FvH4_3g19131

Protein of unknown function (DUF295)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000064
Physical Location & Seq
Reverse (-)
12332072 .. 12333520
1449 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g19131.t1

Sequence Viewer

Length: 669 bp
ATGGATCCAGATTGGGTATCTTTTCCTAAGGACCTTCTTAATTCTGTTATGGAGAGATTAGTGTTACCTGAAGACTACTTGCGATTTAGCATTGTTTGTAAGTCATGGTATTCTGCAGCAAAGGATGATAAAGCTATTCGTGCAAGGATGACAGTTCCAATGATGTTGGTTTATACAAGCGAAAAAGATTACTGGAAGTTATACGACGTCACAATTAATAGGTTTCTGGATTTGCAAGTGAGAGTTCCCAGTAAGCGACTTTGTGGAGTTAAGAATGGCAGCGGTGACGGCCGGGGGAGGAGTAGGGGCTGCCGCCGGGGCCCATTGCTGGTGGTAGTGGTGGATGCCGGCGCCGGCCATGTGGTGGATTTGGAGGCAGGGAGAGAGAGAGGACCAGGTACACAAACAACATGGACAGATGTTGATGCAGGCGTAGACAATACTAAACGGGGGTGCCGCTTGGTTGAAGAAGTTACATGCCTTGACGACGGTATACACATCACAAAGAAGTTCATAGTCTTCAAACTGAATTTCAATATGTGCAAGCGGAAAGAAGAAACCACCTTAGGTGGGCTTGCGCGTGCTCTTTGTGGGAGAGAATACTTCAGTGGCTTTGAAGCCTTCGAGATATTCAAGTTGTCAACCGAATCACATATACTTCAACCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295

Protein Analysis

223

Amino Acids

25.09

Weight (kDa)

8.64

Isoelectric Point (pI)

28.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 6 - 44 6.2e-07 F-box domain
F-box-like PF12937 7 - 45 7.4e-06 F-box-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000064)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04090 FvH4_1g04091 FvH4_1g04110 FvH4_1g04440 FvH4_1g05330 FvH4_1g05332 FvH4_1g05560 FvH4_1g05580 FvH4_1g05590 FvH4_1g05611 FvH4_1g05892 FvH4_1g05900 FvH4_1g06763 FvH4_1g17860 FvH4_1g17860 FvH4_1g17861 FvH4_1g17880 FvH4_1g17902 FvH4_2g08142 FvH4_2g25110 FvH4_2g34380 FvH4_3g19131 FvH4_3g20501 FvH4_4g02770 FvH4_4g02771 FvH4_4g17610 FvH4_4g26951 FvH4_4g28330 FvH4_4g29110 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29690 FvH4_4g29691 FvH4_4g30221 FvH4_4g30230 FvH4_4g30240 FvH4_4g30602 FvH4_4g30610 FvH4_6g01351 FvH4_6g01780 FvH4_6g01890 FvH4_6g47150 FvH4_6g52260 FvH4_6g52703 FvH4_7g23210 FvH4_7g23240 FvH4_7g23350 FvH4_7g28790 FvH4_7g28820 FvH4_7g28830 FvH4_7g28840 FvH4_7g28890 FvH4_7g29040 FvH4_7g29050 FvH4_7g29990 FvH4_7g33871 FvH4_c6g00090
malus_domestica MD01G1180800.v1.1 MD01G1199400.v1.1 MD02G1310000.v1.1 MD04G1097400.v1.1 MD07G1264800.v1.1 MD07G1264900.v1.1 MD07G1270200.v1.1 MD07G1270300.v1.1 MD07G1270500.v1.1 MD10G1043600.v1.1 MD13G1047500.v1.1 MD13G1075200.v1.1
