MD02G1310000.v1.1

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
OG0000064
Physical Location & Seq
Forward (+)
36571440 .. 36572843
1404 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1310000.v1.1.491

Sequence Viewer

Length: 1092 bp
ATGGATTCAGATTGGAAAAATTTGCCTAACCACCTTCTGGATTTAGTGTTAGAGAAACTTGCATCGGATGACTTTTTGAGATTCAGTCTTGTTTGTATGTCATGGAGTAGTGTAACAAAGGATAATCCTCGACGGCCAGCCCCAATGCTCTTAGTTCCCAGTGGTGGCAAACAGGATACATGGAATGTATACAACGTCGAGAAGGATAAGGTTTCTGATTTACAATTAAGGTTGCCGAACAAACGATTTTGTGGGTCTTCAAAAGGATGGCTTGTAACCGTCGATGAAACTTTCGCGGTGACCTTAATGAATCCGTTCGCAAGGATTCAAGGATGTGAAGAGAATGAAAATTCAATCATTCGCCTTCCTTCACTGATGCCTCCTTGTCCTACACGCACTATGTACTGGGCTCGACGATACGACCGTTATGTTCACAAGGCTACCATTTCAGCAGATCCGGTTTTAAATGCAGATGAATGTATTGTTGAGGTCATATTCGGGGATGGTTATCTATTGGCTTCTGTTAGACCTGGTAAAGATAAAACTTGGACCTATCGTGAACATAGGAAGTGGCACTTCATTGATGATGTTGTTCATGTTGGAGGTAAAGTTTACTGCGTCGATAGGTCTGATAGACTTAACCTAGATGGGAAAATTATTGAAGAACGTATAGTTCGCAAGAGATATCTCGTGGATCTCAACGAGAAAGAAGTTTTAATGGTGAAAAGGTGCTTCAGGATGGAAAAAAAAGAAGGGAACAGACACCCCAGCTTTGTGACACAAAAATTTGAAATTTTTAGATGGAACTTTGAAGAAAGTAAGTGGATCGAGATGACAAGTTTGGGTGATGTTGCTCTCTTTGTGGGGGCAAACGATTCGGCATCTGTTTTGACCTCAAAGTTACCAGGATGTCAGCCGGATTGCATATACTTCAACTCAGATTGGCATTGTGTAGAATGGAATCGCCAAGACTATGGTGTGTATAACTTAAAGACTCAAAGCATTTCAAAGCCTTACGCTCCACATGCATTGACACTACTGAATATGGCCAAGCAAAAATCAATCTGGTTTCTGCCTACTCTTCGGTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295 F-box F-box-like

Protein Analysis

364

Amino Acids

42.2

Weight (kDa)

8.57

Isoelectric Point (pI)

41.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 5 - 43 5.8e-06 F-box domain
Beta-prop_KIB1-4 PF03478 64 - 329 3.4e-44 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000064)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04090 FvH4_1g04091 FvH4_1g04110 FvH4_1g04440 FvH4_1g05330 FvH4_1g05332 FvH4_1g05560 FvH4_1g05580 FvH4_1g05590 FvH4_1g05611 FvH4_1g05892 FvH4_1g05900 FvH4_1g06763 FvH4_1g17860 FvH4_1g17860 FvH4_1g17861 FvH4_1g17880 FvH4_1g17902 FvH4_2g08142 FvH4_2g25110 FvH4_2g34380 FvH4_3g19131 FvH4_3g20501 FvH4_4g02770 FvH4_4g02771 FvH4_4g17610 FvH4_4g26951 FvH4_4g28330 FvH4_4g29110 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29690 FvH4_4g29691 FvH4_4g30221 FvH4_4g30230 FvH4_4g30240 FvH4_4g30602 FvH4_4g30610 FvH4_6g01351 FvH4_6g01780 FvH4_6g01890 FvH4_6g47150 FvH4_6g52260 FvH4_6g52703 FvH4_7g23210 FvH4_7g23240 FvH4_7g23350 FvH4_7g28790 FvH4_7g28820 FvH4_7g28830 FvH4_7g28840 FvH4_7g28890 FvH4_7g29040 FvH4_7g29050 FvH4_7g29990 FvH4_7g33871 FvH4_c6g00090
