Rh4CG388000

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
OG0000064
Physical Location & Seq
Forward (+)
63938004 .. 63941200
3197 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG388000.1

Sequence Viewer

Length: 975 bp
ATGTCGGTCGTGGACGAGTCTCCCGTGAAACATGATCTGGTGGTATTGTATCACAATCCCTATACTGGCGTCGAAGTTTACTCCATGCTTGAGGTCCACCCGGATAACAAGAATAAGCGACGTTTGGAGTTTGAGCTCCCTCCCCATAGGTCAATTAAGAAGCTCCACCGAATTACCTGCAACACTAGTTGCTCATCTGTATCAGAATGGGCAAGTCTTCCGAAGGACATTCTCCTTTTGATGTTGCACAAGTTGTTCGAACCCATTGACCATGTTCGTCTGGCTGCTGTTTGCAACCATTGGCATAAAGTCTCCAAAGAGCATAATCATACAACTCAGCGCTGGTGCAACCTACTTCCAATGCTCATGATCCCCCCCTCCCGCTCCCCTAGCCGAACGAAGCAAATGGTTTATAGCCTTTCTGAAGGAGAAACTTATACGAACGTTCAATTACCGGTGCCTTATGATAGGAGGTGCAGTGGCTCCAGCCATGGTTGGTTGGCCACAGCACATGAGAATTTCTCCATAACTCTTTTGAATCCTTTCAGAAAAGCAGCGGCCATTCATTTGCCTCCCTTGACAACCCCACATAATCTCCAAGACTGCCAATTTGGGTTGCAGAAGTTCCAGGATCAGTTGAAGAAGCGCTACGACTATTATGTCTTTGGACTAGGGGGAATAATTGCGTCAGTTGATGTCAATAGTAGTAATGATCCTTCGCGGCCGCCAAAAGCAATTCCACTTACACGTTTACGACCAATGGAACACCCTCTGTTCCCATACAAAGCAGATAAGGCATATCTTGTTGAATCAACCAATGGAGACTTGCTGCATGTTCGAAGGTTTTTGAAACGAAAGGAAGGTCTTGATCAAAAGCTGGGGGTTATCAATTTTGTGGTATACAAGGTGTTATTCAACGACAACGATGGGACCTTTGTGAGGCAGGATCTGTGCATGGTTACGGGATATTTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295 F-box F-box-like

Protein Analysis

324

Amino Acids

37.3

Weight (kDa)

9.12

Isoelectric Point (pI)

49.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 70 - 106 1.4e-06 F-box-like
Beta-prop_KIB1-4 PF03478 137 - 196 2.7e-09 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000064)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04090 FvH4_1g04091 FvH4_1g04110 FvH4_1g04440 FvH4_1g05330 FvH4_1g05332 FvH4_1g05560 FvH4_1g05580 FvH4_1g05590 FvH4_1g05611 FvH4_1g05892 FvH4_1g05900 FvH4_1g06763 FvH4_1g17860 FvH4_1g17860 FvH4_1g17861 FvH4_1g17880 FvH4_1g17902 FvH4_2g08142 FvH4_2g25110 FvH4_2g34380 FvH4_3g19131 FvH4_3g20501 FvH4_4g02770 FvH4_4g02771 FvH4_4g17610 FvH4_4g26951 FvH4_4g28330 FvH4_4g29110 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29690 FvH4_4g29691 FvH4_4g30221 FvH4_4g30230 FvH4_4g30240 FvH4_4g30602 FvH4_4g30610 FvH4_6g01351 FvH4_6g01780 FvH4_6g01890 FvH4_6g47150 FvH4_6g52260 FvH4_6g52703 FvH4_7g23210 FvH4_7g23240 FvH4_7g23350 FvH4_7g28790 FvH4_7g28820 FvH4_7g28830 FvH4_7g28840 FvH4_7g28890 FvH4_7g29040 FvH4_7g29050 FvH4_7g29990 FvH4_7g33871 FvH4_c6g00090
