RchiOBHm_Chr2g0173801

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000064
Physical Location & Seq
Forward (+)
86663528 .. 86664715
1188 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ54099

Sequence Viewer

Length: 1188 bp
ATGATTCTTGATAAGTTGTTCGAACCCACCGACCATCTTTCTTTCGCTAGGGTTTGCAAAGATTGGTGCTCTATTTCAAGAAACTATAATATTGCAACTCAACGCTGGCACAAGAAGGGCAAGTTGCTTCCCCTTTTCTTGGTAAGTACTGAATCCGAATCGACAGGAAAGACTACCAACCATGAACTCGAAGCATATAACGTTTCTAGTGGAAAAAGATGTTACGATAATATTCATTTTCCGGTCACTCATGGAAAGAGGTGTTGTGGTTCTAGCCATGGTTGGTTGGCCATATTAGATATAGAAGGCATATGTCTCTCCATAACTCTGGTGCACCCTTTCCAAAAATCAGTGGAAGCCATCAAACTCCCTCTTTTGGATTTCATGACGACCAAGTCGTTGCAGTACTATGACATTAACCACTTAAAGAACACCTACCAAGAATACATTCGAAAGGTTATCTTGTCCTCCGATCCCATCTTGAATCGGGATAATTATGTTGTTGTTGTGCTCTACGGTTATGGTGGTTCAAAGTTGGCTTTCATCAAAGGAGGACAACAAAGATGGACTTATCCCGATAGGCGTCAAAGCTGCCTTAAGGATGCCATATTTTATAGAAACCAAGTTTATGCAGTTGGCGGAGGCGATGGAAATGAAAAAATCCTCTCATTTGATGTTAATAGTTGTAATAAACCTTCAAAGCCTCCAAAAGCAAACCAGCGTACGCCTAATAATGTCCTAAAAAAATGCGCTGCTAGTTCATATCTTGTGGAATCAGTCGAGGGAGACCACCTATGGCATGTTAGAAGACTAGTTTCTTATTCAAGGAGAGCCGATAAGTACATTGAGAGGTTTATGGTTTACAAGGTGGCGTTTGAGGACAAAGATGGATCGGTTGTGGAACAAGTAGAGGTACAAAGCATCGGAGACGAGACTCTGTTTGTGGGTGCATCTCATTCAATAGCCATCCTGGCTTCGAACTTTCCTGGGTGTAAGCCAAATTCCATATACTATGCCACAGAGGAGCCGTATTGTTTTGGAGATCCGGACCACAAAACCTATCATATATCTAGTCTAGATGATGGAACCATCACGGAATATCAGCAAAACCTACGCCGGCATCCAAGTTTACATTTAGGAATTCCATGTGGAGTTTGGATTCTACCAATGTTTAAGGGACTATTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295 F-box F-box-like

Protein Analysis

395

Amino Acids

44.96

Weight (kDa)

8.57

Isoelectric Point (pI)

49.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_KIB1-4 PF03478 70 - 348 2.7e-46 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000064)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04090 FvH4_1g04091 FvH4_1g04110 FvH4_1g04440 FvH4_1g05330 FvH4_1g05332 FvH4_1g05560 FvH4_1g05580 FvH4_1g05590 FvH4_1g05611 FvH4_1g05892 FvH4_1g05900 FvH4_1g06763 FvH4_1g17860 FvH4_1g17860 FvH4_1g17861 FvH4_1g17880 FvH4_1g17902 FvH4_2g08142 FvH4_2g25110 FvH4_2g34380 FvH4_3g19131 FvH4_3g20501 FvH4_4g02770 FvH4_4g02771 FvH4_4g17610 FvH4_4g26951 