malus_domestica MD01G1180800.v1.1 MD01G1199400.v1.1 MD02G1310000.v1.1 MD04G1097400.v1.1 MD07G1264800.v1.1 MD07G1264900.v1.1 MD07G1270200.v1.1 MD07G1270300.v1.1 MD07G1270500.v1.1 MD10G1043600.v1.1 MD13G1047500.v1.1 MD13G1075200.v1.1
prunus_persica Prupe.1G009400_v2.0.a1 Prupe.1G076100_v2.0.a1 Prupe.1G158300_v2.0.a1 Prupe.1G208900_v2.0.a1 Prupe.1G273900_v2.0.a1 Prupe.2G253900_v2.0.a1 Prupe.2G255700_v2.0.a1 Prupe.2G256000_v2.0.a1 Prupe.2G280300_v2.0.a1 Prupe.2G290700_v2.0.a1 Prupe.3G068500_v2.0.a1 Prupe.4G112800_v2.0.a1 Prupe.5G168600_v2.0.a1 Prupe.5G168800_v2.0.a1 Prupe.5G169100_v2.0.a1 Prupe.8G049800_v2.0.a1
pyrus_communis pycom01g19330 pycom01g20930 pycom01g22010 pycom01g22020 pycom02g26090 pycom07g24330 pycom07g24720 pycom13g04150 pycom420g01320
rosa_chinensis RchiOBHm_Chr1g0324121 RchiOBHm_Chr1g0324251 RchiOBHm_Chr1g0343741 RchiOBHm_Chr1g0355031 RchiOBHm_Chr1g0359461 RchiOBHm_Chr1g0376351 RchiOBHm_Chr1g0376381 RchiOBHm_Chr2g0092531 RchiOBHm_Chr2g0108311 RchiOBHm_Chr2g0108321 RchiOBHm_Chr2g0108331 RchiOBHm_Chr2g0133991 RchiOBHm_Chr2g0156691 RchiOBHm_Chr2g0173801 RchiOBHm_Chr3g0449701 RchiOBHm_Chr3g0449861 RchiOBHm_Chr4g0417201 RchiOBHm_Chr4g0417931 RchiOBHm_Chr4g0424551 RchiOBHm_Chr4g0442921 RchiOBHm_Chr4g0442931 RchiOBHm_Chr5g0032171 RchiOBHm_Chr5g0032191 RchiOBHm_Chr5g0032221 RchiOBHm_Chr6g0258051 RchiOBHm_Chr6g0277851 RchiOBHm_Chr6g0291671 RchiOBHm_Chr6g0291691 RchiOBHm_Chr6g0312761 RchiOBHm_Chr7g0223801 RchiOBHm_Chr7g0224141
rosa_laevigata RLG00000001917 RLG00000001951 RLG00000005804 RLG00000006309 RLG00000006344 RLG00000006458 RLG00000016168 RLG00000016259 RLG00000016305 RLG00000016306 RLG00000019810 RLG00000022223 RLG00000026077 RLG00000026607 RLG00000029703 RLG00000033364 RLG00000034633 RLG00000034637