malus_domestica MD01G1180800.v1.1 MD01G1199400.v1.1 MD02G1310000.v1.1 MD04G1097400.v1.1 MD07G1264800.v1.1 MD07G1264900.v1.1 MD07G1270200.v1.1 MD07G1270300.v1.1 MD07G1270500.v1.1 MD10G1043600.v1.1 MD13G1047500.v1.1 MD13G1075200.v1.1
prunus_persica Prupe.1G009400_v2.0.a1 Prupe.1G076100_v2.0.a1 Prupe.1G158300_v2.0.a1 Prupe.1G208900_v2.0.a1 Prupe.1G273900_v2.0.a1 Prupe.2G253900_v2.0.a1 Prupe.2G255700_v2.0.a1 Prupe.2G256000_v2.0.a1 Prupe.2G280300_v2.0.a1 Prupe.2G290700_v2.0.a1 Prupe.3G068500_v2.0.a1 Prupe.4G112800_v2.0.a1 Prupe.5G168600_v2.0.a1 Prupe.5G168800_v2.0.a1 Prupe.5G169100_v2.0.a1 Prupe.8G049800_v2.0.a1
pyrus_communis pycom01g19330 pycom01g20930 pycom01g22010 pycom01g22020 pycom02g26090 pycom07g24330 pycom07g24720 pycom13g04150 pycom420g01320
rosa_chinensis RchiOBHm_Chr1g0324121 RchiOBHm_Chr1g0324251 RchiOBHm_Chr1g0343741 RchiOBHm_Chr1g0355031 RchiOBHm_Chr1g0359461 RchiOBHm_Chr1g0376351 RchiOBHm_Chr1g0376381 RchiOBHm_Chr2g0092531 RchiOBHm_Chr2g0108311 RchiOBHm_Chr2g0108321 RchiOBHm_Chr2g0108331 RchiOBHm_Chr2g0133991 RchiOBHm_Chr2g0156691 RchiOBHm_Chr2g0173801 RchiOBHm_Chr3g0449701 RchiOBHm_Chr3g0449861 RchiOBHm_Chr4g0417201 RchiOBHm_Chr4g0417931 RchiOBHm_Chr4g0424551 RchiOBHm_Chr4g0442921 RchiOBHm_Chr4g0442931 RchiOBHm_Chr5g0032171 RchiOBHm_Chr5g0032191 RchiOBHm_Chr5g0032221 RchiOBHm_Chr6g0258051 RchiOBHm_Chr6g0277851 RchiOBHm_Chr6g0291671 RchiOBHm_Chr6g0291691 RchiOBHm_Chr6g0312761 RchiOBHm_Chr7g0223801 RchiOBHm_Chr7g0224141
rosa_laevigata RLG00000001917 RLG00000001951 RLG00000005804 RLG00000006309 RLG00000006344 RLG00000006458 RLG00000016168 RLG00000016259 RLG00000016305 RLG00000016306 RLG00000019810 RLG00000022223 RLG00000026077 RLG00000026607 RLG00000029703 RLG00000033364 RLG00000034633 RLG00000034637
