FvH4_1g05330

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000064
Physical Location & Seq
Reverse (-)
2824760 .. 2825927
1168 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g05330.t1

Sequence Viewer

Length: 1143 bp
ATGAAGCGACCCAAGACTCACGGCGGATGTAAATCTGTATGTTCTGATGGTTCTGAATGGGAAACTCTTCTTACAGAAGTTGCGTTTCCTGTGTTGGAAAAGCTGCTGGAACCCCTTGATCATGTTCGTTTCGCTACCGTGTGTAAACGATGGAGTTCAATTGAAAAAGATTACAATCACACAACTCAGCGTTGGCGCAGTAAGCAAGTACTTCCCATGCTCATGATCCCTCCTAGTAGTGCTGCACTATCCCAAGGAGTAGTACTGTACAGCGTTTCTGAAAGAAGACTGTATAACAACATTGTGTTACCGGTGCCTGCAAATGAAAAGTATTGTGGCTTTAGCCATGGTTGGTTGGCCTCCATAGACGAATCTCTGACCAACATAACTCTTAGAAAGTTCCCCGCATACCGGAACGGCGGACGGAATGTCATTCATCTTCCTCCTCTCAAACATGACGACTTCACATATAATTACAACACGAAATCCCTCACAAAGGTCATATTGTCTGCTGATCCCACTTTACATCCCAACAATTATACAGTCTCGGCAATCTTCGATCATAGTCACAAGGTAGCTTACCTTGCAGGACAACGAGATCATTGGATGTACCCCTTTTTAATTGGTAGCTTTCCCAAGTTTGGTCACGCTATATTTTATAGAGACGATGGCTACCTAATCAATTACTTCGGAAGTACTTTGTTGAGATTCGATGTATATTTTAGTTTATTGCAGACTCGACCTAAAATCAGTCCTAAAGGTTGTACATATTTTGTTGAAACAACCAAAGGAAACTTATTGCTTGTTGAAAAAGTTTCGGCACGTCAGGAAGTGTCTGCTGCAACGTTCAAGGTTTACCAATTGGGAACTGATCGCTCGCTTGATACACAAGTACTCGAGGTAAATAGCATTGGAGATGAAGCTCTATTCGTATGTGAGAGTAATTCAATGTCTGTTTTGGCTTCGAACTTTCGTGGATGCCAGCCTAATTCTATCTACTATGCTTATAATCGTGGCTCAACATGGGAGATGGGTATCTTCAGTTTAGAGAACAAAACCACCACACGACTTTACTCTCTGAATCATTGTGAATCGGACTATATGCCATTTTGGATCACACCATCGTTTGAAGGACTCTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295 F-box F-box-like

Protein Analysis

381

Amino Acids

43.33

Weight (kDa)

8.45

Isoelectric Point (pI)

43.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_KIB1-4 PF03478 89 - 347 9.9e-33 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000064)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04090 FvH4_1g04091 FvH4_1g04110 FvH4_1g04440 FvH4_1g05330 FvH4_1g05332 FvH4_1g05560 FvH4_1g05580 FvH4_1g05590 FvH4_1g05611 FvH4_1g05892 FvH4_1g05900 FvH4_1g06763 FvH4_1g17860 FvH4_1g17860 FvH4_1g17861 FvH4_1g17880 FvH4_1g17902 FvH4_2g08142 FvH4_2g25110 FvH4_2g34380 FvH4_3g19131 FvH4_3g20501 FvH4_4g02770 FvH4_4g02771 FvH4_4g17610 FvH4_4g26951 FvH4_4g28330 FvH4_4g29110 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29690 FvH4_4g29691 FvH4_4g30221 FvH4_4g30230 FvH4_4g30240 FvH4_4g30602 FvH4_4g30610 FvH4_6g01351 FvH4_6g01780 FvH4_6g01890 FvH4_6g47150 FvH4_6g52260 FvH4_6g52703 FvH4_7g23210 FvH4_7g23240 FvH4_7g23350 FvH4_7g28790 FvH4_7g28820 FvH4_7g28830 FvH4_7g28840 FvH4_7g28890 FvH4_7g29040 FvH4_7g29050 FvH4_7g29990 FvH4_7g33871 FvH4_c6g00090