rosa_multiflora Rmu_co8010764.1_g000001 Rmu_co8262143.1_g000001 Rmu_co8346175.1_g000001 Rmu_sc0000096.1_g000016 Rmu_sc0000544.1_g000003 Rmu_sc0000591.1_g000007 Rmu_sc0000756.1_g000029 Rmu_sc0000841.1_g000017 Rmu_sc0000907.1_g000020 Rmu_sc0000954.1_g000004 Rmu_sc0001195.1_g000007 Rmu_sc0001198.1_g000008 Rmu_sc0001201.1_g000011 Rmu_sc0001201.1_g000013 Rmu_sc0001782.1_g000035 Rmu_sc0001904.1_g000004 Rmu_sc0001962.1_g000039 Rmu_sc0002113.1_g000021 Rmu_sc0002226.1_g000017 Rmu_sc0002226.1_g000020 Rmu_sc0002327.1_g000005 Rmu_sc0002372.1_g000010 Rmu_sc0002372.1_g000014 Rmu_sc0002687.1_g000005 Rmu_sc0003031.1_g000019 Rmu_sc0003076.1_g000014 Rmu_sc0004296.1_g000009 Rmu_sc0004540.1_g000009 Rmu_sc0005369.1_g000002 Rmu_sc0005375.1_g000003 Rmu_sc0005375.1_g000013 Rmu_sc0005742.1_g000008 Rmu_sc0005742.1_g000015 Rmu_sc0005742.1_g000021 Rmu_sc0007419.1_g000011 Rmu_sc0008909.1_g000008 Rmu_sc0010556.1_g000018 Rmu_sc0010999.1_g000008 Rmu_sc0017510.1_g000003 Rmu_sc0017556.1_g000001 Rmu_sc0017900.1_g000007 Rmu_sc0024249.1_g000001 Rmu_sc0032377.1_g000001 Rmu_sc0033569.1_g000001 Rmu_sc0036457.1_g000001 Rmu_sc0041304.1_g000001 Rmu_ssc0000204.1_g000011 Rmu_ssc0000438.1_g000056
rosa_roxburghii Rroxscaffold_1G00048250 Rroxscaffold_1G00048290 Rroxscaffold_2G00092800 Rroxscaffold_2G00110580 Rroxscaffold_2G00135240 Rroxscaffold_2G00135260 Rroxscaffold_2G00135300 Rroxscaffold_2G00149010 Rroxscaffold_2G00149160 Rroxscaffold_2G00149170 Rroxscaffold_2G00149630 Rroxscaffold_2G00151760 Rroxscaffold_2G00151790 Rroxscaffold_2G00152170 Rroxscaffold_3G00225510 Rroxscaffold_3G00249210 Rroxscaffold_4G00277020 Rroxscaffold_4G00281760 Rroxscaffold_4G00281770 Rroxscaffold_4G00281810 Rroxscaffold_4G00281820 Rroxscaffold_4G00282160 Rroxscaffold_4G00310340 Rroxscaffold_5G00361040 Rroxscaffold_5G00363770 Rroxscaffold_5G00366460 Rroxscaffold_5G00378270 Rroxscaffold_5G00378310 Rroxscaffold_5G00379550 Rroxscaffold_5G00379650 Rroxscaffold_6G00422110 Rroxscaffold_6G00427680 Rroxscaffold_7G00175850 Rroxscaffold_7G00175860 Rroxscaffold_7G00190720 Rroxscaffold_7G00190750 Rroxscaffold_7G00190830 Rroxscaffold_7G00196820
rosa_rugosa Rorug01G0395900 Rorug01G0444400 Rorug01G0488100 Rorug02G0001700 Rorug02G0021600 Rorug02G0025700 Rorug02G0152200 Rorug02G0271300 Rorug02G0455800 Rorug02G0572800 Rorug02G0576000 Rorug04G0146300 Rorug04G0172200 Rorug04G0172400 Rorug04G0311300 Rorug04G0312200 Rorug04G0312300 Rorug05G0129500 Rorug05G0129700 Rorug05G0250600 Rorug06G0112600 Rorug06G0220700 Rorug06G0220800 Rorug07G0114600