FvH4_4g28330 FvH4_4g29110 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29690 FvH4_4g29691 FvH4_4g30221 FvH4_4g30230 FvH4_4g30240 FvH4_4g30602 FvH4_4g30610 FvH4_6g01351 FvH4_6g01780 FvH4_6g01890 FvH4_6g47150 FvH4_6g52260 FvH4_6g52703 FvH4_7g23210 FvH4_7g23240 FvH4_7g23350 FvH4_7g28790 FvH4_7g28820 FvH4_7g28830 FvH4_7g28840 FvH4_7g28890 FvH4_7g29040 FvH4_7g29050 FvH4_7g29990 FvH4_7g33871 FvH4_c6g00090
malus_domestica MD01G1180800.v1.1 MD01G1199400.v1.1 MD02G1310000.v1.1 MD04G1097400.v1.1 MD07G1264800.v1.1 MD07G1264900.v1.1 MD07G1270200.v1.1 MD07G1270300.v1.1 MD07G1270500.v1.1 MD10G1043600.v1.1 MD13G1047500.v1.1 MD13G1075200.v1.1
prunus_persica Prupe.1G009400_v2.0.a1 Prupe.1G076100_v2.0.a1 Prupe.1G158300_v2.0.a1 Prupe.1G208900_v2.0.a1 Prupe.1G273900_v2.0.a1 Prupe.2G253900_v2.0.a1 Prupe.2G255700_v2.0.a1 Prupe.2G256000_v2.0.a1 Prupe.2G280300_v2.0.a1 Prupe.2G290700_v2.0.a1 Prupe.3G068500_v2.0.a1 Prupe.4G112800_v2.0.a1 Prupe.5G168600_v2.0.a1 Prupe.5G168800_v2.0.a1 Prupe.5G169100_v2.0.a1 Prupe.8G049800_v2.0.a1
pyrus_communis pycom01g19330 pycom01g20930 pycom01g22010 pycom01g22020 pycom02g26090 pycom07g24330 pycom07g24720 pycom13g04150 pycom420g01320
rosa_chinensis RchiOBHm_Chr1g0324121 RchiOBHm_Chr1g0324251 RchiOBHm_Chr1g0343741 RchiOBHm_Chr1g0355031 RchiOBHm_Chr1g0359461 RchiOBHm_Chr1g0376351 RchiOBHm_Chr1g0376381 RchiOBHm_Chr2g0092531 RchiOBHm_Chr2g0108311 RchiOBHm_Chr2g0108321 RchiOBHm_Chr2g0108331 RchiOBHm_Chr2g0133991 RchiOBHm_Chr2g0156691 RchiOBHm_Chr2g0173801 RchiOBHm_Chr3g0449701 RchiOBHm_Chr3g0449861 RchiOBHm_Chr4g0417201 RchiOBHm_Chr4g0417931 RchiOBHm_Chr4g0424551 RchiOBHm_Chr4g0442921 RchiOBHm_Chr4g0442931 RchiOBHm_Chr5g0032171 RchiOBHm_Chr5g0032191 RchiOBHm_Chr5g0032221 RchiOBHm_Chr6g0258051 RchiOBHm_Chr6g0277851 RchiOBHm_Chr6g0291671 RchiOBHm_Chr6g0291691 RchiOBHm_Chr6g0312761 RchiOBHm_Chr7g0223801 RchiOBHm_Chr7g0224141
rosa_laevigata RLG00000001917 RLG00000001951 RLG00000005804 RLG00000006309 RLG00000006344 RLG00000006458 RLG00000016168 RLG00000016259 RLG00000016305 RLG00000016306 RLG00000019810 RLG00000022223 RLG00000026077 RLG00000026607 RLG00000029703 RLG00000033364 RLG00000034633 RLG00000034637
