Rw0G006640

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00245
OG0000064
Physical Location & Seq
Reverse (-)
254835 .. 255957
1123 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G006640.1

Sequence Viewer

Length: 1080 bp
ATGACCAGACGAAATAAATTGAATAAATACGCTGCAGCAACCTTTAGTAGCTACTTATCAGCATGGCCTGATCTTCTCTTTTTGATTCTGGACAAGTTGTTGGAACCCATTGACCATGTTCGCTGTGCTCTCGTCTGCAAGGAATGGCATTCCCTTGCAAAAGAATATAACCTTACAACGCAGCGCTGGCACAGGGTACTTCCAATGCTCATGATATCTGCCGGATCCTCAAAAACGCTGTACAGTGTTTCCGAAGGAAAAAACTACATAAAAAATGTTCAGCTTCCGTACAAACGTAATAGGTTTTGTGGCTCTAGCCATGGTTGGTTGGCCATAGTAGACAAAACTAGTCGTGACATAACTCTCGTGAACCCTTTTGCACAAGCAGTGGCGCCCATTCATCTCCCTCATTTGAACGAGGACGTCTCAAAGGTCATCCTATCCGCTGATCCTGCTTTGAATCCGAATAGTTTATATGGAGGGCAGGAAGATTGGAATTGCATCAGACTAGACTCACTACATCACCATCTTACTGATGTTCTATTTTATAAAAGCCAAATCTACGCGGTATCAGTTCATGGAACGATTGTGTCAATCAATGTTAACAAGTGTGTTATCAACTCTTCACATCCTCGACCTCCAGAATTACTGGATGTTCGGGTATTCATGACTCGCATTAGAGATTTGGATCAGGCCTATCTTGTGGAATCAACCAAGGGACACCTATGGCACGTACAAAGATGTTTAATAGGAGTCACGCAATTTGACGGCAATGTACTTTTCGAAGAGGGATTCAGGGTATACAAGGTGGTGTTCAGCGATACAGATGGTTGCATGGTGAAGCATGTTGAGGTAAAAACCATAGGAGATGAGGCTTTGTTCCTTGGCAAAAATTATTCAGTCTCTGTTTCGGCTTCAAAGTTTCCTGGGTGCCAGCCAAATTCCATATACTACACAGGAGATTCGAAAGAATTTGTTATGAGAATTTTCGATGTAGAGTTCGGAACCGCTTGTGCAGTTATAGACGGTGAAAAGCCACGCGCACTTTGGATTACGCCACCGTTTACGGGCCTCGGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295 F-box F-box-like

Protein Analysis

359

Amino Acids

40.55

Weight (kDa)

8.29

Isoelectric Point (pI)

34.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 23 - 55 9.6e-07 F-box-like
Beta-prop_KIB1-4 PF03478 80 - 330 4.6e-40 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000064)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04090 FvH4_1g04091 FvH4_1g04110 FvH4_1g04440 FvH4_1g05330 FvH4_1g05332 FvH4_1g05560 FvH4_1g05580 FvH4_1g05590 FvH4_1g05611 FvH4_1g05892 FvH4_1g05900 FvH4_1g06763 FvH4_1g17860 FvH4_1g17860 FvH4_1g17861 FvH4_1g17880 FvH4_1g17902 FvH4_2g08142 FvH4_2g25110 FvH4_2g34380 FvH4_3g19131 FvH4_3g20501 FvH4_4g02770 FvH4_4g02771 FvH4_4g17610 FvH4_4g26951 FvH4_4g28330 FvH4_4g29110 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29690 FvH4_4g29691 FvH4_4g30221 FvH4_4g30230 FvH4_4g30240 FvH4_4g30602 FvH4_4g30610 FvH4_6g01351 FvH4_6g01780 FvH4_6g01890 FvH4_6g47150 FvH4_6g52260 FvH4_6g52703 FvH4_7g23210 FvH4_7g23240 FvH4_7g23350 FvH4_7g28790 FvH4_7g28820 FvH4_7g28830 FvH4_7g28840 FvH4_7g28890 FvH4_7g29040 FvH4_7g29050 FvH4_7g29990 FvH4_7g33871 FvH4_c6g00090
