Rmu_sc0002327.1_g000005

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002327.1
OG0000064
Physical Location & Seq
Forward (+)
26657 .. 27778
1122 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002327.1_g000005.1.cds

Sequence Viewer

Length: 1122 bp
atgaccagacgaaataaattgaataaatacgctgcagctacctttagtagctacttatcagcatggcctgatcttctctttttgattctggacaagttgttggaacccattgaccatgttcgctgtgctctcgtctgcaaggaatggcattcccttgcaaaagaatataaccttacaacgcagcgctggcacagggtacttccaatgctcatgatatctgccggatcctcaaaaacgctgtacagtgtttccgaaggaaaaaactacattaaaaatgttcagcttccgtacaaacgtaagaggttttgtggctctagccatggttggttggccatagtagacaaaactagtcgtgacataactctcgtgaacccttttgcacaagcaatggcgcccattcatctccctcatttgaacgaggacgtctcaaaggtcatcctatccgctgatcctgctttgaatccgaatagttatatggttatagcaatctacaattcgatacacttggctttccttaaaggagggcaggaagattggaattgcatcagactagactcactacatcaccatcttactgatgttctattttataaaagccaaatctacgcggtatcagtgcatggaacgattgtgtcaatcaatgttaacaagtgtgttatcaactcttcacatcctcgacctccagaattactggatgttcgggtattcatgactcgcattagagatttggatcaggcctatcttgtggaatcaaccaagggacacctatggcacgtacaaagatgtttaataggagtcacgcaatttgacggtaatgtacttttcgaagagggattcagggtatacaaggtggtgttcagcgatacagatggttgcatggtgaagcatgttgaggtgaaaaccataggagatgaggctttgttccttggcaaaaattattcagtctctgtttcggcttcaaagtttcctgggtgccagccaaattccatatactacactggagatttgaaagaatttgttatgagaattttcgatgtagagttcggaaccgcttgtgcagttatagaaggtgaaaagccacgcgcactttggattacgccaccgtttaagggcctcggctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295 F-box F-box-like

Protein Analysis

373

Amino Acids

42.27

Weight (kDa)

8.72

Isoelectric Point (pI)

35.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000064)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04090 FvH4_1g04091 FvH4_1g04110 FvH4_1g04440 FvH4_1g05330 FvH4_1g05332 FvH4_1g05560 FvH4_1g05580 FvH4_1g05590 FvH4_1g05611 FvH4_1g05892 FvH4_1g05900 FvH4_1g06763 FvH4_1g17860 FvH4_1g17860 FvH4_1g17861 FvH4_1g17880 FvH4_1g17902 FvH4_2g08142 FvH4_2g25110 FvH4_2g34380 FvH4_3g19131 FvH4_3g20501 FvH4_4g02770 FvH4_4g02771 FvH4_4g17610 FvH4_4g26951 FvH4_4g28330 FvH4_4g29110 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29690 FvH4_4g29691 FvH4_4g30221 FvH4_4g30230 FvH4_4g30240 FvH4_4g30602 FvH4_4g30610 FvH4_6g01351 FvH4_6g01780 FvH4_6g01890 FvH4_6g47150 FvH4_6g52260 FvH4_6g52703 FvH4_7g23210 FvH4_7g23240 FvH4_7g23350 FvH4_7g28790 FvH4_7g28820 FvH4_7g28830 FvH4_7g28840 FvH4_7g28890 FvH4_7g29040 FvH4_7g29050 FvH4_7g29990 FvH4_7g33871 FvH4_c6g00090