rosa_multiflora Rmu_co8010764.1_g000001 Rmu_co8262143.1_g000001 Rmu_co8346175.1_g000001 Rmu_sc0000096.1_g000016 Rmu_sc0000544.1_g000003 Rmu_sc0000591.1_g000007 Rmu_sc0000756.1_g000029 Rmu_sc0000841.1_g000017 Rmu_sc0000907.1_g000020 Rmu_sc0000954.1_g000004 Rmu_sc0001195.1_g000007 Rmu_sc0001198.1_g000008 Rmu_sc0001201.1_g000011 Rmu_sc0001201.1_g000013 Rmu_sc0001782.1_g000035 Rmu_sc0001904.1_g000004 Rmu_sc0001962.1_g000039 Rmu_sc0002113.1_g000021 Rmu_sc0002226.1_g000017 Rmu_sc0002226.1_g000020 Rmu_sc0002327.1_g000005 Rmu_sc0002372.1_g000010 Rmu_sc0002372.1_g000014 Rmu_sc0002687.1_g000005 Rmu_sc0003031.1_g000019 Rmu_sc0003076.1_g000014 Rmu_sc0004296.1_g000009 Rmu_sc0004540.1_g000009 Rmu_sc0005369.1_g000002 Rmu_sc0005375.1_g000003 Rmu_sc0005375.1_g000013 Rmu_sc0005742.1_g000008 Rmu_sc0005742.1_g000015 Rmu_sc0005742.1_g000021 Rmu_sc0007419.1_g000011 Rmu_sc0008909.1_g000008 Rmu_sc0010556.1_g000018 Rmu_sc0010999.1_g000008 Rmu_sc0017510.1_g000003 Rmu_sc0017556.1_g000001 Rmu_sc0017900.1_g000007 Rmu_sc0024249.1_g000001 Rmu_sc0032377.1_g000001 Rmu_sc0033569.1_g000001 Rmu_sc0036457.1_g000001 Rmu_sc0041304.1_g000001 Rmu_ssc0000204.1_g000011 Rmu_ssc0000438.1_g000056
rosa_roxburghii Rroxscaffold_1G00048250 Rroxscaffold_1G00048290 Rroxscaffold_2G00092800 Rroxscaffold_2G00110580 Rroxscaffold_2G00135240 Rroxscaffold_2G00135260 Rroxscaffold_2G00135300 Rroxscaffold_2G00149010 Rroxscaffold_2G00149160 Rroxscaffold_2G00149170 Rroxscaffold_2G00149630 Rroxscaffold_2G00151760 Rroxscaffold_2G00151790 Rroxscaffold_2G00152170 Rroxscaffold_3G00225510 Rroxscaffold_3G00249210 Rroxscaffold_4G00277020 Rroxscaffold_4G00281760 Rroxscaffold_4G00281770 Rroxscaffold_4G00281810 Rroxscaffold_4G00281820 Rroxscaffold_4G00282160 Rroxscaffold_4G00310340 Rroxscaffold_5G00361040 Rroxscaffold_5G00363770 Rroxscaffold_5G00366460 Rroxscaffold_5G00378270 Rroxscaffold_5G00378310 Rroxscaffold_5G00379550 Rroxscaffold_5G00379650 Rroxscaffold_6G00422110 Rroxscaffold_6G00427680 Rroxscaffold_7G00175850 Rroxscaffold_7G00175860 Rroxscaffold_7G00190720 Rroxscaffold_7G00190750 Rroxscaffold_7G00190830 Rroxscaffold_7G00196820
rosa_rugosa Rorug01G0395900 Rorug01G0444400 Rorug01G0488100 Rorug02G0001700 Rorug02G0021600 Rorug02G0025700 Rorug02G0152200 Rorug02G0271300 Rorug02G0455800 Rorug02G0572800 Rorug02G0576000 Rorug04G0146300 Rorug04G0172200 Rorug04G0172400 Rorug04G0311300 Rorug04G0312200 Rorug04G0312300 Rorug05G0129500 Rorug05G0129700 Rorug05G0250600 Rorug06G0112600 Rorug06G0220700 Rorug06G0220800 Rorug07G0114600