malus_domestica MD01G1180800.v1.1 MD01G1199400.v1.1 MD02G1310000.v1.1 MD04G1097400.v1.1 MD07G1264800.v1.1 MD07G1264900.v1.1 MD07G1270200.v1.1 MD07G1270300.v1.1 MD07G1270500.v1.1 MD10G1043600.v1.1 MD13G1047500.v1.1 MD13G1075200.v1.1
prunus_persica Prupe.1G009400_v2.0.a1 Prupe.1G076100_v2.0.a1 Prupe.1G158300_v2.0.a1 Prupe.1G208900_v2.0.a1 Prupe.1G273900_v2.0.a1 Prupe.2G253900_v2.0.a1 Prupe.2G255700_v2.0.a1 Prupe.2G256000_v2.0.a1 Prupe.2G280300_v2.0.a1 Prupe.2G290700_v2.0.a1 Prupe.3G068500_v2.0.a1 Prupe.4G112800_v2.0.a1 Prupe.5G168600_v2.0.a1 Prupe.5G168800_v2.0.a1 Prupe.5G169100_v2.0.a1 Prupe.8G049800_v2.0.a1
pyrus_communis pycom01g19330 pycom01g20930 pycom01g22010 pycom01g22020 pycom02g26090 pycom07g24330 pycom07g24720 pycom13g04150 pycom420g01320
rosa_chinensis RchiOBHm_Chr1g0324121 RchiOBHm_Chr1g0324251 RchiOBHm_Chr1g0343741 RchiOBHm_Chr1g0355031 RchiOBHm_Chr1g0359461 RchiOBHm_Chr1g0376351 RchiOBHm_Chr1g0376381 RchiOBHm_Chr2g0092531 RchiOBHm_Chr2g0108311 RchiOBHm_Chr2g0108321 RchiOBHm_Chr2g0108331 RchiOBHm_Chr2g0133991 RchiOBHm_Chr2g0156691 RchiOBHm_Chr2g0173801 RchiOBHm_Chr3g0449701 RchiOBHm_Chr3g0449861 RchiOBHm_Chr4g0417201 RchiOBHm_Chr4g0417931 RchiOBHm_Chr4g0424551 RchiOBHm_Chr4g0442921 RchiOBHm_Chr4g0442931 RchiOBHm_Chr5g0032171 RchiOBHm_Chr5g0032191 RchiOBHm_Chr5g0032221 RchiOBHm_Chr6g0258051 RchiOBHm_Chr6g0277851 RchiOBHm_Chr6g0291671 RchiOBHm_Chr6g0291691 RchiOBHm_Chr6g0312761 RchiOBHm_Chr7g0223801 RchiOBHm_Chr7g0224141
rosa_laevigata RLG00000001917 RLG00000001951 RLG00000005804 RLG00000006309 RLG00000006344 RLG00000006458 RLG00000016168 RLG00000016259 RLG00000016305 RLG00000016306 RLG00000019810 RLG00000022223 RLG00000026077 RLG00000026607 RLG00000029703 RLG00000033364 RLG00000034633 RLG00000034637
