MD01G1180800.v1.1

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
OG0000064
Physical Location & Seq
Reverse (-)
28001481 .. 28002652
1172 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1180800.v1.1.491

Sequence Viewer

Length: 1149 bp
ATGTCAGATTGGGCCGCGTTGCCGACAGAGATTTTAAATTTAGTTGTAGGGAGACTGGAGACACCAAAAGAATTTAGCTTTGTTTGCAGGTCATGGTGTTCGGCTGCAAAGGGTATACAGACCCATTGTGCCGTCACGACAACTCCGATGATGTTGATTTCTTCTGATGCAGAGAATGATAAGTGGCATTTATACAATCCGGTGACCGACAAGGTTCTTAAAACCCAATTGAGTTTGGGAAGACAACTATTCTGTGGGTCTTCAAAAGGATGGTTAATTGTTGTGGATGAGAAACGTGTTGTGTCACTGATAAATCCATTCCTTTTTGGTGTTGGAGGGAGAAGAGATCATGAAAAGTCAATAATTCGCCTTCCTCCGCTAGGCCCTGCAGATTTGAATCGGCCTCCTCATCGTGGAGATTATTTTGTCTACAAGGCTACAATTTCAGAAGATCCAATACTAAATGCCGACAACTGCATTGTTATGGTCATGTTTGCGAACATGTACAAATTGGCTTTTATTCGACTTAACAAAGACAGTAATTGGACTTATGTCCCTGAAACGGAAACGGTTGAGCAAAGAAGGTTTTTTATCGCTGAAGTTGTTACAGTTGAAGAGAGATTTTATCTTGTTGATTATTTCCGTCAACTCTATTCTTTGGATGTTGCTACTCAGTCTGTGTCACCTGTGAAAGTGGTTTTAGGCGGATTTGTAGTCGATGACAACTATATTTGCAAGGAATATCTTGTGGTTTGTAATGAGAAAACAATGCTGATCGTTCGAAGGTGCATGGACCATTATGACGATCATGAGACAAAGACAAAAAGATTCAGAGTCTTTGAACTAAATATCAGCAAGGGTGAGTGCACGGAGAAGAACACTTTAGGTGACGTTGCTTTGTTTCTGGGAAACAACTCTTCAATATCTGTTTGTGCTTCAAAGTCGGGATATCGAGCGAATTGCATATACTTCATTCATGATCATCTTGTGGTTGAAGGAGGCCTTGGACCAAGTGGAGCTTTTGATTATGGCGTCTACAACGTCGAGGAAAAGAGGCTTTTAGAAAATCCGTTCCACGGAGATGCTGGGACTCTGATGAGCAAGACCGATGTACCTCCGATATGGATTCTACCAACTTATAATTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295

Protein Analysis

383

Amino Acids

43.33

Weight (kDa)

6.02

Isoelectric Point (pI)

40.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_KIB1-4 PF03478 64 - 347 2.9e-42 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000064)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04090 FvH4_1g04091 FvH4_1g04110 FvH4_1g04440 FvH4_1g05330 FvH4_1g05332 FvH4_1g05560 FvH4_1g05580 FvH4_1g05590 FvH4_1g05611 FvH4_1g05892 FvH4_1g05900 FvH4_1g06763 FvH4_1g17860 FvH4_1g17860 FvH4_1g17861 FvH4_1g17880 FvH4_1g17902 FvH4_2g08142 FvH4_2g25110 FvH4_2g34380 FvH4_3g19131 FvH4_3g20501 FvH4_4g02770 FvH4_4g02771 FvH4_4g17610 FvH4_4g26951 FvH4_4g28330 FvH4_4g29110 