rosa_samantha Rh1DG066700 Rh1DG081800 Rh1DG184300 Rh1DG401900 Rh1DG402700 Rh1DG407000 Rh1DG407600 Rh2AG200800 Rh2AG201000 Rh2AG521000 Rh2BG066200 Rh2BG066300 Rh2BG073900 Rh2BG373500 Rh2BG417600 Rh2BG662600 Rh2DG066200 Rh2DG072000 Rh2DG390000 Rh2DG677700 Rh3CG020200 Rh3CG021500 Rh3CG081200 Rh4AG209600 Rh4AG362600 Rh4AG362700 Rh4AG397200 Rh4BG209800 Rh4BG209900 Rh4BG210000 Rh4CG220800 Rh4CG271300 Rh4CG388000 Rh4DG029800 Rh4DG368700 Rh4DG403900 Rh5AG035900 Rh5BG034600 Rh5BG034900 Rh5DG228700 Rh5DG228800 Rh6AG355900 Rh6CG083600 Rh6CG229000 Rh6CG229100 Rh6CG229700 Rh6CG346500 Rh6CG346600 Rh7AG362300 Rh7AG362400 Rh7AG363200 Rh7AG365100 Rh7CG380900 Rh7CG381000 Rh7CG381600 Rh7DG437600
rosa_wichuraiana Rw0G004580 Rw0G004590 Rw0G005750 Rw0G006640 Rw0G007050 Rw0G008040 Rw0G012200 Rw0G013750 Rw0G016590 Rw1G006090 Rw1G012040 Rw1G036130 Rw1G036270 Rw1G036290 Rw1G036420 Rw1G036430 Rw1G036590 Rw2G003560 Rw2G005130 Rw2G005980 Rw2G006090 Rw2G015980 Rw2G016000 Rw2G043010 Rw2G053520 Rw4G018760 Rw4G022000 Rw4G034250 Rw5G003280 Rw5G020380 Rw5G020390 Rw6G008210 Rw6G031000 Rw7G030830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 37
AccI GTMKAC 1 cut(s) 189
AccII CGCG 1 cut(s) 296
AciI CCGC 1 cut(s) 296
AclWI GGATC 3 cut(s) 449, 702, 833
AcoI YGGCCR 2 cut(s) 134, 1047
AcsI RAATTY 4 cut(s) 19, 349, 785, 792
AcuI CTGAAG 1 cut(s) 718
AfaI GTAC 1 cut(s) 404
AfiI CCNNNNNNNGG 2 cut(s) 37, 164
AgsI TTSAA 8 cut(s) 261, 329, 354, 662, 791, 812, 934, 1008
AjnI CCWGG 2 cut(s) 529, 904
AluBI AGCT 1 cut(s) 771
AluI AGCT 1 cut(s) 771
AlwI GGATC 3 cut(s) 449, 702, 833
AoxI GGCC 2 cut(s) 134, 1047
ApoI RAATTY 4 cut(s) 19, 349, 785, 792
Asp700I GAANNNNTTC 1 cut(s) 314
AspS9I GGNCC 1 cut(s) 549
AsuHPI GGTGA 3 cut(s) 310, 733, 857
AvaII GGWCC 1 cut(s) 549
BaeI ACNNNNGTAYC 2 cut(s) 409, 442
BalI TGGCCA 1 cut(s) 1049
BanII GRGCYC 1 cut(s) 412
BauI CACGAG 1 cut(s) 689
BbsI GAAGAC 1 cut(s) 249
BccI CCATC 5 cut(s) 261, 497, 641, 733, 795
BceAI ACGGC 1 cut(s) 149
BcgI CGANNNNNNTGC 2 cut(s) 858, 892
BciT130I CCWGG 2 cut(s) 531, 906
BciVI GTATCC 1 cut(s) 169
BfaI CTAG 1 cut(s) 644
BfuI GTATCC 1 cut(s) 169