rosa_multiflora Rmu_co8010764.1_g000001 Rmu_co8262143.1_g000001 Rmu_co8346175.1_g000001 Rmu_sc0000096.1_g000016 Rmu_sc0000544.1_g000003 Rmu_sc0000591.1_g000007 Rmu_sc0000756.1_g000029 Rmu_sc0000841.1_g000017 Rmu_sc0000907.1_g000020 Rmu_sc0000954.1_g000004 Rmu_sc0001195.1_g000007 Rmu_sc0001198.1_g000008 Rmu_sc0001201.1_g000011 Rmu_sc0001201.1_g000013 Rmu_sc0001782.1_g000035 Rmu_sc0001904.1_g000004 Rmu_sc0001962.1_g000039 Rmu_sc0002113.1_g000021 Rmu_sc0002226.1_g000017 Rmu_sc0002226.1_g000020 Rmu_sc0002327.1_g000005 Rmu_sc0002372.1_g000010 Rmu_sc0002372.1_g000014 Rmu_sc0002687.1_g000005 Rmu_sc0003031.1_g000019 Rmu_sc0003076.1_g000014 Rmu_sc0004296.1_g000009 Rmu_sc0004540.1_g000009 Rmu_sc0005369.1_g000002 Rmu_sc0005375.1_g000003 Rmu_sc0005375.1_g000013 Rmu_sc0005742.1_g000008 Rmu_sc0005742.1_g000015 Rmu_sc0005742.1_g000021 Rmu_sc0007419.1_g000011 Rmu_sc0008909.1_g000008 Rmu_sc0010556.1_g000018 Rmu_sc0010999.1_g000008 Rmu_sc0017510.1_g000003 Rmu_sc0017556.1_g000001 Rmu_sc0017900.1_g000007 Rmu_sc0024249.1_g000001 Rmu_sc0032377.1_g000001 Rmu_sc0033569.1_g000001 Rmu_sc0036457.1_g000001 Rmu_sc0041304.1_g000001 Rmu_ssc0000204.1_g000011 Rmu_ssc0000438.1_g000056
rosa_roxburghii Rroxscaffold_1G00048250 Rroxscaffold_1G00048290 Rroxscaffold_2G00092800 Rroxscaffold_2G00110580 Rroxscaffold_2G00135240 Rroxscaffold_2G00135260 Rroxscaffold_2G00135300 Rroxscaffold_2G00149010 Rroxscaffold_2G00149160 Rroxscaffold_2G00149170 Rroxscaffold_2G00149630 Rroxscaffold_2G00151760 Rroxscaffold_2G00151790 Rroxscaffold_2G00152170 Rroxscaffold_3G00225510 Rroxscaffold_3G00249210 Rroxscaffold_4G00277020 Rroxscaffold_4G00281760 Rroxscaffold_4G00281770 Rroxscaffold_4G00281810 Rroxscaffold_4G00281820 Rroxscaffold_4G00282160 Rroxscaffold_4G00310340 Rroxscaffold_5G00361040 Rroxscaffold_5G00363770 Rroxscaffold_5G00366460 Rroxscaffold_5G00378270 Rroxscaffold_5G00378310 Rroxscaffold_5G00379550 Rroxscaffold_5G00379650 Rroxscaffold_6G00422110 Rroxscaffold_6G00427680 Rroxscaffold_7G00175850 Rroxscaffold_7G00175860 Rroxscaffold_7G00190720 Rroxscaffold_7G00190750 Rroxscaffold_7G00190830 Rroxscaffold_7G00196820
rosa_rugosa Rorug01G0395900 Rorug01G0444400 Rorug01G0488100 Rorug02G0001700 Rorug02G0021600 Rorug02G0025700 Rorug02G0152200 Rorug02G0271300 Rorug02G0455800 Rorug02G0572800 Rorug02G0576000 Rorug04G0146300 Rorug04G0172200 Rorug04G0172400 Rorug04G0311300 Rorug04G0312200 Rorug04G0312300 Rorug05G0129500 Rorug05G0129700 Rorug05G0250600 Rorug06G0112600 Rorug06G0220700 Rorug06G0220800 Rorug07G0114600