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29690 FvH4_4g29691 FvH4_4g30221 FvH4_4g30230 FvH4_4g30240 FvH4_4g30602 FvH4_4g30610 FvH4_6g01351 FvH4_6g01780 FvH4_6g01890 FvH4_6g47150 FvH4_6g52260 FvH4_6g52703 FvH4_7g23210 FvH4_7g23240 FvH4_7g23350 FvH4_7g28790 FvH4_7g28820 FvH4_7g28830 FvH4_7g28840 FvH4_7g28890 FvH4_7g29040 FvH4_7g29050 FvH4_7g29990 FvH4_7g33871 FvH4_c6g00090
malus_domestica MD01G1180800.v1.1 MD01G1199400.v1.1 MD02G1310000.v1.1 MD04G1097400.v1.1 MD07G1264800.v1.1 MD07G1264900.v1.1 MD07G1270200.v1.1 MD07G1270300.v1.1 MD07G1270500.v1.1 MD10G1043600.v1.1 MD13G1047500.v1.1 MD13G1075200.v1.1
prunus_persica Prupe.1G009400_v2.0.a1 Prupe.1G076100_v2.0.a1 Prupe.1G158300_v2.0.a1 Prupe.1G208900_v2.0.a1 Prupe.1G273900_v2.0.a1 Prupe.2G253900_v2.0.a1 Prupe.2G255700_v2.0.a1 Prupe.2G256000_v2.0.a1 Prupe.2G280300_v2.0.a1 Prupe.2G290700_v2.0.a1 Prupe.3G068500_v2.0.a1 Prupe.4G112800_v2.0.a1 Prupe.5G168600_v2.0.a1 Prupe.5G168800_v2.0.a1 Prupe.5G169100_v2.0.a1 Prupe.8G049800_v2.0.a1
pyrus_communis pycom01g19330 pycom01g20930 pycom01g22010 pycom01g22020 pycom02g26090 pycom07g24330 pycom07g24720 pycom13g04150 pycom420g01320
rosa_chinensis RchiOBHm_Chr1g0324121 RchiOBHm_Chr1g0324251 RchiOBHm_Chr1g0343741 RchiOBHm_Chr1g0355031 RchiOBHm_Chr1g0359461 RchiOBHm_Chr1g0376351 RchiOBHm_Chr1g0376381 RchiOBHm_Chr2g0092531 RchiOBHm_Chr2g0108311 RchiOBHm_Chr2g0108321 RchiOBHm_Chr2g0108331 RchiOBHm_Chr2g0133991 RchiOBHm_Chr2g0156691 RchiOBHm_Chr2g0173801 RchiOBHm_Chr3g0449701 RchiOBHm_Chr3g0449861 RchiOBHm_Chr4g0417201 RchiOBHm_Chr4g0417931 RchiOBHm_Chr4g0424551 RchiOBHm_Chr4g0442921 RchiOBHm_Chr4g0442931 RchiOBHm_Chr5g0032171 RchiOBHm_Chr5g0032191 RchiOBHm_Chr5g0032221 RchiOBHm_Chr6g0258051 RchiOBHm_Chr6g0277851 RchiOBHm_Chr6g0291671 RchiOBHm_Chr6g0291691 RchiOBHm_Chr6g0312761 RchiOBHm_Chr7g0223801 RchiOBHm_Chr7g0224141
rosa_laevigata RLG00000001917 RLG00000001951 RLG00000005804 RLG00000006309 RLG00000006344 RLG00000006458 RLG00000016168 RLG00000016259 RLG00000016305 RLG00000016306 RLG00000019810 RLG00000022223 RLG00000026077 RLG00000026607 RLG00000029703 RLG00000033364 RLG00000034633 RLG00000034637