rosa_multiflora Rmu_co8010764.1_g000001 Rmu_co8262143.1_g000001 Rmu_co8346175.1_g000001 Rmu_sc0000096.1_g000016 Rmu_sc0000544.1_g000003 Rmu_sc0000591.1_g000007 Rmu_sc0000756.1_g000029 Rmu_sc0000841.1_g000017 Rmu_sc0000907.1_g000020 Rmu_sc0000954.1_g000004 Rmu_sc0001195.1_g000007 Rmu_sc0001198.1_g000008 Rmu_sc0001201.1_g000011 Rmu_sc0001201.1_g000013 Rmu_sc0001782.1_g000035 Rmu_sc0001904.1_g000004 Rmu_sc0001962.1_g000039 Rmu_sc0002113.1_g000021 Rmu_sc0002226.1_g000017 Rmu_sc0002226.1_g000020 Rmu_sc0002327.1_g000005 Rmu_sc0002372.1_g000010 Rmu_sc0002372.1_g000014 Rmu_sc0002687.1_g000005 Rmu_sc0003031.1_g000019 Rmu_sc0003076.1_g000014 Rmu_sc0004296.1_g000009 Rmu_sc0004540.1_g000009 Rmu_sc0005369.1_g000002 Rmu_sc0005375.1_g000003 Rmu_sc0005375.1_g000013 Rmu_sc0005742.1_g000008 Rmu_sc0005742.1_g000015 Rmu_sc0005742.1_g000021 Rmu_sc0007419.1_g000011 Rmu_sc0008909.1_g000008 Rmu_sc0010556.1_g000018 Rmu_sc0010999.1_g000008 Rmu_sc0017510.1_g000003 Rmu_sc0017556.1_g000001 Rmu_sc0017900.1_g000007 Rmu_sc0024249.1_g000001 Rmu_sc0032377.1_g000001 Rmu_sc0033569.1_g000001 Rmu_sc0036457.1_g000001 Rmu_sc0041304.1_g000001 Rmu_ssc0000204.1_g000011 Rmu_ssc0000438.1_g000056
rosa_roxburghii Rroxscaffold_1G00048250 Rroxscaffold_1G00048290 Rroxscaffold_2G00092800 Rroxscaffold_2G00110580 Rroxscaffold_2G00135240 Rroxscaffold_2G00135260 Rroxscaffold_2G00135300 Rroxscaffold_2G00149010 Rroxscaffold_2G00149160 Rroxscaffold_2G00149170 Rroxscaffold_2G00149630 Rroxscaffold_2G00151760 Rroxscaffold_2G00151790 Rroxscaffold_2G00152170 Rroxscaffold_3G00225510 Rroxscaffold_3G00249210 Rroxscaffold_4G00277020 Rroxscaffold_4G00281760 Rroxscaffold_4G00281770 Rroxscaffold_4G00281810 Rroxscaffold_4G00281820 Rroxscaffold_4G00282160 Rroxscaffold_4G00310340 Rroxscaffold_5G00361040 Rroxscaffold_5G00363770 Rroxscaffold_5G00366460 Rroxscaffold_5G00378270 Rroxscaffold_5G00378310 Rroxscaffold_5G00379550 Rroxscaffold_5G00379650 Rroxscaffold_6G00422110 Rroxscaffold_6G00427680 Rroxscaffold_7G00175850 Rroxscaffold_7G00175860 Rroxscaffold_7G00190720 Rroxscaffold_7G00190750 Rroxscaffold_7G00190830 Rroxscaffold_7G00196820
