Rroxscaffold_2G00152170

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000064
Physical Location & Seq
Forward (+)
89234056 .. 89237362
3307 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00152170.1

Sequence Viewer

Length: 924 bp
ATGGTGTTCGGTAAGTCTAGGACTAAAGCTTGGCCCCAAAAGGGAAAAGGGCCGCCTCACCACATACTAGGGACTCTTCTCCATTGTTGTTTGTTTGACTCGTTAGCGACAACGAAGCGACACCGGCACCTTGACATTAGAGACGAAAAACTTGGTGCCCGCAATTGCATAAGACATGAAGTGACCATAGTCGGATGGAAACTCGGGCGAGAAGGACCAAATTGCATAAAGGATAGCTCAGAGGAGAAATACCAAGAACGAACAACAAGATCAACCATGTCTTCACCAGAGACAGACAAATTTTATCGTGAACGCTTTGATTATTATGTTCACAAGGCTATAATTTCAGCAGATCCGATACTAAATACAAAGGAGTGCATTTTTGTCGTCGTAACTCAGCCCTTCTGGCAGTTGGCTTTTATTAGACTCGGGAAAGACTCAACTTGGACTTATGTTGACCGACGTTACTGTGCTCGTGGAGTCGATGAAGTTGTTTTTCTTGAAGATAAGTTTTATGGTGTTCAATCTGATAGCAGAGTTTTATCTTTTAAGGTTAACACTCATGTTCACTCCAACCTAAAATTTGCTGCTCGCCGCATTGGAACAGACTATGGGTACAAGAGTTATCTAGTGTATTCAATTGAGAAAGAATTGTTGTTAGTTCATAGGCATTTTGAGGATGCGAGACGTACAGTGAAATTCGATGTTTATAAACTGAATTTCAAAAACCGTAAGTGGACTGAGATAAACAATTTAGGTGATGTTGCTCTCTTTGTGGGTGATAACTCCACATTTTCCGTATTGGCGTCAAGCTTTCGAGGATGTCTACCAAATTGCATATACTTTACCCATGACAGTAATAAGAGGAAAGTACAGTACTTGGGGCCTGATGGTCCTCGTGATTTTGGCGTGCCGCGTGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295 F-box F-box-like

Protein Analysis

307

Amino Acids

35.72

Weight (kDa)

9.43

Isoelectric Point (pI)

38.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_KIB1-4 PF03478 88 - 291 7e-43 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000064)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04090 FvH4_1g04091 FvH4_1g04110 FvH4_1g04440 FvH4_1g05330 FvH4_1g05332 FvH4_1g05560 FvH4_1g05580 FvH4_1g05590 FvH4_1g05611 FvH4_1g05892 FvH4_1g05900 FvH4_1g06763 FvH4_1g17860 FvH4_1g17860 FvH4_1g17861 FvH4_1g17880 FvH4_1g17902 FvH4_2g08142 FvH4_2g25110 FvH4_2g34380 FvH4_3g19131 FvH4_3g20501 FvH4_4g02770 FvH4_4g02771 FvH4_4g17610 FvH4_4g26951 FvH4_4g28330 FvH4_4g29110 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29690 FvH4_4g29691 FvH4_4g30221 FvH4_4g30230 FvH4_4g30240 FvH4_4g30602 FvH4_4g30610 FvH4_6g01351 FvH4_6g01780 FvH4_6g01890 FvH4_6g47150 FvH4_6g52260 FvH4_6g52703 FvH4_7g23210 FvH4_7g23240 FvH4_7g23350 FvH4_7g28790 FvH4_7g28820 FvH4_7g28830 FvH4_7g28840 FvH4_7g28890 FvH4_7g29040 FvH4_7g29050 FvH4_7g29990 FvH4_7g33871 FvH4_c6g00090
