f-box protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Beta-prop_KIB1-4 | PF03478 | 78 - 368 | 3.5e-37 | KIB1-4 beta-propeller |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 910, 1186 |
| AccB1I | GGYRCC | 1 cut(s) | 1005 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 394, 1205 |
| AccI | GTMKAC | 2 cut(s) | 255, 651 |
| AclWI | GGATC | 3 cut(s) | 488, 501, 849 |
| AcoI | YGGCCR | 1 cut(s) | 418 |
| AcsI | RAATTY | 2 cut(s) | 346, 1066 |
| AcuI | CTGAAG | 1 cut(s) | 264 |
| AfaI | GTAC | 4 cut(s) | 166, 706, 828, 1166 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 394, 460, 1205 |
| AflIII | ACRYGT | 1 cut(s) | 170 |
| AgsI | TTSAA | 6 cut(s) | 333, 599, 823, 874, 993, 1105 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 970 |
| AhlI | ACTAGT | 1 cut(s) | 23 |
| AjiI | CACGTC | 1 cut(s) | 173 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1111, 1143 |
| AluBI | AGCT | 3 cut(s) | 187, 460, 799 |
| AluI | AGCT | 3 cut(s) | 187, 460, 799 |
| Alw21I | GWGCWC | 1 cut(s) | 428 |
| Alw26I | GTCTC | 4 cut(s) | 56, 936, 941, 1214 |
| AlwI | GGATC | 3 cut(s) | 488, 501, 849 |
| Ama87I | CYCGRG | 1 cut(s) | 455 |
| AoxI | GGCC | 4 cut(s) | 179, 418, 441, 468 |
| ApeKI | GCWGC | 2 cut(s) | 119, 916 |
| ApoI | RAATTY | 2 cut(s) | 346, 1066 |
| AseI | ATTAAT | 1 cut(s) | 1203 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 371 |
| AspLEI | GCGC | 1 cut(s) | 756 |
| AspS9I | GGNCC | 3 cut(s) | 341, 442, 469 |
| AsuC2I | CCSGG | 1 cut(s) | 213 |
| AsuHPI | GGTGA | 2 cut(s) | 725, 974 |
| AsuII | TTCGAA | 1 cut(s) | 811 |
| AvaI | CYCGRG | 1 cut(s) | 455 |
| AvaII | GGWCC | 1 cut(s) | 341 |
| BamHI | GGATCC | 1 cut(s) | 493 |
| BanI | GGYRCC | 1 cut(s) | 1005 |
| BanII | GRGCYC | 1 cut(s) | 455 |
| Bbv12I | GWGCWC | 1 cut(s) | 428 |
| BbvCI | CCTCAGC | 1 cut(s) | 1146 |
| BbvI | GCAGC | 2 cut(s) | 106, 928 |
| BccI | CCATC | 4 cut(s) | 107, 171, 402, 880 |
| BclI | TGATCA | 1 cut(s) | 3 |
| BcnI | CCSGG | 1 cut(s) | 213 |
| BcoDI | GTCTC | 4 cut(s) | 56, 936, 941, 1214 |
| BcuI | ACTAGT | 1 cut(s) | 23 |
| BfaI | CTAG | 3 cut(s) | 24, 272, 1216 |
| BfuAI | ACCTGC | 2 cut(s) | 910, 1186 |
| BisI | GCNGC | 2 cut(s) | 120, 917 |
| BlsI | GCNGC | 2 cut(s) | 121, 918 |
| Bme1390I | CCNGG | 1 cut(s) | 213 |
| Bme18I | GGWCC | 1 cut(s) | 341 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 970 |
| BmeT110I | CYCGRG | 1 cut(s) | 455 |
| BmgBI | CACGTC | 1 cut(s) | 173 |
| BmgT120I | GGNCC | 3 cut(s) | 341, 442, 469 |
| BmiI | GGNNCC | 5 cut(s) | 96, 471, 495, 1007, 1120 |
| BmrFI | CCNGG | 1 cut(s) | 213 |
| BmsI | GCATC | 2 cut(s) | 389, 616 |
| BoxI | GACNNNNGTC | 1 cut(s) | 389 |