rosa_rugosa Rorug01G0395900 Rorug01G0444400 Rorug01G0488100 Rorug02G0001700 Rorug02G0021600 Rorug02G0025700 Rorug02G0152200 Rorug02G0271300 Rorug02G0455800 Rorug02G0572800 Rorug02G0576000 Rorug04G0146300 Rorug04G0172200 Rorug04G0172400 Rorug04G0311300 Rorug04G0312200 Rorug04G0312300 Rorug05G0129500 Rorug05G0129700 Rorug05G0250600 Rorug06G0112600 Rorug06G0220700 Rorug06G0220800 Rorug07G0114600
rosa_samantha Rh1DG066700 Rh1DG081800 Rh1DG184300 Rh1DG401900 Rh1DG402700 Rh1DG407000 Rh1DG407600 Rh2AG200800 Rh2AG201000 Rh2AG521000 Rh2BG066200 Rh2BG066300 Rh2BG073900 Rh2BG373500 Rh2BG417600 Rh2BG662600 Rh2DG066200 Rh2DG072000 Rh2DG390000 Rh2DG677700 Rh3CG020200 Rh3CG021500 Rh3CG081200 Rh4AG209600 Rh4AG362600 Rh4AG362700 Rh4AG397200 Rh4BG209800 Rh4BG209900 Rh4BG210000 Rh4CG220800 Rh4CG271300 Rh4CG388000 Rh4DG029800 Rh4DG368700 Rh4DG403900 Rh5AG035900 Rh5BG034600 Rh5BG034900 Rh5DG228700 Rh5DG228800 Rh6AG355900 Rh6CG083600 Rh6CG229000 Rh6CG229100 Rh6CG229700 Rh6CG346500 Rh6CG346600 Rh7AG362300 Rh7AG362400 Rh7AG363200 Rh7AG365100 Rh7CG380900 Rh7CG381000 Rh7CG381600 Rh7DG437600
rosa_wichuraiana Rw0G004580 Rw0G004590 Rw0G005750 Rw0G006640 Rw0G007050 Rw0G008040 Rw0G012200 Rw0G013750 Rw0G016590 Rw1G006090 Rw1G012040 Rw1G036130 Rw1G036270 Rw1G036290 Rw1G036420 Rw1G036430 Rw1G036590 Rw2G003560 Rw2G005130 Rw2G005980 Rw2G006090 Rw2G015980 Rw2G016000 Rw2G043010 Rw2G053520 Rw4G018760 Rw4G022000 Rw4G034250 Rw5G003280 Rw5G020380 Rw5G020390 Rw6G008210 Rw6G031000 Rw7G030830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 394
AccIII TCCGGA 1 cut(s) 1045
AciI CCGC 1 cut(s) 639
AclI AACGTT 1 cut(s) 201
AclWI GGATC 3 cut(s) 467, 898, 1037
AcoI YGGCCR 1 cut(s) 288
AcsI RAATTY 2 cut(s) 1000, 1140
AcyI GRCGYC 1 cut(s) 583
AfaI GTAC 5 cut(s) 148, 407, 724, 842, 915
AfiI CCNNNNNNNGG 2 cut(s) 139, 376
AflII CTTAAG 1 cut(s) 596
AgsI TTSAA 6 cut(s) 78, 484, 531, 699, 825, 960
AhlI ACTAGT 1 cut(s) 811
AjnI CCWGG 2 cut(s) 969, 985
AjuI GAANNNNNNNTTGG 2 cut(s) 432, 464
AluBI AGCT 1 cut(s) 591
AluI AGCT 1 cut(s) 591
Alw21I GWGCWC 3 cut(s) 71, 336, 513
Alw26I GTCTC 4 cut(s) 320, 780, 921, 926
Alw44I GTGCAC 1 cut(s) 332
AlwI GGATC 3 cut(s) 467, 898, 1037
