FvH4_1g05611

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000064
Physical Location & Seq
Reverse (-)
2964336 .. 2972619
8284 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g05611.t1

Sequence Viewer

Length: 981 bp
ATGGTGGACTTGAAAGTTATAGAAGGGGAGAGTGAAGCTTCTCCAAGTATGTCCTTCTACGGCACTAAAGAGTCAACCAGGAGTCAAGGTTTTGAGGAGTCACCAAAGGACAATAAAGGGAATGAGTCAGTTTTGCAGAAACATAAAAGAGGCAGTGAACATGAGCGACTGTCGTCATCTGTTGAGTTCAGACCCGATACCGGTGTTCCGCCGGAGCTCCCAGGCTCGCCGACGCTGTCTCCGTCCGATCGCCCAGGCTCGCCGGCGCTGTCTCCGTCTGAGTGTCTAGCCTCACCGGCCCGTTCTCCGTCCGAGGGCCCAGCCAATAGTGGTTCTCCAACCGGATTTCAGCATATTTCCGATCAACTGACCGGAGCAGAAAGCAGAGAGTTAGGGTTCCCAGATCAGACTAGCTCCACCTGTCCATTAATCGGAGACAATCGATCTCATCTTCCTATCTCGTCGGTTTCCGGGGCCCTGACTCCGCCGGTCGTAGGCGACCTTCTAGAAAGCAACGTGACCGCTTTGCATCCGGAAAATTATTACGTGCTCTTTGCATTACACGGACCATTATTGGCGACCCGCATAGGATATACGAATGGTTATTCTCCGCCGTTAGCGCTTATTAGAGGTGGACAAGAACCTTGGATCACGATCAAACGAATACCTCCAGATCTTCCTAAGTTCGATGATGTTATATTTCATAAATACAAAGTCTGCTTGCTTCTTGAATGGGGACATACGATAGTAACCTTGGATGTTGATAGCATTAACCTTTCACGGCCGAAAATACAGTATATGGGTTTTGAACCAAACCCCAATGATATGTTCCTTGCACATTGTTGGGAGCAATACCACGTGGAGTCAACAAACGGAGACCTATTGCTCGTTCAAAGATTTTATGCGTCTGAAGAAACCTCCTTTAGCGTTTGCAAGAACGTGTTCAACGAGCAAGATCCCCTTTTCAGCTGGTTGAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295 F-box F-box-like

Protein Analysis

327

Amino Acids

35.85

Weight (kDa)

5.08

Isoelectric Point (pI)

64.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_KIB1-4 PF03478 200 - 316 7.6e-09 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000064)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04090 FvH4_1g04091 FvH4_1g04110 FvH4_1g04440 FvH4_1g05330 FvH4_1g05332 FvH4_1g05560 FvH4_1g05580 FvH4_1g05590 FvH4_1g05611 FvH4_1g05892 FvH4_1g05900 FvH4_1g06763 FvH4_1g17860 FvH4_1g17860 FvH4_1g17861 FvH4_1g17880 FvH4_1g17902 FvH4_2g08142 FvH4_2g25110 FvH4_2g34380 FvH4_3g19131 FvH4_3g20501 FvH4_4g02770 FvH4_4g02771 FvH4_4g17610 FvH4_4g26951 FvH4_4g28330 FvH4_4g29110 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29690 FvH4_4g29691 FvH4_4g30221 FvH4_4g30230 FvH4_4g30240 FvH4_4g30602 FvH4_4g30610 FvH4_6g01351 FvH4_6g01780 FvH4_6g01890 FvH4_6g47150 FvH4_6g52260 FvH4_6g52703 FvH4_7g23210 FvH4_7g23240 FvH4_7g23350 FvH4_7g28790 FvH4_7g28820 FvH4_7g28830 FvH4_7g28840 FvH4_7g28890 FvH4_7g29040 FvH4_7g29050 FvH4_7g29990 FvH4_7g33871 FvH4_c6g00090