malus_domestica MD01G1180800.v1.1 MD01G1199400.v1.1 MD02G1310000.v1.1 MD04G1097400.v1.1 MD07G1264800.v1.1 MD07G1264900.v1.1 MD07G1270200.v1.1 MD07G1270300.v1.1 MD07G1270500.v1.1 MD10G1043600.v1.1 MD13G1047500.v1.1 MD13G1075200.v1.1
prunus_persica Prupe.1G009400_v2.0.a1 Prupe.1G076100_v2.0.a1 Prupe.1G158300_v2.0.a1 Prupe.1G208900_v2.0.a1 Prupe.1G273900_v2.0.a1 Prupe.2G253900_v2.0.a1 Prupe.2G255700_v2.0.a1 Prupe.2G256000_v2.0.a1 Prupe.2G280300_v2.0.a1 Prupe.2G290700_v2.0.a1 Prupe.3G068500_v2.0.a1 Prupe.4G112800_v2.0.a1 Prupe.5G168600_v2.0.a1 Prupe.5G168800_v2.0.a1 Prupe.5G169100_v2.0.a1 Prupe.8G049800_v2.0.a1
pyrus_communis pycom01g19330 pycom01g20930 pycom01g22010 pycom01g22020 pycom02g26090 pycom07g24330 pycom07g24720 pycom13g04150 pycom420g01320
rosa_chinensis RchiOBHm_Chr1g0324121 RchiOBHm_Chr1g0324251 RchiOBHm_Chr1g0343741 RchiOBHm_Chr1g0355031 RchiOBHm_Chr1g0359461 RchiOBHm_Chr1g0376351 RchiOBHm_Chr1g0376381 RchiOBHm_Chr2g0092531 RchiOBHm_Chr2g0108311 RchiOBHm_Chr2g0108321 RchiOBHm_Chr2g0108331 RchiOBHm_Chr2g0133991 RchiOBHm_Chr2g0156691 RchiOBHm_Chr2g0173801 RchiOBHm_Chr3g0449701 RchiOBHm_Chr3g0449861 RchiOBHm_Chr4g0417201 RchiOBHm_Chr4g0417931 RchiOBHm_Chr4g0424551 RchiOBHm_Chr4g0442921 RchiOBHm_Chr4g0442931 RchiOBHm_Chr5g0032171 RchiOBHm_Chr5g0032191 RchiOBHm_Chr5g0032221 RchiOBHm_Chr6g0258051 RchiOBHm_Chr6g0277851 RchiOBHm_Chr6g0291671 RchiOBHm_Chr6g0291691 RchiOBHm_Chr6g0312761 RchiOBHm_Chr7g0223801 RchiOBHm_Chr7g0224141
rosa_laevigata RLG00000001917 RLG00000001951 RLG00000005804 RLG00000006309 RLG00000006344 RLG00000006458 RLG00000016168 RLG00000016259 RLG00000016305 RLG00000016306 RLG00000019810 RLG00000022223 RLG00000026077 RLG00000026607 RLG00000029703 RLG00000033364 RLG00000034633 RLG00000034637