Aor13HI TCCGGA 1 cut(s) 1045
AoxI GGCC 1 cut(s) 288
ApaLI GTGCAC 1 cut(s) 332
ApeKI GCWGC 2 cut(s) 591, 752
ApoI RAATTY 2 cut(s) 1000, 1140
Asp700I GAANNNNTTC 1 cut(s) 447
AspLEI GCGC 1 cut(s) 752
AspS9I GGNCC 1 cut(s) 1048
AsuII TTCGAA 3 cut(s) 21, 451, 977
AvaII GGWCC 1 cut(s) 1048
BaeGI GKGCMC 1 cut(s) 336
BalI TGGCCA 1 cut(s) 290
BarI GAAGNNNNNNTAC 2 cut(s) 679, 711
BbsI GAAGAC 1 cut(s) 814
Bbv12I GWGCWC 3 cut(s) 71, 336, 513
BbvI GCAGC 2 cut(s) 578, 739
BccI CCATC 9 cut(s) 42, 368, 485, 558, 641, 881, 974, 1076, 1097
BceAI ACGGC 1 cut(s) 1012
BciT130I CCWGG 2 cut(s) 971, 987
BcoDI GTCTC 4 cut(s) 320, 780, 921, 926
BcuI ACTAGT 1 cut(s) 811
BfaI CTAG 8 cut(s) 48, 207, 273, 756, 812, 1071, 1076, 1186
BfrI CTTAAG 1 cut(s) 596
BglI GCCNNNNNGGC 1 cut(s) 971
BisI GCNGC 2 cut(s) 592, 753
BlsI GCNGC 2 cut(s) 593, 754
BmcAI AGTACT 2 cut(s) 148, 407
Bme1390I CCNGG 2 cut(s) 971, 987
Bme18I GGWCC 1 cut(s) 1048
BmgT120I GGNCC 1 cut(s) 1048
BmiI GGNNCC 2 cut(s) 1026, 1087
BmrFI CCNGG 2 cut(s) 971, 987
BmsI GCATC 4 cut(s) 592, 930, 959, 1129
BpiI GAAGAC 1 cut(s) 814
Bpu14I TTCGAA 3 cut(s) 21, 451, 977
BsaHI GRCGYC 1 cut(s) 583
BsaI GGTCTC 1 cut(s) 780
BsaJI CCNNGG 2 cut(s) 277, 986
BsaWI WCCGGW 2 cut(s) 241, 1045
Bsc4I CCNNNNNNNGG 2 cut(s) 139, 376
Bse118I RCCGGY 1 cut(s) 1116
BseAI TCCGGA 1 cut(s) 1045
BseBI CCWGG 2 cut(s) 971, 987
BseDI CCNNGG 2 cut(s) 277, 986
BseGI GGATG 3 cut(s) 607, 966, 1120
BseLI CCNNNNNNNGG 2 cut(s) 139, 376
BseRI GAGGAG 1 cut(s) 1037
BseSI GKGCMC 1 cut(s) 336
BseXI GCAGC 2 cut(s) 578, 739
BshFI GGCC 1 cut(s) 290
BsiHKAI GWGCWC 3 cut(s) 71, 336, 513
BsiSI CCGG 3 cut(s) 242, 1046, 1117
BsiWI CGTACG 1 cut(s) 722
BslI CCNNNNNNNGG 2 cut(s) 139, 376
BsmAI GTCTC 4 cut(s) 320, 780, 921, 926
BsmBI CGTCTC 1 cut(s) 921
BsnI GGCC 1 cut(s) 290
Bso31I GGTCTC 1 cut(s) 780
Bsp119I TTCGAA 3 cut(s) 21, 451, 977
Bsp1286I GDGCHC 3 cut(s) 71, 336, 513
Bsp13I TCCGGA 1 cut(s) 1045
Bsp143I GATC 3 cut(s) 472, 890, 1042
Bsp19I CCATGG 1 cut(s) 277
BspACI CCGC 1 cut(s) 639
BspANI GGCC 1 cut(s) 290
BspEI TCCGGA 1 cut(s) 1045
BspHI TCATGA 1 cut(s) 384
BspLI GGNNCC 2 cut(s) 1026, 1087
BspPI GGATC 3 cut(s) 467, 898, 1037