malus_domestica MD01G1180800.v1.1 MD01G1199400.v1.1 MD02G1310000.v1.1 MD04G1097400.v1.1 MD07G1264800.v1.1 MD07G1264900.v1.1 MD07G1270200.v1.1 MD07G1270300.v1.1 MD07G1270500.v1.1 MD10G1043600.v1.1 MD13G1047500.v1.1 MD13G1075200.v1.1
prunus_persica Prupe.1G009400_v2.0.a1 Prupe.1G076100_v2.0.a1 Prupe.1G158300_v2.0.a1 Prupe.1G208900_v2.0.a1 Prupe.1G273900_v2.0.a1 Prupe.2G253900_v2.0.a1 Prupe.2G255700_v2.0.a1 Prupe.2G256000_v2.0.a1 Prupe.2G280300_v2.0.a1 Prupe.2G290700_v2.0.a1 Prupe.3G068500_v2.0.a1 Prupe.4G112800_v2.0.a1 Prupe.5G168600_v2.0.a1 Prupe.5G168800_v2.0.a1 Prupe.5G169100_v2.0.a1 Prupe.8G049800_v2.0.a1
pyrus_communis pycom01g19330 pycom01g20930 pycom01g22010 pycom01g22020 pycom02g26090 pycom07g24330 pycom07g24720 pycom13g04150 pycom420g01320
rosa_chinensis RchiOBHm_Chr1g0324121 RchiOBHm_Chr1g0324251 RchiOBHm_Chr1g0343741 RchiOBHm_Chr1g0355031 RchiOBHm_Chr1g0359461 RchiOBHm_Chr1g0376351 RchiOBHm_Chr1g0376381 RchiOBHm_Chr2g0092531 RchiOBHm_Chr2g0108311 RchiOBHm_Chr2g0108321 RchiOBHm_Chr2g0108331 RchiOBHm_Chr2g0133991 RchiOBHm_Chr2g0156691 RchiOBHm_Chr2g0173801 RchiOBHm_Chr3g0449701 RchiOBHm_Chr3g0449861 RchiOBHm_Chr4g0417201 RchiOBHm_Chr4g0417931 RchiOBHm_Chr4g0424551 RchiOBHm_Chr4g0442921 RchiOBHm_Chr4g0442931 RchiOBHm_Chr5g0032171 RchiOBHm_Chr5g0032191 RchiOBHm_Chr5g0032221 RchiOBHm_Chr6g0258051 RchiOBHm_Chr6g0277851 RchiOBHm_Chr6g0291671 RchiOBHm_Chr6g0291691 RchiOBHm_Chr6g0312761 RchiOBHm_Chr7g0223801 RchiOBHm_Chr7g0224141
rosa_laevigata RLG00000001917 RLG00000001951 RLG00000005804 RLG00000006309 RLG00000006344 RLG00000006458 RLG00000016168 RLG00000016259 RLG00000016305 RLG00000016306 RLG00000019810 RLG00000022223 RLG00000026077 RLG00000026607 RLG00000029703 RLG00000033364 RLG00000034633 RLG00000034637
