Rorug05G0129700

Protein of unknown function (DUF295)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000064
Physical Location & Seq
Reverse (-)
11513782 .. 11514588
807 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0129700.1

Sequence Viewer

Length: 807 bp
ATGTCGTCTCAGTTCTCCCTGGCCAAGCTCCGCAAGGCCACCAGAAACTTCTCTACGGATAATGTCATTGGAACTGGGAGGAGCGGCCTGATCTACAAGGCCAAGCTCTCCAATGGACTCACCGTCGCCATCAAGAACTACGACCCCGATCGATTCCAAGGCTTTAGGGAATTCCGGGCTGAAGCCGAAGCTCTAGGCCAGCTTCGACACCCAAATATCGTTAAGCTTTTGAGTTATCAGGCGTCCGGCTCAGTTATGCTTCTTGTTTATGAGTACGTAGAGAGAGGTACCCTTTCCACACGTCTTCATGATTCACGCTCTTTTTCATGGCTAGACAAGTTAAAGATTATTAGGGGTGTAGCTGATGTTCTCGCTTATTTGCATGGGTTGAAAAACCCAGTAATTCATAGAGACATTTCGTCTAGAAATGTGCTACTGGACTCGGACAATGAGGCGCGTATTATTAATTTTGGGCTTTCTAGGACTATTGACAAGTCTCATTCGCTTTCGCATGTGTCAACCGGACCGGCTGGGTCCATACCGTACATGGCGCCGGAGTATAGGAGTGGGAGCACCAAAGCCACGGTGAAAGGCGACGTGTATAGCTTTGGCATTTTAATGCTGGAGACTGCAATGGAATCTAGAGATTGTAGTAGAGACGTCGATAATGTAGAATGGGTCAGAGGTGCGAAGTTGGACGAAATTATATACGGGTTTGAGGTCGATGCACAGTGGCCCGAGTATATTCGGATCGCCTTATATTGTGCATTTGTGCTAGTAGATATCCAGAAGACCGGCCTCAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295

Protein Analysis

268

Amino Acids

30.08

Weight (kDa)

9.1

Isoelectric Point (pI)

23.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 18 - 220 3.7e-37 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 19 - 227 4.7e-40 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000064)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04090 FvH4_1g04091 FvH4_1g04110 FvH4_1g04440 FvH4_1g05330 FvH4_1g05332 FvH4_1g05560 FvH4_1g05580 FvH4_1g05590 FvH4_1g05611 FvH4_1g05892 FvH4_1g05900 FvH4_1g06763 FvH4_1g17860 FvH4_1g17860 FvH4_1g17861 FvH4_1g17880 FvH4_1g17902 FvH4_2g08142 FvH4_2g25110 FvH4_2g34380 FvH4_3g19131 FvH4_3g20501 FvH4_4g02770 FvH4_4g02771 FvH4_4g17610 FvH4_4g26951 FvH4_4g28330 FvH4_4g29110 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29690 FvH4_4g29691 FvH4_4g30221 FvH4_4g30230 FvH4_4g30240 FvH4_4g30602 FvH4_4g30610 FvH4_6g01351 FvH4_6g01780 FvH4_6g01890 FvH4_6g47150 FvH4_6g52260 FvH4_6g52703 FvH4_7g23210 FvH4_7g23240 FvH4_7g23350 FvH4_7g28790 FvH4_7g28820 FvH4_7g28830 FvH4_7g28840 FvH4_7g28890 FvH4_7g29040 FvH4_7g29050 FvH4_7g29990 FvH4_7g33871 FvH4_c6g00090
malus_domestica MD01G1180800.v1.1 MD01G1199400.v1.1 MD02G1310000.v1.1 MD04G1097400.v1.1 MD07G1264800.v1.1 MD07G1264900.v1.1 MD07G1270200.v1.1 MD07G1270300.v1.1 MD07G1270500.v1.1 MD10G1043600.v1.1 MD13G1047500.v1.1 MD13G1075200.v1.1