| BpmI | CTGGAG | 1 cut(s) | 482 |
| Bpu10I | CCTNAGC | 2 cut(s) | 183, 1146 |
| Bpu14I | TTCGAA | 1 cut(s) | 811 |
| BpuEI | CTTGAG | 1 cut(s) | 742 |
| BpuMI | CCSGG | 1 cut(s) | 213 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1059 |
| BsaI | GGTCTC | 1 cut(s) | 1214 |
| BsaJI | CCNNGG | 2 cut(s) | 281, 937 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1111, 1141 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 394, 460, 1205 |
| Bse3DI | GCAATG | 1 cut(s) | 282 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1059 |
| BseDI | CCNNGG | 2 cut(s) | 281, 937 |
| BseGI | GGATG | 3 cut(s) | 204, 404, 413 |
| BseJI | GATNNNNATC | 1 cut(s) | 1059 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 394, 460, 1205 |
| BseMI | GCAATG | 1 cut(s) | 282 |
| BseMII | CTCAG | 1 cut(s) | 1160 |
| BseRI | GAGGAG | 3 cut(s) | 585, 1119, 1127 |
| BseX3I | CGGCCG | 1 cut(s) | 418 |
| BseXI | GCAGC | 2 cut(s) | 106, 928 |
| BsgI | GTGCAG | 1 cut(s) | 935 |
| Bsh1285I | CGRYCG | 1 cut(s) | 421 |
| BshFI | GGCC | 4 cut(s) | 181, 420, 443, 470 |
| BshNI | GGYRCC | 1 cut(s) | 1005 |
| BsiEI | CGRYCG | 1 cut(s) | 421 |
| BsiHKAI | GWGCWC | 1 cut(s) | 428 |
| BsiHKCI | CYCGRG | 1 cut(s) | 455 |
| BsiSI | CCGG | 2 cut(s) | 213, 421 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 394, 460, 1205 |
| BsmAI | GTCTC | 4 cut(s) | 56, 936, 941, 1214 |
| BsmBI | CGTCTC | 1 cut(s) | 936 |
| BsmI | GAATGC | 2 cut(s) | 139, 1150 |
| BsnI | GGCC | 4 cut(s) | 181, 420, 443, 470 |
| Bso31I | GGTCTC | 1 cut(s) | 1214 |
| BsoBI | CYCGRG | 1 cut(s) | 455 |
| Bsp119I | TTCGAA | 1 cut(s) | 811 |
| Bsp1286I | GDGCHC | 2 cut(s) | 428, 455 |
| Bsp1407I | TGTACA | 1 cut(s) | 164 |
| Bsp143I | GATC | 4 cut(s) | 3, 217, 493, 841 |
| BspANI | GGCC | 4 cut(s) | 181, 420, 443, 470 |
| BspCNI | CTCAG | 1 cut(s) | 1159 |
| BspLI | GGNNCC | 5 cut(s) | 96, 471, 495, 1007, 1120 |
| BspMI | ACCTGC | 2 cut(s) | 910, 1186 |
| BspPI | GGATC | 3 cut(s) | 488, 501, 849 |
| BspT104I | TTCGAA | 1 cut(s) | 811 |
| BspT107I | GGYRCC | 1 cut(s) | 1005 |
| BspTNI | GGTCTC | 1 cut(s) | 1214 |
| BsrDI | GCAATG | 1 cut(s) | 282 |
| BsrGI | TGTACA | 1 cut(s) | 164 |
| BssECI | CCNNGG | 2 cut(s) | 281, 937 |
| BssMI | GATC | 4 cut(s) | 3, 217, 493, 841 |
| BssNAI | GTATAC | 1 cut(s) | 652 |
| BssT1I | CCWWGG | 1 cut(s) | 937 |
| Bst1107I | GTATAC | 1 cut(s) | 652 |
| Bst4CI | ACNGT | 5 cut(s) | 58, 320, 518, 968, 1048 |
| Bst6I | CTCTTC | 1 cut(s) | 1155 |
| BstAUI | TGTACA | 1 cut(s) | 164 |
| BstBI | TTCGAA | 1 cut(s) | 811 |
| BstC8I | GCNNGC | 3 cut(s) | 327, 441, 468 |
| BstDEI | CTNAG | 2 cut(s) | 183, 1146 |
| BstF5I | GGATG | 3 cut(s) | 204, 404, 413 |