malus_domestica MD01G1180800.v1.1 MD01G1199400.v1.1 MD02G1310000.v1.1 MD04G1097400.v1.1 MD07G1264800.v1.1 MD07G1264900.v1.1 MD07G1270200.v1.1 MD07G1270300.v1.1 MD07G1270500.v1.1 MD10G1043600.v1.1 MD13G1047500.v1.1 MD13G1075200.v1.1
prunus_persica Prupe.1G009400_v2.0.a1 Prupe.1G076100_v2.0.a1 Prupe.1G158300_v2.0.a1 Prupe.1G208900_v2.0.a1 Prupe.1G273900_v2.0.a1 Prupe.2G253900_v2.0.a1 Prupe.2G255700_v2.0.a1 Prupe.2G256000_v2.0.a1 Prupe.2G280300_v2.0.a1 Prupe.2G290700_v2.0.a1 Prupe.3G068500_v2.0.a1 Prupe.4G112800_v2.0.a1 Prupe.5G168600_v2.0.a1 Prupe.5G168800_v2.0.a1 Prupe.5G169100_v2.0.a1 Prupe.8G049800_v2.0.a1
pyrus_communis pycom01g19330 pycom01g20930 pycom01g22010 pycom01g22020 pycom02g26090 pycom07g24330 pycom07g24720 pycom13g04150 pycom420g01320
rosa_chinensis RchiOBHm_Chr1g0324121 RchiOBHm_Chr1g0324251 RchiOBHm_Chr1g0343741 RchiOBHm_Chr1g0355031 RchiOBHm_Chr1g0359461 RchiOBHm_Chr1g0376351 RchiOBHm_Chr1g0376381 RchiOBHm_Chr2g0092531 RchiOBHm_Chr2g0108311 RchiOBHm_Chr2g0108321 RchiOBHm_Chr2g0108331 RchiOBHm_Chr2g0133991 RchiOBHm_Chr2g0156691 RchiOBHm_Chr2g0173801 RchiOBHm_Chr3g0449701 RchiOBHm_Chr3g0449861 RchiOBHm_Chr4g0417201 RchiOBHm_Chr4g0417931 RchiOBHm_Chr4g0424551 RchiOBHm_Chr4g0442921 RchiOBHm_Chr4g0442931 RchiOBHm_Chr5g0032171 RchiOBHm_Chr5g0032191 RchiOBHm_Chr5g0032221 RchiOBHm_Chr6g0258051 RchiOBHm_Chr6g0277851 RchiOBHm_Chr6g0291671 RchiOBHm_Chr6g0291691 RchiOBHm_Chr6g0312761 RchiOBHm_Chr7g0223801 RchiOBHm_Chr7g0224141
rosa_laevigata RLG00000001917 RLG00000001951 RLG00000005804 RLG00000006309 RLG00000006344 RLG00000006458 RLG00000016168 RLG00000016259 RLG00000016305 RLG00000016306 RLG00000019810 RLG00000022223 RLG00000026077 RLG00000026607 RLG00000029703 RLG00000033364 RLG00000034633 RLG00000034637
