FvH4_1g04440

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000064
Physical Location & Seq
Reverse (-)
2366599 .. 2367786
1188 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g04440.t1

Sequence Viewer

Length: 1188 bp
ATGTTGCGAAACAAGACTCATGGCGGATGTGATTCTGCATGCTCTGATGGTTCTAAATGGAAAGATGTTCTTATAGAAGTTGCGTTCTCTGTGTTGGAAAAGCTCTTGGAACCTCTTGATCATGTTCGTTTCGCTACCGTGTGTGAACGATGGAGTTCAATTGCAAAAGATTACAATCATACAACTCAGCGTTGGCGTTGTAAGCAAGTACTTCCCATGCTCATCATCCCTCCTAGCAGTGCTGCACAATCCCAAGGAGCATTATTGTACAGCGTTTCTGAAAGAATAATGTATAACAACATTAGGTTACCAGTGCCTCCAGATGAAAAGTACTGTGGCTTTGGCTATGGTTGGTTCGCCTCCATAGACGAATCTCTGACCAACATAACTCTTAGAAAGTTCTCTGCATACCGGAACCGCCGACGGAATGTCATTCATCTTCCTCCTCTAGCCCTTCATGACTTGACTGACGAATATAACGAAACCAAATCTCTCCCAAAGGTTATATTGTCTGCCGATCCCACTTTACATCCGGACACTTATGCGGTCTTAGCAATTTTCTGTCATAGTCACAGAGCAGCTTACATTGCAAGACAACGAGATCATTGGATCAAACTGTGGCCTAGTAATAAAGGTTATCCCACGTATTTTCATGCTATATTTTATAGAAACTATGGCTACCTAGTCAATAGCTGGGGAAATACTCTGGTGAGATTCAATGCTGATAGATATTTTTTACAAAGTTTTTTAGAAAGAGTGAACACACAACCTCAAATCAGTCCTAAAAGTGGTACATATATTGTTGAATCAACCAACGGAAACCTATTGCTTGTTGAAAGAGTCTCTCTCCGTAAGGAAGTGTCTGCTACAAGCTTCAAAGTTTCCCTAGTGGTAGAGAAAGAAAATTCTGAATCCATACGTGGTGTTGACGCACAACTACATGAGGTGAATAGCATTGGAGATGAAGCTCTGTTTGTATGTGAGAGTCATTCGATGTCTGTTTTGGCTTCGAATTTTCGTGGATGCCAGCCTAATTCTATCTACTACAATTATAATAGTGGCTCAACATGGGAGATGGGTATCTTCAGTTTAGAGAACAAAACCACCACGCGACTTTACTCTCTGAATCATTGCGAATCGGACTATATGCCATTTTGGATCACACCACCGCTTGAAGGACTCTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295 F-box F-box-like

Protein Analysis

396

Amino Acids

45.24

Weight (kDa)

7.98

Isoelectric Point (pI)

41.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_KIB1-4 PF03478 89 - 362 1.1e-32 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000064)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04090 FvH4_1g04091 FvH4_1g04110 FvH4_1g04440 FvH4_1g05330 FvH4_1g05332 FvH4_1g05560 FvH4_1g05580 FvH4_1g05590 FvH4_1g05611 FvH4_1g05892 FvH4_1g05900 FvH4_1g06763 FvH4_1g17860 FvH4_1g17860 FvH4_1g17861 FvH4_1g17880 FvH4_1g17902 FvH4_2g08142 FvH4_2g25110 FvH4_2g34380 FvH4_3g19131 FvH4_3g20501 FvH4_4g02770 FvH4_4g02771 FvH4_4g17610 FvH4_4g26951 FvH4_4g28330 FvH4_4g29110 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29690 