BspT104I TTCGAA 3 cut(s) 21, 451, 977
BspTI CTTAAG 1 cut(s) 596
BspTNI GGTCTC 1 cut(s) 780
BsrFI RCCGGY 1 cut(s) 1116
BssAI RCCGGY 1 cut(s) 1116
BssECI CCNNGG 2 cut(s) 277, 986
BssMI GATC 3 cut(s) 472, 890, 1042
BssNI GRCGYC 1 cut(s) 583
BssT1I CCWWGG 1 cut(s) 277
Bst2UI CCWGG 2 cut(s) 971, 987
Bst4CI ACNGT 1 cut(s) 518
BstACI GRCGYC 1 cut(s) 583
BstAFI CTTAAG 1 cut(s) 596
BstBI TTCGAA 3 cut(s) 21, 451, 977
BstC8I GCNNGC 2 cut(s) 107, 1118
BstDSI CCRYGG 1 cut(s) 277
BstF5I GGATG 3 cut(s) 607, 966, 1120
BstHHI GCGC 1 cut(s) 752
BstKTI GATC 3 cut(s) 475, 893, 1045
BstMAI GTCTC 4 cut(s) 320, 780, 921, 926
BstMBI GATC 3 cut(s) 472, 890, 1042
BstMWI GCNNNNNNNGC 1 cut(s) 971
BstNI CCWGG 2 cut(s) 971, 987
BstNSI RCATGY 1 cut(s) 803
BstSCI CCNGG 2 cut(s) 969, 985
BstSLI GKGCMC 1 cut(s) 336
BstV1I GCAGC 2 cut(s) 578, 739
BstV2I GAAGAC 1 cut(s) 814
BstX2I RGATCY 1 cut(s) 1042
BstXI CCANNNNNNTGG 1 cut(s) 328
BstYI RGATCY 1 cut(s) 1042
BsuRI GGCC 1 cut(s) 290
BtgI CCRYGG 1 cut(s) 277
BtgZI GCGATG 1 cut(s) 660
BtsCI GGATG 3 cut(s) 607, 966, 1120
BtsIMutI CAGTG 1 cut(s) 357
Cac8I GCNNGC 2 cut(s) 107, 1118
CciI TCATGA 1 cut(s) 384
CfoI GCGC 1 cut(s) 752
Cfr10I RCCGGY 1 cut(s) 1116
Cfr13I GGNCC 1 cut(s) 1048
CseI GACGC 1 cut(s) 572
Csp6I GTAC 5 cut(s) 147, 406, 723, 841, 914
CviAII CATG 6 cut(s) 182, 251, 278, 385, 800, 1146
CviQI GTAC 5 cut(s) 147, 406, 723, 841, 914
DpnI GATC 3 cut(s) 474, 892, 1044
DpnII GATC 3 cut(s) 472, 890, 1042
DrdI GACNNNNNNGTC 1 cut(s) 394
DseDI GACNNNNNNGTC 1 cut(s) 394
EaeI YGGCCR 1 cut(s) 288
EciI GGCGGA 1 cut(s) 654
Eco130I CCWWGG 1 cut(s) 277
Eco31I GGTCTC 1 cut(s) 780
Eco47I GGWCC 1 cut(s) 1048
EcoRI GAATTC 1 cut(s) 1140
EcoRII CCWGG 2 cut(s) 969, 985
EcoT14I CCWWGG 1 cut(s) 277
ErhI CCWWGG 1 cut(s) 277
Esp3I CGTCTC 1 cut(s) 921
FaeI CATG 6 cut(s) 185, 254, 281, 388, 803, 1149
FalI AAGNNNNNCTT 4 cut(s) 446, 478, 553, 585
FatI CATG 6 cut(s) 181, 250, 277, 384, 799, 1145
FauNDI CATATG 1 cut(s) 311
Fnu4HI GCNGC 2 cut(s) 592, 753
FokI GGATG 3 cut(s) 614, 953, 1107
Fsp4HI GCNGC 2 cut(s) 592, 753
FspBI CTAG 8 cut(s) 48, 207, 273, 756, 812, 1071, 1076, 1186
GlaI GCGC 1 cut(s) 751