rosa_multiflora Rmu_co8010764.1_g000001 Rmu_co8262143.1_g000001 Rmu_co8346175.1_g000001 Rmu_sc0000096.1_g000016 Rmu_sc0000544.1_g000003 Rmu_sc0000591.1_g000007 Rmu_sc0000756.1_g000029 Rmu_sc0000841.1_g000017 Rmu_sc0000907.1_g000020 Rmu_sc0000954.1_g000004 Rmu_sc0001195.1_g000007 Rmu_sc0001198.1_g000008 Rmu_sc0001201.1_g000011 Rmu_sc0001201.1_g000013 Rmu_sc0001782.1_g000035 Rmu_sc0001904.1_g000004 Rmu_sc0001962.1_g000039 Rmu_sc0002113.1_g000021 Rmu_sc0002226.1_g000017 Rmu_sc0002226.1_g000020 Rmu_sc0002327.1_g000005 Rmu_sc0002372.1_g000010 Rmu_sc0002372.1_g000014 Rmu_sc0002687.1_g000005 Rmu_sc0003031.1_g000019 Rmu_sc0003076.1_g000014 Rmu_sc0004296.1_g000009 Rmu_sc0004540.1_g000009 Rmu_sc0005369.1_g000002 Rmu_sc0005375.1_g000003 Rmu_sc0005375.1_g000013 Rmu_sc0005742.1_g000008 Rmu_sc0005742.1_g000015 Rmu_sc0005742.1_g000021 Rmu_sc0007419.1_g000011 Rmu_sc0008909.1_g000008 Rmu_sc0010556.1_g000018 Rmu_sc0010999.1_g000008 Rmu_sc0017510.1_g000003 Rmu_sc0017556.1_g000001 Rmu_sc0017900.1_g000007 Rmu_sc0024249.1_g000001 Rmu_sc0032377.1_g000001 Rmu_sc0033569.1_g000001 Rmu_sc0036457.1_g000001 Rmu_sc0041304.1_g000001 Rmu_ssc0000204.1_g000011 Rmu_ssc0000438.1_g000056
rosa_roxburghii Rroxscaffold_1G00048250 Rroxscaffold_1G00048290 Rroxscaffold_2G00092800 Rroxscaffold_2G00110580 Rroxscaffold_2G00135240 Rroxscaffold_2G00135260 Rroxscaffold_2G00135300 Rroxscaffold_2G00149010 Rroxscaffold_2G00149160 Rroxscaffold_2G00149170 Rroxscaffold_2G00149630 Rroxscaffold_2G00151760 Rroxscaffold_2G00151790 Rroxscaffold_2G00152170 Rroxscaffold_3G00225510 Rroxscaffold_3G00249210 Rroxscaffold_4G00277020 Rroxscaffold_4G00281760 Rroxscaffold_4G00281770 Rroxscaffold_4G00281810 Rroxscaffold_4G00281820 Rroxscaffold_4G00282160 Rroxscaffold_4G00310340 Rroxscaffold_5G00361040 Rroxscaffold_5G00363770 Rroxscaffold_5G00366460 Rroxscaffold_5G00378270 Rroxscaffold_5G00378310 Rroxscaffold_5G00379550 Rroxscaffold_5G00379650 Rroxscaffold_6G00422110 Rroxscaffold_6G00427680 Rroxscaffold_7G00175850 Rroxscaffold_7G00175860 Rroxscaffold_7G00190720 Rroxscaffold_7G00190750 Rroxscaffold_7G00190830 Rroxscaffold_7G00196820
rosa_rugosa Rorug01G0395900 Rorug01G0444400 Rorug01G0488100 Rorug02G0001700 Rorug02G0021600 Rorug02G0025700 Rorug02G0152200 Rorug02G0271300 Rorug02G0455800 Rorug02G0572800 Rorug02G0576000 Rorug04G0146300 Rorug04G0172200 Rorug04G0172400 Rorug04G0311300 Rorug04G0312200 Rorug04G0312300 Rorug05G0129500 Rorug05G0129700 Rorug05G0250600 Rorug06G0112600 Rorug06G0220700 Rorug06G0220800 Rorug07G0114600