FvH4_4g29691 FvH4_4g30221 FvH4_4g30230 FvH4_4g30240 FvH4_4g30602 FvH4_4g30610 FvH4_6g01351 FvH4_6g01780 FvH4_6g01890 FvH4_6g47150 FvH4_6g52260 FvH4_6g52703 FvH4_7g23210 FvH4_7g23240 FvH4_7g23350 FvH4_7g28790 FvH4_7g28820 FvH4_7g28830 FvH4_7g28840 FvH4_7g28890 FvH4_7g29040 FvH4_7g29050 FvH4_7g29990 FvH4_7g33871 FvH4_c6g00090
malus_domestica MD01G1180800.v1.1 MD01G1199400.v1.1 MD02G1310000.v1.1 MD04G1097400.v1.1 MD07G1264800.v1.1 MD07G1264900.v1.1 MD07G1270200.v1.1 MD07G1270300.v1.1 MD07G1270500.v1.1 MD10G1043600.v1.1 MD13G1047500.v1.1 MD13G1075200.v1.1
prunus_persica Prupe.1G009400_v2.0.a1 Prupe.1G076100_v2.0.a1 Prupe.1G158300_v2.0.a1 Prupe.1G208900_v2.0.a1 Prupe.1G273900_v2.0.a1 Prupe.2G253900_v2.0.a1 Prupe.2G255700_v2.0.a1 Prupe.2G256000_v2.0.a1 Prupe.2G280300_v2.0.a1 Prupe.2G290700_v2.0.a1 Prupe.3G068500_v2.0.a1 Prupe.4G112800_v2.0.a1 Prupe.5G168600_v2.0.a1 Prupe.5G168800_v2.0.a1 Prupe.5G169100_v2.0.a1 Prupe.8G049800_v2.0.a1
pyrus_communis pycom01g19330 pycom01g20930 pycom01g22010 pycom01g22020 pycom02g26090 pycom07g24330 pycom07g24720 pycom13g04150 pycom420g01320
rosa_chinensis RchiOBHm_Chr1g0324121 RchiOBHm_Chr1g0324251 RchiOBHm_Chr1g0343741 RchiOBHm_Chr1g0355031 RchiOBHm_Chr1g0359461 RchiOBHm_Chr1g0376351 RchiOBHm_Chr1g0376381 RchiOBHm_Chr2g0092531 RchiOBHm_Chr2g0108311 RchiOBHm_Chr2g0108321 RchiOBHm_Chr2g0108331 RchiOBHm_Chr2g0133991 RchiOBHm_Chr2g0156691 RchiOBHm_Chr2g0173801 RchiOBHm_Chr3g0449701 RchiOBHm_Chr3g0449861 RchiOBHm_Chr4g0417201 RchiOBHm_Chr4g0417931 RchiOBHm_Chr4g0424551 RchiOBHm_Chr4g0442921 RchiOBHm_Chr4g0442931 RchiOBHm_Chr5g0032171 RchiOBHm_Chr5g0032191 RchiOBHm_Chr5g0032221 RchiOBHm_Chr6g0258051 RchiOBHm_Chr6g0277851 RchiOBHm_Chr6g0291671 RchiOBHm_Chr6g0291691 RchiOBHm_Chr6g0312761 RchiOBHm_Chr7g0223801 RchiOBHm_Chr7g0224141
rosa_laevigata RLG00000001917 RLG00000001951 RLG00000005804 RLG00000006309 RLG00000006344 RLG00000006458 RLG00000016168 RLG00000016259 RLG00000016305 RLG00000016306 RLG00000019810 RLG00000022223 RLG00000026077 RLG00000026607 RLG00000029703 RLG00000033364 RLG00000034633 RLG00000034637