rosa_multiflora Rmu_co8010764.1_g000001 Rmu_co8262143.1_g000001 Rmu_co8346175.1_g000001 Rmu_sc0000096.1_g000016 Rmu_sc0000544.1_g000003 Rmu_sc0000591.1_g000007 Rmu_sc0000756.1_g000029 Rmu_sc0000841.1_g000017 Rmu_sc0000907.1_g000020 Rmu_sc0000954.1_g000004 Rmu_sc0001195.1_g000007 Rmu_sc0001198.1_g000008 Rmu_sc0001201.1_g000011 Rmu_sc0001201.1_g000013 Rmu_sc0001782.1_g000035 Rmu_sc0001904.1_g000004 Rmu_sc0001962.1_g000039 Rmu_sc0002113.1_g000021 Rmu_sc0002226.1_g000017 Rmu_sc0002226.1_g000020 Rmu_sc0002327.1_g000005 Rmu_sc0002372.1_g000010 Rmu_sc0002372.1_g000014 Rmu_sc0002687.1_g000005 Rmu_sc0003031.1_g000019 Rmu_sc0003076.1_g000014 Rmu_sc0004296.1_g000009 Rmu_sc0004540.1_g000009 Rmu_sc0005369.1_g000002 Rmu_sc0005375.1_g000003 Rmu_sc0005375.1_g000013 Rmu_sc0005742.1_g000008 Rmu_sc0005742.1_g000015 Rmu_sc0005742.1_g000021 Rmu_sc0007419.1_g000011 Rmu_sc0008909.1_g000008 Rmu_sc0010556.1_g000018 Rmu_sc0010999.1_g000008 Rmu_sc0017510.1_g000003 Rmu_sc0017556.1_g000001 Rmu_sc0017900.1_g000007 Rmu_sc0024249.1_g000001 Rmu_sc0032377.1_g000001 Rmu_sc0033569.1_g000001 Rmu_sc0036457.1_g000001 Rmu_sc0041304.1_g000001 Rmu_ssc0000204.1_g000011 Rmu_ssc0000438.1_g000056
rosa_roxburghii Rroxscaffold_1G00048250 Rroxscaffold_1G00048290 Rroxscaffold_2G00092800 Rroxscaffold_2G00110580 Rroxscaffold_2G00135240 Rroxscaffold_2G00135260 Rroxscaffold_2G00135300 Rroxscaffold_2G00149010 Rroxscaffold_2G00149160 Rroxscaffold_2G00149170 Rroxscaffold_2G00149630 Rroxscaffold_2G00151760 Rroxscaffold_2G00151790 Rroxscaffold_2G00152170 Rroxscaffold_3G00225510 Rroxscaffold_3G00249210 Rroxscaffold_4G00277020 Rroxscaffold_4G00281760 Rroxscaffold_4G00281770 Rroxscaffold_4G00281810 Rroxscaffold_4G00281820 Rroxscaffold_4G00282160 Rroxscaffold_4G00310340 Rroxscaffold_5G00361040 Rroxscaffold_5G00363770 Rroxscaffold_5G00366460 Rroxscaffold_5G00378270 Rroxscaffold_5G00378310 Rroxscaffold_5G00379550 Rroxscaffold_5G00379650 Rroxscaffold_6G00422110 Rroxscaffold_6G00427680 Rroxscaffold_7G00175850 Rroxscaffold_7G00175860 Rroxscaffold_7G00190720 Rroxscaffold_7G00190750 Rroxscaffold_7G00190830 Rroxscaffold_7G00196820
rosa_rugosa Rorug01G0395900 Rorug01G0444400 Rorug01G0488100 Rorug02G0001700 Rorug02G0021600 Rorug02G0025700 Rorug02G0152200 Rorug02G0271300 Rorug02G0455800 Rorug02G0572800 Rorug02G0576000 Rorug04G0146300 Rorug04G0172200 Rorug04G0172400 Rorug04G0311300 Rorug04G0312200 Rorug04G0312300 Rorug05G0129500 Rorug05G0129700 Rorug05G0250600 Rorug06G0112600 Rorug06G0220700 Rorug06G0220800 Rorug07G0114600