rosa_samantha Rh1DG066700 Rh1DG081800 Rh1DG184300 Rh1DG401900 Rh1DG402700 Rh1DG407000 Rh1DG407600 Rh2AG200800 Rh2AG201000 Rh2AG521000 Rh2BG066200 Rh2BG066300 Rh2BG073900 Rh2BG373500 Rh2BG417600 Rh2BG662600 Rh2DG066200 Rh2DG072000 Rh2DG390000 Rh2DG677700 Rh3CG020200 Rh3CG021500 Rh3CG081200 Rh4AG209600 Rh4AG362600 Rh4AG362700 Rh4AG397200 Rh4BG209800 Rh4BG209900 Rh4BG210000 Rh4CG220800 Rh4CG271300 Rh4CG388000 Rh4DG029800 Rh4DG368700 Rh4DG403900 Rh5AG035900 Rh5BG034600 Rh5BG034900 Rh5DG228700 Rh5DG228800 Rh6AG355900 Rh6CG083600 Rh6CG229000 Rh6CG229100 Rh6CG229700 Rh6CG346500 Rh6CG346600 Rh7AG362300 Rh7AG362400 Rh7AG363200 Rh7AG365100 Rh7CG380900 Rh7CG381000 Rh7CG381600 Rh7DG437600
rosa_wichuraiana Rw0G004580 Rw0G004590 Rw0G005750 Rw0G006640 Rw0G007050 Rw0G008040 Rw0G012200 Rw0G013750 Rw0G016590 Rw1G006090 Rw1G012040 Rw1G036130 Rw1G036270 Rw1G036290 Rw1G036420 Rw1G036430 Rw1G036590 Rw2G003560 Rw2G005130 Rw2G005980 Rw2G006090 Rw2G015980 Rw2G016000 Rw2G043010 Rw2G053520 Rw4G018760 Rw4G022000 Rw4G034250 Rw5G003280 Rw5G020380 Rw5G020390 Rw6G008210 Rw6G031000 Rw7G030830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 659
Acc36I ACCTGC 1 cut(s) 185
AccB1I GGYRCC 1 cut(s) 457
AccBSI CCGCTC 1 cut(s) 384
AccI GTMKAC 1 cut(s) 900
AccII CGCG 1 cut(s) 721
AciI CCGC 4 cut(s) 382, 557, 721, 725
AclI AACGTT 1 cut(s) 444
AclWI GGATC 4 cut(s) 364, 639, 707, 954
AcoI YGGCCR 3 cut(s) 501, 558, 722
AcsI RAATTY 1 cut(s) 517
AcuI CTGAAG 1 cut(s) 444
AcyI GRCGYC 1 cut(s) 69
AfeI AGCGCT 2 cut(s) 341, 647
AfiI CCNNNNNNNGG 2 cut(s) 65, 939
AflIII ACRYGT 1 cut(s) 746
AgeI ACCGGT 1 cut(s) 454
AgsI TTSAA 6 cut(s) 449, 538, 640, 809, 850, 916
AhlI ACTAGT 1 cut(s) 185
AjnI CCWGG 1 cut(s) 627
AluBI AGCT 3 cut(s) 136, 163, 877
AluI AGCT 3 cut(s) 136, 163, 877
Alw21I GWGCWC 1 cut(s) 138
Alw26I GTCTC 3 cut(s) 24, 316, 816
AlwI GGATC 4 cut(s) 364, 639, 707, 954
AlwNI CAGNNNCTG 1 cut(s) 949
Aor51HI AGCGCT 2 cut(s) 341, 647
AoxI GGCC 3 cut(s) 501, 558, 722
ApeKI GCWGC 3 cut(s) 284, 554, 829
ApoI RAATTY 1 cut(s) 517
ArsI GACNNNNNNTTYG 4 cut(s) 593, 625, 847, 879
AsiGI ACCGGT 1 cut(s) 454
Asp700I GAANNNNTTC 1 cut(s) 542
AspLEI GCGC 2 cut(s) 342, 648
AspS9I GGNCC 2 cut(s) 94, 930
AsuC2I CCSGG 1 cut(s) 101