rosa_multiflora Rmu_co8010764.1_g000001 Rmu_co8262143.1_g000001 Rmu_co8346175.1_g000001 Rmu_sc0000096.1_g000016 Rmu_sc0000544.1_g000003 Rmu_sc0000591.1_g000007 Rmu_sc0000756.1_g000029 Rmu_sc0000841.1_g000017 Rmu_sc0000907.1_g000020 Rmu_sc0000954.1_g000004 Rmu_sc0001195.1_g000007 Rmu_sc0001198.1_g000008 Rmu_sc0001201.1_g000011 Rmu_sc0001201.1_g000013 Rmu_sc0001782.1_g000035 Rmu_sc0001904.1_g000004 Rmu_sc0001962.1_g000039 Rmu_sc0002113.1_g000021 Rmu_sc0002226.1_g000017 Rmu_sc0002226.1_g000020 Rmu_sc0002327.1_g000005 Rmu_sc0002372.1_g000010 Rmu_sc0002372.1_g000014 Rmu_sc0002687.1_g000005 Rmu_sc0003031.1_g000019 Rmu_sc0003076.1_g000014 Rmu_sc0004296.1_g000009 Rmu_sc0004540.1_g000009 Rmu_sc0005369.1_g000002 Rmu_sc0005375.1_g000003 Rmu_sc0005375.1_g000013 Rmu_sc0005742.1_g000008 Rmu_sc0005742.1_g000015 Rmu_sc0005742.1_g000021 Rmu_sc0007419.1_g000011 Rmu_sc0008909.1_g000008 Rmu_sc0010556.1_g000018 Rmu_sc0010999.1_g000008 Rmu_sc0017510.1_g000003 Rmu_sc0017556.1_g000001 Rmu_sc0017900.1_g000007 Rmu_sc0024249.1_g000001 Rmu_sc0032377.1_g000001 Rmu_sc0033569.1_g000001 Rmu_sc0036457.1_g000001 Rmu_sc0041304.1_g000001 Rmu_ssc0000204.1_g000011 Rmu_ssc0000438.1_g000056
rosa_roxburghii Rroxscaffold_1G00048250 Rroxscaffold_1G00048290 Rroxscaffold_2G00092800 Rroxscaffold_2G00110580 Rroxscaffold_2G00135240 Rroxscaffold_2G00135260 Rroxscaffold_2G00135300 Rroxscaffold_2G00149010 Rroxscaffold_2G00149160 Rroxscaffold_2G00149170 Rroxscaffold_2G00149630 Rroxscaffold_2G00151760 Rroxscaffold_2G00151790 Rroxscaffold_2G00152170 Rroxscaffold_3G00225510 Rroxscaffold_3G00249210 Rroxscaffold_4G00277020 Rroxscaffold_4G00281760 Rroxscaffold_4G00281770 Rroxscaffold_4G00281810 Rroxscaffold_4G00281820 Rroxscaffold_4G00282160 Rroxscaffold_4G00310340 Rroxscaffold_5G00361040 Rroxscaffold_5G00363770 Rroxscaffold_5G00366460 Rroxscaffold_5G00378270 Rroxscaffold_5G00378310 Rroxscaffold_5G00379550 Rroxscaffold_5G00379650 Rroxscaffold_6G00422110 Rroxscaffold_6G00427680 Rroxscaffold_7G00175850 Rroxscaffold_7G00175860 Rroxscaffold_7G00190720 Rroxscaffold_7G00190750 Rroxscaffold_7G00190830 Rroxscaffold_7G00196820
rosa_rugosa Rorug01G0395900 Rorug01G0444400 Rorug01G0488100 Rorug02G0001700 Rorug02G0021600 Rorug02G0025700 Rorug02G0152200 Rorug02G0271300 Rorug02G0455800 Rorug02G0572800 Rorug02G0576000 Rorug04G0146300 Rorug04G0172200 Rorug04G0172400 Rorug04G0311300 Rorug04G0312200 Rorug04G0312300 Rorug05G0129500 Rorug05G0129700 Rorug05G0250600 Rorug06G0112600 Rorug06G0220700 Rorug06G0220800 Rorug07G0114600