rosa_samantha Rh1DG066700 Rh1DG081800 Rh1DG184300 Rh1DG401900 Rh1DG402700 Rh1DG407000 Rh1DG407600 Rh2AG200800 Rh2AG201000 Rh2AG521000 Rh2BG066200 Rh2BG066300 Rh2BG073900 Rh2BG373500 Rh2BG417600 Rh2BG662600 Rh2DG066200 Rh2DG072000 Rh2DG390000 Rh2DG677700 Rh3CG020200 Rh3CG021500 Rh3CG081200 Rh4AG209600 Rh4AG362600 Rh4AG362700 Rh4AG397200 Rh4BG209800 Rh4BG209900 Rh4BG210000 Rh4CG220800 Rh4CG271300 Rh4CG388000 Rh4DG029800 Rh4DG368700 Rh4DG403900 Rh5AG035900 Rh5BG034600 Rh5BG034900 Rh5DG228700 Rh5DG228800 Rh6AG355900 Rh6CG083600 Rh6CG229000 Rh6CG229100 Rh6CG229700 Rh6CG346500 Rh6CG346600 Rh7AG362300 Rh7AG362400 Rh7AG363200 Rh7AG365100 Rh7CG380900 Rh7CG381000 Rh7CG381600 Rh7DG437600
rosa_wichuraiana Rw0G004580 Rw0G004590 Rw0G005750 Rw0G006640 Rw0G007050 Rw0G008040 Rw0G012200 Rw0G013750 Rw0G016590 Rw1G006090 Rw1G012040 Rw1G036130 Rw1G036270 Rw1G036290 Rw1G036420 Rw1G036430 Rw1G036590 Rw2G003560 Rw2G005130 Rw2G005980 Rw2G006090 Rw2G015980 Rw2G016000 Rw2G043010 Rw2G053520 Rw4G018760 Rw4G022000 Rw4G034250 Rw5G003280 Rw5G020380 Rw5G020390 Rw6G008210 Rw6G031000 Rw7G030830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 591
AatII GACGTC 1 cut(s) 426
AccB1I GGYRCC 2 cut(s) 391, 972
AccI GTMKAC 2 cut(s) 339, 843
AccII CGCG 2 cut(s) 608, 1083
AciI CCGC 3 cut(s) 444, 608, 1050
AclWI GGATC 4 cut(s) 219, 232, 443, 738
AcoI YGGCCR 1 cut(s) 330
AcsI RAATTY 3 cut(s) 982, 1013, 1026
AcyI GRCGYC 2 cut(s) 392, 423
AfaI GTAC 5 cut(s) 198, 242, 290, 777, 819
AfeI AGCGCT 1 cut(s) 185
AfiI CCNNNNNNNGG 1 cut(s) 1109
AgsI TTSAA 5 cut(s) 22, 415, 460, 960, 1009
AhlI ACTAGT 1 cut(s) 347
AjnI CCWGG 1 cut(s) 967
AluBI AGCT 3 cut(s) 38, 51, 283
AluI AGCT 3 cut(s) 38, 51, 283
Alw21I GWGCWC 1 cut(s) 130
Alw26I GTCTC 2 cut(s) 430, 949
AlwI GGATC 4 cut(s) 219, 232, 443, 738
AlwNI CAGNNNCTG 1 cut(s) 947
Aor51HI AGCGCT 1 cut(s) 185
AoxI GGCC 4 cut(s) 65, 330, 735, 1111
ApeKI GCWGC 3 cut(s) 32, 35, 181
ApoI RAATTY 3 cut(s) 982, 1013, 1026
AspLEI GCGC 3 cut(s) 186, 394, 1085
AspS9I GGNCC 1 cut(s) 1111
AsuHPI GGTGA 4 cut(s) 557, 892, 907, 1082
AsuII TTCGAA 1 cut(s) 825
BalI TGGCCA 1 cut(s) 332
BamHI GGATCC 1 cut(s) 224
BanI GGYRCC 2 cut(s) 391, 972