rosa_samantha Rh1DG066700 Rh1DG081800 Rh1DG184300 Rh1DG401900 Rh1DG402700 Rh1DG407000 Rh1DG407600 Rh2AG200800 Rh2AG201000 Rh2AG521000 Rh2BG066200 Rh2BG066300 Rh2BG073900 Rh2BG373500 Rh2BG417600 Rh2BG662600 Rh2DG066200 Rh2DG072000 Rh2DG390000 Rh2DG677700 Rh3CG020200 Rh3CG021500 Rh3CG081200 Rh4AG209600 Rh4AG362600 Rh4AG362700 Rh4AG397200 Rh4BG209800 Rh4BG209900 Rh4BG210000 Rh4CG220800 Rh4CG271300 Rh4CG388000 Rh4DG029800 Rh4DG368700 Rh4DG403900 Rh5AG035900 Rh5BG034600 Rh5BG034900 Rh5DG228700 Rh5DG228800 Rh6AG355900 Rh6CG083600 Rh6CG229000 Rh6CG229100 Rh6CG229700 Rh6CG346500 Rh6CG346600 Rh7AG362300 Rh7AG362400 Rh7AG363200 Rh7AG365100 Rh7CG380900 Rh7CG381000 Rh7CG381600 Rh7DG437600
rosa_wichuraiana Rw0G004580 Rw0G004590 Rw0G005750 Rw0G006640 Rw0G007050 Rw0G008040 Rw0G012200 Rw0G013750 Rw0G016590 Rw1G006090 Rw1G012040 Rw1G036130 Rw1G036270 Rw1G036290 Rw1G036420 Rw1G036430 Rw1G036590 Rw2G003560 Rw2G005130 Rw2G005980 Rw2G006090 Rw2G015980 Rw2G016000 Rw2G043010 Rw2G053520 Rw4G018760 Rw4G022000 Rw4G034250 Rw5G003280 Rw5G020380 Rw5G020390 Rw6G008210 Rw6G031000 Rw7G030830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 549
AatII GACGTC 1 cut(s) 426
AccB1I GGYRCC 2 cut(s) 391, 930
AccI GTMKAC 2 cut(s) 339, 801
AccII CGCG 2 cut(s) 566, 1041
AciI CCGC 3 cut(s) 444, 566, 1008
AclWI GGATC 4 cut(s) 219, 232, 443, 696
AcoI YGGCCR 1 cut(s) 330
AcsI RAATTY 3 cut(s) 940, 971, 984
AcyI GRCGYC 2 cut(s) 392, 423
AfaI GTAC 5 cut(s) 198, 242, 290, 735, 777
AfeI AGCGCT 1 cut(s) 185
AfiI CCNNNNNNNGG 1 cut(s) 1067
AgsI TTSAA 4 cut(s) 22, 415, 460, 918
AhlI ACTAGT 1 cut(s) 347
AjnI CCWGG 1 cut(s) 925
AluBI AGCT 2 cut(s) 51, 283
AluI AGCT 2 cut(s) 51, 283
Alw21I GWGCWC 1 cut(s) 130
Alw26I GTCTC 2 cut(s) 430, 907
AlwI GGATC 4 cut(s) 219, 232, 443, 696
AlwNI CAGNNNCTG 1 cut(s) 905
Aor51HI AGCGCT 1 cut(s) 185
AoxI GGCC 4 cut(s) 65, 330, 693, 1069
ApeKI GCWGC 3 cut(s) 32, 35, 181
ApoI RAATTY 3 cut(s) 940, 971, 984
AspLEI GCGC 3 cut(s) 186, 394, 1043
AspS9I GGNCC 1 cut(s) 1069
AsuHPI GGTGA 3 cut(s) 515, 850, 1040
AsuII TTCGAA 2 cut(s) 783, 965
BalI TGGCCA 1 cut(s) 332
BamHI GGATCC 1 cut(s) 224