AsuII TTCGAA 2 cut(s) 258, 838
AvaII GGWCC 2 cut(s) 94, 930
BalI TGGCCA 1 cut(s) 503
BanI GGYRCC 1 cut(s) 457
BanII GRGCYC 1 cut(s) 138
BarI GAAGNNNNNNTAC 4 cut(s) 632, 664, 700, 732
BbsI GAAGAC 1 cut(s) 209
Bbv12I GWGCWC 1 cut(s) 138
BbvI GCAGC 3 cut(s) 271, 566, 816
BccI CCATC 1 cut(s) 920
BcgI CGANNNNNNTGC 2 cut(s) 159, 193
BciT130I CCWGG 1 cut(s) 629
BclI TGATCA 1 cut(s) 868
BcnI CCSGG 1 cut(s) 101
BcoDI GTCTC 3 cut(s) 24, 316, 816
BcuI ACTAGT 1 cut(s) 185
BfaI CTAG 3 cut(s) 186, 390, 671
BfoI RGCGCY 2 cut(s) 343, 649
BfuAI ACCTGC 1 cut(s) 185
BisI GCNGC 6 cut(s) 285, 555, 558, 722, 725, 830
BlsI GCNGC 6 cut(s) 286, 556, 559, 723, 726, 831
Bme1390I CCNGG 2 cut(s) 101, 629
Bme18I GGWCC 2 cut(s) 94, 930
BmgT120I GGNCC 2 cut(s) 94, 930
BmiI GGNNCC 3 cut(s) 459, 484, 931
BmrFI CCNGG 2 cut(s) 101, 629
BpiI GAAGAC 1 cut(s) 209
BplI GAGNNNNNCTC 2 cut(s) 506, 538
BpmI CTGGAG 1 cut(s) 469
Bpu14I TTCGAA 2 cut(s) 258, 838
BpuEI CTTGAG 1 cut(s) 110
BpuMI CCSGG 1 cut(s) 101
BsaHI GRCGYC 1 cut(s) 69
BsaJI CCNNGG 1 cut(s) 490
BsaWI WCCGGW 1 cut(s) 454
BsaXI ACNNNNNCTCC 4 cut(s) 463, 493, 579, 609
Bsc4I CCNNNNNNNGG 2 cut(s) 65, 939
Bse118I RCCGGY 1 cut(s) 454
Bse1I ACTGG 1 cut(s) 70
BseBI CCWGG 1 cut(s) 629
BseDI CCNNGG 1 cut(s) 490
BseLI CCNNNNNNNGG 2 cut(s) 65, 939
BseMII CTCAG 1 cut(s) 350
BseNI ACTGG 1 cut(s) 70
BseX3I CGGCCG 1 cut(s) 722
BseXI GCAGC 3 cut(s) 271, 566, 816
BseYI CCCAGC 1 cut(s) 877
BsgI GTGCAG 1 cut(s) 496
Bsh1236I CGCG 1 cut(s) 721
Bsh1285I CGRYCG 2 cut(s) 9, 725
BshFI GGCC 3 cut(s) 503, 560, 724
BshNI GGYRCC 1 cut(s) 457
BshTI ACCGGT 1 cut(s) 454
BsiEI CGRYCG 2 cut(s) 9, 725
BsiHKAI GWGCWC 1 cut(s) 138
BsiSI CCGG 2 cut(s) 101, 455
BslFI GGGAC 1 cut(s) 943
BslI CCNNNNNNNGG 2 cut(s) 65, 939
BsmAI GTCTC 3 cut(s) 24, 316, 816
BsmFI GGGAC 1 cut(s) 943
BsnI GGCC 3 cut(s) 503, 560, 724
Bsp119I TTCGAA 2 cut(s) 258, 838
Bsp1286I GDGCHC 1 cut(s) 138
Bsp143I GATC 6 cut(s) 34, 369, 631, 712, 868, 946
Bsp19I CCATGG 1 cut(s) 490
BspACI CCGC 4 cut(s) 382, 557, 721, 725
BspANI GGCC 3 cut(s) 503, 560, 724
BspCNI CTCAG 1 cut(s) 349
BspFNI CGCG 1 cut(s) 721
BspHI TCATGA 1 cut(s) 366
BspLI GGNNCC 3 cut(s) 459, 484, 931
BspMI ACCTGC 1 cut(s) 185
BspPI GGATC 4 cut(s) 364, 639, 707, 954