BauI CACGAG 1 cut(s) 365
Bbv12I GWGCWC 1 cut(s) 130
BbvI GCAGC 3 cut(s) 19, 47, 193
BccI CCATC 2 cut(s) 576, 863
BciT130I CCWGG 1 cut(s) 969
BcoDI GTCTC 2 cut(s) 430, 949
BcuI ACTAGT 1 cut(s) 347
BfaI CTAG 4 cut(s) 315, 348, 551, 1120
BfmI CTRYAG 1 cut(s) 33
BfoI RGCGCY 2 cut(s) 187, 395
BisI GCNGC 3 cut(s) 33, 36, 182
BlsI GCNGC 3 cut(s) 34, 37, 183
Bme1390I CCNGG 1 cut(s) 969
BmgT120I GGNCC 1 cut(s) 1111
BmiI GGNNCC 5 cut(s) 105, 226, 393, 974, 1048
BmrFI CCNGG 1 cut(s) 969
BmsI GCATC 1 cut(s) 552
BplI GAGNNNNNCTC 2 cut(s) 410, 442
BpmI CTGGAG 2 cut(s) 666, 1020
Bpu14I TTCGAA 1 cut(s) 825
BsaAI YACGTR 1 cut(s) 775
BsaBI GATNNNNATC 1 cut(s) 729
BsaHI GRCGYC 2 cut(s) 392, 423
BsaJI CCNNGG 5 cut(s) 319, 756, 925, 968, 1114
Bsc4I CCNNNNNNNGG 1 cut(s) 1109
Bse1I ACTGG 2 cut(s) 696, 1003
Bse3DI GCAATG 1 cut(s) 393
Bse8I GATNNNNATC 1 cut(s) 729
BseBI CCWGG 1 cut(s) 969
BseDI CCNNGG 5 cut(s) 319, 756, 925, 968, 1114
BseGI GGATG 3 cut(s) 435, 670, 700
BseJI GATNNNNATC 1 cut(s) 729
BseLI CCNNNNNNNGG 1 cut(s) 1109
BseMI GCAATG 1 cut(s) 393
BseNI ACTGG 2 cut(s) 696, 1003
BseXI GCAGC 3 cut(s) 19, 47, 193
BsgI GTGCAG 1 cut(s) 1077
Bsh1236I CGCG 2 cut(s) 608, 1083
BshFI GGCC 4 cut(s) 67, 332, 737, 1113
BshNI GGYRCC 2 cut(s) 391, 972
BsiHKAI GWGCWC 1 cut(s) 130
BsiSI CCGG 1 cut(s) 222
BslFI GGGAC 1 cut(s) 774
BslI CCNNNNNNNGG 1 cut(s) 1109
BsmAI GTCTC 2 cut(s) 430, 949
BsmBI CGTCTC 1 cut(s) 430
BsmFI GGGAC 1 cut(s) 774
BsmI GAATGC 1 cut(s) 148
BsnI GGCC 4 cut(s) 67, 332, 737, 1113
Bsp119I TTCGAA 1 cut(s) 825
Bsp1286I GDGCHC 1 cut(s) 130
Bsp1407I TGTACA 1 cut(s) 240
Bsp143I GATC 4 cut(s) 70, 224, 448, 730
Bsp19I CCATGG 1 cut(s) 319
BspACI CCGC 3 cut(s) 444, 608, 1050
BspANI GGCC 4 cut(s) 67, 332, 737, 1113
BspFNI CGCG 2 cut(s) 608, 1083
BspHI TCATGA 2 cut(s) 210, 708
BspLI GGNNCC 5 cut(s) 105, 226, 393, 974, 1048
BspMAI CTGCAG 1 cut(s) 37
BspPI GGATC 4 cut(s) 219, 232, 443, 738
BspT104I TTCGAA 1 cut(s) 825
BspT107I GGYRCC 2 cut(s) 391, 972
BsrDI GCAATG 1 cut(s) 393
BsrGI TGTACA 1 cut(s) 240
BsrI ACTGG 2 cut(s) 696, 1003
BssECI CCNNGG 5 cut(s) 319, 756, 925, 968, 1114
BssMI GATC 4 cut(s) 70, 224, 448, 730
BssNAI GTATAC 1 cut(s) 844
BssNI GRCGYC 2 cut(s) 392, 423