rosa_multiflora Rmu_co8010764.1_g000001 Rmu_co8262143.1_g000001 Rmu_co8346175.1_g000001 Rmu_sc0000096.1_g000016 Rmu_sc0000544.1_g000003 Rmu_sc0000591.1_g000007 Rmu_sc0000756.1_g000029 Rmu_sc0000841.1_g000017 Rmu_sc0000907.1_g000020 Rmu_sc0000954.1_g000004 Rmu_sc0001195.1_g000007 Rmu_sc0001198.1_g000008 Rmu_sc0001201.1_g000011 Rmu_sc0001201.1_g000013 Rmu_sc0001782.1_g000035 Rmu_sc0001904.1_g000004 Rmu_sc0001962.1_g000039 Rmu_sc0002113.1_g000021 Rmu_sc0002226.1_g000017 Rmu_sc0002226.1_g000020 Rmu_sc0002327.1_g000005 Rmu_sc0002372.1_g000010 Rmu_sc0002372.1_g000014 Rmu_sc0002687.1_g000005 Rmu_sc0003031.1_g000019 Rmu_sc0003076.1_g000014 Rmu_sc0004296.1_g000009 Rmu_sc0004540.1_g000009 Rmu_sc0005369.1_g000002 Rmu_sc0005375.1_g000003 Rmu_sc0005375.1_g000013 Rmu_sc0005742.1_g000008 Rmu_sc0005742.1_g000015 Rmu_sc0005742.1_g000021 Rmu_sc0007419.1_g000011 Rmu_sc0008909.1_g000008 Rmu_sc0010556.1_g000018 Rmu_sc0010999.1_g000008 Rmu_sc0017510.1_g000003 Rmu_sc0017556.1_g000001 Rmu_sc0017900.1_g000007 Rmu_sc0024249.1_g000001 Rmu_sc0032377.1_g000001 Rmu_sc0033569.1_g000001 Rmu_sc0036457.1_g000001 Rmu_sc0041304.1_g000001 Rmu_ssc0000204.1_g000011 Rmu_ssc0000438.1_g000056
rosa_roxburghii Rroxscaffold_1G00048250 Rroxscaffold_1G00048290 Rroxscaffold_2G00092800 Rroxscaffold_2G00110580 Rroxscaffold_2G00135240 Rroxscaffold_2G00135260 Rroxscaffold_2G00135300 Rroxscaffold_2G00149010 Rroxscaffold_2G00149160 Rroxscaffold_2G00149170 Rroxscaffold_2G00149630 Rroxscaffold_2G00151760 Rroxscaffold_2G00151790 Rroxscaffold_2G00152170 Rroxscaffold_3G00225510 Rroxscaffold_3G00249210 Rroxscaffold_4G00277020 Rroxscaffold_4G00281760 Rroxscaffold_4G00281770 Rroxscaffold_4G00281810 Rroxscaffold_4G00281820 Rroxscaffold_4G00282160 Rroxscaffold_4G00310340 Rroxscaffold_5G00361040 Rroxscaffold_5G00363770 Rroxscaffold_5G00366460 Rroxscaffold_5G00378270 Rroxscaffold_5G00378310 Rroxscaffold_5G00379550 Rroxscaffold_5G00379650 Rroxscaffold_6G00422110 Rroxscaffold_6G00427680 Rroxscaffold_7G00175850 Rroxscaffold_7G00175860 Rroxscaffold_7G00190720 Rroxscaffold_7G00190750 Rroxscaffold_7G00190830 Rroxscaffold_7G00196820