prunus_persica Prupe.1G009400_v2.0.a1 Prupe.1G076100_v2.0.a1 Prupe.1G158300_v2.0.a1 Prupe.1G208900_v2.0.a1 Prupe.1G273900_v2.0.a1 Prupe.2G253900_v2.0.a1 Prupe.2G255700_v2.0.a1 Prupe.2G256000_v2.0.a1 Prupe.2G280300_v2.0.a1 Prupe.2G290700_v2.0.a1 Prupe.3G068500_v2.0.a1 Prupe.4G112800_v2.0.a1 Prupe.5G168600_v2.0.a1 Prupe.5G168800_v2.0.a1 Prupe.5G169100_v2.0.a1 Prupe.8G049800_v2.0.a1
pyrus_communis pycom01g19330 pycom01g20930 pycom01g22010 pycom01g22020 pycom02g26090 pycom07g24330 pycom07g24720 pycom13g04150 pycom420g01320
rosa_chinensis RchiOBHm_Chr1g0324121 RchiOBHm_Chr1g0324251 RchiOBHm_Chr1g0343741 RchiOBHm_Chr1g0355031 RchiOBHm_Chr1g0359461 RchiOBHm_Chr1g0376351 RchiOBHm_Chr1g0376381 RchiOBHm_Chr2g0092531 RchiOBHm_Chr2g0108311 RchiOBHm_Chr2g0108321 RchiOBHm_Chr2g0108331 RchiOBHm_Chr2g0133991 RchiOBHm_Chr2g0156691 RchiOBHm_Chr2g0173801 RchiOBHm_Chr3g0449701 RchiOBHm_Chr3g0449861 RchiOBHm_Chr4g0417201 RchiOBHm_Chr4g0417931 RchiOBHm_Chr4g0424551 RchiOBHm_Chr4g0442921 RchiOBHm_Chr4g0442931 RchiOBHm_Chr5g0032171 RchiOBHm_Chr5g0032191 RchiOBHm_Chr5g0032221 RchiOBHm_Chr6g0258051 RchiOBHm_Chr6g0277851 RchiOBHm_Chr6g0291671 RchiOBHm_Chr6g0291691 RchiOBHm_Chr6g0312761 RchiOBHm_Chr7g0223801 RchiOBHm_Chr7g0224141
rosa_laevigata RLG00000001917 RLG00000001951 RLG00000005804 RLG00000006309 RLG00000006344 RLG00000006458 RLG00000016168 RLG00000016259 RLG00000016305 RLG00000016306 RLG00000019810 RLG00000022223 RLG00000026077 RLG00000026607 RLG00000029703 RLG00000033364 RLG00000034633 RLG00000034637
rosa_multiflora Rmu_co8010764.1_g000001 Rmu_co8262143.1_g000001 Rmu_co8346175.1_g000001 Rmu_sc0000096.1_g000016 Rmu_sc0000544.1_g000003 Rmu_sc0000591.1_g000007 Rmu_sc0000756.1_g000029 Rmu_sc0000841.1_g000017 Rmu_sc0000907.1_g000020 Rmu_sc0000954.1_g000004 Rmu_sc0001195.1_g000007 Rmu_sc0001198.1_g000008 Rmu_sc0001201.1_g000011 Rmu_sc0001201.1_g000013 Rmu_sc0001782.1_g000035 Rmu_sc0001904.1_g000004 Rmu_sc0001962.1_g000039 Rmu_sc0002113.1_g000021 Rmu_sc0002226.1_g000017 Rmu_sc0002226.1_g000020 Rmu_sc0002327.1_g000005 Rmu_sc0002372.1_g000010 Rmu_sc0002372.1_g000014 Rmu_sc0002687.1_g000005 Rmu_sc0003031.1_g000019 Rmu_sc0003076.1_g000014 Rmu_sc0004296.1_g000009 Rmu_sc0004540.1_g000009 Rmu_sc0005369.1_g000002 Rmu_sc0005375.1_g000003 Rmu_sc0005375.1_g000013 Rmu_sc0005742.1_g000008 Rmu_sc0005742.1_g000015 