Bme1390I CCNGG 2 cut(s) 531, 906
Bme18I GGWCC 1 cut(s) 549
BmgT120I GGNCC 1 cut(s) 549
BmrFI CCNGG 2 cut(s) 531, 906
BmrI ACTGGG 2 cut(s) 153, 415
BmsI GCATC 3 cut(s) 71, 366, 890
BmuI ACTGGG 2 cut(s) 153, 415
BpiI GAAGAC 1 cut(s) 249
BsaBI GATNNNNATC 1 cut(s) 507
BsaWI WCCGGW 1 cut(s) 457
BsaXI ACNNNNNCTCC 2 cut(s) 594, 624
Bsc4I CCNNNNNNNGG 2 cut(s) 37, 164
Bse1I ACTGG 2 cut(s) 159, 410
Bse8I GATNNNNATC 1 cut(s) 507
BseBI CCWGG 2 cut(s) 531, 906
BseGI GGATG 6 cut(s) 73, 272, 338, 508, 744, 914
BseJI GATNNNNATC 1 cut(s) 507
BseLI CCNNNNNNNGG 2 cut(s) 37, 164
BseMII CTCAG 1 cut(s) 951
BseNI ACTGG 2 cut(s) 159, 410
BseYI CCCAGC 1 cut(s) 767
Bsh1236I CGCG 1 cut(s) 296
Bsh1285I CGRYCG 1 cut(s) 424
BshFI GGCC 2 cut(s) 136, 1049
BsiEI CGRYCG 1 cut(s) 424
BsiSI CCGG 2 cut(s) 458, 917
BslI CCNNNNNNNGG 2 cut(s) 37, 164
BsnI GGCC 2 cut(s) 136, 1049
Bsp1286I GDGCHC 1 cut(s) 412
Bsp143I GATC 3 cut(s) 454, 694, 825
BspACI CCGC 1 cut(s) 296
BspANI GGCC 2 cut(s) 136, 1049
BspCNI CTCAG 1 cut(s) 950
BspFNI CGCG 1 cut(s) 296
BspHI TCATGA 1 cut(s) 1088
BspPI GGATC 3 cut(s) 449, 702, 833
BsrI ACTGG 2 cut(s) 159, 410
BssMI GATC 3 cut(s) 454, 694, 825
BssNAI GTATAC 1 cut(s) 190
BssSI CACGAG 1 cut(s) 689
Bst1107I GTATAC 1 cut(s) 190
Bst2BI CACGAG 1 cut(s) 689
Bst2UI CCWGG 2 cut(s) 531, 906
Bst4CI ACNGT 2 cut(s) 280, 425
Bst6I CTCTTC 2 cut(s) 333, 1086
BstC8I GCNNGC 1 cut(s) 138
BstDEI CTNAG 2 cut(s) 151, 937
BstEII GGTNACC 1 cut(s) 298
BstF5I GGATG 6 cut(s) 73, 272, 338, 508, 744, 914
BstFNI CGCG 1 cut(s) 296
BstKTI GATC 3 cut(s) 457, 697, 828
BstMBI GATC 3 cut(s) 454, 694, 825
BstMCI CGRYCG 1 cut(s) 424
BstMWI GCNNNNNNNGC 1 cut(s) 1025
BstNI CCWGG 2 cut(s) 531, 906
BstNSI RCATGY 1 cut(s) 1028
BstPI GGTNACC 1 cut(s) 298
BstSCI CCNGG 2 cut(s) 529, 904
BstUI CGCG 1 cut(s) 296
BstV2I GAAGAC 1 cut(s) 249
BstX2I RGATCY 2 cut(s) 454, 694
BstXI CCANNNNNNTGG 1 cut(s) 974
BstYI RGATCY 2 cut(s) 454, 694
BstZ17I GTATAC 1 cut(s) 190
BsuI GTATCC 1 cut(s) 169
BsuRI GGCC 2 cut(s) 136, 1049
BtsCI GGATG 6 cut(s) 73, 272, 338, 508, 744, 914
BtsIMutI CAGTG 2 cut(s) 166, 371
Cac8I GCNNGC 1 cut(s) 138
CciI TCATGA 1 cut(s) 1088
Cfr13I GGNCC 1 cut(s) 549
CseI GACGC 1 cut(s) 607
CsiI ACCWGGT 1 cut(s) 529