malus_domestica MD01G1180800.v1.1 MD01G1199400.v1.1 MD02G1310000.v1.1 MD04G1097400.v1.1 MD07G1264800.v1.1 MD07G1264900.v1.1 MD07G1270200.v1.1 MD07G1270300.v1.1 MD07G1270500.v1.1 MD10G1043600.v1.1 MD13G1047500.v1.1 MD13G1075200.v1.1
prunus_persica Prupe.1G009400_v2.0.a1 Prupe.1G076100_v2.0.a1 Prupe.1G158300_v2.0.a1 Prupe.1G208900_v2.0.a1 Prupe.1G273900_v2.0.a1 Prupe.2G253900_v2.0.a1 Prupe.2G255700_v2.0.a1 Prupe.2G256000_v2.0.a1 Prupe.2G280300_v2.0.a1 Prupe.2G290700_v2.0.a1 Prupe.3G068500_v2.0.a1 Prupe.4G112800_v2.0.a1 Prupe.5G168600_v2.0.a1 Prupe.5G168800_v2.0.a1 Prupe.5G169100_v2.0.a1 Prupe.8G049800_v2.0.a1
pyrus_communis pycom01g19330 pycom01g20930 pycom01g22010 pycom01g22020 pycom02g26090 pycom07g24330 pycom07g24720 pycom13g04150 pycom420g01320
rosa_chinensis RchiOBHm_Chr1g0324121 RchiOBHm_Chr1g0324251 RchiOBHm_Chr1g0343741 RchiOBHm_Chr1g0355031 RchiOBHm_Chr1g0359461 RchiOBHm_Chr1g0376351 RchiOBHm_Chr1g0376381 RchiOBHm_Chr2g0092531 RchiOBHm_Chr2g0108311 RchiOBHm_Chr2g0108321 RchiOBHm_Chr2g0108331 RchiOBHm_Chr2g0133991 RchiOBHm_Chr2g0156691 RchiOBHm_Chr2g0173801 RchiOBHm_Chr3g0449701 RchiOBHm_Chr3g0449861 RchiOBHm_Chr4g0417201 RchiOBHm_Chr4g0417931 RchiOBHm_Chr4g0424551 RchiOBHm_Chr4g0442921 RchiOBHm_Chr4g0442931 RchiOBHm_Chr5g0032171 RchiOBHm_Chr5g0032191 RchiOBHm_Chr5g0032221 RchiOBHm_Chr6g0258051 RchiOBHm_Chr6g0277851 RchiOBHm_Chr6g0291671 RchiOBHm_Chr6g0291691 RchiOBHm_Chr6g0312761 RchiOBHm_Chr7g0223801 RchiOBHm_Chr7g0224141
rosa_laevigata RLG00000001917 RLG00000001951 RLG00000005804 RLG00000006309 RLG00000006344 RLG00000006458 RLG00000016168 RLG00000016259 RLG00000016305 RLG00000016306 RLG00000019810 RLG00000022223 RLG00000026077 RLG00000026607 RLG00000029703 RLG00000033364 RLG00000034633 RLG00000034637
rosa_multiflora Rmu_co8010764.1_g000001 Rmu_co8262143.1_g000001 Rmu_co8346175.1_g000001 Rmu_sc0000096.1_g000016 Rmu_sc0000544.1_g000003 Rmu_sc0000591.1_g000007 Rmu_sc0000756.1_g000029 Rmu_sc0000841.1_g000017 Rmu_sc0000907.1_g000020 Rmu_sc0000954.1_g000004 Rmu_sc0001195.1_g000007 Rmu_sc0001198.1_g000008 Rmu_sc0001201.1_g000011 Rmu_sc0001201.1_g000013 