BspT104I TTCGAA 2 cut(s) 258, 838
BspT107I GGYRCC 1 cut(s) 457
BsrBI CCGCTC 1 cut(s) 384
BsrFI RCCGGY 1 cut(s) 454
BsrI ACTGG 1 cut(s) 70
BssAI RCCGGY 1 cut(s) 454
BssECI CCNNGG 1 cut(s) 490
BssMI GATC 6 cut(s) 34, 369, 631, 712, 868, 946
BssNAI GTATAC 1 cut(s) 901
BssNI GRCGYC 1 cut(s) 69
BssT1I CCWWGG 1 cut(s) 490
Bst1107I GTATAC 1 cut(s) 901
Bst2UI CCWGG 1 cut(s) 629
BstACI GRCGYC 1 cut(s) 69
BstBI TTCGAA 2 cut(s) 258, 838
BstDEI CTNAG 1 cut(s) 336
BstDSI CCRYGG 1 cut(s) 490
BstENI CCTNNNNNAGG 1 cut(s) 937
BstFNI CGCG 1 cut(s) 721
BstH2I RGCGCY 2 cut(s) 343, 649
BstHHI GCGC 2 cut(s) 342, 648
BstKTI GATC 6 cut(s) 37, 372, 634, 715, 871, 949
BstMAI GTCTC 3 cut(s) 24, 316, 816
BstMBI GATC 6 cut(s) 34, 369, 631, 712, 868, 946
BstMCI CGRYCG 2 cut(s) 9, 725
BstMWI GCNNNNNNNGC 2 cut(s) 390, 794
BstNI CCWGG 1 cut(s) 629
BstNSI RCATGY 1 cut(s) 836
BstSCI CCNGG 2 cut(s) 99, 627
BstUI CGCG 1 cut(s) 721
BstV1I GCAGC 3 cut(s) 271, 566, 816
BstV2I GAAGAC 1 cut(s) 209
BstX2I RGATCY 1 cut(s) 946
BstYI RGATCY 1 cut(s) 946
BstZ17I GTATAC 1 cut(s) 901
BstZI CGGCCG 1 cut(s) 722
BsuRI GGCC 3 cut(s) 503, 560, 724
BtgI CCRYGG 1 cut(s) 490
BtsI GCAGTG 1 cut(s) 484
BtsIMutI CAGTG 1 cut(s) 484
BveI ACCTGC 1 cut(s) 185
CaiI CAGNNNCTG 1 cut(s) 949
CciI TCATGA 1 cut(s) 366
CciNI GCGGCCGC 1 cut(s) 722
CfoI GCGC 2 cut(s) 342, 648
Cfr10I RCCGGY 1 cut(s) 454
Cfr13I GGNCC 2 cut(s) 94, 930
CseI GACGC 2 cut(s) 58, 675
CspAI ACCGGT 1 cut(s) 454
CviAII CATG 8 cut(s) 32, 85, 272, 367, 491, 512, 833, 955
DdeI CTNAG 1 cut(s) 336
DpnI GATC 6 cut(s) 36, 371, 633, 714, 870, 948
DpnII GATC 6 cut(s) 34, 369, 631, 712, 868, 946
DrdI GACNNNNNNGTC 1 cut(s) 659
DseDI GACNNNNNNGTC 1 cut(s) 659
EaeI YGGCCR 3 cut(s) 501, 558, 722
EagI CGGCCG 1 cut(s) 722
Ecl136II GAGCTC 1 cut(s) 136
EclXI CGGCCG 1 cut(s) 722
Eco130I CCWWGG 1 cut(s) 490
Eco24I GRGCYC 1 cut(s) 138
Eco47I GGWCC 2 cut(s) 94, 930
Eco47III AGCGCT 2 cut(s) 341, 647
Eco52I CGGCCG 1 cut(s) 722
Eco53kI GAGCTC 1 cut(s) 136
Eco57I CTGAAG 1 cut(s) 444
EcoICRI GAGCTC 1 cut(s) 136
EcoNI CCTNNNNNAGG 1 cut(s) 937
EcoO109I RGGNCCY 1 cut(s) 930
EcoRII CCWGG 1 cut(s) 627
EcoT14I CCWWGG 1 cut(s) 490
EcoT38I GRGCYC 1 cut(s) 138
ErhI CCWWGG 1 cut(s) 490