rosa_multiflora Rmu_co8010764.1_g000001 Rmu_co8262143.1_g000001 Rmu_co8346175.1_g000001 Rmu_sc0000096.1_g000016 Rmu_sc0000544.1_g000003 Rmu_sc0000591.1_g000007 Rmu_sc0000756.1_g000029 Rmu_sc0000841.1_g000017 Rmu_sc0000907.1_g000020 Rmu_sc0000954.1_g000004 Rmu_sc0001195.1_g000007 Rmu_sc0001198.1_g000008 Rmu_sc0001201.1_g000011 Rmu_sc0001201.1_g000013 Rmu_sc0001782.1_g000035 Rmu_sc0001904.1_g000004 Rmu_sc0001962.1_g000039 Rmu_sc0002113.1_g000021 Rmu_sc0002226.1_g000017 Rmu_sc0002226.1_g000020 Rmu_sc0002327.1_g000005 Rmu_sc0002372.1_g000010 Rmu_sc0002372.1_g000014 Rmu_sc0002687.1_g000005 Rmu_sc0003031.1_g000019 Rmu_sc0003076.1_g000014 Rmu_sc0004296.1_g000009 Rmu_sc0004540.1_g000009 Rmu_sc0005369.1_g000002 Rmu_sc0005375.1_g000003 Rmu_sc0005375.1_g000013 Rmu_sc0005742.1_g000008 Rmu_sc0005742.1_g000015 Rmu_sc0005742.1_g000021 Rmu_sc0007419.1_g000011 Rmu_sc0008909.1_g000008 Rmu_sc0010556.1_g000018 Rmu_sc0010999.1_g000008 Rmu_sc0017510.1_g000003 Rmu_sc0017556.1_g000001 Rmu_sc0017900.1_g000007 Rmu_sc0024249.1_g000001 Rmu_sc0032377.1_g000001 Rmu_sc0033569.1_g000001 Rmu_sc0036457.1_g000001 Rmu_sc0041304.1_g000001 Rmu_ssc0000204.1_g000011 Rmu_ssc0000438.1_g000056
rosa_roxburghii Rroxscaffold_1G00048250 Rroxscaffold_1G00048290 Rroxscaffold_2G00092800 Rroxscaffold_2G00110580 Rroxscaffold_2G00135240 Rroxscaffold_2G00135260 Rroxscaffold_2G00135300 Rroxscaffold_2G00149010 Rroxscaffold_2G00149160 Rroxscaffold_2G00149170 Rroxscaffold_2G00149630 Rroxscaffold_2G00151760 Rroxscaffold_2G00151790 Rroxscaffold_2G00152170 Rroxscaffold_3G00225510 Rroxscaffold_3G00249210 Rroxscaffold_4G00277020 Rroxscaffold_4G00281760 Rroxscaffold_4G00281770 Rroxscaffold_4G00281810 Rroxscaffold_4G00281820 Rroxscaffold_4G00282160 Rroxscaffold_4G00310340 Rroxscaffold_5G00361040 Rroxscaffold_5G00363770 Rroxscaffold_5G00366460 Rroxscaffold_5G00378270 Rroxscaffold_5G00378310 Rroxscaffold_5G00379550 Rroxscaffold_5G00379650 Rroxscaffold_6G00422110 Rroxscaffold_6G00427680 Rroxscaffold_7G00175850 Rroxscaffold_7G00175860 Rroxscaffold_7G00190720 Rroxscaffold_7G00190750 Rroxscaffold_7G00190830 Rroxscaffold_7G00196820