| BstHHI | GCGC | 1 cut(s) | 756 |
| BstKTI | GATC | 4 cut(s) | 6, 220, 496, 844 |
| BstMAI | GTCTC | 4 cut(s) | 56, 936, 941, 1214 |
| BstMBI | GATC | 4 cut(s) | 3, 217, 493, 841 |
| BstMCI | CGRYCG | 1 cut(s) | 421 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 208 |
| BstNSI | RCATGY | 1 cut(s) | 312 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 389 |
| BstSCI | CCNGG | 1 cut(s) | 211 |
| BstV1I | GCAGC | 2 cut(s) | 106, 928 |
| BstX2I | RGATCY | 1 cut(s) | 493 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 311 |
| BstYI | RGATCY | 1 cut(s) | 493 |
| BstZ17I | GTATAC | 1 cut(s) | 652 |
| BstZI | CGGCCG | 1 cut(s) | 418 |
| BsuRI | GGCC | 4 cut(s) | 181, 420, 443, 470 |
| BtrI | CACGTC | 1 cut(s) | 173 |
| BtsCI | GGATG | 3 cut(s) | 204, 404, 413 |
| BtsI | GCAGTG | 1 cut(s) | 51 |
| BtsIMutI | CAGTG | 3 cut(s) | 51, 54, 543 |
| BveI | ACCTGC | 2 cut(s) | 910, 1186 |
| Cac8I | GCNNGC | 3 cut(s) | 327, 441, 468 |
| CfoI | GCGC | 1 cut(s) | 756 |
| Cfr13I | GGNCC | 3 cut(s) | 341, 442, 469 |
| Csp6I | GTAC | 4 cut(s) | 165, 705, 827, 1165 |
| CviAII | CATG | 8 cut(s) | 107, 199, 305, 309, 338, 389, 682, 853 |
| CviQI | GTAC | 4 cut(s) | 165, 705, 827, 1165 |
| DdeI | CTNAG | 2 cut(s) | 183, 1146 |
| DpnI | GATC | 4 cut(s) | 5, 219, 495, 843 |
| DpnII | GATC | 4 cut(s) | 3, 217, 493, 841 |
| DriI | GACNNNNNGTC | 1 cut(s) | 970 |
| EaeI | YGGCCR | 1 cut(s) | 418 |
| EagI | CGGCCG | 1 cut(s) | 418 |
| Eam1104I | CTCTTC | 1 cut(s) | 1155 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 970 |
| EarI | CTCTTC | 1 cut(s) | 1155 |
| EclXI | CGGCCG | 1 cut(s) | 418 |
| Eco130I | CCWWGG | 1 cut(s) | 937 |
| Eco24I | GRGCYC | 1 cut(s) | 455 |
| Eco31I | GGTCTC | 1 cut(s) | 1214 |
| Eco47I | GGWCC | 1 cut(s) | 341 |
| Eco52I | CGGCCG | 1 cut(s) | 418 |
| Eco57I | CTGAAG | 1 cut(s) | 264 |
| Eco88I | CYCGRG | 1 cut(s) | 455 |
| EcoO109I | RGGNCCY | 1 cut(s) | 469 |
| EcoT14I | CCWWGG | 1 cut(s) | 937 |
| EcoT22I | ATGCAT | 2 cut(s) | 310, 339 |
| EcoT38I | GRGCYC | 1 cut(s) | 455 |
| ErhI | CCWWGG | 1 cut(s) | 937 |
| Esp3I | CGTCTC | 1 cut(s) | 936 |
| FaeI | CATG | 8 cut(s) | 110, 202, 308, 312, 341, 392, 685, 856 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 783, 815, 985, 1017 |
| FatI | CATG | 8 cut(s) | 106, 198, 304, 308, 337, 388, 681, 852 |
| FbaI | TGATCA | 1 cut(s) | 3 |
| FblI | GTMKAC | 2 cut(s) | 255, 651 |
| Fnu4HI | GCNGC | 2 cut(s) | 120, 917 |
| FokI | GGATG | 3 cut(s) | 191, 411, 420 |
| FriOI | GRGCYC | 1 cut(s) | 455 |
| Fsp4HI | GCNGC | 2 cut(s) | 120, 917 |
| FspBI | CTAG | 3 cut(s) | 24, 272, 1216 |
| GlaI | GCGC | 1 cut(s) | 755 |
| GluI | GCNGC | 2 cut(s) | 120, 917 |
| GsuI | CTGGAG | 1 cut(s) | 482 |