FaeI CATG 8 cut(s) 35, 88, 275, 370, 494, 515, 836, 958
FaqI GGGAC 1 cut(s) 943
FatI CATG 8 cut(s) 31, 84, 271, 366, 490, 511, 832, 954
FauI CCCGC 1 cut(s) 389
FbaI TGATCA 1 cut(s) 868
FblI GTMKAC 1 cut(s) 900
Fnu4HI GCNGC 6 cut(s) 285, 555, 558, 722, 725, 830
FriOI GRGCYC 1 cut(s) 138
Fsp4HI GCNGC 6 cut(s) 285, 555, 558, 722, 725, 830
FspBI CTAG 3 cut(s) 186, 390, 671
GlaI GCGC 2 cut(s) 341, 647
GluI GCNGC 6 cut(s) 285, 555, 558, 722, 725, 830
GsaI CCCAGC 1 cut(s) 881
GsuI CTGGAG 1 cut(s) 469
HaeII RGCGCY 2 cut(s) 343, 649
HaeIII GGCC 3 cut(s) 503, 560, 724
HapII CCGG 2 cut(s) 101, 455
HgaI GACGC 2 cut(s) 58, 675
HhaI GCGC 2 cut(s) 342, 648
Hin1I GRCGYC 1 cut(s) 69
Hin1II CATG 8 cut(s) 35, 88, 275, 370, 494, 515, 836, 958
Hin6I GCGC 2 cut(s) 340, 646
HinP1I GCGC 2 cut(s) 340, 646
HinfI GANTC 3 cut(s) 17, 538, 809
HpaII CCGG 2 cut(s) 101, 455
Hpy166II GTNNAC 5 cut(s) 13, 79, 97, 752, 901
Hpy188I TCNGA 4 cut(s) 205, 222, 424, 548
Hpy188III TCNNGA 2 cut(s) 367, 866
Hpy8I GTNNAC 5 cut(s) 13, 79, 97, 752, 901
Hpy99I CGWCG 2 cut(s) 74, 123
HpyAV CCTTC 5 cut(s) 217, 419, 726, 834, 854
HpyCH4IV ACGT 3 cut(s) 121, 444, 748
HpyCH4V TGCA 8 cut(s) 180, 247, 294, 348, 477, 619, 832, 954
HpyF10VI GCNNNNNNNGC 2 cut(s) 390, 794
HpyF3I CTNAG 1 cut(s) 336
HpySE526I ACGT 3 cut(s) 121, 444, 748
Hsp92I GRCGYC 1 cut(s) 69
Hsp92II CATG 8 cut(s) 35, 88, 275, 370, 494, 515, 836, 958
HspAI GCGC 2 cut(s) 340, 646
Ksp22I TGATCA 1 cut(s) 868
Kzo9I GATC 6 cut(s) 34, 369, 631, 712, 868, 946
LmnI GCTCC 4 cut(s) 141, 168, 389, 488
Lsp1109I GCAGC 3 cut(s) 271, 566, 816
MaeI CTAG 3 cut(s) 186, 390, 671
MaeII ACGT 3 cut(s) 121, 444, 748
MaeIII GTNAC 1 cut(s) 958
MalI GATC 6 cut(s) 36, 371, 633, 714, 870, 948
MbiI CCGCTC 1 cut(s) 384
MboI GATC 6 cut(s) 34, 369, 631, 712, 868, 946
MboII GAAGA 2 cut(s) 209, 652
MflI RGATCY 1 cut(s) 946
MhlI GDGCHC 1 cut(s) 138
MlsI TGGCCA 1 cut(s) 503
MluCI AATT 8 cut(s) 153, 171, 449, 517, 608, 681, 735, 889
MluNI TGGCCA 1 cut(s) 503
MlyI GAGTC 1 cut(s) 26
MnlI CCTC 7 cut(s) 85, 150, 388, 465, 582, 780, 933
Mox20I TGGCCA 1 cut(s) 503
MroXI GAANNNNTTC 1 cut(s) 542
MscI TGGCCA 1 cut(s) 503
MseI TTAA 2 cut(s) 156, 973
Msp20I TGGCCA 1 cut(s) 503
MspA1I CMGCKG 1 cut(s) 557
MspI CCGG 2 cut(s) 101, 455