prunus_persica Prupe.1G009400_v2.0.a1 Prupe.1G076100_v2.0.a1 Prupe.1G158300_v2.0.a1 Prupe.1G208900_v2.0.a1 Prupe.1G273900_v2.0.a1 Prupe.2G253900_v2.0.a1 Prupe.2G255700_v2.0.a1 Prupe.2G256000_v2.0.a1 Prupe.2G280300_v2.0.a1 Prupe.2G290700_v2.0.a1 Prupe.3G068500_v2.0.a1 Prupe.4G112800_v2.0.a1 Prupe.5G168600_v2.0.a1 Prupe.5G168800_v2.0.a1 Prupe.5G169100_v2.0.a1 Prupe.8G049800_v2.0.a1
pyrus_communis pycom01g19330 pycom01g20930 pycom01g22010 pycom01g22020 pycom02g26090 pycom07g24330 pycom07g24720 pycom13g04150 pycom420g01320
rosa_chinensis RchiOBHm_Chr1g0324121 RchiOBHm_Chr1g0324251 RchiOBHm_Chr1g0343741 RchiOBHm_Chr1g0355031 RchiOBHm_Chr1g0359461 RchiOBHm_Chr1g0376351 RchiOBHm_Chr1g0376381 RchiOBHm_Chr2g0092531 RchiOBHm_Chr2g0108311 RchiOBHm_Chr2g0108321 RchiOBHm_Chr2g0108331 RchiOBHm_Chr2g0133991 RchiOBHm_Chr2g0156691 RchiOBHm_Chr2g0173801 RchiOBHm_Chr3g0449701 RchiOBHm_Chr3g0449861 RchiOBHm_Chr4g0417201 RchiOBHm_Chr4g0417931 RchiOBHm_Chr4g0424551 RchiOBHm_Chr4g0442921 RchiOBHm_Chr4g0442931 RchiOBHm_Chr5g0032171 RchiOBHm_Chr5g0032191 RchiOBHm_Chr5g0032221 RchiOBHm_Chr6g0258051 RchiOBHm_Chr6g0277851 RchiOBHm_Chr6g0291671 RchiOBHm_Chr6g0291691 RchiOBHm_Chr6g0312761 RchiOBHm_Chr7g0223801 RchiOBHm_Chr7g0224141
rosa_laevigata RLG00000001917 RLG00000001951 RLG00000005804 RLG00000006309 RLG00000006344 RLG00000006458 RLG00000016168 RLG00000016259 RLG00000016305 RLG00000016306 RLG00000019810 RLG00000022223 RLG00000026077 RLG00000026607 RLG00000029703 RLG00000033364 RLG00000034633 RLG00000034637
rosa_multiflora Rmu_co8010764.1_g000001 Rmu_co8262143.1_g000001 Rmu_co8346175.1_g000001 Rmu_sc0000096.1_g000016 Rmu_sc0000544.1_g000003 Rmu_sc0000591.1_g000007 Rmu_sc0000756.1_g000029 Rmu_sc0000841.1_g000017 Rmu_sc0000907.1_g000020 Rmu_sc0000954.1_g000004 Rmu_sc0001195.1_g000007 Rmu_sc0001198.1_g000008 Rmu_sc0001201.1_g000011 Rmu_sc0001201.1_g000013 Rmu_sc0001782.1_g000035 Rmu_sc0001904.1_g000004 Rmu_sc0001962.1_g000039 Rmu_sc0002113.1_g000021 Rmu_sc0002226.1_g000017 Rmu_sc0002226.1_g000020 Rmu_sc0002327.1_g000005 Rmu_sc0002372.1_g000010 Rmu_sc0002372.1_g000014 Rmu_sc0002687.1_g000005 Rmu_sc0003031.1_g000019 Rmu_sc0003076.1_g000014 Rmu_sc0004296.1_g000009 Rmu_sc0004540.1_g000009 Rmu_sc0005369.1_g000002 Rmu_sc0005375.1_g000003 Rmu_sc0005375.1_g000013 Rmu_sc0005742.1_g000008 Rmu_sc0005742.1_g000015 Rmu_sc0005742.1_g000021 Rmu_sc0007419.1_g000011 Rmu_sc0008909.1_g000008 Rmu_sc0010556.1_g000018 Rmu_sc0010999.1_g000008 Rmu_sc0017510.1_g000003 Rmu_sc0017556.1_g000001 Rmu_sc0017900.1_g000007 Rmu_sc0024249.1_g000001 Rmu_sc0032377.1_g000001 Rmu_sc0033569.1_g000001 Rmu_sc0036457.1_g000001 Rmu_sc0041304.1_g000001 Rmu_ssc0000204.1_g000011 Rmu_ssc0000438.1_g000056