| HaeIII | GGCC | 4 cut(s) | 181, 420, 443, 470 |
| HapII | CCGG | 2 cut(s) | 213, 421 |
| HhaI | GCGC | 1 cut(s) | 756 |
| Hin1II | CATG | 8 cut(s) | 110, 202, 308, 312, 341, 392, 685, 856 |
| Hin6I | GCGC | 1 cut(s) | 754 |
| HinP1I | GCGC | 1 cut(s) | 754 |
| HincII | GTYRAC | 2 cut(s) | 661, 849 |
| HindII | GTYRAC | 2 cut(s) | 661, 849 |
| HpaII | CCGG | 2 cut(s) | 213, 421 |
| HphI | GGTGA | 2 cut(s) | 725, 974 |
| Hpy166II | GTNNAC | 5 cut(s) | 256, 652, 661, 849, 880 |
| Hpy188I | TCNGA | 3 cut(s) | 31, 244, 1159 |
| Hpy188III | TCNNGA | 3 cut(s) | 80, 221, 364 |
| Hpy8I | GTNNAC | 5 cut(s) | 256, 652, 661, 849, 880 |
| Hpy99I | CGWCG | 1 cut(s) | 177 |
| HpyAV | CCTTC | 2 cut(s) | 239, 507 |
| HpyCH4III | ACNGT | 5 cut(s) | 58, 320, 518, 968, 1048 |
| HpyCH4IV | ACGT | 2 cut(s) | 172, 807 |
| HpyCH4V | TGCA | 8 cut(s) | 129, 149, 308, 337, 402, 805, 916, 1181 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 208 |
| HpyF3I | CTNAG | 2 cut(s) | 183, 1146 |
| HpySE526I | ACGT | 2 cut(s) | 172, 807 |
| Hsp92II | CATG | 8 cut(s) | 110, 202, 308, 312, 341, 392, 685, 856 |
| HspAI | GCGC | 1 cut(s) | 754 |
| Ksp22I | TGATCA | 1 cut(s) | 3 |
| Kzo9I | GATC | 4 cut(s) | 3, 217, 493, 841 |
| LmnI | GCTCC | 2 cut(s) | 423, 463 |
| Lsp1109I | GCAGC | 2 cut(s) | 106, 928 |
| LweI | GCATC | 2 cut(s) | 389, 616 |
| MaeI | CTAG | 3 cut(s) | 24, 272, 1216 |
| MaeII | ACGT | 2 cut(s) | 172, 807 |
| MaeIII | GTNAC | 4 cut(s) | 19, 859, 962, 1139 |
| MalI | GATC | 4 cut(s) | 5, 219, 495, 843 |
| MboI | GATC | 4 cut(s) | 3, 217, 493, 841 |
| MboII | GAAGA | 5 cut(s) | 687, 825, 1064, 1146, 1172 |
| MfeI | CAATTG | 1 cut(s) | 160 |
| MflI | RGATCY | 1 cut(s) | 493 |
| MhlI | GDGCHC | 2 cut(s) | 428, 455 |
| MluCI | AATT | 6 cut(s) | 160, 228, 346, 1066, 1105, 1200 |
| MlyI | GAGTC | 3 cut(s) | 26, 58, 943 |
| MnlI | CCTC | 8 cut(s) | 204, 291, 563, 566, 1105, 1108, 1140, 1155 |
| Mph1103I | ATGCAT | 2 cut(s) | 310, 339 |
| MroXI | GAANNNNTTC | 1 cut(s) | 371 |
| MseI | TTAA | 8 cut(s) | 288, 504, 690, 696, 929, 1071, 1172, 1203 |
| MslI | CAYNNNNRTG | 3 cut(s) | 175, 309, 857 |
| MspI | CCGG | 2 cut(s) | 213, 421 |
| MspR9I | CCNGG | 1 cut(s) | 213 |
| MunI | CAATTG | 1 cut(s) | 160 |
| Mva1269I | GAATGC | 2 cut(s) | 139, 1150 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 208 |
| NciI | CCSGG | 1 cut(s) | 213 |
| NdeII | GATC | 4 cut(s) | 3, 217, 493, 841 |
| NlaIII | CATG | 8 cut(s) | 110, 202, 308, 312, 341, 392, 685, 856 |
| NlaIV | GGNNCC | 5 cut(s) | 96, 471, 495, 1007, 1120 |
| NmuCI | GTSAC | 3 cut(s) | 19, 859, 962 |
| NsiI | ATGCAT | 2 cut(s) | 310, 339 |
| NspI | RCATGY | 1 cut(s) | 312 |