Csp6I GTAC 1 cut(s) 403
CspCI CAANNNNNGTGG 2 cut(s) 1011, 1046
CviAII CATG 5 cut(s) 102, 180, 596, 1025, 1089
CviQI GTAC 1 cut(s) 403
DdeI CTNAG 2 cut(s) 151, 937
DpnI GATC 3 cut(s) 456, 696, 827
DpnII GATC 3 cut(s) 454, 694, 825
DraI TTTAAA 1 cut(s) 465
EaeI YGGCCR 2 cut(s) 134, 1047
Eam1104I CTCTTC 2 cut(s) 333, 1086
EarI CTCTTC 2 cut(s) 333, 1086
Eco24I GRGCYC 1 cut(s) 412
Eco32I GATATC 1 cut(s) 686
Eco47I GGWCC 1 cut(s) 549
Eco57I CTGAAG 1 cut(s) 718
Eco91I GGTNACC 1 cut(s) 298
EcoO65I GGTNACC 1 cut(s) 298
EcoRII CCWGG 2 cut(s) 529, 904
EcoRV GATATC 1 cut(s) 686
EcoT22I ATGCAT 1 cut(s) 1030
EcoT38I GRGCYC 1 cut(s) 412
FaeI CATG 5 cut(s) 105, 183, 599, 1028, 1092
FalI AAGNNNNNCTT 4 cut(s) 255, 287, 560, 592
FatI CATG 5 cut(s) 101, 179, 595, 1024, 1088
FblI GTMKAC 1 cut(s) 189
FokI GGATG 6 cut(s) 80, 279, 345, 515, 751, 921
FriOI GRGCYC 1 cut(s) 412
FspBI CTAG 1 cut(s) 644
GsaI CCCAGC 1 cut(s) 771
HaeIII GGCC 2 cut(s) 136, 1049
HapII CCGG 2 cut(s) 458, 917
HgaI GACGC 1 cut(s) 607
Hin1II CATG 5 cut(s) 105, 183, 599, 1028, 1092
HinfI GANTC 7 cut(s) 5, 81, 310, 325, 875, 961, 994
HpaII CCGG 2 cut(s) 458, 917
HphI GGTGA 3 cut(s) 310, 733, 857
Hpy166II GTNNAC 4 cut(s) 190, 433, 560, 613
Hpy188I TCNGA 5 cut(s) 10, 67, 217, 631, 940
Hpy188III TCNNGA 6 cut(s) 38, 199, 557, 736, 829, 1089
Hpy8I GTNNAC 4 cut(s) 190, 433, 560, 613
Hpy99I CGWCG 5 cut(s) 135, 200, 284, 417, 623
HpyAV CCTTC 5 cut(s) 44, 196, 374, 378, 746
HpyCH4III ACNGT 2 cut(s) 280, 425
HpyCH4IV ACGT 2 cut(s) 195, 667
HpyCH4V TGCA 4 cut(s) 62, 470, 924, 1028
HpyF10VI GCNNNNNNNGC 1 cut(s) 1025
HpyF3I CTNAG 2 cut(s) 151, 937
HpySE526I ACGT 2 cut(s) 195, 667
Hsp92II CATG 5 cut(s) 105, 183, 599, 1028, 1092
Kzo9I GATC 3 cut(s) 454, 694, 825
LmnI GCTCC 1 cut(s) 1024
LweI GCATC 3 cut(s) 71, 366, 890
MabI ACCWGGT 1 cut(s) 529
MaeI CTAG 1 cut(s) 644
MaeII ACGT 2 cut(s) 195, 667
MaeIII GTNAC 5 cut(s) 112, 274, 298, 775, 900
MalI GATC 3 cut(s) 456, 696, 827
MboI GATC 3 cut(s) 454, 694, 825
MboII GAAGA 5 cut(s) 249, 350, 674, 824, 1073
MflI RGATCY 2 cut(s) 454, 694
MhlI GDGCHC 1 cut(s) 412
MlsI TGGCCA 1 cut(s) 1049
MluCI AATT 6 cut(s) 19, 224, 349, 654, 785, 792
MluNI TGGCCA 1 cut(s) 1049
MlyI GAGTC 1 cut(s) 988