Rmu_sc0005742.1_g000021 Rmu_sc0007419.1_g000011 Rmu_sc0008909.1_g000008 Rmu_sc0010556.1_g000018 Rmu_sc0010999.1_g000008 Rmu_sc0017510.1_g000003 Rmu_sc0017556.1_g000001 Rmu_sc0017900.1_g000007 Rmu_sc0024249.1_g000001 Rmu_sc0032377.1_g000001 Rmu_sc0033569.1_g000001 Rmu_sc0036457.1_g000001 Rmu_sc0041304.1_g000001 Rmu_ssc0000204.1_g000011 Rmu_ssc0000438.1_g000056
rosa_roxburghii Rroxscaffold_1G00048250 Rroxscaffold_1G00048290 Rroxscaffold_2G00092800 Rroxscaffold_2G00110580 Rroxscaffold_2G00135240 Rroxscaffold_2G00135260 Rroxscaffold_2G00135300 Rroxscaffold_2G00149010 Rroxscaffold_2G00149160 Rroxscaffold_2G00149170 Rroxscaffold_2G00149630 Rroxscaffold_2G00151760 Rroxscaffold_2G00151790 Rroxscaffold_2G00152170 Rroxscaffold_3G00225510 Rroxscaffold_3G00249210 Rroxscaffold_4G00277020 Rroxscaffold_4G00281760 Rroxscaffold_4G00281770 Rroxscaffold_4G00281810 Rroxscaffold_4G00281820 Rroxscaffold_4G00282160 Rroxscaffold_4G00310340 Rroxscaffold_5G00361040 Rroxscaffold_5G00363770 Rroxscaffold_5G00366460 Rroxscaffold_5G00378270 Rroxscaffold_5G00378310 Rroxscaffold_5G00379550 Rroxscaffold_5G00379650 Rroxscaffold_6G00422110 Rroxscaffold_6G00427680 Rroxscaffold_7G00175850 Rroxscaffold_7G00175860 Rroxscaffold_7G00190720 Rroxscaffold_7G00190750 Rroxscaffold_7G00190830 Rroxscaffold_7G00196820
rosa_rugosa Rorug01G0395900 Rorug01G0444400 Rorug01G0488100 Rorug02G0001700 Rorug02G0021600 Rorug02G0025700 Rorug02G0152200 Rorug02G0271300 Rorug02G0455800 Rorug02G0572800 Rorug02G0576000 Rorug04G0146300 Rorug04G0172200 Rorug04G0172400 Rorug04G0311300 Rorug04G0312200 Rorug04G0312300 Rorug05G0129500 Rorug05G0129700 Rorug05G0250600 Rorug06G0112600 Rorug06G0220700 Rorug06G0220800 Rorug07G0114600
rosa_samantha Rh1DG066700 Rh1DG081800 Rh1DG184300 Rh1DG401900 Rh1DG402700 Rh1DG407000 Rh1DG407600 Rh2AG200800 Rh2AG201000 Rh2AG521000 Rh2BG066200 Rh2BG066300 Rh2BG073900 Rh2BG373500 Rh2BG417600 Rh2BG662600 Rh2DG066200 Rh2DG072000 Rh2DG390000 Rh2DG677700 Rh3CG020200 Rh3CG021500 Rh3CG081200 Rh4AG209600 Rh4AG362600 Rh4AG362700 Rh4AG397200 Rh4BG209800 Rh4BG209900 Rh4BG210000 Rh4CG220800 Rh4CG271300 Rh4CG388000 Rh4DG029800 Rh4DG368700 Rh4DG403900 Rh5AG035900 Rh5BG034600 Rh5BG034900 Rh5DG228700 Rh5DG228800 Rh6AG355900 Rh6CG083600 Rh6CG229000 Rh6CG229100 Rh6CG229700 Rh6CG346500 Rh6CG346600 Rh7AG362300 Rh7AG362400 Rh7AG363200 Rh7AG365100 Rh7CG380900 Rh7CG381000 Rh7CG381600 Rh7DG437600