GluI GCNGC 2 cut(s) 592, 753
HaeIII GGCC 1 cut(s) 290
HapII CCGG 3 cut(s) 242, 1046, 1117
HgaI GACGC 1 cut(s) 572
HhaI GCGC 1 cut(s) 752
Hin1I GRCGYC 1 cut(s) 583
Hin1II CATG 6 cut(s) 185, 254, 281, 388, 803, 1149
Hin6I GCGC 1 cut(s) 750
HinP1I GCGC 1 cut(s) 750
HinfI GANTC 7 cut(s) 4, 152, 158, 484, 773, 934, 1159
HpaII CCGG 3 cut(s) 242, 1046, 1117
Hpy166II GTNNAC 3 cut(s) 334, 862, 1130
Hpy188I TCNGA 3 cut(s) 157, 472, 926
Hpy188III TCNNGA 8 cut(s) 8, 78, 385, 481, 488, 575, 1046, 1076
Hpy8I GTNNAC 3 cut(s) 334, 862, 1130
HpyAV CCTTC 3 cut(s) 109, 299, 705
HpyCH4III ACNGT 1 cut(s) 518
HpyCH4IV ACGT 1 cut(s) 201
HpyCH4V TGCA 6 cut(s) 57, 95, 334, 403, 632, 950
HpyF10VI GCNNNNNNNGC 1 cut(s) 971
HpySE526I ACGT 1 cut(s) 201
Hsp92I GRCGYC 1 cut(s) 583
Hsp92II CATG 6 cut(s) 185, 254, 281, 388, 803, 1149
HspAI GCGC 1 cut(s) 750
Kpn2I TCCGGA 1 cut(s) 1045
KroI GCCGGC 1 cut(s) 1116
KroNI GCCGGC 1 cut(s) 1118
Kzo9I GATC 3 cut(s) 472, 890, 1042
LmnI GCTCC 1 cut(s) 1024
Lsp1109I GCAGC 2 cut(s) 578, 739
LweI GCATC 4 cut(s) 592, 930, 959, 1129
MaeI CTAG 8 cut(s) 48, 207, 273, 756, 812, 1071, 1076, 1186
MaeII ACGT 1 cut(s) 201
MaeIII GTNAC 2 cut(s) 221, 244
MalI GATC 3 cut(s) 474, 892, 1044
MboI GATC 3 cut(s) 472, 890, 1042
MboII GAAGA 1 cut(s) 819
MflI RGATCY 1 cut(s) 1042
MhlI GDGCHC 3 cut(s) 71, 336, 513
MlsI TGGCCA 1 cut(s) 290
MluCI AATT 3 cut(s) 493, 1000, 1140
MluNI TGGCCA 1 cut(s) 290
MlyI GAGTC 1 cut(s) 928
Mox20I TGGCCA 1 cut(s) 290
MroI TCCGGA 1 cut(s) 1045
MroNI GCCGGC 1 cut(s) 1116
MroXI GAANNNNTTC 1 cut(s) 447
MscI TGGCCA 1 cut(s) 290
MseI TTAA 5 cut(s) 417, 425, 597, 678, 1173
Msp20I TGGCCA 1 cut(s) 290
MspCI CTTAAG 1 cut(s) 596
MspI CCGG 3 cut(s) 242, 1046, 1117
MspR9I CCNGG 2 cut(s) 971, 987
MvaI CCWGG 2 cut(s) 971, 987
MwoI GCNNNNNNNGC 1 cut(s) 971
NaeI GCCGGC 1 cut(s) 1118
NcoI CCATGG 1 cut(s) 277
NdeI CATATG 1 cut(s) 311
NdeII GATC 3 cut(s) 472, 890, 1042
NgoMIV GCCGGC 1 cut(s) 1116
NlaIII CATG 6 cut(s) 185, 254, 281, 388, 803, 1149
NlaIV GGNNCC 2 cut(s) 1026, 1087
NmuCI GTSAC 1 cut(s) 244
NspI RCATGY 1 cut(s) 803
NspV TTCGAA 3 cut(s) 21, 451, 977
PagI TCATGA 1 cut(s) 384