rosa_rugosa Rorug01G0395900 Rorug01G0444400 Rorug01G0488100 Rorug02G0001700 Rorug02G0021600 Rorug02G0025700 Rorug02G0152200 Rorug02G0271300 Rorug02G0455800 Rorug02G0572800 Rorug02G0576000 Rorug04G0146300 Rorug04G0172200 Rorug04G0172400 Rorug04G0311300 Rorug04G0312200 Rorug04G0312300 Rorug05G0129500 Rorug05G0129700 Rorug05G0250600 Rorug06G0112600 Rorug06G0220700 Rorug06G0220800 Rorug07G0114600
rosa_samantha Rh1DG066700 Rh1DG081800 Rh1DG184300 Rh1DG401900 Rh1DG402700 Rh1DG407000 Rh1DG407600 Rh2AG200800 Rh2AG201000 Rh2AG521000 Rh2BG066200 Rh2BG066300 Rh2BG073900 Rh2BG373500 Rh2BG417600 Rh2BG662600 Rh2DG066200 Rh2DG072000 Rh2DG390000 Rh2DG677700 Rh3CG020200 Rh3CG021500 Rh3CG081200 Rh4AG209600 Rh4AG362600 Rh4AG362700 Rh4AG397200 Rh4BG209800 Rh4BG209900 Rh4BG210000 Rh4CG220800 Rh4CG271300 Rh4CG388000 Rh4DG029800 Rh4DG368700 Rh4DG403900 Rh5AG035900 Rh5BG034600 Rh5BG034900 Rh5DG228700 Rh5DG228800 Rh6AG355900 Rh6CG083600 Rh6CG229000 Rh6CG229100 Rh6CG229700 Rh6CG346500 Rh6CG346600 Rh7AG362300 Rh7AG362400 Rh7AG363200 Rh7AG365100 Rh7CG380900 Rh7CG381000 Rh7CG381600 Rh7DG437600
rosa_wichuraiana Rw0G004580 Rw0G004590 Rw0G005750 Rw0G006640 Rw0G007050 Rw0G008040 Rw0G012200 Rw0G013750 Rw0G016590 Rw1G006090 Rw1G012040 Rw1G036130 Rw1G036270 Rw1G036290 Rw1G036420 Rw1G036430 Rw1G036590 Rw2G003560 Rw2G005130 Rw2G005980 Rw2G006090 Rw2G015980 Rw2G016000 Rw2G043010 Rw2G053520 Rw4G018760 Rw4G022000 Rw4G034250 Rw5G003280 Rw5G020380 Rw5G020390 Rw6G008210 Rw6G031000 Rw7G030830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1053
AccII CGCG 1 cut(s) 1111
AccIII TCCGGA 1 cut(s) 532
AciI CCGC 4 cut(s) 24, 418, 545, 1169
AclWI GGATC 3 cut(s) 512, 617, 1166
AcsI RAATTY 2 cut(s) 904, 1012
AcuI CTGAAG 1 cut(s) 1069
AfaI GTAC 4 cut(s) 210, 269, 332, 793
AfiI CCNNNNNNNGG 2 cut(s) 788, 1175
AgsI TTSAA 6 cut(s) 159, 718, 806, 836, 877, 1175
AhdI GACNNNNNGTC 1 cut(s) 428
AluBI AGCT 5 cut(s) 103, 581, 693, 873, 968
AluI AGCT 5 cut(s) 103, 581, 693, 873, 968
Alw26I GTCTC 1 cut(s) 847
AlwI GGATC 3 cut(s) 512, 617, 1166
Aor13HI TCCGGA 1 cut(s) 532
AoxI GGCC 1 cut(s) 620
ApeKI GCWGC 2 cut(s) 242, 578
ApoI RAATTY 2 cut(s) 904, 1012
AsuHPI GGTGA 2 cut(s) 721, 958
AsuII TTCGAA 1 cut(s) 1010
BbvI GCAGC 2 cut(s) 229, 590
BccI CCATC 3 cut(s) 41, 144, 1069
BclI TGATCA 1 cut(s) 118
BcoDI GTCTC 1 cut(s) 847
BfaI CTAG 5 cut(s) 234, 449, 624, 683, 887
BisI GCNGC 2 cut(s) 243, 579