BssSI CACGAG 1 cut(s) 365
BssT1I CCWWGG 3 cut(s) 319, 756, 925
Bst1107I GTATAC 1 cut(s) 844
Bst2BI CACGAG 1 cut(s) 365
Bst2UI CCWGG 1 cut(s) 969
Bst4CI ACNGT 3 cut(s) 245, 812, 1104
Bst6I CTCTTC 2 cut(s) 670, 822
BstACI GRCGYC 2 cut(s) 392, 423
BstAUI TGTACA 1 cut(s) 240
BstBAI YACGTR 1 cut(s) 775
BstBI TTCGAA 1 cut(s) 825
BstC8I GCNNGC 2 cut(s) 188, 977
BstDSI CCRYGG 1 cut(s) 319
BstF5I GGATG 3 cut(s) 435, 670, 700
BstFNI CGCG 2 cut(s) 608, 1083
BstH2I RGCGCY 2 cut(s) 187, 395
BstHHI GCGC 3 cut(s) 186, 394, 1085
BstKTI GATC 4 cut(s) 73, 227, 451, 733
BstMAI GTCTC 2 cut(s) 430, 949
BstMBI GATC 4 cut(s) 70, 224, 448, 730
BstMWI GCNNNNNNNGC 2 cut(s) 187, 452
BstNI CCWGG 1 cut(s) 969
BstNSI RCATGY 1 cut(s) 890
BstSCI CCNGG 1 cut(s) 967
BstSFI CTRYAG 1 cut(s) 33
BstUI CGCG 2 cut(s) 608, 1083
BstV1I GCAGC 3 cut(s) 19, 47, 193
BstX2I RGATCY 1 cut(s) 224
BstYI RGATCY 1 cut(s) 224
BstZ17I GTATAC 1 cut(s) 844
BsuRI GGCC 4 cut(s) 67, 332, 737, 1113
BtgI CCRYGG 1 cut(s) 319
BtsCI GGATG 3 cut(s) 435, 670, 700
BtsIMutI CAGTG 3 cut(s) 250, 621, 996
Cac8I GCNNGC 2 cut(s) 188, 977
CaiI CAGNNNCTG 1 cut(s) 947
CciI TCATGA 2 cut(s) 210, 708
CfoI GCGC 3 cut(s) 186, 394, 1085
Cfr13I GGNCC 1 cut(s) 1111
Csp6I GTAC 5 cut(s) 197, 241, 289, 776, 818
CviAII CATG 8 cut(s) 63, 116, 211, 320, 620, 709, 877, 887
CviQI GTAC 5 cut(s) 197, 241, 289, 776, 818
DinI GGCGCC 1 cut(s) 393
DpnI GATC 4 cut(s) 72, 226, 450, 732
DpnII GATC 4 cut(s) 70, 224, 448, 730
EaeI YGGCCR 1 cut(s) 330
Eam1104I CTCTTC 2 cut(s) 670, 822
EarI CTCTTC 2 cut(s) 670, 822
Eco130I CCWWGG 3 cut(s) 319, 756, 925
Eco147I AGGCCT 1 cut(s) 737
Eco32I GATATC 1 cut(s) 216
Eco47III AGCGCT 1 cut(s) 185
EcoO109I RGGNCCY 1 cut(s) 1111
EcoRII CCWGG 1 cut(s) 967
EcoRV GATATC 1 cut(s) 216
EcoT14I CCWWGG 3 cut(s) 319, 756, 925
EgeI GGCGCC 1 cut(s) 393
EheI GGCGCC 1 cut(s) 393
ErhI CCWWGG 3 cut(s) 319, 756, 925
Esp3I CGTCTC 1 cut(s) 430
FaeI CATG 8 cut(s) 66, 119, 214, 323, 623, 712, 880, 890
FaqI GGGAC 1 cut(s) 774
FatI CATG 8 cut(s) 62, 115, 210, 319, 619, 708, 876, 886
FblI GTMKAC 2 cut(s) 339, 843
Fnu4HI GCNGC 3 cut(s) 33, 36, 182
FokI GGATG 3 cut(s) 422, 657, 707
Fsp4HI GCNGC 3 cut(s) 33, 36, 182
FspBI CTAG 4 cut(s) 315, 348, 551, 1120