rosa_roxburghii Rroxscaffold_1G00048250 Rroxscaffold_1G00048290 Rroxscaffold_2G00092800 Rroxscaffold_2G00110580 Rroxscaffold_2G00135240 Rroxscaffold_2G00135260 Rroxscaffold_2G00135300 Rroxscaffold_2G00149010 Rroxscaffold_2G00149160 Rroxscaffold_2G00149170 Rroxscaffold_2G00149630 Rroxscaffold_2G00151760 Rroxscaffold_2G00151790 Rroxscaffold_2G00152170 Rroxscaffold_3G00225510 Rroxscaffold_3G00249210 Rroxscaffold_4G00277020 Rroxscaffold_4G00281760 Rroxscaffold_4G00281770 Rroxscaffold_4G00281810 Rroxscaffold_4G00281820 Rroxscaffold_4G00282160 Rroxscaffold_4G00310340 Rroxscaffold_5G00361040 Rroxscaffold_5G00363770 Rroxscaffold_5G00366460 Rroxscaffold_5G00378270 Rroxscaffold_5G00378310 Rroxscaffold_5G00379550 Rroxscaffold_5G00379650 Rroxscaffold_6G00422110 Rroxscaffold_6G00427680 Rroxscaffold_7G00175850 Rroxscaffold_7G00175860 Rroxscaffold_7G00190720 Rroxscaffold_7G00190750 Rroxscaffold_7G00190830 Rroxscaffold_7G00196820
rosa_rugosa Rorug01G0395900 Rorug01G0444400 Rorug01G0488100 Rorug02G0001700 Rorug02G0021600 Rorug02G0025700 Rorug02G0152200 Rorug02G0271300 Rorug02G0455800 Rorug02G0572800 Rorug02G0576000 Rorug04G0146300 Rorug04G0172200 Rorug04G0172400 Rorug04G0311300 Rorug04G0312200 Rorug04G0312300 Rorug05G0129500 Rorug05G0129700 Rorug05G0250600 Rorug06G0112600 Rorug06G0220700 Rorug06G0220800 Rorug07G0114600
rosa_samantha Rh1DG066700 Rh1DG081800 Rh1DG184300 Rh1DG401900 Rh1DG402700 Rh1DG407000 Rh1DG407600 Rh2AG200800 Rh2AG201000 Rh2AG521000 Rh2BG066200 Rh2BG066300 Rh2BG073900 Rh2BG373500 Rh2BG417600 Rh2BG662600 Rh2DG066200 Rh2DG072000 Rh2DG390000 Rh2DG677700 Rh3CG020200 Rh3CG021500 Rh3CG081200 Rh4AG209600 Rh4AG362600 Rh4AG362700 Rh4AG397200 Rh4BG209800 Rh4BG209900 Rh4BG210000 Rh4CG220800 Rh4CG271300 Rh4CG388000 Rh4DG029800 Rh4DG368700 Rh4DG403900 Rh5AG035900 Rh5BG034600 Rh5BG034900 Rh5DG228700 Rh5DG228800 Rh6AG355900 Rh6CG083600 Rh6CG229000 Rh6CG229100 Rh6CG229700 Rh6CG346500 Rh6CG346600 Rh7AG362300 Rh7AG362400 Rh7AG363200 Rh7AG365100 Rh7CG380900 Rh7CG381000 Rh7CG381600 Rh7DG437600