BlsI GCNGC 2 cut(s) 244, 580
BmcAI AGTACT 2 cut(s) 210, 332
BmeRI GACNNNNNGTC 1 cut(s) 428
BmiI GGNNCC 2 cut(s) 111, 416
BmsI GCATC 1 cut(s) 1013
BplI GAGNNNNNCTC 2 cut(s) 831, 863
BpmI CTGGAG 1 cut(s) 303
Bpu14I TTCGAA 1 cut(s) 1010
BsaAI YACGTR 2 cut(s) 645, 920
BsaBI GATNNNNATC 2 cut(s) 174, 1079
BsaJI CCNNGG 1 cut(s) 253
BsaWI WCCGGW 2 cut(s) 411, 532
Bsc4I CCNNNNNNNGG 2 cut(s) 788, 1175
Bse1I ACTGG 1 cut(s) 311
Bse3DI GCAATG 2 cut(s) 585, 1129
Bse8I GATNNNNATC 2 cut(s) 174, 1079
BseAI TCCGGA 1 cut(s) 532
BseDI CCNNGG 1 cut(s) 253
BseGI GGATG 4 cut(s) 32, 225, 529, 1028
BseJI GATNNNNATC 2 cut(s) 174, 1079
BseLI CCNNNNNNNGG 2 cut(s) 788, 1175
BseMI GCAATG 2 cut(s) 585, 1129
BseMII CTCAG 1 cut(s) 200
BseNI ACTGG 1 cut(s) 311
BseRI GAGGAG 1 cut(s) 435
BseXI GCAGC 2 cut(s) 229, 590
BseYI CCCAGC 1 cut(s) 693
BsgI GTGCAG 1 cut(s) 228
Bsh1236I CGCG 1 cut(s) 1111
BshFI GGCC 1 cut(s) 622
BsiSI CCGG 2 cut(s) 412, 533
BslI CCNNNNNNNGG 2 cut(s) 788, 1175
BsmAI GTCTC 1 cut(s) 847
BsnI GGCC 1 cut(s) 622
Bsp119I TTCGAA 1 cut(s) 1010
Bsp13I TCCGGA 1 cut(s) 532
Bsp1407I TGTACA 1 cut(s) 267
Bsp143I GATC 5 cut(s) 118, 517, 601, 609, 1158
BspACI CCGC 4 cut(s) 24, 418, 545, 1169
BspANI GGCC 1 cut(s) 622
BspCNI CTCAG 1 cut(s) 199
BspEI TCCGGA 1 cut(s) 532
BspFNI CGCG 1 cut(s) 1111
BspHI TCATGA 1 cut(s) 457
BspLI GGNNCC 2 cut(s) 111, 416
BspPI GGATC 3 cut(s) 512, 617, 1166
BspT104I TTCGAA 1 cut(s) 1010
BsrDI GCAATG 2 cut(s) 585, 1129
BsrGI TGTACA 1 cut(s) 267
BsrI ACTGG 1 cut(s) 311
BssECI CCNNGG 1 cut(s) 253
BssMI GATC 5 cut(s) 118, 517, 601, 609, 1158
BssT1I CCWWGG 1 cut(s) 253
Bst4CI ACNGT 3 cut(s) 139, 335, 618
BstAUI TGTACA 1 cut(s) 267
BstBAI YACGTR 2 cut(s) 645, 920
BstBI TTCGAA 1 cut(s) 1010
BstC8I GCNNGC 2 cut(s) 40, 1028
BstDEI CTNAG 3 cut(s) 186, 392, 550
BstEII GGTNACC 1 cut(s) 306
BstF5I GGATG 4 cut(s) 32, 225, 529, 1028
BstFNI CGCG 1 cut(s) 1111
BstKTI GATC 5 cut(s) 121, 520, 604, 612, 1161
BstMAI GTCTC 1 cut(s) 847
BstMBI GATC 5 cut(s) 118, 517, 601, 609, 1158
BstMWI GCNNNNNNNGC 3 cut(s) 202, 551, 587
BstNSI RCATGY 1 cut(s) 42
BstPI GGTNACC 1 cut(s) 306
BstUI CGCG 1 cut(s) 1111
BstV1I GCAGC 2 cut(s) 229, 590
BsuRI GGCC 1 cut(s) 622