Rmu_sc0001782.1_g000035 Rmu_sc0001904.1_g000004 Rmu_sc0001962.1_g000039 Rmu_sc0002113.1_g000021 Rmu_sc0002226.1_g000017 Rmu_sc0002226.1_g000020 Rmu_sc0002327.1_g000005 Rmu_sc0002372.1_g000010 Rmu_sc0002372.1_g000014 Rmu_sc0002687.1_g000005 Rmu_sc0003031.1_g000019 Rmu_sc0003076.1_g000014 Rmu_sc0004296.1_g000009 Rmu_sc0004540.1_g000009 Rmu_sc0005369.1_g000002 Rmu_sc0005375.1_g000003 Rmu_sc0005375.1_g000013 Rmu_sc0005742.1_g000008 Rmu_sc0005742.1_g000015 Rmu_sc0005742.1_g000021 Rmu_sc0007419.1_g000011 Rmu_sc0008909.1_g000008 Rmu_sc0010556.1_g000018 Rmu_sc0010999.1_g000008 Rmu_sc0017510.1_g000003 Rmu_sc0017556.1_g000001 Rmu_sc0017900.1_g000007 Rmu_sc0024249.1_g000001 Rmu_sc0032377.1_g000001 Rmu_sc0033569.1_g000001 Rmu_sc0036457.1_g000001 Rmu_sc0041304.1_g000001 Rmu_ssc0000204.1_g000011 Rmu_ssc0000438.1_g000056
rosa_roxburghii Rroxscaffold_1G00048250 Rroxscaffold_1G00048290 Rroxscaffold_2G00092800 Rroxscaffold_2G00110580 Rroxscaffold_2G00135240 Rroxscaffold_2G00135260 Rroxscaffold_2G00135300 Rroxscaffold_2G00149010 Rroxscaffold_2G00149160 Rroxscaffold_2G00149170 Rroxscaffold_2G00149630 Rroxscaffold_2G00151760 Rroxscaffold_2G00151790 Rroxscaffold_2G00152170 Rroxscaffold_3G00225510 Rroxscaffold_3G00249210 Rroxscaffold_4G00277020 Rroxscaffold_4G00281760 Rroxscaffold_4G00281770 Rroxscaffold_4G00281810 Rroxscaffold_4G00281820 Rroxscaffold_4G00282160 Rroxscaffold_4G00310340 Rroxscaffold_5G00361040 Rroxscaffold_5G00363770 Rroxscaffold_5G00366460 Rroxscaffold_5G00378270 Rroxscaffold_5G00378310 Rroxscaffold_5G00379550 Rroxscaffold_5G00379650 Rroxscaffold_6G00422110 Rroxscaffold_6G00427680 Rroxscaffold_7G00175850 Rroxscaffold_7G00175860 Rroxscaffold_7G00190720 Rroxscaffold_7G00190750 Rroxscaffold_7G00190830 Rroxscaffold_7G00196820
rosa_rugosa Rorug01G0395900 Rorug01G0444400 Rorug01G0488100 Rorug02G0001700 Rorug02G0021600 Rorug02G0025700 Rorug02G0152200 Rorug02G0271300 Rorug02G0455800 Rorug02G0572800 Rorug02G0576000 Rorug04G0146300 Rorug04G0172200 Rorug04G0172400 Rorug04G0311300 Rorug04G0312200 Rorug04G0312300 Rorug05G0129500 Rorug05G0129700 Rorug05G0250600 Rorug06G0112600 Rorug06G0220700 Rorug06G0220800 Rorug07G0114600