rosa_samantha Rh1DG066700 Rh1DG081800 Rh1DG184300 Rh1DG401900 Rh1DG402700 Rh1DG407000 Rh1DG407600 Rh2AG200800 Rh2AG201000 Rh2AG521000 Rh2BG066200 Rh2BG066300 Rh2BG073900 Rh2BG373500 Rh2BG417600 Rh2BG662600 Rh2DG066200 Rh2DG072000 Rh2DG390000 Rh2DG677700 Rh3CG020200 Rh3CG021500 Rh3CG081200 Rh4AG209600 Rh4AG362600 Rh4AG362700 Rh4AG397200 Rh4BG209800 Rh4BG209900 Rh4BG210000 Rh4CG220800 Rh4CG271300 Rh4CG388000 Rh4DG029800 Rh4DG368700 Rh4DG403900 Rh5AG035900 Rh5BG034600 Rh5BG034900 Rh5DG228700 Rh5DG228800 Rh6AG355900 Rh6CG083600 Rh6CG229000 Rh6CG229100 Rh6CG229700 Rh6CG346500 Rh6CG346600 Rh7AG362300 Rh7AG362400 Rh7AG363200 Rh7AG365100 Rh7CG380900 Rh7CG381000 Rh7CG381600 Rh7DG437600
rosa_wichuraiana Rw0G004580 Rw0G004590 Rw0G005750 Rw0G006640 Rw0G007050 Rw0G008040 Rw0G012200 Rw0G013750 Rw0G016590 Rw1G006090 Rw1G012040 Rw1G036130 Rw1G036270 Rw1G036290 Rw1G036420 Rw1G036430 Rw1G036590 Rw2G003560 Rw2G005130 Rw2G005980 Rw2G006090 Rw2G015980 Rw2G016000 Rw2G043010 Rw2G053520 Rw4G018760 Rw4G022000 Rw4G034250 Rw5G003280 Rw5G020380 Rw5G020390 Rw6G008210 Rw6G031000 Rw7G030830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 711
AccB1I GGYRCC 2 cut(s) 126, 155
AccI GTMKAC 1 cut(s) 826
AccII CGCG 1 cut(s) 916
AciI CCGC 4 cut(s) 53, 160, 595, 914
AclWI GGATC 1 cut(s) 347
AcsI RAATTY 4 cut(s) 299, 581, 698, 718
AcyI GRCGYC 1 cut(s) 806
AfaI GTAC 4 cut(s) 617, 691, 873, 878
AfiI CCNNNNNNNGG 1 cut(s) 41
AgsI TTSAA 4 cut(s) 503, 524, 639, 724
AluBI AGCT 3 cut(s) 29, 237, 813
AluI AGCT 3 cut(s) 29, 237, 813
Alw21I GWGCWC 1 cut(s) 475
Alw26I GTCTC 3 cut(s) 135, 284, 679
AlwI GGATC 1 cut(s) 347
Ama87I CYCGRG 2 cut(s) 203, 428
AoxI GGCC 3 cut(s) 32, 50, 884
ApeKI GCWGC 1 cut(s) 587
ApoI RAATTY 4 cut(s) 299, 581, 698, 718
AspS9I GGNCC 5 cut(s) 33, 50, 215, 884, 893
AsuHPI GGTGA 4 cut(s) 50, 276, 770, 791
AvaI CYCGRG 2 cut(s) 203, 428
AvaII GGWCC 2 cut(s) 215, 893
BaeGI GKGCMC 1 cut(s) 160
BaeI ACNNNNGTAYC 2 cut(s) 607, 640
BanI GGYRCC 2 cut(s) 126, 155
BauI CACGAG 2 cut(s) 474, 897
BbsI GAAGAC 1 cut(s) 273
Bbv12I GWGCWC 1 cut(s) 475