rosa_wichuraiana Rw0G004580 Rw0G004590 Rw0G005750 Rw0G006640 Rw0G007050 Rw0G008040 Rw0G012200 Rw0G013750 Rw0G016590 Rw1G006090 Rw1G012040 Rw1G036130 Rw1G036270 Rw1G036290 Rw1G036420 Rw1G036430 Rw1G036590 Rw2G003560 Rw2G005130 Rw2G005980 Rw2G006090 Rw2G015980 Rw2G016000 Rw2G043010 Rw2G053520 Rw4G018760 Rw4G022000 Rw4G034250 Rw5G003280 Rw5G020380 Rw5G020390 Rw6G008210 Rw6G031000 Rw7G030830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 663
Acc65I GGTACC 1 cut(s) 287
AccB1I GGYRCC 2 cut(s) 287, 550
AccBSI CCGCTC 1 cut(s) 84
AccII CGCG 1 cut(s) 457
AciI CCGC 2 cut(s) 31, 84
AclWI GGATC 1 cut(s) 758
AcoI YGGCCR 1 cut(s) 21
AcsI RAATTY 1 cut(s) 170
AcuI CTGAAG 1 cut(s) 201
AcyI GRCGYC 3 cut(s) 242, 551, 660
AfaI GTAC 3 cut(s) 275, 289, 545
AflIII ACRYGT 2 cut(s) 299, 597
AgsI TTSAA 1 cut(s) 391
AhdI GACNNNNNGTC 2 cut(s) 122, 418
AjiI CACGTC 2 cut(s) 302, 598
AjnI CCWGG 1 cut(s) 18
AluBI AGCT 7 cut(s) 28, 106, 191, 202, 226, 362, 606
AluI AGCT 7 cut(s) 28, 106, 191, 202, 226, 362, 606
Alw21I GWGCWC 1 cut(s) 575
Alw26I GTCTC 5 cut(s) 12, 405, 501, 620, 651
AlwI GGATC 1 cut(s) 758
Ama87I CYCGRG 1 cut(s) 737
AoxI GGCC 7 cut(s) 21, 36, 85, 99, 196, 734, 796
ApoI RAATTY 1 cut(s) 170
AseI ATTAAT 1 cut(s) 465
Asp718I GGTACC 1 cut(s) 287
AspLEI GCGC 2 cut(s) 457, 553
AspS9I GGNCC 3 cut(s) 524, 534, 735
AsuC2I CCSGG 1 cut(s) 176
AsuHPI GGTGA 2 cut(s) 112, 598
AvaI CYCGRG 1 cut(s) 737
AvaII GGWCC 2 cut(s) 524, 534
BalI TGGCCA 1 cut(s) 23
BanI GGYRCC 2 cut(s) 287, 550
BbsI GAAGAC 2 cut(s) 296, 797
Bbv12I GWGCWC 1 cut(s) 575
BccI CCATC 1 cut(s) 137
BciT130I CCWGG 1 cut(s) 20
BcnI CCSGG 1 cut(s) 176
BcoDI GTCTC 5 cut(s) 12, 405, 501, 620, 651
BfaI CTAG 6 cut(s) 194, 332, 423, 480, 642, 776
BfoI RGCGCY 1 cut(s) 554
BisI GCNGC 1 cut(s) 85
BlsI GCNGC 1 cut(s) 86
Bme1390I CCNGG 2 cut(s) 20, 176
Bme18I GGWCC 2 cut(s) 524, 534
BmeRI GACNNNNNGTC 2 cut(s) 122, 418
BmeT110I CYCGRG 1 cut(s) 737
BmgBI CACGTC 2 cut(s) 302, 598
BmgT120I GGNCC 3 cut(s) 524, 534, 735
BmiI GGNNCC 3 cut(s) 289, 535, 552
BmrFI CCNGG 2 cut(s) 20, 176
BmrI ACTGGG 2 cut(s) 84, 392
BmsI GCATC 1 cut(s) 715
BmuI ACTGGG 2 cut(s) 84, 392
BpiI GAAGAC 2 cut(s) 296, 797
BpmI CTGGAG 1 cut(s) 644
BpuMI CCSGG 1 cut(s) 176
Bsa29I ATCGAT 1 cut(s) 151
BsaAI YACGTR 1 cut(s) 277
BsaHI GRCGYC 3 cut(s) 242, 551, 660
BsaJI CCNNGG 3 cut(s) 18, 157, 582
BsaWI WCCGGW 1 cut(s) 521
Bse118I RCCGGY 2 cut(s) 526, 794
Bse1I ACTGG 3 cut(s) 79, 398, 441
Bse3DI GCAATG 1 cut(s) 639
BseBI CCWGG 1 cut(s) 20