GlaI GCGC 3 cut(s) 185, 393, 1084
GluI GCNGC 3 cut(s) 33, 36, 182
GsuI CTGGAG 2 cut(s) 666, 1020
HaeII RGCGCY 2 cut(s) 187, 395
HaeIII GGCC 4 cut(s) 67, 332, 737, 1113
HapII CCGG 1 cut(s) 222
HhaI GCGC 3 cut(s) 186, 394, 1085
Hin1I GRCGYC 2 cut(s) 392, 423
Hin1II CATG 8 cut(s) 66, 119, 214, 323, 623, 712, 880, 890
Hin6I GCGC 3 cut(s) 184, 392, 1083
HinP1I GCGC 3 cut(s) 184, 392, 1083
HincII GTYRAC 1 cut(s) 646
HindII GTYRAC 1 cut(s) 646
HinfI GANTC 7 cut(s) 85, 460, 554, 712, 749, 795, 834
HpaI GTTAAC 1 cut(s) 646
HpaII CCGG 1 cut(s) 222
HphI GGTGA 4 cut(s) 557, 892, 907, 1082
Hpy166II GTNNAC 4 cut(s) 340, 370, 646, 844
Hpy188I TCNGA 4 cut(s) 253, 465, 548, 1046
Hpy188III TCNNGA 6 cut(s) 89, 211, 353, 367, 683, 709
Hpy8I GTNNAC 4 cut(s) 340, 370, 646, 844
HpyAV CCTTC 2 cut(s) 248, 1061
HpyCH4III ACNGT 3 cut(s) 245, 812, 1104
HpyCH4IV ACGT 3 cut(s) 295, 423, 774
HpyCH4V TGCA 8 cut(s) 35, 138, 158, 380, 543, 619, 876, 1058
HpyF10VI GCNNNNNNNGC 2 cut(s) 187, 452
HpySE526I ACGT 3 cut(s) 295, 423, 774
Hsp92I GRCGYC 2 cut(s) 392, 423
Hsp92II CATG 8 cut(s) 66, 119, 214, 323, 623, 712, 880, 890
HspAI GCGC 3 cut(s) 184, 392, 1083
KasI GGCGCC 1 cut(s) 391
KspAI GTTAAC 1 cut(s) 646
Kzo9I GATC 4 cut(s) 70, 224, 448, 730
Lsp1109I GCAGC 3 cut(s) 19, 47, 193
LweI GCATC 1 cut(s) 552
MaeI CTAG 4 cut(s) 315, 348, 551, 1120
MaeII ACGT 3 cut(s) 295, 423, 774
MaeIII GTNAC 2 cut(s) 353, 796
MalI GATC 4 cut(s) 72, 226, 450, 732
MboI GATC 4 cut(s) 70, 224, 448, 730
MboII GAAGA 4 cut(s) 65, 542, 657, 839
MflI RGATCY 1 cut(s) 224
MhlI GDGCHC 1 cut(s) 130
MlsI TGGCCA 1 cut(s) 332
MluCI AATT 9 cut(s) 17, 493, 538, 686, 803, 934, 982, 1013, 1026
MluNI TGGCCA 1 cut(s) 332
Mly113I GGCGCC 1 cut(s) 392
MlyI GAGTC 3 cut(s) 548, 706, 804
MmeI TCCRAC 1 cut(s) 81
Mox20I TGGCCA 1 cut(s) 332
MscI TGGCCA 1 cut(s) 332
MseI TTAA 5 cut(s) 270, 516, 645, 788, 1107
Msp20I TGGCCA 1 cut(s) 332
MspA1I CMGCKG 1 cut(s) 446
MspI CCGG 1 cut(s) 222
MspR9I CCNGG 1 cut(s) 969
Mva1269I GAATGC 1 cut(s) 148
MvaI CCWGG 1 cut(s) 969
MvnI CGCG 2 cut(s) 608, 1083
MwoI GCNNNNNNNGC 2 cut(s) 187, 452
NarI GGCGCC 1 cut(s) 392
NcoI CCATGG 1 cut(s) 319
NdeII GATC 4 cut(s) 70, 224, 448, 730