rosa_samantha Rh1DG066700 Rh1DG081800 Rh1DG184300 Rh1DG401900 Rh1DG402700 Rh1DG407000 Rh1DG407600 Rh2AG200800 Rh2AG201000 Rh2AG521000 Rh2BG066200 Rh2BG066300 Rh2BG073900 Rh2BG373500 Rh2BG417600 Rh2BG662600 Rh2DG066200 Rh2DG072000 Rh2DG390000 Rh2DG677700 Rh3CG020200 Rh3CG021500 Rh3CG081200 Rh4AG209600 Rh4AG362600 Rh4AG362700 Rh4AG397200 Rh4BG209800 Rh4BG209900 Rh4BG210000 Rh4CG220800 Rh4CG271300 Rh4CG388000 Rh4DG029800 Rh4DG368700 Rh4DG403900 Rh5AG035900 Rh5BG034600 Rh5BG034900 Rh5DG228700 Rh5DG228800 Rh6AG355900 Rh6CG083600 Rh6CG229000 Rh6CG229100 Rh6CG229700 Rh6CG346500 Rh6CG346600 Rh7AG362300 Rh7AG362400 Rh7AG363200 Rh7AG365100 Rh7CG380900 Rh7CG381000 Rh7CG381600 Rh7DG437600
rosa_wichuraiana Rw0G004580 Rw0G004590 Rw0G005750 Rw0G006640 Rw0G007050 Rw0G008040 Rw0G012200 Rw0G013750 Rw0G016590 Rw1G006090 Rw1G012040 Rw1G036130 Rw1G036270 Rw1G036290 Rw1G036420 Rw1G036430 Rw1G036590 Rw2G003560 Rw2G005130 Rw2G005980 Rw2G006090 Rw2G015980 Rw2G016000 Rw2G043010 Rw2G053520 Rw4G018760 Rw4G022000 Rw4G034250 Rw5G003280 Rw5G020380 Rw5G020390 Rw6G008210 Rw6G031000 Rw7G030830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 532
AciI CCGC 5 cut(s) 209, 485, 522, 583, 611
AclWI GGATC 2 cut(s) 656, 950
AcoI YGGCCR 1 cut(s) 782
AcuI CTGAAG 1 cut(s) 930
AcvI CACGTG 1 cut(s) 859
AfeI AGCGCT 1 cut(s) 621
AfiI CCNNNNNNNGG 4 cut(s) 200, 314, 431, 494
AflIII ACRYGT 1 cut(s) 939
AgeI ACCGGT 1 cut(s) 200
AgsI TTSAA 5 cut(s) 13, 731, 809, 893, 946
AjnI CCWGG 3 cut(s) 77, 220, 253
AjuI GAANNNNNNNTTGG 2 cut(s) 812, 844
AluBI AGCT 4 cut(s) 38, 217, 414, 969
AluI AGCT 4 cut(s) 38, 217, 414, 969
Alw21I GWGCWC 2 cut(s) 219, 552
Alw26I GTCTC 4 cut(s) 243, 276, 429, 870
AlwI GGATC 2 cut(s) 656, 950
Aor13HI TCCGGA 1 cut(s) 532
Aor51HI AGCGCT 1 cut(s) 621
AoxI GGCC 4 cut(s) 297, 316, 474, 782
ApaI GGGCCC 2 cut(s) 320, 478
AseI ATTAAT 1 cut(s) 428
AsiGI ACCGGT 1 cut(s) 200
Asp700I GAANNNNTTC 1 cut(s) 941
AspLEI GCGC 2 cut(s) 268, 622
AspS9I GGNCC 6 cut(s) 298, 316, 317, 474, 475, 566
AsuC2I CCSGG 1 cut(s) 472
AsuHPI GGTGA 2 cut(s) 93, 285
AvaII GGWCC 1 cut(s) 566
BaeGI GKGCMC 2 cut(s) 320, 478
BaeI ACNNNNGTAYC 2 cut(s) 189, 222
BanII GRGCYC 3 cut(s) 219, 320, 478
BarI GAAGNNNNNNTAC 2 cut(s) 486, 518
BbrPI CACGTG 1 cut(s) 859
Bbv12I GWGCWC 2 cut(s) 219, 552
BceAI ACGGC 3 cut(s) 76, 598, 797