rosa_samantha Rh1DG066700 Rh1DG081800 Rh1DG184300 Rh1DG401900 Rh1DG402700 Rh1DG407000 Rh1DG407600 Rh2AG200800 Rh2AG201000 Rh2AG521000 Rh2BG066200 Rh2BG066300 Rh2BG073900 Rh2BG373500 Rh2BG417600 Rh2BG662600 Rh2DG066200 Rh2DG072000 Rh2DG390000 Rh2DG677700 Rh3CG020200 Rh3CG021500 Rh3CG081200 Rh4AG209600 Rh4AG362600 Rh4AG362700 Rh4AG397200 Rh4BG209800 Rh4BG209900 Rh4BG210000 Rh4CG220800 Rh4CG271300 Rh4CG388000 Rh4DG029800 Rh4DG368700 Rh4DG403900 Rh5AG035900 Rh5BG034600 Rh5BG034900 Rh5DG228700 Rh5DG228800 Rh6AG355900 Rh6CG083600 Rh6CG229000 Rh6CG229100 Rh6CG229700 Rh6CG346500 Rh6CG346600 Rh7AG362300 Rh7AG362400 Rh7AG363200 Rh7AG365100 Rh7CG380900 Rh7CG381000 Rh7CG381600 Rh7DG437600
rosa_wichuraiana Rw0G004580 Rw0G004590 Rw0G005750 Rw0G006640 Rw0G007050 Rw0G008040 Rw0G012200 Rw0G013750 Rw0G016590 Rw1G006090 Rw1G012040 Rw1G036130 Rw1G036270 Rw1G036290 Rw1G036420 Rw1G036430 Rw1G036590 Rw2G003560 Rw2G005130 Rw2G005980 Rw2G006090 Rw2G015980 Rw2G016000 Rw2G043010 Rw2G053520 Rw4G018760 Rw4G022000 Rw4G034250 Rw5G003280 Rw5G020380 Rw5G020390 Rw6G008210 Rw6G031000 Rw7G030830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1008
AccB1I GGYRCC 1 cut(s) 313
AciI CCGC 3 cut(s) 24, 405, 420
AclI AACGTT 1 cut(s) 845
AclWI GGATC 3 cut(s) 220, 509, 1121
AcuI CTGAAG 1 cut(s) 1024
AfaI GTAC 7 cut(s) 210, 264, 269, 611, 697, 766, 894
AfiI CCNNNNNNNGG 3 cut(s) 411, 496, 641
AgeI ACCGGT 1 cut(s) 310
AgsI TTSAA 7 cut(s) 159, 164, 779, 809, 850, 948, 1130
AhdI GACNNNNNGTC 1 cut(s) 428
AjiI CACGTC 1 cut(s) 824
AluBI AGCT 4 cut(s) 103, 578, 630, 923
AluI AGCT 4 cut(s) 103, 578, 630, 923
Alw26I GTCTC 2 cut(s) 550, 657
AlwI GGATC 3 cut(s) 220, 509, 1121
Ama87I CYCGRG 1 cut(s) 896
AoxI GGCC 1 cut(s) 357
ApeKI GCWGC 3 cut(s) 103, 242, 839
AsiGI ACCGGT 1 cut(s) 310
Asp700I GAANNNNTTC 1 cut(s) 66
AspLEI GCGC 1 cut(s) 198
AsuII TTCGAA 1 cut(s) 965
AvaI CYCGRG 1 cut(s) 896
BaeI ACNNNNGTAYC 2 cut(s) 876, 909
BanI GGYRCC 1 cut(s) 313
BbsI GAAGAC 1 cut(s) 292
BbvI GCAGC 3 cut(s) 90, 229, 826
BccI CCATC 5 cut(s) 41, 144, 662, 1024, 1129
BceAI ACGGC 2 cut(s) 37, 433
BclI TGATCA 1 cut(s) 118
BcoDI GTCTC 2 cut(s) 550, 657
BfaI CTAG 1 cut(s) 234
BisI GCNGC 3 cut(s) 104, 243, 840
BlsI GCNGC 3 cut(s) 105, 244, 841
BmcAI AGTACT 4 cut(s) 210, 264, 697, 894
BmeRI GACNNNNNGTC 1 cut(s) 428
BmeT110I CYCGRG 1 cut(s) 896