BanI GGYRCC 2 cut(s) 391, 930
BauI CACGAG 1 cut(s) 365
Bbv12I GWGCWC 1 cut(s) 130
BbvI GCAGC 3 cut(s) 19, 47, 193
BccI CCATC 2 cut(s) 534, 821
BceAI ACGGC 1 cut(s) 784
BciT130I CCWGG 1 cut(s) 927
BcoDI GTCTC 2 cut(s) 430, 907
BcuI ACTAGT 1 cut(s) 347
BfaI CTAG 4 cut(s) 315, 348, 509, 1078
BfmI CTRYAG 1 cut(s) 33
BfoI RGCGCY 2 cut(s) 187, 395
BisI GCNGC 3 cut(s) 33, 36, 182
BlsI GCNGC 3 cut(s) 34, 37, 183
Bme1390I CCNGG 1 cut(s) 927
BmgT120I GGNCC 1 cut(s) 1069
BmiI GGNNCC 5 cut(s) 105, 226, 393, 932, 1006
BmrFI CCNGG 1 cut(s) 927
BmsI GCATC 1 cut(s) 510
BplI GAGNNNNNCTC 2 cut(s) 410, 442
BpmI CTGGAG 1 cut(s) 624
Bpu14I TTCGAA 2 cut(s) 783, 965
BsaAI YACGTR 1 cut(s) 733
BsaBI GATNNNNATC 1 cut(s) 687
BsaHI GRCGYC 2 cut(s) 392, 423
BsaJI CCNNGG 5 cut(s) 319, 714, 883, 926, 1072
Bsc4I CCNNNNNNNGG 1 cut(s) 1067
Bse1I ACTGG 1 cut(s) 654
Bse3DI GCAATG 1 cut(s) 778
Bse8I GATNNNNATC 1 cut(s) 687
BseBI CCWGG 1 cut(s) 927
BseDI CCNNGG 5 cut(s) 319, 714, 883, 926, 1072
BseGI GGATG 3 cut(s) 435, 628, 658
BseJI GATNNNNATC 1 cut(s) 687
BseLI CCNNNNNNNGG 1 cut(s) 1067
BseMI GCAATG 1 cut(s) 778
BseNI ACTGG 1 cut(s) 654
BseXI GCAGC 3 cut(s) 19, 47, 193
BsgI GTGCAG 1 cut(s) 1035
Bsh1236I CGCG 2 cut(s) 566, 1041
BshFI GGCC 4 cut(s) 67, 332, 695, 1071
BshNI GGYRCC 2 cut(s) 391, 930
BsiHKAI GWGCWC 1 cut(s) 130
BsiSI CCGG 1 cut(s) 222
BslFI GGGAC 1 cut(s) 732
BslI CCNNNNNNNGG 1 cut(s) 1067
BsmAI GTCTC 2 cut(s) 430, 907
BsmBI CGTCTC 1 cut(s) 430
BsmFI GGGAC 1 cut(s) 732
BsmI GAATGC 1 cut(s) 148
BsnI GGCC 4 cut(s) 67, 332, 695, 1071
Bsp119I TTCGAA 2 cut(s) 783, 965
Bsp1286I GDGCHC 1 cut(s) 130
Bsp1407I TGTACA 1 cut(s) 240
Bsp143I GATC 4 cut(s) 70, 224, 448, 688
Bsp19I CCATGG 1 cut(s) 319
BspACI CCGC 3 cut(s) 444, 566, 1008
BspANI GGCC 4 cut(s) 67, 332, 695, 1071
BspFNI CGCG 2 cut(s) 566, 1041
BspHI TCATGA 2 cut(s) 210, 666
BspLI GGNNCC 5 cut(s) 105, 226, 393, 932, 1006
BspMAI CTGCAG 1 cut(s) 37
BspPI GGATC 4 cut(s) 219, 232, 443, 696
BspT104I TTCGAA 2 cut(s) 783, 965
BspT107I GGYRCC 2 cut(s) 391, 930
BsrDI GCAATG 1 cut(s) 778
BsrGI TGTACA 1 cut(s) 240
BsrI ACTGG 1 cut(s) 654
BssECI CCNNGG 5 cut(s) 319, 714, 883, 926, 1072
BssMI GATC 4 cut(s) 70, 224, 448, 688
BssNAI GTATAC 1 cut(s) 802