MspR9I CCNGG 2 cut(s) 101, 629
MvaI CCWGG 1 cut(s) 629
MvnI CGCG 1 cut(s) 721
MwoI GCNNNNNNNGC 2 cut(s) 390, 794
NciI CCSGG 1 cut(s) 101
NcoI CCATGG 1 cut(s) 490
NdeII GATC 6 cut(s) 34, 369, 631, 712, 868, 946
NlaIII CATG 8 cut(s) 35, 88, 275, 370, 494, 515, 836, 958
NlaIV GGNNCC 3 cut(s) 459, 484, 931
NotI GCGGCCGC 1 cut(s) 722
NspI RCATGY 1 cut(s) 836
NspV TTCGAA 2 cut(s) 258, 838
PagI TCATGA 1 cut(s) 366
PcsI WCGNNNNNNNCGW 1 cut(s) 21
PdmI GAANNNNTTC 1 cut(s) 542
PfeI GAWTC 2 cut(s) 538, 809
PfoI TCCNGGA 1 cut(s) 627
PinAI ACCGGT 1 cut(s) 454
PkrI GCNGC 6 cut(s) 286, 556, 559, 723, 726, 831
PleI GAGTC 1 cut(s) 25
PpsI GAGTC 1 cut(s) 25
PpuMI RGGWCCY 1 cut(s) 930
Psp124BI GAGCTC 1 cut(s) 138
Psp1406I AACGTT 1 cut(s) 444
Psp5II RGGWCCY 1 cut(s) 930
Psp6I CCWGG 1 cut(s) 627
PspFI CCCAGC 1 cut(s) 877
PspGI CCWGG 1 cut(s) 627
PspN4I GGNNCC 3 cut(s) 459, 484, 931
PspPI GGNCC 2 cut(s) 94, 930
PspPPI RGGWCCY 1 cut(s) 930
PstNI CAGNNNCTG 1 cut(s) 949
PsuI RGATCY 1 cut(s) 946
SacI GAGCTC 1 cut(s) 138
SaqAI TTAA 2 cut(s) 156, 973
SatI GCNGC 6 cut(s) 285, 555, 558, 722, 725, 830
Sau3AI GATC 6 cut(s) 34, 369, 631, 712, 868, 946
Sau96I GGNCC 2 cut(s) 94, 930
SchI GAGTC 1 cut(s) 26
ScrFI CCNGG 2 cut(s) 101, 629
SduI GDGCHC 1 cut(s) 138
SfuI TTCGAA 2 cut(s) 258, 838
SinI GGWCC 2 cut(s) 94, 930
SmlI CTYRAG 1 cut(s) 89
SmoI CTYRAG 1 cut(s) 89
SpeI ACTAGT 1 cut(s) 185
Sse9I AATT 8 cut(s) 153, 171, 449, 517, 608, 681, 735, 889
SsiI CCGC 4 cut(s) 382, 557, 721, 725
SspMI CTAG 3 cut(s) 186, 390, 671
SstI GAGCTC 1 cut(s) 138
StyD4I CCNGG 2 cut(s) 99, 627
StyI CCWWGG 1 cut(s) 490
TaiI ACGT 3 cut(s) 124, 447, 751
TaqI TCGA 3 cut(s) 72, 258, 838
TasI AATT 8 cut(s) 153, 171, 449, 517, 608, 681, 735, 889
TauI GCSGC 3 cut(s) 560, 724, 727
TfiI GAWTC 2 cut(s) 538, 809
Tru1I TTAA 2 cut(s) 156, 973
Tru9I TTAA 2 cut(s) 156, 973
TscAI CASTG 1 cut(s) 484
TseI GCWGC 3 cut(s) 284, 554, 829
TspDTI ATGAA 1 cut(s) 554
TspRI CASTG 1 cut(s) 484
VpaK11BI GGWCC 2 cut(s) 94, 930
XagI CCTNNNNNAGG 1 cut(s) 937
XapI RAATTY 1 cut(s) 517
XceI RCATGY 1 cut(s) 836
XmiI GTMKAC 1 cut(s) 900
XmnI GAANNNNTTC 1 cut(s) 542
XspI CTAG 3 cut(s) 186, 390, 671
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.