rosa_rugosa Rorug01G0395900 Rorug01G0444400 Rorug01G0488100 Rorug02G0001700 Rorug02G0021600 Rorug02G0025700 Rorug02G0152200 Rorug02G0271300 Rorug02G0455800 Rorug02G0572800 Rorug02G0576000 Rorug04G0146300 Rorug04G0172200 Rorug04G0172400 Rorug04G0311300 Rorug04G0312200 Rorug04G0312300 Rorug05G0129500 Rorug05G0129700 Rorug05G0250600 Rorug06G0112600 Rorug06G0220700 Rorug06G0220800 Rorug07G0114600
rosa_samantha Rh1DG066700 Rh1DG081800 Rh1DG184300 Rh1DG401900 Rh1DG402700 Rh1DG407000 Rh1DG407600 Rh2AG200800 Rh2AG201000 Rh2AG521000 Rh2BG066200 Rh2BG066300 Rh2BG073900 Rh2BG373500 Rh2BG417600 Rh2BG662600 Rh2DG066200 Rh2DG072000 Rh2DG390000 Rh2DG677700 Rh3CG020200 Rh3CG021500 Rh3CG081200 Rh4AG209600 Rh4AG362600 Rh4AG362700 Rh4AG397200 Rh4BG209800 Rh4BG209900 Rh4BG210000 Rh4CG220800 Rh4CG271300 Rh4CG388000 Rh4DG029800 Rh4DG368700 Rh4DG403900 Rh5AG035900 Rh5BG034600 Rh5BG034900 Rh5DG228700 Rh5DG228800 Rh6AG355900 Rh6CG083600 Rh6CG229000 Rh6CG229100 Rh6CG229700 Rh6CG346500 Rh6CG346600 Rh7AG362300 Rh7AG362400 Rh7AG363200 Rh7AG365100 Rh7CG380900 Rh7CG381000 Rh7CG381600 Rh7DG437600
rosa_wichuraiana Rw0G004580 Rw0G004590 Rw0G005750 Rw0G006640 Rw0G007050 Rw0G008040 Rw0G012200 Rw0G013750 Rw0G016590 Rw1G006090 Rw1G012040 Rw1G036130 Rw1G036270 Rw1G036290 Rw1G036420 Rw1G036430 Rw1G036590 Rw2G003560 Rw2G005130 Rw2G005980 Rw2G006090 Rw2G015980 Rw2G016000 Rw2G043010 Rw2G053520 Rw4G018760 Rw4G022000 Rw4G034250 Rw5G003280 Rw5G020380 Rw5G020390 Rw6G008210 Rw6G031000 Rw7G030830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1140
Acc36I ACCTGC 1 cut(s) 78
AccI GTMKAC 3 cut(s) 115, 429, 1035
AccII CGCG 1 cut(s) 17
AciI CCGC 3 cut(s) 15, 377, 705
AclWI GGATC 1 cut(s) 446
AcsI RAATTY 2 cut(s) 37, 71
AcuI CTGAAG 1 cut(s) 618
AcyI GRCGYC 1 cut(s) 1032
AfaI GTAC 2 cut(s) 506, 1113
AfiI CCNNNNNNNGG 4 cut(s) 380, 413, 562, 1076
AflIII ACRYGT 2 cut(s) 295, 501
AgsI TTSAA 7 cut(s) 264, 397, 614, 842, 921, 939, 995
AjuI GAANNNNNNNTTGG 2 cut(s) 987, 1019
AluBI AGCT 2 cut(s) 78, 1019
AluI AGCT 2 cut(s) 78, 1019
Alw21I GWGCWC 1 cut(s) 869
Alw26I GTCTC 3 cut(s) 46, 53, 806
Alw44I GTGCAC 1 cut(s) 865