rosa_wichuraiana Rw0G004580 Rw0G004590 Rw0G005750 Rw0G006640 Rw0G007050 Rw0G008040 Rw0G012200 Rw0G013750 Rw0G016590 Rw1G006090 Rw1G012040 Rw1G036130 Rw1G036270 Rw1G036290 Rw1G036420 Rw1G036430 Rw1G036590 Rw2G003560 Rw2G005130 Rw2G005980 Rw2G006090 Rw2G015980 Rw2G016000 Rw2G043010 Rw2G053520 Rw4G018760 Rw4G022000 Rw4G034250 Rw5G003280 Rw5G020380 Rw5G020390 Rw6G008210 Rw6G031000 Rw7G030830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 210
AccB1I GGYRCC 2 cut(s) 350, 453
AccB7I CCANNNNNTGG 1 cut(s) 364
AccI GTMKAC 2 cut(s) 435, 493
AccII CGCG 1 cut(s) 580
AciI CCGC 4 cut(s) 282, 313, 457, 547
AclWI GGATC 1 cut(s) 12
AcoI YGGCCR 2 cut(s) 289, 355
AcsI RAATTY 1 cut(s) 529
AcuI CTGAAG 2 cut(s) 90, 589
AcyI GRCGYC 2 cut(s) 207, 351
AfaI GTAC 1 cut(s) 400
AfiI CCNNNNNNNGG 3 cut(s) 328, 364, 570
AgsI TTSAA 6 cut(s) 467, 523, 535, 617, 634, 662
AjnI CCWGG 1 cut(s) 394
AluBI AGCT 1 cut(s) 134
AluI AGCT 1 cut(s) 134
Alw21I GWGCWC 1 cut(s) 586
AlwI GGATC 1 cut(s) 12
AoxI GGCC 3 cut(s) 289, 319, 355
ApaI GGGCCC 1 cut(s) 323
ApeKI GCWGC 3 cut(s) 116, 279, 309
ApoI RAATTY 1 cut(s) 529
AseI ATTAAT 1 cut(s) 216
AspLEI GCGC 2 cut(s) 353, 580
AspS9I GGNCC 4 cut(s) 31, 319, 320, 392
AsuC2I CCSGG 2 cut(s) 293, 317
AsuHPI GGTGA 1 cut(s) 296
AvaII GGWCC 2 cut(s) 31, 392
AxyI CCTNAGG 2 cut(s) 27, 565
BaeGI GKGCMC 1 cut(s) 323
BamHI GGATCC 1 cut(s) 4
BanI GGYRCC 2 cut(s) 350, 453
BanII GRGCYC 1 cut(s) 323
BbsI GAAGAC 2 cut(s) 78, 511
Bbv12I GWGCWC 1 cut(s) 586
BbvI GCAGC 3 cut(s) 128, 291, 296
BceAI ACGGC 1 cut(s) 304
BciT130I CCWGG 1 cut(s) 396
BcnI CCSGG 2 cut(s) 293, 317
BfmI CTRYAG 1 cut(s) 114
BfoI RGCGCY 1 cut(s) 354
BglI GCCNNNNNGGC 1 cut(s) 318
BisI GCNGC 5 cut(s) 117, 280, 310, 313, 457
BlsI GCNGC 5 cut(s) 118, 281, 311, 314, 458
Bme1390I CCNGG 3 cut(s) 293, 317, 396
Bme18I GGWCC 2 cut(s) 31, 392
BmgT120I GGNCC 4 cut(s) 31, 319, 320, 392
BmiI GGNNCC 5 cut(s) 6, 320, 321, 352, 455
BmrFI CCNGG 3 cut(s) 293, 317, 396
BmrI ACTGGG 1 cut(s) 243
BmsI GCATC 2 cut(s) 334, 415
BmuI ACTGGG 1 cut(s) 243
BpiI GAAGAC 2 cut(s) 78, 511
BpuMI CCSGG 2 cut(s) 293, 317
BsaHI GRCGYC 2 cut(s) 207, 351
BsaJI CCNNGG 2 cut(s) 292, 316
Bsc4I CCNNNNNNNGG 3 cut(s) 328, 364, 570
Bse118I RCCGGY 2 cut(s) 347, 353
Bse1I ACTGG 2 cut(s) 197, 249