BssNI GRCGYC 2 cut(s) 392, 423
BssSI CACGAG 1 cut(s) 365
BssT1I CCWWGG 3 cut(s) 319, 714, 883
Bst1107I GTATAC 1 cut(s) 802
Bst2BI CACGAG 1 cut(s) 365
Bst2UI CCWGG 1 cut(s) 927
Bst4CI ACNGT 3 cut(s) 245, 1028, 1062
Bst6I CTCTTC 2 cut(s) 628, 780
BstACI GRCGYC 2 cut(s) 392, 423
BstAUI TGTACA 1 cut(s) 240
BstBAI YACGTR 1 cut(s) 733
BstBI TTCGAA 2 cut(s) 783, 965
BstC8I GCNNGC 2 cut(s) 188, 935
BstDSI CCRYGG 1 cut(s) 319
BstF5I GGATG 3 cut(s) 435, 628, 658
BstFNI CGCG 2 cut(s) 566, 1041
BstH2I RGCGCY 2 cut(s) 187, 395
BstHHI GCGC 3 cut(s) 186, 394, 1043
BstKTI GATC 4 cut(s) 73, 227, 451, 691
BstMAI GTCTC 2 cut(s) 430, 907
BstMBI GATC 4 cut(s) 70, 224, 448, 688
BstMWI GCNNNNNNNGC 2 cut(s) 187, 452
BstNI CCWGG 1 cut(s) 927
BstNSI RCATGY 1 cut(s) 848
BstSCI CCNGG 1 cut(s) 925
BstSFI CTRYAG 1 cut(s) 33
BstUI CGCG 2 cut(s) 566, 1041
BstV1I GCAGC 3 cut(s) 19, 47, 193
BstX2I RGATCY 1 cut(s) 224
BstYI RGATCY 1 cut(s) 224
BstZ17I GTATAC 1 cut(s) 802
BsuRI GGCC 4 cut(s) 67, 332, 695, 1071
BtgI CCRYGG 1 cut(s) 319
BtsCI GGATG 3 cut(s) 435, 628, 658
BtsI GCAGTG 1 cut(s) 393
BtsIMutI CAGTG 2 cut(s) 250, 393
Cac8I GCNNGC 2 cut(s) 188, 935
CaiI CAGNNNCTG 1 cut(s) 905
CciI TCATGA 2 cut(s) 210, 666
CfoI GCGC 3 cut(s) 186, 394, 1043
Cfr13I GGNCC 1 cut(s) 1069
Csp6I GTAC 5 cut(s) 197, 241, 289, 734, 776
CviAII CATG 8 cut(s) 63, 116, 211, 320, 578, 667, 835, 845
CviQI GTAC 5 cut(s) 197, 241, 289, 734, 776
DinI GGCGCC 1 cut(s) 393
DpnI GATC 4 cut(s) 72, 226, 450, 690
DpnII GATC 4 cut(s) 70, 224, 448, 688
EaeI YGGCCR 1 cut(s) 330
Eam1104I CTCTTC 2 cut(s) 628, 780
EarI CTCTTC 2 cut(s) 628, 780
Eco130I CCWWGG 3 cut(s) 319, 714, 883
Eco147I AGGCCT 1 cut(s) 695
Eco32I GATATC 1 cut(s) 216
Eco47III AGCGCT 1 cut(s) 185
EcoRII CCWGG 1 cut(s) 925
EcoRV GATATC 1 cut(s) 216
EcoT14I CCWWGG 3 cut(s) 319, 714, 883
EgeI GGCGCC 1 cut(s) 393
EheI GGCGCC 1 cut(s) 393
ErhI CCWWGG 3 cut(s) 319, 714, 883
Esp3I CGTCTC 1 cut(s) 430
FaeI CATG 8 cut(s) 66, 119, 214, 323, 581, 670, 838, 848
FaqI GGGAC 1 cut(s) 732
FatI CATG 8 cut(s) 62, 115, 210, 319, 577, 666, 834, 844
FblI GTMKAC 2 cut(s) 339, 801
Fnu4HI GCNGC 3 cut(s) 33, 36, 182
FokI GGATG 3 cut(s) 422, 615, 665
Fsp4HI GCNGC 3 cut(s) 33, 36, 182