AlwI GGATC 1 cut(s) 446
AoxI GGCC 4 cut(s) 12, 382, 401, 1000
ApaLI GTGCAC 1 cut(s) 865
ApeKI GCWGC 1 cut(s) 104
ApoI RAATTY 2 cut(s) 37, 71
AspS9I GGNCC 4 cut(s) 12, 383, 793, 1007
AsuHPI GGTGA 4 cut(s) 214, 675, 872, 899
AsuII TTCGAA 1 cut(s) 781
AvaII GGWCC 2 cut(s) 793, 1007
BaeGI GKGCMC 1 cut(s) 869
BaeI ACNNNNGTAYC 2 cut(s) 1095, 1128
BarI GAAGNNNNNNTAC 2 cut(s) 441, 473
BbsI GAAGAC 2 cut(s) 247, 252
Bbv12I GWGCWC 1 cut(s) 869
BbvI GCAGC 1 cut(s) 91
BccI CCATC 1 cut(s) 264
BceAI ACGGC 1 cut(s) 116
BcgI CGANNNNNNTGC 2 cut(s) 942, 976
BclI TGATCA 1 cut(s) 979
BcoDI GTCTC 3 cut(s) 46, 53, 806
BfaI CTAG 1 cut(s) 380
BfmI CTRYAG 1 cut(s) 387
BfuAI ACCTGC 1 cut(s) 78
BisI GCNGC 2 cut(s) 15, 105
BlsI GCNGC 2 cut(s) 16, 106
Bme18I GGWCC 2 cut(s) 793, 1007
BmgT120I GGNCC 4 cut(s) 12, 383, 793, 1007
BmsI GCATC 2 cut(s) 157, 1072
BoxI GACNNNNGTC 1 cut(s) 551
BpiI GAAGAC 2 cut(s) 247, 252
BpmI CTGGAG 1 cut(s) 77
Bpu14I TTCGAA 1 cut(s) 781
BsaBI GATNNNNATC 1 cut(s) 396
BsaHI GRCGYC 1 cut(s) 1032
BsaJI CCNNGG 2 cut(s) 1003, 1075
BsaWI WCCGGW 1 cut(s) 199
BsaXI ACNNNNNCTCC 2 cut(s) 127, 157
Bsc4I CCNNNNNNNGG 4 cut(s) 380, 413, 562, 1076
Bse1I ACTGG 1 cut(s) 60
Bse8I GATNNNNATC 1 cut(s) 396
BseDI CCNNGG 2 cut(s) 1003, 1075
BseGI GGATG 3 cut(s) 275, 292, 667
BseJI GATNNNNATC 1 cut(s) 396
BseLI CCNNNNNNNGG 4 cut(s) 380, 413, 562, 1076
BseMII CTCAG 1 cut(s) 686
BseNI ACTGG 1 cut(s) 60
BseRI GAGGAG 1 cut(s) 396
BseSI GKGCMC 1 cut(s) 869
BseXI GCAGC 1 cut(s) 91
BseYI CCCAGC 1 cut(s) 1085
Bsh1236I CGCG 1 cut(s) 17
BshFI GGCC 4 cut(s) 14, 384, 403, 1002
BsiHKAI GWGCWC 1 cut(s) 869
BsiSI CCGG 1 cut(s) 200
BslFI GGGAC 2 cut(s) 539, 1102
BslI CCNNNNNNNGG 4 cut(s) 380, 413, 562, 1076
BsmAI GTCTC 3 cut(s) 46, 53, 806
BsmFI GGGAC 2 cut(s) 539, 1102
BsnI GGCC 4 cut(s) 14, 384, 403, 1002
Bsp119I TTCGAA 1 cut(s) 781
Bsp1286I GDGCHC 1 cut(s) 869
Bsp1407I TGTACA 1 cut(s) 504
Bsp143I GATC 5 cut(s) 346, 451, 774, 805, 979
BspACI CCGC 3 cut(s) 15, 377, 705
BspANI GGCC 4 cut(s) 14, 384, 403, 1002
BspCNI CTCAG 1 cut(s) 685
BspFNI CGCG 1 cut(s) 17
BspHI TCATGA 3 cut(s) 349, 808, 976
BspMAI CTGCAG 1 cut(s) 391