Bse21I CCTNAGG 2 cut(s) 27, 565
Bse3DI GCAATG 1 cut(s) 323
BseBI CCWGG 1 cut(s) 396
BseDI CCNNGG 2 cut(s) 292, 316
BseGI GGATG 3 cut(s) 130, 153, 349
BseLI CCNNNNNNNGG 3 cut(s) 328, 364, 570
BseMI GCAATG 1 cut(s) 323
BseNI ACTGG 2 cut(s) 197, 249
BseRI GAGGAG 1 cut(s) 313
BseSI GKGCMC 1 cut(s) 323
BseX3I CGGCCG 1 cut(s) 289
BseXI GCAGC 3 cut(s) 128, 291, 296
Bsh1236I CGCG 1 cut(s) 580
Bsh1285I CGRYCG 1 cut(s) 292
BshFI GGCC 3 cut(s) 291, 321, 357
BshNI GGYRCC 2 cut(s) 350, 453
BsiEI CGRYCG 1 cut(s) 292
BsiHKAI GWGCWC 1 cut(s) 586
BsiSI CCGG 4 cut(s) 292, 316, 348, 354
BslI CCNNNNNNNGG 3 cut(s) 328, 364, 570
BsnI GGCC 3 cut(s) 291, 321, 357
Bsp120I GGGCCC 1 cut(s) 319
Bsp1286I GDGCHC 2 cut(s) 323, 586
Bsp143I GATC 1 cut(s) 4
BspACI CCGC 4 cut(s) 282, 313, 457, 547
BspANI GGCC 3 cut(s) 291, 321, 357
BspFNI CGCG 1 cut(s) 580
BspLI GGNNCC 5 cut(s) 6, 320, 321, 352, 455
BspMAI CTGCAG 1 cut(s) 118
BspPI GGATC 1 cut(s) 12
BspT107I GGYRCC 2 cut(s) 350, 453
BsrDI GCAATG 1 cut(s) 323
BsrFI RCCGGY 2 cut(s) 347, 353
BsrI ACTGG 2 cut(s) 197, 249
BssAI RCCGGY 2 cut(s) 347, 353
BssECI CCNNGG 2 cut(s) 292, 316
BssMI GATC 1 cut(s) 4
BssNAI GTATAC 1 cut(s) 494
BssNI GRCGYC 2 cut(s) 207, 351
Bst1107I GTATAC 1 cut(s) 494
Bst2UI CCWGG 1 cut(s) 396
Bst4CI ACNGT 2 cut(s) 154, 491
BstACI GRCGYC 2 cut(s) 207, 351
BstC8I GCNNGC 6 cut(s) 349, 355, 430, 545, 576, 582
BstDEI CTNAG 2 cut(s) 27, 565
BstF5I GGATG 3 cut(s) 130, 153, 349
BstFNI CGCG 1 cut(s) 580
BstH2I RGCGCY 1 cut(s) 354
BstHHI GCGC 2 cut(s) 353, 580
BstKTI GATC 1 cut(s) 7
BstMBI GATC 1 cut(s) 4
BstMCI CGRYCG 1 cut(s) 292
BstMWI GCNNNNNNNGC 3 cut(s) 140, 288, 318
BstNI CCWGG 1 cut(s) 396
BstNSI RCATGY 1 cut(s) 480
BstSCI CCNGG 3 cut(s) 291, 315, 394
BstSFI CTRYAG 1 cut(s) 114
BstSLI GKGCMC 1 cut(s) 323
BstUI CGCG 1 cut(s) 580
BstV1I GCAGC 3 cut(s) 128, 291, 296
BstV2I GAAGAC 2 cut(s) 78, 511
BstX2I RGATCY 1 cut(s) 4
BstYI RGATCY 1 cut(s) 4
BstZ17I GTATAC 1 cut(s) 494
BstZI CGGCCG 1 cut(s) 289
Bsu36I CCTNAGG 2 cut(s) 27, 565
BsuRI GGCC 3 cut(s) 291, 321, 357
BtsCI GGATG 3 cut(s) 130, 153, 349
BtsIMutI CAGTG 1 cut(s) 613
Cac8I GCNNGC 6 cut(s) 349, 355, 430, 545, 576, 582
CfoI GCGC 2 cut(s) 353, 580
Cfr10I RCCGGY 2 cut(s) 347, 353
Cfr13I GGNCC 4 cut(s) 31, 319, 320, 392
CsiI ACCWGGT 1 cut(s) 394
Csp6I GTAC 1 cut(s) 399