BtsCI GGATG 4 cut(s) 32, 225, 529, 1028
BtsI GCAGTG 1 cut(s) 244
BtsIMutI CAGTG 2 cut(s) 244, 318
Cac8I GCNNGC 2 cut(s) 40, 1028
CciI TCATGA 1 cut(s) 457
CseI GACGC 1 cut(s) 938
Csp6I GTAC 4 cut(s) 209, 268, 331, 792
CviAII CATG 8 cut(s) 20, 39, 122, 217, 458, 653, 941, 1068
CviQI GTAC 4 cut(s) 209, 268, 331, 792
DdeI CTNAG 3 cut(s) 186, 392, 550
DpnI GATC 5 cut(s) 120, 519, 603, 611, 1160
DpnII GATC 5 cut(s) 118, 517, 601, 609, 1158
DriI GACNNNNNGTC 1 cut(s) 428
Eam1105I GACNNNNNGTC 1 cut(s) 428
EciI GGCGGA 1 cut(s) 39
Eco130I CCWWGG 1 cut(s) 253
Eco57I CTGAAG 1 cut(s) 1069
Eco91I GGTNACC 1 cut(s) 306
EcoO65I GGTNACC 1 cut(s) 306
EcoT14I CCWWGG 1 cut(s) 253
ErhI CCWWGG 1 cut(s) 253
FaeI CATG 8 cut(s) 23, 42, 125, 220, 461, 656, 944, 1071
FalI AAGNNNNNCTT 2 cut(s) 54, 86
FatI CATG 8 cut(s) 19, 38, 121, 216, 457, 652, 940, 1067
FbaI TGATCA 1 cut(s) 118
Fnu4HI GCNGC 2 cut(s) 243, 579
FokI GGATG 4 cut(s) 39, 212, 516, 1035
Fsp4HI GCNGC 2 cut(s) 243, 579
FspBI CTAG 5 cut(s) 234, 449, 624, 683, 887
GluI GCNGC 2 cut(s) 243, 579
GsaI CCCAGC 1 cut(s) 697
GsuI CTGGAG 1 cut(s) 303
HaeIII GGCC 1 cut(s) 622
HapII CCGG 2 cut(s) 412, 533
HgaI GACGC 1 cut(s) 938
Hin1II CATG 8 cut(s) 23, 42, 125, 220, 461, 656, 944, 1071
HincII GTYRAC 1 cut(s) 928
HindII GTYRAC 1 cut(s) 928
HindIII AAGCTT 1 cut(s) 871
HpaII CCGG 2 cut(s) 412, 533
HphI GGTGA 2 cut(s) 721, 958
Hpy166II GTNNAC 3 cut(s) 146, 760, 928
Hpy188I TCNGA 6 cut(s) 46, 280, 378, 910, 1125, 1141
Hpy188III TCNNGA 4 cut(s) 116, 320, 458, 533
Hpy8I GTNNAC 3 cut(s) 146, 760, 928
Hpy99I CGWCG 1 cut(s) 426
HpyAV CCTTC 2 cut(s) 464, 1169
HpyCH4III ACNGT 3 cut(s) 139, 335, 618
HpyCH4IV ACGT 2 cut(s) 644, 919
HpyCH4V TGCA 5 cut(s) 38, 164, 245, 407, 590
HpyF10VI GCNNNNNNNGC 3 cut(s) 202, 551, 587
HpyF3I CTNAG 3 cut(s) 186, 392, 550
HpySE526I ACGT 2 cut(s) 644, 919
Hsp92II CATG 8 cut(s) 23, 42, 125, 220, 461, 656, 944, 1071
Kpn2I TCCGGA 1 cut(s) 532
Ksp22I TGATCA 1 cut(s) 118
Kzo9I GATC 5 cut(s) 118, 517, 601, 609, 1158
LmnI GCTCC 1 cut(s) 257
LpnPI CCDG 7 cut(s) 324, 333, 425, 546, 679, 692, 1040
Lsp1109I GCAGC 2 cut(s) 229, 590
LweI GCATC 1 cut(s) 1013
MaeI CTAG 5 cut(s) 234, 449, 624, 683, 887
MaeII ACGT 2 cut(s) 644, 919