FspBI CTAG 4 cut(s) 315, 348, 509, 1078
GlaI GCGC 3 cut(s) 185, 393, 1042
GluI GCNGC 3 cut(s) 33, 36, 182
GsuI CTGGAG 1 cut(s) 624
HaeII RGCGCY 2 cut(s) 187, 395
HaeIII GGCC 4 cut(s) 67, 332, 695, 1071
HapII CCGG 1 cut(s) 222
HhaI GCGC 3 cut(s) 186, 394, 1043
Hin1I GRCGYC 2 cut(s) 392, 423
Hin1II CATG 8 cut(s) 66, 119, 214, 323, 581, 670, 838, 848
Hin6I GCGC 3 cut(s) 184, 392, 1041
HinP1I GCGC 3 cut(s) 184, 392, 1041
HincII GTYRAC 1 cut(s) 604
HindII GTYRAC 1 cut(s) 604
HinfI GANTC 8 cut(s) 85, 460, 512, 670, 707, 753, 792, 962
HpaI GTTAAC 1 cut(s) 604
HpaII CCGG 1 cut(s) 222
HphI GGTGA 3 cut(s) 515, 850, 1040
Hpy166II GTNNAC 5 cut(s) 340, 370, 604, 802, 1065
Hpy188I TCNGA 4 cut(s) 253, 465, 506, 1004
Hpy188III TCNNGA 6 cut(s) 89, 211, 353, 367, 641, 667
Hpy8I GTNNAC 5 cut(s) 340, 370, 604, 802, 1065
HpyAV CCTTC 1 cut(s) 248
HpyCH4III ACNGT 3 cut(s) 245, 1028, 1062
HpyCH4IV ACGT 3 cut(s) 295, 423, 732
HpyCH4V TGCA 7 cut(s) 35, 138, 158, 380, 501, 834, 1016
HpyF10VI GCNNNNNNNGC 2 cut(s) 187, 452
HpySE526I ACGT 3 cut(s) 295, 423, 732
Hsp92I GRCGYC 2 cut(s) 392, 423
Hsp92II CATG 8 cut(s) 66, 119, 214, 323, 581, 670, 838, 848
HspAI GCGC 3 cut(s) 184, 392, 1041
KasI GGCGCC 1 cut(s) 391
KspAI GTTAAC 1 cut(s) 604
Kzo9I GATC 4 cut(s) 70, 224, 448, 688
Lsp1109I GCAGC 3 cut(s) 19, 47, 193
LweI GCATC 1 cut(s) 510
MaeI CTAG 4 cut(s) 315, 348, 509, 1078
MaeII ACGT 3 cut(s) 295, 423, 732
MaeIII GTNAC 2 cut(s) 353, 754
MalI GATC 4 cut(s) 72, 226, 450, 690
MboI GATC 4 cut(s) 70, 224, 448, 688
MboII GAAGA 4 cut(s) 65, 500, 615, 797
MflI RGATCY 1 cut(s) 224
MhlI GDGCHC 1 cut(s) 130
MlsI TGGCCA 1 cut(s) 332
MluCI AATT 8 cut(s) 17, 496, 644, 761, 892, 940, 971, 984
MluNI TGGCCA 1 cut(s) 332
Mly113I GGCGCC 1 cut(s) 392
MlyI GAGTC 3 cut(s) 506, 664, 762
MmeI TCCRAC 1 cut(s) 81
MnlI CCTC 9 cut(s) 238, 412, 417, 473, 642, 648, 781, 844, 865
Mox20I TGGCCA 1 cut(s) 332
MscI TGGCCA 1 cut(s) 332
MseI TTAA 2 cut(s) 603, 746
Msp20I TGGCCA 1 cut(s) 332
MspA1I CMGCKG 1 cut(s) 446
MspI CCGG 1 cut(s) 222
MspR9I CCNGG 1 cut(s) 927
Mva1269I GAATGC 1 cut(s) 148
MvaI CCWGG 1 cut(s) 927
MvnI CGCG 2 cut(s) 566, 1041
MwoI GCNNNNNNNGC 2 cut(s) 187, 452
NarI GGCGCC 1 cut(s) 392
NcoI CCATGG 1 cut(s) 319