BseCI ATCGAT 1 cut(s) 151
BseDI CCNNGG 3 cut(s) 18, 157, 582
BseMI GCAATG 1 cut(s) 639
BseMII CTCAG 2 cut(s) 23, 264
BseNI ACTGG 3 cut(s) 79, 398, 441
BseRI GAGGAG 1 cut(s) 94
BseYI CCCAGC 1 cut(s) 530
Bsh1236I CGCG 1 cut(s) 457
Bsh1285I CGRYCG 1 cut(s) 151
BshFI GGCC 7 cut(s) 23, 38, 87, 101, 198, 736, 798
BshNI GGYRCC 2 cut(s) 287, 550
BshVI ATCGAT 1 cut(s) 151
BsiEI CGRYCG 1 cut(s) 151
BsiHKAI GWGCWC 1 cut(s) 575
BsiHKCI CYCGRG 1 cut(s) 737
BsiSI CCGG 6 cut(s) 175, 246, 522, 527, 554, 795
BsmAI GTCTC 5 cut(s) 12, 405, 501, 620, 651
BsmBI CGTCTC 2 cut(s) 12, 651
BsnI GGCC 7 cut(s) 23, 38, 87, 101, 198, 736, 798
BsoBI CYCGRG 1 cut(s) 737
Bsp1286I GDGCHC 1 cut(s) 575
Bsp143I GATC 3 cut(s) 90, 148, 750
BspACI CCGC 2 cut(s) 31, 84
BspANI GGCC 7 cut(s) 23, 38, 87, 101, 198, 736, 798
BspCNI CTCAG 2 cut(s) 22, 263
BspDI ATCGAT 1 cut(s) 151
BspFNI CGCG 1 cut(s) 457
BspHI TCATGA 1 cut(s) 307
BspLI GGNNCC 3 cut(s) 289, 535, 552
BspPI GGATC 1 cut(s) 758
BspT107I GGYRCC 2 cut(s) 287, 550
BsrBI CCGCTC 1 cut(s) 84
BsrDI GCAATG 1 cut(s) 639
BsrFI RCCGGY 2 cut(s) 526, 794
BsrI ACTGG 3 cut(s) 79, 398, 441
BssAI RCCGGY 2 cut(s) 526, 794
BssECI CCNNGG 3 cut(s) 18, 157, 582
BssMI GATC 3 cut(s) 90, 148, 750
BssNI GRCGYC 3 cut(s) 242, 551, 660
BssT1I CCWWGG 1 cut(s) 157
Bst2UI CCWGG 1 cut(s) 20
Bst4CI ACNGT 4 cut(s) 124, 543, 586, 732
BstACI GRCGYC 3 cut(s) 242, 551, 660
BstBAI YACGTR 1 cut(s) 277
BstC8I GCNNGC 1 cut(s) 200
BstDEI CTNAG 3 cut(s) 9, 250, 800
BstDSI CCRYGG 1 cut(s) 582
BstFNI CGCG 1 cut(s) 457
BstH2I RGCGCY 1 cut(s) 554
BstHHI GCGC 2 cut(s) 457, 553
BstKTI GATC 3 cut(s) 93, 151, 753
BstMAI GTCTC 5 cut(s) 12, 405, 501, 620, 651
BstMBI GATC 3 cut(s) 90, 148, 750
BstMCI CGRYCG 1 cut(s) 151
BstNI CCWGG 1 cut(s) 20
BstNSI RCATGY 1 cut(s) 515
BstSCI CCNGG 2 cut(s) 18, 174
BstSNI TACGTA 1 cut(s) 277
BstUI CGCG 1 cut(s) 457
BstV2I GAAGAC 2 cut(s) 296, 797
Bsu15I ATCGAT 1 cut(s) 151
BsuRI GGCC 7 cut(s) 23, 38, 87, 101, 198, 736, 798
BsuTUI ATCGAT 1 cut(s) 151
BtgI CCRYGG 1 cut(s) 582
BtrI CACGTC 2 cut(s) 302, 598
BtsIMutI CAGTG 1 cut(s) 737
Cac8I GCNNGC 1 cut(s) 200
CciI TCATGA 1 cut(s) 307
CfoI GCGC 2 cut(s) 457, 553
Cfr10I RCCGGY 2 cut(s) 526, 794
Cfr13I GGNCC 3 cut(s) 524, 534, 735
ClaI ATCGAT 1 cut(s) 151
CpoI CGGWCCG 1 cut(s) 524
CseI GACGC 1 cut(s) 231
Csp6I GTAC 3 cut(s) 274, 288, 544
CspI CGGWCCG 1 cut(s) 524
CviAII CATG 5 cut(s) 308, 327, 383, 512, 547