CviAII CATG 5 cut(s) 105, 359, 411, 477, 666
CviJI RGCY 8 cut(s) 134, 291, 309, 321, 357, 574, 612, 620
CviKI_1 RGCY 8 cut(s) 134, 291, 309, 321, 357, 574, 612, 620
CviQI GTAC 1 cut(s) 399
DdeI CTNAG 2 cut(s) 27, 565
DinI GGCGCC 1 cut(s) 352
DpnI GATC 1 cut(s) 6
DpnII GATC 1 cut(s) 4
EaeI YGGCCR 2 cut(s) 289, 355
EagI CGGCCG 1 cut(s) 289
EclXI CGGCCG 1 cut(s) 289
Eco24I GRGCYC 1 cut(s) 323
Eco47I GGWCC 2 cut(s) 31, 392
Eco52I CGGCCG 1 cut(s) 289
Eco57I CTGAAG 2 cut(s) 90, 589
Eco81I CCTNAGG 2 cut(s) 27, 565
EcoO109I RGGNCCY 2 cut(s) 31, 319
EcoRII CCWGG 1 cut(s) 394
EcoT38I GRGCYC 1 cut(s) 323
EgeI GGCGCC 1 cut(s) 352
EheI GGCGCC 1 cut(s) 352
FaeI CATG 5 cut(s) 108, 362, 414, 480, 669
FatI CATG 5 cut(s) 104, 358, 410, 476, 665
FblI GTMKAC 2 cut(s) 435, 493
Fnu4HI GCNGC 5 cut(s) 117, 280, 310, 313, 457
FokI GGATG 3 cut(s) 137, 160, 356
FriOI GRGCYC 1 cut(s) 323
Fsp4HI GCNGC 5 cut(s) 117, 280, 310, 313, 457
GlaI GCGC 2 cut(s) 352, 579
GluI GCNGC 5 cut(s) 117, 280, 310, 313, 457
HaeII RGCGCY 1 cut(s) 354
HaeIII GGCC 3 cut(s) 291, 321, 357
HapII CCGG 4 cut(s) 292, 316, 348, 354
HhaI GCGC 2 cut(s) 353, 580
Hin1I GRCGYC 2 cut(s) 207, 351
Hin1II CATG 5 cut(s) 108, 362, 414, 480, 669
Hin6I GCGC 2 cut(s) 351, 578
HinP1I GCGC 2 cut(s) 351, 578
HincII GTYRAC 1 cut(s) 642
HindII GTYRAC 1 cut(s) 642
HinfI GANTC 1 cut(s) 647
HpaII CCGG 4 cut(s) 292, 316, 348, 354
HphI GGTGA 1 cut(s) 296
Hpy166II GTNNAC 4 cut(s) 401, 436, 494, 642
Hpy188III TCNNGA 3 cut(s) 8, 227, 625
Hpy8I GTNNAC 4 cut(s) 401, 436, 494, 642
Hpy99I CGWCG 2 cut(s) 209, 491
HpyAV CCTTC 2 cut(s) 44, 631
HpyCH4III ACNGT 2 cut(s) 154, 491
HpyCH4IV ACGT 1 cut(s) 207
HpyCH4V TGCA 5 cut(s) 116, 143, 235, 428, 543
HpyF10VI GCNNNNNNNGC 3 cut(s) 140, 288, 318
HpyF3I CTNAG 2 cut(s) 27, 565
HpySE526I ACGT 1 cut(s) 207
Hsp92I GRCGYC 2 cut(s) 207, 351
Hsp92II CATG 5 cut(s) 108, 362, 414, 480, 669
HspAI GCGC 2 cut(s) 351, 578
KasI GGCGCC 1 cut(s) 350
KroI GCCGGC 2 cut(s) 347, 353
KroNI GCCGGC 2 cut(s) 349, 355
Kzo9I GATC 1 cut(s) 4
Lsp1109I GCAGC 3 cut(s) 128, 291, 296
LweI GCATC 2 cut(s) 334, 415
MabI ACCWGGT 1 cut(s) 394
MaeII ACGT 1 cut(s) 207
MaeIII GTNAC 4 cut(s) 63, 208, 284, 472
MalI GATC 1 cut(s) 6
MboI GATC 1 cut(s) 4
MboII GAAGA 4 cut(s) 83, 479, 511, 566
MflI RGATCY 1 cut(s) 4
MhlI GDGCHC 2 cut(s) 323, 586