MaeIII GTNAC 2 cut(s) 306, 569
MalI GATC 5 cut(s) 120, 519, 603, 611, 1160
MboI GATC 5 cut(s) 118, 517, 601, 609, 1158
MboII GAAGA 2 cut(s) 431, 1075
MfeI CAATTG 1 cut(s) 159
MluCI AATT 6 cut(s) 159, 555, 904, 1012, 1033, 1048
MlyI GAGTC 4 cut(s) 10, 849, 994, 1173
MmeI TCCRAC 1 cut(s) 75
MnlI CCTC 8 cut(s) 123, 240, 327, 370, 453, 456, 780, 937
MroI TCCGGA 1 cut(s) 532
MspI CCGG 2 cut(s) 412, 533
MunI CAATTG 1 cut(s) 159
MvnI CGCG 1 cut(s) 1111
MwoI GCNNNNNNNGC 3 cut(s) 202, 551, 587
NdeII GATC 5 cut(s) 118, 517, 601, 609, 1158
NlaIII CATG 8 cut(s) 23, 42, 125, 220, 461, 656, 944, 1071
NlaIV GGNNCC 2 cut(s) 111, 416
NmuCI GTSAC 1 cut(s) 569
NspI RCATGY 1 cut(s) 42
NspV TTCGAA 1 cut(s) 1010
PaeI GCATGC 1 cut(s) 42
PagI TCATGA 1 cut(s) 457
PcsI WCGNNNNNNNCGW 1 cut(s) 477
PfeI GAWTC 7 cut(s) 32, 371, 714, 806, 911, 1126, 1136
PkrI GCNGC 2 cut(s) 244, 580
PleI GAGTC 4 cut(s) 10, 848, 993, 1173
PpsI GAGTC 4 cut(s) 10, 848, 993, 1173
Ppu21I YACGTR 2 cut(s) 645, 920
PsiI TTATAA 1 cut(s) 1053
PspEI GGTNACC 1 cut(s) 306
PspFI CCCAGC 1 cut(s) 693
PspN4I GGNNCC 2 cut(s) 111, 416
RsaI GTAC 4 cut(s) 210, 269, 332, 793
RsaNI GTAC 4 cut(s) 209, 268, 331, 792
SatI GCNGC 2 cut(s) 243, 579
Sau3AI GATC 5 cut(s) 118, 517, 601, 609, 1158
ScaI AGTACT 2 cut(s) 210, 332
SchI GAGTC 4 cut(s) 10, 849, 994, 1173
SfaNI GCATC 1 cut(s) 1013
SfuI TTCGAA 1 cut(s) 1010
SphI GCATGC 1 cut(s) 42
Sse9I AATT 6 cut(s) 159, 555, 904, 1012, 1033, 1048
SsiI CCGC 4 cut(s) 24, 418, 545, 1169
SspMI CTAG 5 cut(s) 234, 449, 624, 683, 887
StyI CCWWGG 1 cut(s) 253
TaaI ACNGT 3 cut(s) 139, 335, 618
TaiI ACGT 2 cut(s) 647, 922
TaqI TCGA 2 cut(s) 992, 1010
TasI AATT 6 cut(s) 159, 555, 904, 1012, 1033, 1048
TatI WGTACW 3 cut(s) 208, 267, 330
TfiI GAWTC 7 cut(s) 32, 371, 714, 806, 911, 1126, 1136
TscAI CASTG 2 cut(s) 244, 318
TseFI GTSAC 1 cut(s) 569
TseI GCWGC 2 cut(s) 242, 578
Tsp45I GTSAC 1 cut(s) 569
TspDTI ATGAA 5 cut(s) 339, 425, 446, 641, 978
TspGWI ACGGA 3 cut(s) 439, 831, 839
TspRI CASTG 2 cut(s) 244, 318
XapI RAATTY 2 cut(s) 904, 1012
XceI RCATGY 1 cut(s) 42
XspI CTAG 5 cut(s) 234, 449, 624, 683, 887
ZrmI AGTACT 2 cut(s) 210, 332
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.