NlaIII CATG 8 cut(s) 66, 119, 214, 323, 623, 712, 880, 890
NlaIV GGNNCC 5 cut(s) 105, 226, 393, 974, 1048
NmeAIII GCCGAG 1 cut(s) 1095
NmuCI GTSAC 2 cut(s) 353, 796
NspI RCATGY 1 cut(s) 890
NspV TTCGAA 1 cut(s) 825
PagI TCATGA 2 cut(s) 210, 708
PceI AGGCCT 1 cut(s) 737
PctI GAATGC 1 cut(s) 148
PfeI GAWTC 4 cut(s) 85, 460, 749, 834
PkrI GCNGC 3 cut(s) 34, 37, 183
PleI GAGTC 3 cut(s) 548, 706, 803
PluTI GGCGCC 1 cut(s) 395
PpsI GAGTC 3 cut(s) 548, 706, 803
Ppu21I YACGTR 1 cut(s) 775
PsiI TTATAA 1 cut(s) 591
Psp6I CCWGG 1 cut(s) 967
PspGI CCWGG 1 cut(s) 967
PspN4I GGNNCC 5 cut(s) 105, 226, 393, 974, 1048
PspPI GGNCC 1 cut(s) 1111
PstI CTGCAG 1 cut(s) 37
PstNI CAGNNNCTG 1 cut(s) 947
PsuI RGATCY 1 cut(s) 224
RsaI GTAC 5 cut(s) 198, 242, 290, 777, 819
RsaNI GTAC 5 cut(s) 197, 241, 289, 776, 818
SaqAI TTAA 5 cut(s) 270, 516, 645, 788, 1107
SatI GCNGC 3 cut(s) 33, 36, 182
Sau3AI GATC 4 cut(s) 70, 224, 448, 730
Sau96I GGNCC 1 cut(s) 1111
SchI GAGTC 3 cut(s) 548, 706, 804
ScrFI CCNGG 1 cut(s) 969
SduI GDGCHC 1 cut(s) 130
SfaNI GCATC 1 cut(s) 552
SfcI CTRYAG 1 cut(s) 33
SfoI GGCGCC 1 cut(s) 393
SfuI TTCGAA 1 cut(s) 825
SpeI ACTAGT 1 cut(s) 347
Sse9I AATT 9 cut(s) 17, 493, 538, 686, 803, 934, 982, 1013, 1026
SseBI AGGCCT 1 cut(s) 737
SsiI CCGC 3 cut(s) 444, 608, 1050
SspDI GGCGCC 1 cut(s) 391
SspMI CTAG 4 cut(s) 315, 348, 551, 1120
StuI AGGCCT 1 cut(s) 737
StyD4I CCNGG 1 cut(s) 967
StyI CCWWGG 3 cut(s) 319, 756, 925
TaaI ACNGT 3 cut(s) 245, 812, 1104
TaiI ACGT 3 cut(s) 298, 426, 777
TaqI TCGA 4 cut(s) 497, 676, 825, 1032
TasI AATT 9 cut(s) 17, 493, 538, 686, 803, 934, 982, 1013, 1026
TatI WGTACW 2 cut(s) 240, 817
TfiI GAWTC 4 cut(s) 85, 460, 749, 834
Tru1I TTAA 5 cut(s) 270, 516, 645, 788, 1107
Tru9I TTAA 5 cut(s) 270, 516, 645, 788, 1107
TscAI CASTG 3 cut(s) 250, 621, 1003
TseFI GTSAC 2 cut(s) 353, 796
TseI GCWGC 3 cut(s) 32, 35, 181
Tsp45I GTSAC 2 cut(s) 353, 796
TspDTI ATGAA 2 cut(s) 389, 697
TspGWI ACGGA 1 cut(s) 276
TspRI CASTG 3 cut(s) 250, 621, 1003
XapI RAATTY 3 cut(s) 982, 1013, 1026
XceI RCATGY 1 cut(s) 890
XcmI CCANNNNNNNNNTGG 1 cut(s) 1086
XmiI GTMKAC 2 cut(s) 339, 843
XspI CTAG 4 cut(s) 315, 348, 551, 1120
ZraI GACGTC 1 cut(s) 424
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.