NdeII GATC 4 cut(s) 70, 224, 448, 688
NlaIII CATG 8 cut(s) 66, 119, 214, 323, 581, 670, 838, 848
NlaIV GGNNCC 5 cut(s) 105, 226, 393, 932, 1006
NmeAIII GCCGAG 1 cut(s) 1053
NmuCI GTSAC 2 cut(s) 353, 754
NspI RCATGY 1 cut(s) 848
NspV TTCGAA 2 cut(s) 783, 965
PagI TCATGA 2 cut(s) 210, 666
PceI AGGCCT 1 cut(s) 695
PctI GAATGC 1 cut(s) 148
PfeI GAWTC 5 cut(s) 85, 460, 707, 792, 962
PkrI GCNGC 3 cut(s) 34, 37, 183
PleI GAGTC 3 cut(s) 506, 664, 761
PluTI GGCGCC 1 cut(s) 395
PpsI GAGTC 3 cut(s) 506, 664, 761
Ppu21I YACGTR 1 cut(s) 733
PsiI TTATAA 1 cut(s) 549
Psp6I CCWGG 1 cut(s) 925
PspGI CCWGG 1 cut(s) 925
PspN4I GGNNCC 5 cut(s) 105, 226, 393, 932, 1006
PspPI GGNCC 1 cut(s) 1069
PstI CTGCAG 1 cut(s) 37
PstNI CAGNNNCTG 1 cut(s) 905
PsuI RGATCY 1 cut(s) 224
RsaI GTAC 5 cut(s) 198, 242, 290, 735, 777
RsaNI GTAC 5 cut(s) 197, 241, 289, 734, 776
SaqAI TTAA 2 cut(s) 603, 746
SatI GCNGC 3 cut(s) 33, 36, 182
Sau3AI GATC 4 cut(s) 70, 224, 448, 688
Sau96I GGNCC 1 cut(s) 1069
SchI GAGTC 3 cut(s) 506, 664, 762
ScrFI CCNGG 1 cut(s) 927
SduI GDGCHC 1 cut(s) 130
SfaNI GCATC 1 cut(s) 510
SfcI CTRYAG 1 cut(s) 33
SfoI GGCGCC 1 cut(s) 393
SfuI TTCGAA 2 cut(s) 783, 965
SpeI ACTAGT 1 cut(s) 347
Sse9I AATT 8 cut(s) 17, 496, 644, 761, 892, 940, 971, 984
SseBI AGGCCT 1 cut(s) 695
SsiI CCGC 3 cut(s) 444, 566, 1008
SspDI GGCGCC 1 cut(s) 391
SspMI CTAG 4 cut(s) 315, 348, 509, 1078
StuI AGGCCT 1 cut(s) 695
StyD4I CCNGG 1 cut(s) 925
StyI CCWWGG 3 cut(s) 319, 714, 883
TaaI ACNGT 3 cut(s) 245, 1028, 1062
TaiI ACGT 3 cut(s) 298, 426, 735
TaqI TCGA 4 cut(s) 634, 783, 965, 990
TasI AATT 8 cut(s) 17, 496, 644, 761, 892, 940, 971, 984
TatI WGTACW 2 cut(s) 240, 775
TfiI GAWTC 5 cut(s) 85, 460, 707, 792, 962
Tru1I TTAA 2 cut(s) 603, 746
Tru9I TTAA 2 cut(s) 603, 746
TscAI CASTG 2 cut(s) 250, 393
TseFI GTSAC 2 cut(s) 353, 754
TseI GCWGC 3 cut(s) 32, 35, 181
Tsp45I GTSAC 2 cut(s) 353, 754
TspDTI ATGAA 3 cut(s) 389, 566, 655
TspGWI ACGGA 1 cut(s) 276
TspRI CASTG 2 cut(s) 250, 393
XapI RAATTY 3 cut(s) 940, 971, 984
XceI RCATGY 1 cut(s) 848
XcmI CCANNNNNNNNNTGG 1 cut(s) 1044
XmiI GTMKAC 2 cut(s) 339, 801
XspI CTAG 4 cut(s) 315, 348, 509, 1078
ZraI GACGTC 1 cut(s) 424
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.