BspMI ACCTGC 1 cut(s) 78
BspPI GGATC 1 cut(s) 446
BspT104I TTCGAA 1 cut(s) 781
BsrGI TGTACA 1 cut(s) 504
BsrI ACTGG 1 cut(s) 60
BssECI CCNNGG 2 cut(s) 1003, 1075
BssMI GATC 5 cut(s) 346, 451, 774, 805, 979
BssNAI GTATAC 1 cut(s) 116
BssNI GRCGYC 1 cut(s) 1032
BssT1I CCWWGG 1 cut(s) 1003
Bst1107I GTATAC 1 cut(s) 116
Bst4CI ACNGT 3 cut(s) 539, 571, 610
Bst6I CTCTTC 3 cut(s) 337, 609, 922
BstACI GRCGYC 1 cut(s) 1032
BstAUI TGTACA 1 cut(s) 504
BstBI TTCGAA 1 cut(s) 781
BstDEI CTNAG 1 cut(s) 672
BstDSI CCRYGG 1 cut(s) 1075
BstEII GGTNACC 1 cut(s) 202
BstENI CCTNNNNNAGG 1 cut(s) 378
BstF5I GGATG 3 cut(s) 275, 292, 667
BstFNI CGCG 1 cut(s) 17
BstKTI GATC 5 cut(s) 349, 454, 777, 808, 982
BstMAI GTCTC 3 cut(s) 46, 53, 806
BstMBI GATC 5 cut(s) 346, 451, 774, 805, 979
BstMWI GCNNNNNNNGC 1 cut(s) 84
BstNSI RCATGY 1 cut(s) 505
BstPAI GACNNNNGTC 1 cut(s) 551
BstPI GGTNACC 1 cut(s) 202
BstSFI CTRYAG 1 cut(s) 387
BstSLI GKGCMC 1 cut(s) 869
BstUI CGCG 1 cut(s) 17
BstV1I GCAGC 1 cut(s) 91
BstV2I GAAGAC 2 cut(s) 247, 252
BstX2I RGATCY 1 cut(s) 451
BstYI RGATCY 1 cut(s) 451
BstZ17I GTATAC 1 cut(s) 116
BsuRI GGCC 4 cut(s) 14, 384, 403, 1002
BtgI CCRYGG 1 cut(s) 1075
BtsCI GGATG 3 cut(s) 275, 292, 667
BtsIMutI CAGTG 1 cut(s) 305
BveI ACCTGC 1 cut(s) 78
CciI TCATGA 3 cut(s) 349, 808, 976
Cfr13I GGNCC 4 cut(s) 12, 383, 793, 1007
CseI GACGC 1 cut(s) 1021
Csp6I GTAC 2 cut(s) 505, 1112
CviAII CATG 7 cut(s) 93, 350, 490, 502, 790, 809, 977
CviQI GTAC 2 cut(s) 505, 1112
DdeI CTNAG 1 cut(s) 672
DpnI GATC 5 cut(s) 348, 453, 776, 807, 981
DpnII GATC 5 cut(s) 346, 451, 774, 805, 979
DraI TTTAAA 1 cut(s) 36
Eam1104I CTCTTC 3 cut(s) 337, 609, 922
EarI CTCTTC 3 cut(s) 337, 609, 922
EciI GGCGGA 1 cut(s) 720
Eco130I CCWWGG 1 cut(s) 1003
Eco147I AGGCCT 1 cut(s) 1002
Eco32I GATATC 1 cut(s) 950
Eco47I GGWCC 2 cut(s) 793, 1007
Eco57I CTGAAG 1 cut(s) 618
Eco91I GGTNACC 1 cut(s) 202
EcoNI CCTNNNNNAGG 1 cut(s) 378
EcoO109I RGGNCCY 1 cut(s) 383
EcoO65I GGTNACC 1 cut(s) 202
EcoRV GATATC 1 cut(s) 950
EcoT14I CCWWGG 1 cut(s) 1003
ErhI CCWWGG 1 cut(s) 1003
FaeI CATG 7 cut(s) 96, 353, 493, 505, 793, 812, 980