MluCI AATT 3 cut(s) 40, 213, 529
Mly113I GGCGCC 1 cut(s) 351
MnlI CCTC 3 cut(s) 291, 367, 383
MroNI GCCGGC 2 cut(s) 347, 353
MseI TTAA 3 cut(s) 39, 216, 270
MspA1I CMGCKG 1 cut(s) 282
MspI CCGG 4 cut(s) 292, 316, 348, 354
MspR9I CCNGG 3 cut(s) 293, 317, 396
MvaI CCWGG 1 cut(s) 396
MvnI CGCG 1 cut(s) 580
MwoI GCNNNNNNNGC 3 cut(s) 140, 288, 318
NaeI GCCGGC 2 cut(s) 349, 355
NarI GGCGCC 1 cut(s) 351
NciI CCSGG 2 cut(s) 293, 317
NdeII GATC 1 cut(s) 4
NgoMIV GCCGGC 2 cut(s) 347, 353
NlaIII CATG 5 cut(s) 108, 362, 414, 480, 669
NlaIV GGNNCC 5 cut(s) 6, 320, 321, 352, 455
NmuCI GTSAC 2 cut(s) 208, 284
NspI RCATGY 1 cut(s) 480
PdiI GCCGGC 2 cut(s) 349, 355
PfeI GAWTC 1 cut(s) 647
PflMI CCANNNNNTGG 1 cut(s) 364
PkrI GCNGC 5 cut(s) 118, 281, 311, 314, 458
PluTI GGCGCC 1 cut(s) 354
PpuMI RGGWCCY 1 cut(s) 31
PshBI ATTAAT 1 cut(s) 216
Psp5II RGGWCCY 1 cut(s) 31
Psp6I CCWGG 1 cut(s) 394
PspGI CCWGG 1 cut(s) 394
PspN4I GGNNCC 5 cut(s) 6, 320, 321, 352, 455
PspOMI GGGCCC 1 cut(s) 319
PspPI GGNCC 4 cut(s) 31, 319, 320, 392
PspPPI RGGWCCY 1 cut(s) 31
PstI CTGCAG 1 cut(s) 118
PsuI RGATCY 1 cut(s) 4
RsaI GTAC 1 cut(s) 400
RsaNI GTAC 1 cut(s) 399
SaqAI TTAA 3 cut(s) 39, 216, 270
SatI GCNGC 5 cut(s) 117, 280, 310, 313, 457
Sau3AI GATC 1 cut(s) 4
Sau96I GGNCC 4 cut(s) 31, 319, 320, 392
ScrFI CCNGG 3 cut(s) 293, 317, 396
SduI GDGCHC 2 cut(s) 323, 586
SetI ASST 8 cut(s) 36, 70, 136, 210, 224, 400, 566, 571
SexAI ACCWGGT 1 cut(s) 394
SfaNI GCATC 2 cut(s) 334, 415
SfcI CTRYAG 1 cut(s) 114
SfoI GGCGCC 1 cut(s) 352
SinI GGWCC 2 cut(s) 31, 392
Sse9I AATT 3 cut(s) 40, 213, 529
SsiI CCGC 4 cut(s) 282, 313, 457, 547
SspDI GGCGCC 1 cut(s) 350
StyD4I CCNGG 3 cut(s) 291, 315, 394
TaaI ACNGT 2 cut(s) 154, 491
TaiI ACGT 1 cut(s) 210
TaqI TCGA 1 cut(s) 624
TasI AATT 3 cut(s) 40, 213, 529
TauI GCSGC 2 cut(s) 315, 459
TfiI GAWTC 1 cut(s) 647
Tru1I TTAA 3 cut(s) 39, 216, 270
Tru9I TTAA 3 cut(s) 39, 216, 270
TscAI CASTG 1 cut(s) 613
TseFI GTSAC 2 cut(s) 208, 284
TseI GCWGC 3 cut(s) 116, 279, 309
Tsp45I GTSAC 2 cut(s) 208, 284
TspDTI ATGAA 1 cut(s) 502
TspRI CASTG 1 cut(s) 613
Van91I CCANNNNNTGG 1 cut(s) 364
VpaK11BI GGWCC 2 cut(s) 31, 392
VspI ATTAAT 1 cut(s) 216
XapI RAATTY 1 cut(s) 529
XceI RCATGY 1 cut(s) 480
XmiI GTMKAC 2 cut(s) 435, 493
ZraI GACGTC 1 cut(s) 208
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.