MmeI TCCRAC 1 cut(s) 580
MnlI CCTC 5 cut(s) 138, 390, 481, 596, 904
Mox20I TGGCCA 1 cut(s) 1049
Mph1103I ATGCAT 1 cut(s) 1030
MroXI GAANNNNTTC 1 cut(s) 314
MscI TGGCCA 1 cut(s) 1049
MseI TTAA 6 cut(s) 227, 305, 464, 639, 716, 989
Msp20I TGGCCA 1 cut(s) 1049
MspI CCGG 2 cut(s) 458, 917
MspR9I CCNGG 2 cut(s) 531, 906
MvaI CCWGG 2 cut(s) 531, 906
MvnI CGCG 1 cut(s) 296
MwoI GCNNNNNNNGC 1 cut(s) 1025
NdeII GATC 3 cut(s) 454, 694, 825
NlaIII CATG 5 cut(s) 105, 183, 599, 1028, 1092
NmuCI GTSAC 2 cut(s) 298, 775
NsiI ATGCAT 1 cut(s) 1030
NspI RCATGY 1 cut(s) 1028
PagI TCATGA 1 cut(s) 1088
PcsI WCGNNNNNNNCGW 1 cut(s) 421
PdmI GAANNNNTTC 1 cut(s) 314
PfeI GAWTC 6 cut(s) 5, 81, 310, 325, 875, 961
PflMI CCANNNNNTGG 1 cut(s) 37
PleI GAGTC 1 cut(s) 988
PpsI GAGTC 1 cut(s) 988
Psp6I CCWGG 2 cut(s) 529, 904
PspEI GGTNACC 1 cut(s) 298
PspFI CCCAGC 1 cut(s) 767
PspGI CCWGG 2 cut(s) 529, 904
PspPI GGNCC 1 cut(s) 549
PsuI RGATCY 2 cut(s) 454, 694
RsaI GTAC 1 cut(s) 404
RsaNI GTAC 1 cut(s) 403
SaqAI TTAA 6 cut(s) 227, 305, 464, 639, 716, 989
Sau3AI GATC 3 cut(s) 454, 694, 825
Sau96I GGNCC 1 cut(s) 549
SchI GAGTC 1 cut(s) 988
ScrFI CCNGG 2 cut(s) 531, 906
SduI GDGCHC 1 cut(s) 412
SexAI ACCWGGT 1 cut(s) 529
SfaNI GCATC 3 cut(s) 71, 366, 890
SinI GGWCC 1 cut(s) 549
Sse9I AATT 6 cut(s) 19, 224, 349, 654, 785, 792
SsiI CCGC 1 cut(s) 296
SspMI CTAG 1 cut(s) 644
StyD4I CCNGG 2 cut(s) 529, 904
TaaI ACNGT 2 cut(s) 280, 425
TaiI ACGT 2 cut(s) 198, 670
TaqI TCGA 6 cut(s) 130, 198, 282, 412, 621, 828
TaqII GACCGA 1 cut(s) 1074
TasI AATT 6 cut(s) 19, 224, 349, 654, 785, 792
TatI WGTACW 1 cut(s) 402
TfiI GAWTC 6 cut(s) 5, 81, 310, 325, 875, 961
Tru1I TTAA 6 cut(s) 227, 305, 464, 639, 716, 989
Tru9I TTAA 6 cut(s) 227, 305, 464, 639, 716, 989
TscAI CASTG 2 cut(s) 166, 378
TseFI GTSAC 2 cut(s) 298, 775
Tsp45I GTSAC 2 cut(s) 298, 775
TspDTI ATGAA 6 cut(s) 300, 323, 360, 489, 568, 584
TspGWI ACGGA 1 cut(s) 303
TspRI CASTG 2 cut(s) 166, 378
Van91I CCANNNNNTGG 1 cut(s) 37
VpaK11BI GGWCC 1 cut(s) 549
XapI RAATTY 4 cut(s) 19, 349, 785, 792
XceI RCATGY 1 cut(s) 1028
XmiI GTMKAC 1 cut(s) 189
XmnI GAANNNNTTC 1 cut(s) 314
XspI CTAG 1 cut(s) 644
Zsp2I ATGCAT 1 cut(s) 1030
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.