CviQI GTAC 3 cut(s) 274, 288, 544
DdeI CTNAG 3 cut(s) 9, 250, 800
DinI GGCGCC 1 cut(s) 552
DpnI GATC 3 cut(s) 92, 150, 752
DpnII GATC 3 cut(s) 90, 148, 750
DriI GACNNNNNGTC 2 cut(s) 122, 418
EaeI YGGCCR 1 cut(s) 21
Eam1105I GACNNNNNGTC 2 cut(s) 122, 418
Eco105I TACGTA 1 cut(s) 277
Eco130I CCWWGG 1 cut(s) 157
Eco32I GATATC 1 cut(s) 784
Eco47I GGWCC 2 cut(s) 524, 534
Eco57I CTGAAG 1 cut(s) 201
Eco88I CYCGRG 1 cut(s) 737
EcoRI GAATTC 1 cut(s) 170
EcoRII CCWGG 1 cut(s) 18
EcoRV GATATC 1 cut(s) 784
EcoT14I CCWWGG 1 cut(s) 157
EgeI GGCGCC 1 cut(s) 552
EheI GGCGCC 1 cut(s) 552
ErhI CCWWGG 1 cut(s) 157
Esp3I CGTCTC 2 cut(s) 12, 651
FaeI CATG 5 cut(s) 311, 330, 386, 515, 550
FatI CATG 5 cut(s) 307, 326, 382, 511, 546
Fnu4HI GCNGC 1 cut(s) 85
Fsp4HI GCNGC 1 cut(s) 85
FspBI CTAG 6 cut(s) 194, 332, 423, 480, 642, 776
GlaI GCGC 2 cut(s) 456, 552
GluI GCNGC 1 cut(s) 85
GsaI CCCAGC 1 cut(s) 534
GsuI CTGGAG 1 cut(s) 644
HaeII RGCGCY 1 cut(s) 554
HaeIII GGCC 7 cut(s) 23, 38, 87, 101, 198, 736, 798
HapII CCGG 6 cut(s) 175, 246, 522, 527, 554, 795
HgaI GACGC 1 cut(s) 231
HhaI GCGC 2 cut(s) 457, 553
Hin1I GRCGYC 3 cut(s) 242, 551, 660
Hin1II CATG 5 cut(s) 311, 330, 386, 515, 550
Hin6I GCGC 2 cut(s) 455, 551
HinP1I GCGC 2 cut(s) 455, 551
HincII GTYRAC 1 cut(s) 519
HindII GTYRAC 1 cut(s) 519
HindIII AAGCTT 1 cut(s) 224
HinfI GANTC 5 cut(s) 117, 153, 311, 440, 638
HpaII CCGG 6 cut(s) 175, 246, 522, 527, 554, 795
HphI GGTGA 2 cut(s) 112, 598
Hpy166II GTNNAC 1 cut(s) 519
Hpy188I TCNGA 4 cut(s) 445, 683, 750, 803
Hpy188III TCNNGA 5 cut(s) 133, 308, 423, 642, 787
Hpy8I GTNNAC 1 cut(s) 519
Hpy99I CGWCG 3 cut(s) 128, 599, 665
HpyCH4III ACNGT 4 cut(s) 124, 543, 586, 732
HpyCH4IV ACGT 4 cut(s) 276, 301, 597, 660
HpyCH4V TGCA 4 cut(s) 382, 632, 728, 767
HpyF3I CTNAG 3 cut(s) 9, 250, 800
HpySE526I ACGT 4 cut(s) 276, 301, 597, 660
Hsp92I GRCGYC 3 cut(s) 242, 551, 660
Hsp92II CATG 5 cut(s) 311, 330, 386, 515, 550
HspAI GCGC 2 cut(s) 455, 551
KasI GGCGCC 1 cut(s) 550
KpnI GGTACC 1 cut(s) 291
Kzo9I GATC 3 cut(s) 90, 148, 750
LmnI GCTCC 3 cut(s) 33, 81, 570
LweI GCATC 1 cut(s) 715
MaeI CTAG 6 cut(s) 194, 332, 423, 480, 642, 776
MaeII ACGT 4 cut(s) 276, 301, 597, 660
MalI GATC 3 cut(s) 92, 150, 752
MbiI CCGCTC 1 cut(s) 84
MboI GATC 3 cut(s) 90, 148, 750
MboII GAAGA 2 cut(s) 296, 802
MhlI GDGCHC 1 cut(s) 575
MlsI TGGCCA 1 cut(s) 23
MluCI AATT 4 cut(s) 170, 402, 466, 702
MluNI TGGCCA 1 cut(s) 23
Mly113I GGCGCC 1 cut(s) 551