BmgBI CACGTC 1 cut(s) 824
BmiI GGNNCC 2 cut(s) 111, 315
BmsI GCATC 1 cut(s) 968
BpiI GAAGAC 1 cut(s) 292
Bpu14I TTCGAA 1 cut(s) 965
BsaBI GATNNNNATC 3 cut(s) 31, 174, 1034
BsaJI CCNNGG 2 cut(s) 253, 346
BsaWI WCCGGW 2 cut(s) 310, 411
Bsc4I CCNNNNNNNGG 3 cut(s) 411, 496, 641
Bse118I RCCGGY 1 cut(s) 310
Bse8I GATNNNNATC 3 cut(s) 31, 174, 1034
BseDI CCNNGG 2 cut(s) 253, 346
BseGI GGATG 4 cut(s) 32, 526, 612, 983
BseJI GATNNNNATC 3 cut(s) 31, 174, 1034
BseLI CCNNNNNNNGG 3 cut(s) 411, 496, 641
BseMII CTCAG 1 cut(s) 200
BseRI GAGGAG 1 cut(s) 435
BseXI GCAGC 3 cut(s) 90, 229, 826
BsgI GTGCAG 1 cut(s) 228
BshFI GGCC 1 cut(s) 359
BshNI GGYRCC 1 cut(s) 313
BshTI ACCGGT 1 cut(s) 310
BsiHKCI CYCGRG 1 cut(s) 896
BsiSI CCGG 2 cut(s) 311, 412
BslI CCNNNNNNNGG 3 cut(s) 411, 496, 641
BsmAI GTCTC 2 cut(s) 550, 657
BsmBI CGTCTC 1 cut(s) 657
BsnI GGCC 1 cut(s) 359
BsoBI CYCGRG 1 cut(s) 896
Bsp119I TTCGAA 1 cut(s) 965
Bsp1407I TGTACA 2 cut(s) 267, 764
Bsp143I GATC 7 cut(s) 118, 225, 514, 559, 598, 871, 1113
Bsp19I CCATGG 1 cut(s) 346
BspACI CCGC 3 cut(s) 24, 405, 420
BspANI GGCC 1 cut(s) 359
BspCNI CTCAG 1 cut(s) 199
BspHI TCATGA 1 cut(s) 222
BspLI GGNNCC 2 cut(s) 111, 315
BspPI GGATC 3 cut(s) 220, 509, 1121
BspT104I TTCGAA 1 cut(s) 965
BspT107I GGYRCC 1 cut(s) 313
BsrFI RCCGGY 1 cut(s) 310
BsrGI TGTACA 2 cut(s) 267, 764
BssAI RCCGGY 1 cut(s) 310
BssECI CCNNGG 2 cut(s) 253, 346
BssMI GATC 7 cut(s) 118, 225, 514, 559, 598, 871, 1113
BssT1I CCWWGG 2 cut(s) 253, 346
Bst4CI ACNGT 4 cut(s) 139, 267, 291, 544
Bst6I CTCTTC 1 cut(s) 72
BstAUI TGTACA 2 cut(s) 267, 764
BstBI TTCGAA 1 cut(s) 965
BstC8I GCNNGC 3 cut(s) 318, 878, 983
BstDEI CTNAG 2 cut(s) 186, 392
BstDSI CCRYGG 1 cut(s) 346
BstENI CCTNNNNNAGG 1 cut(s) 494
BstF5I GGATG 4 cut(s) 32, 526, 612, 983
BstHHI GCGC 1 cut(s) 198
BstKTI GATC 7 cut(s) 121, 228, 517, 562, 601, 874, 1116
BstMAI GTCTC 2 cut(s) 550, 657
BstMBI GATC 7 cut(s) 118, 225, 514, 559, 598, 871, 1113
BstMWI GCNNNNNNNGC 2 cut(s) 202, 584
BstV1I GCAGC 3 cut(s) 90, 229, 826
BstV2I GAAGAC 1 cut(s) 292
BsuRI GGCC 1 cut(s) 359
BtgI CCRYGG 1 cut(s) 346
BtrI CACGTC 1 cut(s) 824
BtsCI GGATG 4 cut(s) 32, 526, 612, 983
Cac8I GCNNGC 3 cut(s) 318, 878, 983
CciI TCATGA 1 cut(s) 222
CfoI GCGC 1 cut(s) 198
Cfr10I RCCGGY 1 cut(s) 310
