 cut(s) 273
MlyI GAGTC 1 cut(s) 608
MmeI TCCRAC 1 cut(s) 249
MnlI CCTC 7 cut(s) 142, 405, 475, 670, 786, 832, 958
Mox20I TGGCCA 1 cut(s) 273
Mph1103I ATGCAT 2 cut(s) 20, 426
MroXI GAANNNNTTC 1 cut(s) 362
MscI TGGCCA 1 cut(s) 273
MseI TTAA 1 cut(s) 621
MslI CAYNNNNRTG 2 cut(s) 273, 423
Msp20I TGGCCA 1 cut(s) 273
MspA1I CMGCKG 2 cut(s) 377, 452
MspI CCGG 1 cut(s) 541
MspR9I CCNGG 2 cut(s) 542, 894
MunI CAATTG 1 cut(s) 859
MvaI CCWGG 1 cut(s) 894
MvnI CGCG 1 cut(s) 452
MwoI GCNNNNNNNGC 4 cut(s) 211, 686, 695, 1012
NciI CCSGG 1 cut(s) 542
NcoI CCATGG 2 cut(s) 268, 274
NdeI CATATG 1 cut(s) 420
NdeII GATC 5 cut(s) 35, 76, 484, 800, 925
NlaIII CATG 8 cut(s) 18, 272, 278, 428, 737, 769, 815, 1006
NlaIV GGNNCC 4 cut(s) 129, 381, 486, 899
NmuCI GTSAC 1 cut(s) 854
NsbI TGCGCA 1 cut(s) 1026
NsiI ATGCAT 2 cut(s) 20, 426
NspI RCATGY 2 cut(s) 737, 815
NspV TTCGAA 1 cut(s) 739
PdmI GAANNNNTTC 1 cut(s) 362
PfeI GAWTC 7 cut(s) 109, 496, 533, 652, 675, 710, 762
PkrI GCNGC 2 cut(s) 181, 810
PleI GAGTC 1 cut(s) 607
PpsI GAGTC 1 cut(s) 607
PshBI ATTAAT 1 cut(s) 621
PsiI TTATAA 1 cut(s) 693
Psp1406I AACGTT 1 cut(s) 208
Psp6I CCWGG 1 cut(s) 892
PspGI CCWGG 1 cut(s) 892
PspN4I GGNNCC 4 cut(s) 129, 381, 486, 899
PsuI RGATCY 2 cut(s) 484, 800
RsaI GTAC 1 cut(s) 443
RsaNI GTAC 1 cut(s) 442
RseI CAYNNNNRTG 2 cut(s) 273, 423
SacII CCGCGG 1 cut(s) 453
SaqAI TTAA 1 cut(s) 621
SatI GCNGC 2 cut(s) 180, 809
Sau3AI GATC 5 cut(s) 35, 76, 484, 800, 925
ScaI AGTACT 1 cut(s) 443
SchI GAGTC 1 cut(s) 608
ScrFI CCNGG 2 cut(s) 542, 894
SduI GDGCHC 2 cut(s) 384, 1044
SetI ASST 6 cut(s) 211, 471, 662, 700, 843, 1032
Sfr303I CCGCGG 1 cut(s) 453
SfuI TTCGAA 1 cut(s) 739
SgrBI CCGCGG 1 cut(s) 453
SmiMI CAYNNNNRTG 2 cut(s) 273, 423
SmlI CTYRAG 1 cut(s) 400
SmoI CTYRAG 1 cut(s) 400
SpeI ACTAGT 1 cut(s) 56
Sse9I AATT 5 cut(s) 547, 818, 859, 907, 958
SsiI CCGC 4 cut(s) 377, 450, 452, 687
SspMI CTAG 2 cut(s) 57, 1048
StyD4I CCNGG 2 cut(s) 540, 892
StyI CCWWGG 2 cut(s) 268, 274
TaaI ACNGT 2 cut(s) 343, 506
TaiI ACGT 1 cut(s) 211
TaqI TCGA 2 cut(s) 673, 739
TasI AATT 5 cut(s) 547, 818, 859, 907, 958
TatI WGTACW 1 cut(s) 441
TfiI GAWTC 7 cut(s) 109, 496, 533, 652, 675, 710, 762
Tru1I TTAA 1 cut(s) 621
Tru9I TTAA 1 cut(s) 621
TscAI CASTG 1 cut(s) 246
TseFI GTSAC 1 cut(s) 854
TseI GCWGC 2 cut(s) 179, 808
Tsp45I GTSAC 1 cut(s) 854
TspDTI ATGAA 3 cut(s) 560, 754, 984
TspGWI ACGGA 1 cut(s) 617
TspRI CASTG 1 cut(s) 246
VspI ATTAAT 1 cut(s) 621
XceI RCATGY 2 cut(s) 737, 815
XcmI CCANNNNNNNNNTGG 1 cut(s) 1014
XmnI GAANNNNTTC 1 cut(s) 362
XspI CTAG 2 cut(s) 57, 1048
ZrmI AGTACT 1 cut(s) 443
Zsp2I ATGCAT 2 cut(s) 20, 426
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.