| NspV | TTCGAA | 1 cut(s) | 811 |
| PctI | GAATGC | 2 cut(s) | 139, 1150 |
| PdmI | GAANNNNTTC | 1 cut(s) | 371 |
| PfeI | GAWTC | 9 cut(s) | 414, 475, 548, 667, 678, 716, 782, 1037, 1189 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 394, 1205 |
| PkrI | GCNGC | 2 cut(s) | 121, 918 |
| PleI | GAGTC | 3 cut(s) | 26, 57, 943 |
| PpsI | GAGTC | 3 cut(s) | 26, 57, 943 |
| PshAI | GACNNNNGTC | 1 cut(s) | 389 |
| PshBI | ATTAAT | 1 cut(s) | 1203 |
| PspN4I | GGNNCC | 5 cut(s) | 96, 471, 495, 1007, 1120 |
| PspPI | GGNCC | 3 cut(s) | 341, 442, 469 |
| PsuI | RGATCY | 1 cut(s) | 493 |
| RsaI | GTAC | 4 cut(s) | 166, 706, 828, 1166 |
| RsaNI | GTAC | 4 cut(s) | 165, 705, 827, 1165 |
| RseI | CAYNNNNRTG | 3 cut(s) | 175, 309, 857 |
| SaqAI | TTAA | 8 cut(s) | 288, 504, 690, 696, 929, 1071, 1172, 1203 |
| SatI | GCNGC | 2 cut(s) | 120, 917 |
| Sau3AI | GATC | 4 cut(s) | 3, 217, 493, 841 |
| Sau96I | GGNCC | 3 cut(s) | 341, 442, 469 |
| SchI | GAGTC | 3 cut(s) | 26, 58, 943 |
| ScrFI | CCNGG | 1 cut(s) | 213 |
| SduI | GDGCHC | 2 cut(s) | 428, 455 |
| SfaNI | GCATC | 2 cut(s) | 389, 616 |
| SfuI | TTCGAA | 1 cut(s) | 811 |
| SinI | GGWCC | 1 cut(s) | 341 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 175, 309, 857 |
| SmlI | CTYRAG | 1 cut(s) | 757 |
| SmoI | CTYRAG | 1 cut(s) | 757 |
| SpeI | ACTAGT | 1 cut(s) | 23 |
| Sse9I | AATT | 6 cut(s) | 160, 228, 346, 1066, 1105, 1200 |
| SspMI | CTAG | 3 cut(s) | 24, 272, 1216 |
| StyD4I | CCNGG | 1 cut(s) | 211 |
| StyI | CCWWGG | 1 cut(s) | 937 |
| TaaI | ACNGT | 5 cut(s) | 58, 320, 518, 968, 1048 |
| TaiI | ACGT | 2 cut(s) | 175, 810 |
| TaqI | TCGA | 5 cut(s) | 102, 175, 811, 1040, 1063 |
| TasI | AATT | 6 cut(s) | 160, 228, 346, 1066, 1105, 1200 |
| TatI | WGTACW | 4 cut(s) | 164, 704, 826, 1164 |
| TfiI | GAWTC | 9 cut(s) | 414, 475, 548, 667, 678, 716, 782, 1037, 1189 |
| Tru1I | TTAA | 8 cut(s) | 288, 504, 690, 696, 929, 1071, 1172, 1203 |
| Tru9I | TTAA | 8 cut(s) | 288, 504, 690, 696, 929, 1071, 1172, 1203 |
| TscAI | CASTG | 3 cut(s) | 51, 61, 550 |
| TseFI | GTSAC | 3 cut(s) | 19, 859, 962 |
| TseI | GCWGC | 2 cut(s) | 119, 916 |
| Tsp45I | GTSAC | 3 cut(s) | 19, 859, 962 |
| TspDTI | ATGAA | 1 cut(s) | 553 |
| TspRI | CASTG | 3 cut(s) | 51, 61, 550 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 394, 1205 |
| VpaK11BI | GGWCC | 1 cut(s) | 341 |
| VspI | ATTAAT | 1 cut(s) | 1203 |
| XapI | RAATTY | 2 cut(s) | 346, 1066 |
| XceI | RCATGY | 1 cut(s) | 312 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 601 |
| XmiI | GTMKAC | 2 cut(s) | 255, 651 |
| XmnI | GAANNNNTTC | 1 cut(s) | 371 |
| XspI | CTAG | 3 cut(s) | 24, 272, 1216 |
| Zsp2I | ATGCAT | 2 cut(s) | 310, 339 |