BciT130I CCWGG 3 cut(s) 79, 222, 255
BcnI CCSGG 1 cut(s) 472
BcoDI GTCTC 4 cut(s) 243, 276, 429, 870
BfaI CTAG 3 cut(s) 287, 411, 506
BfoI RGCGCY 2 cut(s) 269, 623
BglI GCCNNNNNGGC 1 cut(s) 296
BglII AGATCT 1 cut(s) 673
Bme1390I CCNGG 4 cut(s) 79, 222, 255, 472
Bme18I GGWCC 1 cut(s) 566
BmgT120I GGNCC 6 cut(s) 298, 316, 317, 474, 475, 566
BmiI GGNNCC 4 cut(s) 318, 398, 475, 476
BmrFI CCNGG 4 cut(s) 79, 222, 255, 472
BmsI GCATC 1 cut(s) 538
BoxI GACNNNNGTC 1 cut(s) 172
BpmI CTGGAG 1 cut(s) 654
BpuMI CCSGG 1 cut(s) 472
Bsa29I ATCGAT 1 cut(s) 442
BsaAI YACGTR 2 cut(s) 547, 859
BsaBI GATNNNNATC 1 cut(s) 653
BsaI GGTCTC 1 cut(s) 870
BsaJI CCNNGG 6 cut(s) 220, 253, 312, 471, 644, 753
BsaWI WCCGGW 4 cut(s) 200, 341, 371, 532
BsaXI ACNNNNNCTCC 4 cut(s) 73, 103, 223, 253
Bsc4I CCNNNNNNNGG 4 cut(s) 200, 314, 431, 494
Bse118I RCCGGY 4 cut(s) 200, 262, 295, 487
Bse8I GATNNNNATC 1 cut(s) 653
BseAI TCCGGA 1 cut(s) 532
BseBI CCWGG 3 cut(s) 79, 222, 255
BseCI ATCGAT 1 cut(s) 442
BseDI CCNNGG 6 cut(s) 220, 253, 312, 471, 644, 753
BseGI GGATG 2 cut(s) 529, 763
BseJI GATNNNNATC 1 cut(s) 653
BseLI CCNNNNNNNGG 4 cut(s) 200, 314, 431, 494
BseMII CTCAG 1 cut(s) 270
BseRI GAGGAG 1 cut(s) 110
BseSI GKGCMC 2 cut(s) 320, 478
BseX3I CGGCCG 1 cut(s) 782
BseYI CCCAGC 1 cut(s) 319
Bsh1285I CGRYCG 3 cut(s) 250, 492, 785
BshFI GGCC 4 cut(s) 299, 318, 476, 784
BshTI ACCGGT 1 cut(s) 200
BshVI ATCGAT 1 cut(s) 442
BsiEI CGRYCG 3 cut(s) 250, 492, 785
BsiHKAI GWGCWC 2 cut(s) 219, 552
BsiSI CCGG 9 cut(s) 201, 212, 263, 296, 342, 372, 471, 488, 533
BslFI GGGAC 1 cut(s) 750
BslI CCNNNNNNNGG 4 cut(s) 200, 314, 431, 494
BsmAI GTCTC 4 cut(s) 243, 276, 429, 870
BsmFI GGGAC 1 cut(s) 750
BsnI GGCC 4 cut(s) 299, 318, 476, 784
Bso31I GGTCTC 1 cut(s) 870
Bsp120I GGGCCC 2 cut(s) 316, 474
Bsp1286I GDGCHC 4 cut(s) 219, 320, 478, 552
Bsp13I TCCGGA 1 cut(s) 532
Bsp143I GATC 8 cut(s) 247, 361, 403, 443, 648, 654, 673, 955
BspACI CCGC 5 cut(s) 209, 485, 522, 583, 611
BspANI GGCC 4 cut(s) 299, 318, 476, 784
BspCNI CTCAG 1 cut(s) 271
BspDI ATCGAT 1 cut(s) 442
BspEI TCCGGA 1 cut(s) 532
BspLI GGNNCC 4 cut(s) 318, 398, 475, 476
BspPI GGATC 2 cut(s) 656, 950
BspTNI GGTCTC 1 cut(s) 870
BsrFI RCCGGY 4 cut(s) 200, 262, 295, 487