FalI AAGNNNNNCTT 4 cut(s) 987, 1019, 1003, 1035
FaqI GGGAC 2 cut(s) 539, 1102
FatI CATG 7 cut(s) 92, 349, 489, 501, 789, 808, 976
FbaI TGATCA 1 cut(s) 979
FblI GTMKAC 3 cut(s) 115, 429, 1035
Fnu4HI GCNGC 2 cut(s) 15, 105
FokI GGATG 3 cut(s) 282, 299, 674
Fsp4HI GCNGC 2 cut(s) 15, 105
FspBI CTAG 1 cut(s) 380
GluI GCNGC 2 cut(s) 15, 105
GsaI CCCAGC 1 cut(s) 1089
GsuI CTGGAG 1 cut(s) 77
HaeIII GGCC 4 cut(s) 14, 384, 403, 1002
HapII CCGG 1 cut(s) 200
HgaI GACGC 1 cut(s) 1021
Hin1I GRCGYC 1 cut(s) 1032
Hin1II CATG 7 cut(s) 96, 353, 493, 505, 793, 812, 980
HincII GTYRAC 1 cut(s) 647
HindII GTYRAC 1 cut(s) 647
HinfI GANTC 5 cut(s) 397, 828, 834, 1090, 1126
HpaII CCGG 1 cut(s) 200
HphI GGTGA 4 cut(s) 214, 675, 872, 899
Hpy166II GTNNAC 5 cut(s) 116, 430, 647, 867, 1036
Hpy188I TCNGA 7 cut(s) 7, 147, 166, 448, 833, 1095, 1119
Hpy188III TCNNGA 5 cut(s) 136, 350, 809, 945, 977
Hpy8I GTNNAC 5 cut(s) 116, 430, 647, 867, 1036
Hpy99I CGWCG 1 cut(s) 1046
HpyAV CCTTC 4 cut(s) 380, 576, 777, 989
HpyCH4III ACNGT 3 cut(s) 539, 571, 610
HpyCH4IV ACGT 3 cut(s) 295, 891, 1041
HpyCH4V TGCA 9 cut(s) 87, 107, 170, 389, 477, 735, 789, 867, 963
HpyF10VI GCNNNNNNNGC 1 cut(s) 84
HpyF3I CTNAG 1 cut(s) 672
HpySE526I ACGT 3 cut(s) 295, 891, 1041
Hsp92I GRCGYC 1 cut(s) 1032
Hsp92II CATG 7 cut(s) 96, 353, 493, 505, 793, 812, 980
Ksp22I TGATCA 1 cut(s) 979
Kzo9I GATC 5 cut(s) 346, 451, 774, 805, 979
LmnI GCTCC 1 cut(s) 1016
LpnPI CCDG 8 cut(s) 41, 73, 213, 399, 570, 699, 890, 1071
Lsp1109I GCAGC 1 cut(s) 91
LweI GCATC 2 cut(s) 157, 1072
MaeI CTAG 1 cut(s) 380
MaeII ACGT 3 cut(s) 295, 891, 1041
MaeIII GTNAC 6 cut(s) 133, 202, 303, 604, 681, 887
MalI GATC 5 cut(s) 348, 453, 776, 807, 981
MboI GATC 5 cut(s) 346, 451, 774, 805, 979
MboII GAAGA 8 cut(s) 153, 252, 252, 354, 461, 626, 886, 909
MfeI CAATTG 1 cut(s) 227
MflI RGATCY 1 cut(s) 451
MhlI GDGCHC 1 cut(s) 869
MlyI GAGTC 2 cut(s) 843, 1084
MmeI TCCRAC 1 cut(s) 313
MnlI CCTC 8 cut(s) 329, 384, 414, 417, 992, 1039, 1047, 1125
MseI TTAA 4 cut(s) 35, 219, 275, 528
MslI CAYNNNNRTG 2 cut(s) 482, 1080
MspI CCGG 1 cut(s) 200
MunI CAATTG 1 cut(s) 227
MvnI CGCG 1 cut(s) 17