Csp6I GTAC 7 cut(s) 209, 263, 268, 610, 696, 765, 893
CspAI ACCGGT 1 cut(s) 310
CviAII CATG 6 cut(s) 122, 217, 223, 347, 455, 1023
CviQI GTAC 7 cut(s) 209, 263, 268, 610, 696, 765, 893
DdeI CTNAG 2 cut(s) 186, 392
DpnI GATC 7 cut(s) 120, 227, 516, 561, 600, 873, 1115
DpnII GATC 7 cut(s) 118, 225, 514, 559, 598, 871, 1113
DriI GACNNNNNGTC 1 cut(s) 428
Eam1104I CTCTTC 1 cut(s) 72
Eam1105I GACNNNNNGTC 1 cut(s) 428
EarI CTCTTC 1 cut(s) 72
EciI GGCGGA 2 cut(s) 39, 435
Eco130I CCWWGG 2 cut(s) 253, 346
Eco57I CTGAAG 1 cut(s) 1024
Eco88I CYCGRG 1 cut(s) 896
EcoNI CCTNNNNNAGG 1 cut(s) 494
EcoT14I CCWWGG 2 cut(s) 253, 346
ErhI CCWWGG 2 cut(s) 253, 346
Esp3I CGTCTC 1 cut(s) 657
FaeI CATG 6 cut(s) 125, 220, 226, 350, 458, 1026
FatI CATG 6 cut(s) 121, 216, 222, 346, 454, 1022
FauI CCCGC 1 cut(s) 412
FbaI TGATCA 1 cut(s) 118
Fnu4HI GCNGC 3 cut(s) 104, 243, 840
FokI GGATG 4 cut(s) 39, 513, 619, 990
Fsp4HI GCNGC 3 cut(s) 104, 243, 840
FspBI CTAG 1 cut(s) 234
GlaI GCGC 1 cut(s) 197
GluI GCNGC 3 cut(s) 104, 243, 840
HaeIII GGCC 1 cut(s) 359
HapII CCGG 2 cut(s) 311, 412
HhaI GCGC 1 cut(s) 198
Hin1II CATG 6 cut(s) 125, 220, 226, 350, 458, 1026
Hin6I GCGC 1 cut(s) 196
HinP1I GCGC 1 cut(s) 196
HinfI GANTC 7 cut(s) 16, 371, 708, 736, 1081, 1091, 1134
HpaII CCGG 2 cut(s) 311, 412
Hpy166II GTNNAC 2 cut(s) 146, 856
Hpy188I TCNGA 7 cut(s) 46, 55, 280, 378, 692, 1080, 1096
Hpy188III TCNNGA 2 cut(s) 223, 827
Hpy8I GTNNAC 2 cut(s) 146, 856
HpyAV CCTTC 1 cut(s) 1124
HpyCH4III ACNGT 4 cut(s) 139, 267, 291, 544
HpyCH4IV ACGT 2 cut(s) 823, 845
HpyCH4V TGCA 5 cut(s) 245, 320, 587, 733, 842
HpyF10VI GCNNNNNNNGC 2 cut(s) 202, 584
HpyF3I CTNAG 2 cut(s) 186, 392
HpySE526I ACGT 2 cut(s) 823, 845
Hsp92II CATG 6 cut(s) 125, 220, 226, 350, 458, 1026
HspAI GCGC 1 cut(s) 196
Ksp22I TGATCA 1 cut(s) 118
Kzo9I GATC 7 cut(s) 118, 225, 514, 559, 598, 871, 1113
LpnPI CCDG 8 cut(s) 92, 102, 324, 330, 425, 573, 812, 995
Lsp1109I GCAGC 3 cut(s) 90, 229, 826
LweI GCATC 1 cut(s) 968
MaeI CTAG 1 cut(s) 234
MaeII ACGT 2 cut(s) 823, 845
MaeIII GTNAC 3 cut(s) 306, 566, 644
MalI GATC 7 cut(s) 120, 227, 516, 561, 600, 873, 1115
MboI GATC 7 cut(s) 118, 225, 514, 559, 598, 871, 1113
MboII GAAGA 5 cut(s) 59, 297, 431, 547, 1030
MfeI CAATTG 2 cut(s) 159, 860