BssAI RCCGGY 4 cut(s) 200, 262, 295, 487
BssECI CCNNGG 6 cut(s) 220, 253, 312, 471, 644, 753
BssMI GATC 8 cut(s) 247, 361, 403, 443, 648, 654, 673, 955
BssT1I CCWWGG 2 cut(s) 644, 753
Bst2UI CCWGG 3 cut(s) 79, 222, 255
Bst4CI ACNGT 2 cut(s) 171, 795
BstBAI YACGTR 2 cut(s) 547, 859
BstC8I GCNNGC 4 cut(s) 227, 260, 264, 722
BstDEI CTNAG 2 cut(s) 279, 681
BstF5I GGATG 2 cut(s) 529, 763
BstH2I RGCGCY 2 cut(s) 269, 623
BstHHI GCGC 2 cut(s) 268, 622
BstKTI GATC 8 cut(s) 250, 364, 406, 446, 651, 657, 676, 958
BstMAI GTCTC 4 cut(s) 243, 276, 429, 870
BstMBI GATC 8 cut(s) 247, 361, 403, 443, 648, 654, 673, 955
BstMCI CGRYCG 3 cut(s) 250, 492, 785
BstMWI GCNNNNNNNGC 2 cut(s) 296, 619
BstNI CCWGG 3 cut(s) 79, 222, 255
BstPAI GACNNNNGTC 1 cut(s) 172
BstSCI CCNGG 4 cut(s) 77, 220, 253, 470
BstSLI GKGCMC 2 cut(s) 320, 478
BstX2I RGATCY 2 cut(s) 673, 955
BstYI RGATCY 2 cut(s) 673, 955
BstZI CGGCCG 1 cut(s) 782
Bsu15I ATCGAT 1 cut(s) 442
BsuRI GGCC 4 cut(s) 299, 318, 476, 784
BsuTUI ATCGAT 1 cut(s) 442
BtsCI GGATG 2 cut(s) 529, 763
BtsI GCAGTG 1 cut(s) 160
BtsIMutI CAGTG 1 cut(s) 160
Cac8I GCNNGC 4 cut(s) 227, 260, 264, 722
CfoI GCGC 2 cut(s) 268, 622
Cfr10I RCCGGY 4 cut(s) 200, 262, 295, 487
Cfr13I GGNCC 6 cut(s) 298, 316, 317, 474, 475, 566
ClaI ATCGAT 1 cut(s) 442
CseI GACGC 2 cut(s) 241, 894
CspAI ACCGGT 1 cut(s) 200
CviAII CATG 1 cut(s) 161
DdeI CTNAG 2 cut(s) 279, 681
DpnI GATC 8 cut(s) 249, 363, 405, 445, 650, 656, 675, 957
DpnII GATC 8 cut(s) 247, 361, 403, 443, 648, 654, 673, 955
EaeI YGGCCR 1 cut(s) 782
EagI CGGCCG 1 cut(s) 782
EciI GGCGGA 3 cut(s) 198, 474, 600
Ecl136II GAGCTC 1 cut(s) 217
EclXI CGGCCG 1 cut(s) 782
Eco130I CCWWGG 2 cut(s) 644, 753
Eco24I GRGCYC 3 cut(s) 219, 320, 478
Eco31I GGTCTC 1 cut(s) 870
Eco47I GGWCC 1 cut(s) 566
Eco47III AGCGCT 1 cut(s) 621
Eco52I CGGCCG 1 cut(s) 782
Eco53kI GAGCTC 1 cut(s) 217
Eco57I CTGAAG 1 cut(s) 930
Eco72I CACGTG 1 cut(s) 859
EcoICRI GAGCTC 1 cut(s) 217
EcoO109I RGGNCCY 3 cut(s) 316, 474, 475
EcoRII CCWGG 3 cut(s) 77, 220, 253
EcoT14I CCWWGG 2 cut(s) 644, 753
EcoT38I GRGCYC 3 cut(s) 219, 320, 478
ErhI CCWWGG 2 cut(s) 644, 753
FaeI CATG 1 cut(s) 164
FalI AAGNNNNNCTT 2 cut(s) 945, 977
FaqI GGGAC 1 cut(s) 750
FatI CATG 1 cut(s) 160
FauI CCCGC 1 cut(s) 590