PcsI WCGNNNNNNNCGW 2 cut(s) 27, 395
PdiI GCCGGC 1 cut(s) 1118
PdmI GAANNNNTTC 1 cut(s) 447
PfeI GAWTC 6 cut(s) 4, 152, 158, 484, 773, 1159
Pfl23II CGTACG 1 cut(s) 722
PflFI GACNNNGTC 1 cut(s) 394
PkrI GCNGC 2 cut(s) 593, 754
PleI GAGTC 1 cut(s) 928
PpsI GAGTC 1 cut(s) 928
Psp1406I AACGTT 1 cut(s) 201
Psp6I CCWGG 2 cut(s) 969, 985
PspGI CCWGG 2 cut(s) 969, 985
PspLI CGTACG 1 cut(s) 722
PspN4I GGNNCC 2 cut(s) 1026, 1087
PspPI GGNCC 1 cut(s) 1048
PsuI RGATCY 1 cut(s) 1042
PsyI GACNNNGTC 1 cut(s) 394
RsaI GTAC 5 cut(s) 148, 407, 724, 842, 915
RsaNI GTAC 5 cut(s) 147, 406, 723, 841, 914
SaqAI TTAA 5 cut(s) 417, 425, 597, 678, 1173
SatI GCNGC 2 cut(s) 592, 753
Sau3AI GATC 3 cut(s) 472, 890, 1042
Sau96I GGNCC 1 cut(s) 1048
ScaI AGTACT 2 cut(s) 148, 407
SchI GAGTC 1 cut(s) 928
ScrFI CCNGG 2 cut(s) 971, 987
SduI GDGCHC 3 cut(s) 71, 336, 513
SfaNI GCATC 4 cut(s) 592, 930, 959, 1129
SfuI TTCGAA 3 cut(s) 21, 451, 977
SinI GGWCC 1 cut(s) 1048
SmlI CTYRAG 1 cut(s) 596
SmoI CTYRAG 1 cut(s) 596
SpeI ACTAGT 1 cut(s) 811
Sse9I AATT 3 cut(s) 493, 1000, 1140
SsiI CCGC 1 cut(s) 639
SspI AATATT 2 cut(s) 91, 232
SspMI CTAG 8 cut(s) 48, 207, 273, 756, 812, 1071, 1076, 1186
StyD4I CCNGG 2 cut(s) 969, 985
StyI CCWWGG 1 cut(s) 277
TaaI ACNGT 1 cut(s) 518
TaiI ACGT 1 cut(s) 204
TaqI TCGA 6 cut(s) 21, 161, 189, 451, 780, 977
TasI AATT 3 cut(s) 493, 1000, 1140
TatI WGTACW 3 cut(s) 146, 405, 840
TfiI GAWTC 6 cut(s) 4, 152, 158, 484, 773, 1159
Tru1I TTAA 5 cut(s) 417, 425, 597, 678, 1173
Tru9I TTAA 5 cut(s) 417, 425, 597, 678, 1173
TscAI CASTG 1 cut(s) 357
TseFI GTSAC 1 cut(s) 244
TseI GCWGC 2 cut(s) 591, 752
Tsp45I GTSAC 1 cut(s) 244
TspDTI ATGAA 6 cut(s) 198, 224, 373, 532, 669, 750
TspGWI ACGGA 1 cut(s) 1109
TspRI CASTG 1 cut(s) 357
Tth111I GACNNNGTC 1 cut(s) 394
Vha464I CTTAAG 1 cut(s) 596
VneI GTGCAC 1 cut(s) 332
VpaK11BI GGWCC 1 cut(s) 1048
XapI RAATTY 2 cut(s) 1000, 1140
XbaI TCTAGA 1 cut(s) 1075
XceI RCATGY 1 cut(s) 803
XcmI CCANNNNNNNNNTGG 1 cut(s) 1152
XmnI GAANNNNTTC 1 cut(s) 447
XspI CTAG 8 cut(s) 48, 207, 273, 756, 812, 1071, 1076, 1186
ZrmI AGTACT 2 cut(s) 148, 407
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.