BbvI GCAGC 1 cut(s) 574
BccI CCATC 2 cut(s) 189, 884
BcgI CGANNNNNNTGC 2 cut(s) 367, 401
BcoDI GTCTC 3 cut(s) 135, 284, 679
BfaI CTAG 3 cut(s) 18, 68, 629
BglI GCCNNNNNGGC 1 cut(s) 406
BisI GCNGC 4 cut(s) 53, 588, 595, 914
BlsI GCNGC 4 cut(s) 54, 589, 596, 915
BmcAI AGTACT 1 cut(s) 878
Bme18I GGWCC 2 cut(s) 215, 893
BmeT110I CYCGRG 2 cut(s) 203, 428
BmgT120I GGNCC 5 cut(s) 33, 50, 215, 884, 893
BmiI GGNNCC 4 cut(s) 35, 128, 157, 885
BmsI GCATC 1 cut(s) 670
BoxI GACNNNNGTC 1 cut(s) 188
BpiI GAAGAC 1 cut(s) 273
BsaHI GRCGYC 1 cut(s) 806
Bsc4I CCNNNNNNNGG 1 cut(s) 41
Bse118I RCCGGY 1 cut(s) 123
BseGI GGATG 3 cut(s) 200, 685, 827
BseLI CCNNNNNNNGG 1 cut(s) 41
BseMII CTCAG 3 cut(s) 252, 410, 732
BseRI GAGGAG 1 cut(s) 257
BseSI GKGCMC 1 cut(s) 160
BseXI GCAGC 1 cut(s) 574
Bsh1236I CGCG 1 cut(s) 916
BshFI GGCC 3 cut(s) 34, 52, 886
BshNI GGYRCC 2 cut(s) 126, 155
BsiHKAI GWGCWC 1 cut(s) 475
BsiHKCI CYCGRG 2 cut(s) 203, 428
BsiSI CCGG 1 cut(s) 124
BslFI GGGAC 1 cut(s) 85
BslI CCNNNNNNNGG 1 cut(s) 41
BsmAI GTCTC 3 cut(s) 135, 284, 679
BsmBI CGTCTC 2 cut(s) 135, 679
BsmFI GGGAC 1 cut(s) 85
BsnI GGCC 3 cut(s) 34, 52, 886
BsoBI CYCGRG 2 cut(s) 203, 428
Bsp1286I GDGCHC 2 cut(s) 160, 475
Bsp143I GATC 2 cut(s) 269, 352
BspACI CCGC 4 cut(s) 53, 160, 595, 914
BspANI GGCC 3 cut(s) 34, 52, 886
BspCNI CTCAG 3 cut(s) 251, 409, 733
BspFNI CGCG 1 cut(s) 916
BspLI GGNNCC 4 cut(s) 35, 128, 157, 885
BspPI GGATC 1 cut(s) 347
BspT107I GGYRCC 2 cut(s) 126, 155
BsrFI RCCGGY 1 cut(s) 123
BssAI RCCGGY 1 cut(s) 123
BssMI GATC 2 cut(s) 269, 352
BssNI GRCGYC 1 cut(s) 806
BssSI CACGAG 2 cut(s) 474, 897
Bst2BI CACGAG 2 cut(s) 474, 897
Bst4CI ACNGT 5 cut(s) 470, 694, 731, 857, 876
Bst6I CTCTTC 1 cut(s) 81
BstACI GRCGYC 1 cut(s) 806
BstC8I GCNNGC 3 cut(s) 160, 592, 911
BstDEI CTNAG 3 cut(s) 238, 396, 741
BstF5I GGATG 3 cut(s) 200, 685, 827
BstFNI CGCG 1 cut(s) 916
BstKTI GATC 2 cut(s) 272, 355
BstMAI GTCTC 3 cut(s) 135, 284, 679
BstMBI GATC 2 cut(s) 269, 352
BstMWI GCNNNNNNNGC 2 cut(s) 124, 406
BstPAI GACNNNNGTC 1 cut(s) 188
BstSLI GKGCMC 1 cut(s) 160
BstUI CGCG 1 cut(s) 916
BstV1I GCAGC 1 cut(s) 574
BstV2I GAAGAC 1 cut(s) 273
BstX2I RGATCY 1 cut(s) 352