MluCI AATT 8 cut(s) 159, 472, 535, 621, 682, 860, 943, 988
MlyI GAGTC 3 cut(s) 10, 730, 1128
MmeI TCCRAC 1 cut(s) 75
MnlI CCTC 6 cut(s) 240, 370, 453, 456, 500, 892
MroXI GAANNNNTTC 1 cut(s) 66
MseI TTAA 1 cut(s) 620
MslI CAYNNNNRTG 1 cut(s) 221
MspI CCGG 2 cut(s) 311, 412
MunI CAATTG 2 cut(s) 159, 860
MwoI GCNNNNNNNGC 2 cut(s) 202, 584
NcoI CCATGG 1 cut(s) 346
NdeII GATC 7 cut(s) 118, 225, 514, 559, 598, 871, 1113
NlaIII CATG 6 cut(s) 125, 220, 226, 350, 458, 1026
NlaIV GGNNCC 2 cut(s) 111, 315
NmeAIII GCCGAG 1 cut(s) 527
NmuCI GTSAC 2 cut(s) 566, 644
NspV TTCGAA 1 cut(s) 965
PaeR7I CTCGAG 1 cut(s) 896
PagI TCATGA 1 cut(s) 222
PdmI GAANNNNTTC 1 cut(s) 66
PfeI GAWTC 4 cut(s) 371, 708, 1081, 1091
PinAI ACCGGT 1 cut(s) 310
PkrI GCNGC 3 cut(s) 105, 244, 841
PleI GAGTC 3 cut(s) 10, 730, 1128
PpsI GAGTC 3 cut(s) 10, 730, 1128
PsiI TTATAA 1 cut(s) 1008
Psp1406I AACGTT 1 cut(s) 845
PspN4I GGNNCC 2 cut(s) 111, 315
PspXI VCTCGAGB 1 cut(s) 896
RsaI GTAC 7 cut(s) 210, 264, 269, 611, 697, 766, 894
RsaNI GTAC 7 cut(s) 209, 263, 268, 610, 696, 765, 893
RseI CAYNNNNRTG 1 cut(s) 221
SaqAI TTAA 1 cut(s) 620
SatI GCNGC 3 cut(s) 104, 243, 840
Sau3AI GATC 7 cut(s) 118, 225, 514, 559, 598, 871, 1113
ScaI AGTACT 4 cut(s) 210, 264, 697, 894
SchI GAGTC 3 cut(s) 10, 730, 1128
SfaNI GCATC 1 cut(s) 968
Sfr274I CTCGAG 1 cut(s) 896
SfuI TTCGAA 1 cut(s) 965
SlaI CTCGAG 1 cut(s) 896
SmiMI CAYNNNNRTG 1 cut(s) 221
SmlI CTYRAG 1 cut(s) 896
SmoI CTYRAG 1 cut(s) 896
Sse9I AATT 8 cut(s) 159, 472, 535, 621, 682, 860, 943, 988
SsiI CCGC 3 cut(s) 24, 405, 420
SspMI CTAG 1 cut(s) 234
StyI CCWWGG 2 cut(s) 253, 346
TaaI ACNGT 4 cut(s) 139, 267, 291, 544
TaiI ACGT 2 cut(s) 826, 848
TaqI TCGA 5 cut(s) 558, 711, 739, 897, 965
TasI AATT 8 cut(s) 159, 472, 535, 621, 682, 860, 943, 988
TatI WGTACW 6 cut(s) 208, 262, 267, 695, 764, 892
TfiI GAWTC 4 cut(s) 371, 708, 1081, 1091
Tru1I TTAA 1 cut(s) 620
Tru9I TTAA 1 cut(s) 620
TseFI GTSAC 2 cut(s) 566, 644
TseI GCWGC 3 cut(s) 103, 242, 839
Tsp45I GTSAC 2 cut(s) 566, 644
TspDTI ATGAA 4 cut(s) 17, 339, 425, 933
TspGWI ACGGA 1 cut(s) 439
XagI CCTNNNNNAGG 1 cut(s) 494
XhoI CTCGAG 1 cut(s) 896
XmnI GAANNNNTTC 1 cut(s) 66
XspI CTAG 1 cut(s) 234
ZrmI AGTACT 4 cut(s) 210, 264, 697, 894
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.