MlyI GAGTC 2 cut(s) 111, 434
MmeI TCCRAC 1 cut(s) 675
MnlI CCTC 5 cut(s) 72, 278, 445, 677, 712
Mox20I TGGCCA 1 cut(s) 23
MscI TGGCCA 1 cut(s) 23
MseI TTAA 4 cut(s) 222, 341, 465, 617
MslI CAYNNNNRTG 1 cut(s) 617
Msp20I TGGCCA 1 cut(s) 23
MspI CCGG 6 cut(s) 175, 246, 522, 527, 554, 795
MspR9I CCNGG 2 cut(s) 20, 176
MvaI CCWGG 1 cut(s) 20
MvnI CGCG 1 cut(s) 457
NarI GGCGCC 1 cut(s) 551
NciI CCSGG 1 cut(s) 176
NdeII GATC 3 cut(s) 90, 148, 750
NlaIII CATG 5 cut(s) 311, 330, 386, 515, 550
NlaIV GGNNCC 3 cut(s) 289, 535, 552
NspI RCATGY 1 cut(s) 515
PagI TCATGA 1 cut(s) 307
PfeI GAWTC 3 cut(s) 153, 311, 638
PkrI GCNGC 1 cut(s) 86
Ple19I CGATCG 1 cut(s) 151
PleI GAGTC 2 cut(s) 111, 434
PluTI GGCGCC 1 cut(s) 554
PpsI GAGTC 2 cut(s) 111, 434
Ppu21I YACGTR 1 cut(s) 277
PshBI ATTAAT 1 cut(s) 465
Psp6I CCWGG 1 cut(s) 18
PspFI CCCAGC 1 cut(s) 530
PspGI CCWGG 1 cut(s) 18
PspN4I GGNNCC 3 cut(s) 289, 535, 552
PspPI GGNCC 3 cut(s) 524, 534, 735
PsrI GAACNNNNNNTAC 2 cut(s) 351, 383
PvuI CGATCG 1 cut(s) 151
RsaI GTAC 3 cut(s) 275, 289, 545
RsaNI GTAC 3 cut(s) 274, 288, 544
RseI CAYNNNNRTG 1 cut(s) 617
Rsr2I CGGWCCG 1 cut(s) 524
RsrII CGGWCCG 1 cut(s) 524
SaqAI TTAA 4 cut(s) 222, 341, 465, 617
SatI GCNGC 1 cut(s) 85
Sau3AI GATC 3 cut(s) 90, 148, 750
Sau96I GGNCC 3 cut(s) 524, 534, 735
SchI GAGTC 2 cut(s) 111, 434
ScrFI CCNGG 2 cut(s) 20, 176
SduI GDGCHC 1 cut(s) 575
SfaNI GCATC 1 cut(s) 715
SfoI GGCGCC 1 cut(s) 552
SinI GGWCC 2 cut(s) 524, 534
SmiMI CAYNNNNRTG 1 cut(s) 617
SnaBI TACGTA 1 cut(s) 277
Sse9I AATT 4 cut(s) 170, 402, 466, 702
SsiI CCGC 2 cut(s) 31, 84
SspDI GGCGCC 1 cut(s) 550
SspMI CTAG 6 cut(s) 194, 332, 423, 480, 642, 776
StyD4I CCNGG 2 cut(s) 18, 174
StyI CCWWGG 1 cut(s) 157
TaaI ACNGT 4 cut(s) 124, 543, 586, 732
TaiI ACGT 4 cut(s) 279, 304, 600, 663
TaqI TCGA 4 cut(s) 151, 205, 663, 723
TasI AATT 4 cut(s) 170, 402, 466, 702
TauI GCSGC 1 cut(s) 87
TfiI GAWTC 3 cut(s) 153, 311, 638
Tru1I TTAA 4 cut(s) 222, 341, 465, 617
Tru9I TTAA 4 cut(s) 222, 341, 465, 617
TscAI CASTG 1 cut(s) 737
TspDTI ATGAA 3 cut(s) 296, 315, 395
TspGWI ACGGA 1 cut(s) 71
TspRI CASTG 1 cut(s) 737
VpaK11BI GGWCC 2 cut(s) 524, 534
VspI ATTAAT 1 cut(s) 465
XapI RAATTY 1 cut(s) 170
XbaI TCTAGA 2 cut(s) 422, 641
XceI RCATGY 1 cut(s) 515
XcmI CCANNNNNNNNNTGG 1 cut(s) 544
XspI CTAG 6 cut(s) 194, 332, 423, 480, 642, 776
ZraI GACGTC 1 cut(s) 661
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.