BstYI RGATCY 1 cut(s) 352
BsuRI GGCC 3 cut(s) 34, 52, 886
BtsCI GGATG 3 cut(s) 200, 685, 827
BtsIMutI CAGTG 1 cut(s) 699
Cac8I GCNNGC 3 cut(s) 160, 592, 911
Cfr10I RCCGGY 1 cut(s) 123
Cfr13I GGNCC 5 cut(s) 33, 50, 215, 884, 893
CseI GACGC 1 cut(s) 795
Csp6I GTAC 4 cut(s) 616, 690, 872, 877
CviAII CATG 4 cut(s) 176, 277, 563, 851
CviJI RGCY 9 cut(s) 29, 34, 52, 237, 338, 400, 416, 813, 886
CviKI_1 RGCY 9 cut(s) 29, 34, 52, 237, 338, 400, 416, 813, 886
CviQI GTAC 4 cut(s) 616, 690, 872, 877
DdeI CTNAG 3 cut(s) 238, 396, 741
DpnI GATC 2 cut(s) 271, 354
DpnII GATC 2 cut(s) 269, 352
Eam1104I CTCTTC 1 cut(s) 81
EarI CTCTTC 1 cut(s) 81
Eco47I GGWCC 2 cut(s) 215, 893
Eco88I CYCGRG 2 cut(s) 203, 428
EcoO109I RGGNCCY 1 cut(s) 884
Esp3I CGTCTC 2 cut(s) 135, 679
FaeI CATG 4 cut(s) 179, 280, 566, 854
FaqI GGGAC 1 cut(s) 85
FatI CATG 4 cut(s) 175, 276, 562, 850
FauI CCCGC 1 cut(s) 167
FblI GTMKAC 1 cut(s) 826
Fnu4HI GCNGC 4 cut(s) 53, 588, 595, 914
FokI GGATG 3 cut(s) 207, 692, 834
Fsp4HI GCNGC 4 cut(s) 53, 588, 595, 914
FspBI CTAG 3 cut(s) 18, 68, 629
GluI GCNGC 4 cut(s) 53, 588, 595, 914
HaeIII GGCC 3 cut(s) 34, 52, 886
HapII CCGG 1 cut(s) 124
HgaI GACGC 1 cut(s) 795
Hin1I GRCGYC 1 cut(s) 806
Hin1II CATG 4 cut(s) 179, 280, 566, 854
HincII GTYRAC 2 cut(s) 457, 556
HindII GTYRAC 2 cut(s) 457, 556
HindIII AAGCTT 2 cut(s) 27, 811
HinfI GANTC 5 cut(s) 73, 98, 426, 437, 480
HpaI GTTAAC 1 cut(s) 556
HpaII CCGG 1 cut(s) 124
HphI GGTGA 4 cut(s) 50, 276, 770, 791
Hpy166II GTNNAC 7 cut(s) 311, 331, 457, 556, 568, 738, 827
Hpy188I TCNGA 4 cut(s) 194, 241, 357, 529
Hpy188III TCNNGA 4 cut(s) 308, 430, 500, 899
Hpy8I GTNNAC 7 cut(s) 311, 331, 457, 556, 568, 738, 827
Hpy99I CGWCG 2 cut(s) 392, 465
HpyAV CCTTC 2 cut(s) 206, 412
HpyCH4III ACNGT 5 cut(s) 470, 694, 731, 857, 876
HpyCH4IV ACGT 2 cut(s) 463, 688
HpyCH4V TGCA 4 cut(s) 168, 225, 378, 837
HpyF10VI GCNNNNNNNGC 2 cut(s) 124, 406
HpyF3I CTNAG 3 cut(s) 238, 396, 741
HpySE526I ACGT 2 cut(s) 463, 688
Hsp92I GRCGYC 1 cut(s) 806
Hsp92II CATG 4 cut(s) 179, 280, 566, 854
KspAI GTTAAC 1 cut(s) 556
Kzo9I GATC 2 cut(s) 269, 352
LpnPI CCDG 4 cut(s) 137, 300, 391, 900