MwoI GCNNNNNNNGC 1 cut(s) 84
NdeII GATC 5 cut(s) 346, 451, 774, 805, 979
NlaIII CATG 7 cut(s) 96, 353, 493, 505, 793, 812, 980
NmuCI GTSAC 5 cut(s) 133, 202, 303, 681, 887
NspI RCATGY 1 cut(s) 505
NspV TTCGAA 1 cut(s) 781
PagI TCATGA 3 cut(s) 349, 808, 976
PceI AGGCCT 1 cut(s) 1002
PciI ACATGT 1 cut(s) 501
PcsI WCGNNNNNNNCGW 1 cut(s) 143
PfeI GAWTC 3 cut(s) 397, 828, 1126
PkrI GCNGC 2 cut(s) 16, 106
PleI GAGTC 2 cut(s) 842, 1084
PpsI GAGTC 2 cut(s) 842, 1084
PscI ACATGT 1 cut(s) 501
PshAI GACNNNNGTC 1 cut(s) 551
PsiI TTATAA 1 cut(s) 1140
PspEI GGTNACC 1 cut(s) 202
PspFI CCCAGC 1 cut(s) 1085
PspPI GGNCC 4 cut(s) 12, 383, 793, 1007
PstI CTGCAG 1 cut(s) 391
PsuI RGATCY 1 cut(s) 451
RsaI GTAC 2 cut(s) 506, 1113
RsaNI GTAC 2 cut(s) 505, 1112
RseI CAYNNNNRTG 2 cut(s) 482, 1080
SaqAI TTAA 4 cut(s) 35, 219, 275, 528
SatI GCNGC 2 cut(s) 15, 105
Sau3AI GATC 5 cut(s) 346, 451, 774, 805, 979
Sau96I GGNCC 4 cut(s) 12, 383, 793, 1007
SchI GAGTC 2 cut(s) 843, 1084
SduI GDGCHC 1 cut(s) 869
SfaNI GCATC 2 cut(s) 157, 1072
SfcI CTRYAG 1 cut(s) 387
SfuI TTCGAA 1 cut(s) 781
SinI GGWCC 2 cut(s) 793, 1007
SmiMI CAYNNNNRTG 2 cut(s) 482, 1080
SseBI AGGCCT 1 cut(s) 1002
SsiI CCGC 3 cut(s) 15, 377, 705
SspMI CTAG 1 cut(s) 380
StuI AGGCCT 1 cut(s) 1002
StyI CCWWGG 1 cut(s) 1003
TaaI ACNGT 3 cut(s) 539, 571, 610
TaiI ACGT 3 cut(s) 298, 894, 1044
TaqI TCGA 5 cut(s) 523, 717, 781, 952, 1044
TaqII GACCGA 2 cut(s) 221, 1121
TatI WGTACW 1 cut(s) 504
TauI GCSGC 1 cut(s) 17
TfiI GAWTC 3 cut(s) 397, 828, 1126
Tru1I TTAA 4 cut(s) 35, 219, 275, 528
Tru9I TTAA 4 cut(s) 35, 219, 275, 528
TscAI CASTG 1 cut(s) 312
TseFI GTSAC 5 cut(s) 133, 202, 303, 681, 887
TseI GCWGC 1 cut(s) 104
Tsp45I GTSAC 5 cut(s) 133, 202, 303, 681, 887
TspDTI ATGAA 3 cut(s) 366, 961, 965
TspGWI ACGGA 5 cut(s) 578, 632, 884, 1059, 1092
TspRI CASTG 1 cut(s) 312
VneI GTGCAC 1 cut(s) 865
VpaK11BI GGWCC 2 cut(s) 793, 1007
XagI CCTNNNNNAGG 1 cut(s) 378
XapI RAATTY 2 cut(s) 37, 71
XceI RCATGY 1 cut(s) 505
XcmI CCANNNNNNNNNTGG 1 cut(s) 1082
XmiI GTMKAC 3 cut(s) 115, 429, 1035
XspI CTAG 1 cut(s) 380
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.