FokI GGATG 2 cut(s) 516, 770
FriOI GRGCYC 3 cut(s) 219, 320, 478
FspBI CTAG 3 cut(s) 287, 411, 506
GlaI GCGC 2 cut(s) 267, 621
GsaI CCCAGC 1 cut(s) 323
GsuI CTGGAG 1 cut(s) 654
HaeII RGCGCY 2 cut(s) 269, 623
HaeIII GGCC 4 cut(s) 299, 318, 476, 784
HapII CCGG 9 cut(s) 201, 212, 263, 296, 342, 372, 471, 488, 533
HgaI GACGC 2 cut(s) 241, 894
HhaI GCGC 2 cut(s) 268, 622
Hin1II CATG 1 cut(s) 164
Hin6I GCGC 2 cut(s) 266, 620
HinP1I GCGC 2 cut(s) 266, 620
HincII GTYRAC 2 cut(s) 75, 867
HindII GTYRAC 2 cut(s) 75, 867
HindIII AAGCTT 1 cut(s) 36
HinfI GANTC 6 cut(s) 71, 82, 98, 125, 481, 863
HpaII CCGG 9 cut(s) 201, 212, 263, 296, 342, 372, 471, 488, 533
HphI GGTGA 2 cut(s) 93, 285
Hpy166II GTNNAC 5 cut(s) 7, 75, 158, 635, 867
Hpy188I TCNGA 8 cut(s) 191, 247, 280, 313, 361, 408, 434, 910
Hpy188III TCNNGA 5 cut(s) 506, 533, 652, 671, 728
Hpy8I GTNNAC 5 cut(s) 7, 75, 158, 635, 867
Hpy99I CGWCG 2 cut(s) 235, 466
HpyAV CCTTC 3 cut(s) 17, 64, 512
HpyCH4III ACNGT 2 cut(s) 171, 795
HpyCH4IV ACGT 4 cut(s) 516, 546, 858, 939
HpyCH4V TGCA 5 cut(s) 136, 529, 557, 836, 933
HpyF10VI GCNNNNNNNGC 2 cut(s) 296, 619
HpyF3I CTNAG 2 cut(s) 279, 681
HpySE526I ACGT 4 cut(s) 516, 546, 858, 939
Hsp92II CATG 1 cut(s) 164
HspAI GCGC 2 cut(s) 266, 620
Kpn2I TCCGGA 1 cut(s) 532
KroI GCCGGC 1 cut(s) 262
KroNI GCCGGC 1 cut(s) 264
Kzo9I GATC 8 cut(s) 247, 361, 403, 443, 648, 654, 673, 955
LmnI GCTCC 5 cut(s) 214, 222, 374, 419, 847
LweI GCATC 1 cut(s) 538
MaeI CTAG 3 cut(s) 287, 411, 506
MaeII ACGT 4 cut(s) 516, 546, 858, 939
MaeIII GTNAC 3 cut(s) 99, 517, 748
MalI GATC 8 cut(s) 249, 363, 405, 445, 650, 656, 675, 957
MboI GATC 8 cut(s) 247, 361, 403, 443, 648, 654, 673, 955
MboII GAAGA 3 cut(s) 443, 668, 923
MflI RGATCY 2 cut(s) 673, 955
MhlI GDGCHC 4 cut(s) 219, 320, 478, 552
MluCI AATT 1 cut(s) 538
MlyI GAGTC 6 cut(s) 80, 91, 107, 134, 475, 872
MmeI TCCRAC 1 cut(s) 362
MnlI CCTC 8 cut(s) 88, 143, 301, 307, 623, 678, 928, 969
MreI CGCCGGCG 1 cut(s) 262
MroI TCCGGA 1 cut(s) 532
MroNI GCCGGC 1 cut(s) 262
MroXI GAANNNNTTC 1 cut(s) 941
MseI TTAA 2 cut(s) 428, 771
MspA1I CMGCKG 1 cut(s) 969
MspI CCGG 9 cut(s) 201, 212, 263, 296, 342, 372, 471, 488, 533
MspR9I CCNGG 4 cut(s) 79, 222, 255, 472
MvaI CCWGG 3 cut(s) 79, 222, 255