Lsp1109I GCAGC 1 cut(s) 574
LweI GCATC 1 cut(s) 670
MaeI CTAG 3 cut(s) 18, 68, 629
MaeII ACGT 2 cut(s) 463, 688
MaeIII GTNAC 3 cut(s) 181, 391, 464
MalI GATC 2 cut(s) 271, 354
MboI GATC 2 cut(s) 269, 352
MboII GAAGA 3 cut(s) 68, 273, 515
MfeI CAATTG 2 cut(s) 163, 639
MflI RGATCY 1 cut(s) 352
MhlI GDGCHC 2 cut(s) 160, 475
MlyI GAGTC 5 cut(s) 67, 92, 420, 431, 489
MmeI TCCRAC 2 cut(s) 172, 597
MnlI CCTC 6 cut(s) 66, 235, 670, 812, 858, 906
MseI TTAA 2 cut(s) 549, 555
MspI CCGG 1 cut(s) 124
MunI CAATTG 2 cut(s) 163, 639
MvnI CGCG 1 cut(s) 916
MwoI GCNNNNNNNGC 2 cut(s) 124, 406
NdeII GATC 2 cut(s) 269, 352
NlaIII CATG 4 cut(s) 179, 280, 566, 854
NlaIV GGNNCC 4 cut(s) 35, 128, 157, 885
NmuCI GTSAC 1 cut(s) 181
PkrI GCNGC 4 cut(s) 54, 589, 596, 915
PleI GAGTC 5 cut(s) 67, 92, 420, 431, 488
PpsI GAGTC 5 cut(s) 67, 92, 420, 431, 488
PshAI GACNNNNGTC 1 cut(s) 188
PsiI TTATAA 1 cut(s) 711
PspN4I GGNNCC 4 cut(s) 35, 128, 157, 885
PspPI GGNCC 5 cut(s) 33, 50, 215, 884, 893
PsuI RGATCY 1 cut(s) 352
RsaI GTAC 4 cut(s) 617, 691, 873, 878
RsaNI GTAC 4 cut(s) 616, 690, 872, 877
SaqAI TTAA 2 cut(s) 549, 555
SatI GCNGC 4 cut(s) 53, 588, 595, 914
Sau3AI GATC 2 cut(s) 269, 352
Sau96I GGNCC 5 cut(s) 33, 50, 215, 884, 893
ScaI AGTACT 1 cut(s) 878
SchI GAGTC 5 cut(s) 67, 92, 420, 431, 489
SduI GDGCHC 2 cut(s) 160, 475
SetI ASST 9 cut(s) 31, 132, 239, 466, 555, 579, 691, 760, 815
SfaNI GCATC 1 cut(s) 670
SinI GGWCC 2 cut(s) 215, 893
SsiI CCGC 4 cut(s) 53, 160, 595, 914
SspMI CTAG 3 cut(s) 18, 68, 629
TaaI ACNGT 5 cut(s) 470, 694, 731, 857, 876
TaiI ACGT 2 cut(s) 466, 691
TaqI TCGA 3 cut(s) 483, 702, 817
TaqII GACCGA 1 cut(s) 474
TatI WGTACW 2 cut(s) 871, 876
TauI GCSGC 3 cut(s) 55, 597, 916
Tru1I TTAA 2 cut(s) 549, 555
Tru9I TTAA 2 cut(s) 549, 555
TscAI CASTG 1 cut(s) 699
TseFI GTSAC 1 cut(s) 181
TseI GCWGC 1 cut(s) 587
Tsp45I GTSAC 1 cut(s) 181
TspDTI ATGAA 3 cut(s) 192, 501, 653
TspGWI ACGGA 1 cut(s) 787
TspRI CASTG 1 cut(s) 699
VpaK11BI GGWCC 2 cut(s) 215, 893
XapI RAATTY 4 cut(s) 299, 581, 698, 718
XmiI GTMKAC 1 cut(s) 826
XspI CTAG 3 cut(s) 18, 68, 629
ZrmI AGTACT 1 cut(s) 878
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.