MwoI GCNNNNNNNGC 2 cut(s) 296, 619
NaeI GCCGGC 1 cut(s) 264
NciI CCSGG 1 cut(s) 472
NdeII GATC 8 cut(s) 247, 361, 403, 443, 648, 654, 673, 955
NgoMIV GCCGGC 1 cut(s) 262
NlaIII CATG 1 cut(s) 164
NlaIV GGNNCC 4 cut(s) 318, 398, 475, 476
NmuCI GTSAC 2 cut(s) 99, 517
PcsI WCGNNNNNNNCGW 2 cut(s) 239, 945
PdiI GCCGGC 1 cut(s) 264
PdmI GAANNNNTTC 1 cut(s) 941
PflFI GACNNNGTC 1 cut(s) 235
PinAI ACCGGT 1 cut(s) 200
Ple19I CGATCG 1 cut(s) 250
PleI GAGTC 6 cut(s) 79, 90, 106, 133, 475, 871
PmaCI CACGTG 1 cut(s) 859
PmlI CACGTG 1 cut(s) 859
PpsI GAGTC 6 cut(s) 79, 90, 106, 133, 475, 871
Ppu21I YACGTR 2 cut(s) 547, 859
PshAI GACNNNNGTC 1 cut(s) 172
PshBI ATTAAT 1 cut(s) 428
Psp124BI GAGCTC 1 cut(s) 219
Psp6I CCWGG 3 cut(s) 77, 220, 253
PspCI CACGTG 1 cut(s) 859
PspFI CCCAGC 1 cut(s) 319
PspGI CCWGG 3 cut(s) 77, 220, 253
PspN4I GGNNCC 4 cut(s) 318, 398, 475, 476
PspOMI GGGCCC 2 cut(s) 316, 474
PspPI GGNCC 6 cut(s) 298, 316, 317, 474, 475, 566
PsuI RGATCY 2 cut(s) 673, 955
PsyI GACNNNGTC 1 cut(s) 235
PvuI CGATCG 1 cut(s) 250
PvuII CAGCTG 1 cut(s) 969
SacI GAGCTC 1 cut(s) 219
SaqAI TTAA 2 cut(s) 428, 771
Sau3AI GATC 8 cut(s) 247, 361, 403, 443, 648, 654, 673, 955
Sau96I GGNCC 6 cut(s) 298, 316, 317, 474, 475, 566
SchI GAGTC 6 cut(s) 80, 91, 107, 134, 475, 872
ScrFI CCNGG 4 cut(s) 79, 222, 255, 472
SduI GDGCHC 4 cut(s) 219, 320, 478, 552
SfaNI GCATC 1 cut(s) 538
SgrAI CRCCGGYG 1 cut(s) 262
SinI GGWCC 1 cut(s) 566
Sse9I AATT 1 cut(s) 538
SsiI CCGC 5 cut(s) 209, 485, 522, 583, 611
SspMI CTAG 3 cut(s) 287, 411, 506
SstI GAGCTC 1 cut(s) 219
StyD4I CCNGG 4 cut(s) 77, 220, 253, 470
StyI CCWWGG 2 cut(s) 644, 753
TaaI ACNGT 2 cut(s) 171, 795
TaiI ACGT 4 cut(s) 519, 549, 861, 942
TaqI TCGA 2 cut(s) 442, 687
TasI AATT 1 cut(s) 538
Tru1I TTAA 2 cut(s) 428, 771
Tru9I TTAA 2 cut(s) 428, 771
TscAI CASTG 1 cut(s) 160
TseFI GTSAC 2 cut(s) 99, 517
Tsp45I GTSAC 2 cut(s) 99, 517
TspDTI ATGAA 1 cut(s) 692
TspGWI ACGGA 5 cut(s) 231, 264, 297, 579, 888
TspRI CASTG 1 cut(s) 160
Tth111I GACNNNGTC 1 cut(s) 235
VpaK11BI GGWCC 1 cut(s) 566
VspI ATTAAT 1 cut(s) 428
XbaI TCTAGA 1 cut(s) 505
XmnI GAANNNNTTC 1 cut(s) 941
XspI CTAG 3 cut(s) 287, 411, 506
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.